F367385

General Info

Members Datasets Scaffolds Average Seq Length
257 157 514 1041

Family's Representative Sequence

Representative Sequence 3300028381|Ga0268264_10011175|Ga0268264_100111753
Length 1086
Sequence MGWENRTFMTMSIQREKLQQHFQEEYRRLNEQQRLAVDTTEGPVMVIAGPGTGKTQILAARIGKILLDTDVSPDNILCLTYTDAGAIAMRRRLLTFIGPDAYKVNIHTFHSFCNDIIQENLSLFEKTSLDPISDLEKIQLFKTLIDNFPKNHPLKRYRGDVYFEMYNLQNLFSTMKREGWTPQWIGAKIDQYIADLPTRDEYIAKRATGNFKKGDVRTDKIAEETEKMEKLRAAVGEFDRFQELMRRRNRYDFDDMINWVIRAFEENKALLANYQERYQYILVDEYQDTSGTQNRLVSLLINYWDKPNVFVVGDDDQSIYRFQGANVENMLDFAHQYEKDLLTVVLTNNYRSTQPILDISRTLIDKNTERLVQQLPNLSKRLVSSHPLISTLKYPPHIIEYKDSRDEMTDITLHIERLVKEEGVPPGRIAVIYKENKYGEELAKFLKLKKIPVYSKRSLDLFEVPFAQKIILLLRYLAAEHDAPYGGDEMLFEILHFDFFSIAPIEVAKLSVEVADKQFSDERTSIRRLLHEKAARPARDLFDSGLPEGMKKASRALEKLIGDASNVTLQTLFENCIRDTGLLAYIIQSPEKVWLMQVLTALFDFIKEESRRDPDLNLERLVQTIDLMKDNGIPLPLIQVAGSDKAVNLLTAHGSKGLEFAYVFFAGCNASTWEKKRKPGGGYKYPDNLFDSRGPANGISGQTGPANDQGAVNGQTSKASDEEELRRLFYVALTRVEQHLFISYARYKTDGKELEPSVFIAEILDQHALEVKKVAVPEETMADFEVLTFTEDIIAPEIASAEEAFISRMLEKFVMNVTALNNYLKCPLEFYYKTLIRIPSPKNEATEFGSAVHFALQRLFEKMKAHVEERFPDKAEMLQDFNWYMHRHREIFTREAFARRMEYGIEVLGNYYDKYIYQWNKIVAVERNIRNVTVKGIPLKGKLDKLEFQGKEVNVVDYKTGDVDKAKDKLAPPSDKDPNGGDYWRQAVFYKILVDSYEQKDWKVVSTEFDFVEPDKKKEYRKAKITITPADITTVIQQIETTWKKIQNREFYTGCGRADCHWCNFVKTNNLAIALHTADDEVEEDA

Samples

Sample ID Description Type Environment
1 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
4 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
6 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
9 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
10 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
11 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
12 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
13 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
14 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
15 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
16 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
17 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
18 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
19 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
20 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
21 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
22 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
23 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
24 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
25 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
26 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
27 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
28 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
29 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
30 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
31 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
32 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
33 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
34 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
35 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
36 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
37 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
38 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
39 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
40 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
41 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
42 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
43 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
44 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
45 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
46 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
47 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
48 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
49 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
51 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
53 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
54 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
55 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
56 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
57 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
58 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
59 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
60 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
61 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
62 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
63 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
64 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
65 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
66 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
67 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
68 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
69 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
70 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
71 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
72 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
73 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
112 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
113 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
114 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
115 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
116 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
117 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
118 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
119 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
120 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
121 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
122 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
123 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
124 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
125 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
126 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
127 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
128 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
129 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
130 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
131 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
132 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
133 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
134 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
135 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
136 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049703 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control Metagenome Rhizosphere
143 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
145 3300050005 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought Metagenome Rhizosphere
146 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
147 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
148 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
149 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
150 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
151 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
152 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
153 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
154 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere
155 2738541278 Niastella sp. CF465 Isolate Unclassified
156 2818991444 Filimonas endophytica 3197 Isolate Unclassified
157 2929154850 Filimonas sp. R-72421 Hybrid assembly Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.83
Metatranscriptomes 0
Isolates 1.17

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.28
Nodule 0
Rhizoplane 0.39
Rhizosphere 91.44
Stem 0
Stem Tuber 0
Unclassified 1.17

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0268264_10011175 3300028381 Bacteria 7414
2 rootH2_10007161 3300003320 Bacteria 44535
3 JGI25160J50197_1003608 3300003354 Bacteria 6872
4 Ga0065715_10008177 3300005293 Bacteria 4153
5 Ga0065707_10086829 3300005295 Bacteria 5264
6 Ga0070676_10012487 3300005328 Bacteria 4639
7 Ga0070683_100001981 3300005329 Bacteria 16040
8 Ga0070683_100002633 3300005329 Bacteria 14348
9 Ga0070683_100018422 3300005329 Bacteria 6185
10 Ga0070666_10019394 3300005335 Bacteria 4389
11 Ga0070682_100000041 3300005337 Bacteria 142152
12 Ga0070682_100008995 3300005337 Bacteria 5643
13 Ga0068868_100003237 3300005338 Bacteria 11331
14 Ga0068868_100017209 3300005338 Bacteria 5380
15 Ga0068868_100034938 3300005338 Bacteria 3883
16 Ga0070660_100008792 3300005339 Bacteria 7074
17 Ga0070660_100043308 3300005339 Bacteria 3440
18 Ga0070689_100006347 3300005340 Bacteria 8169
19 Ga0070689_100015795 3300005340 Bacteria 5514
20 Ga0070691_10010460 3300005341 Bacteria 4234
21 Ga0070661_100002223 3300005344 Bacteria 13309
22 Ga0070668_100004302 3300005347 Bacteria 10567
23 Ga0070668_100046310 3300005347 Bacteria 3339
24 Ga0070669_100007009 3300005353 Bacteria 8101
25 Ga0070675_100008308 3300005354 Bacteria 8055
26 Ga0070675_100027972 3300005354 Unclassified 4534
27 Ga0070671_100004817 3300005355 Bacteria 10727
28 Ga0070671_100018227 3300005355 Bacteria 5699
29 Ga0070673_100000996 3300005364 Bacteria 16065
30 Ga0070673_100029208 3300005364 Bacteria 4110
31 Ga0070659_100003036 3300005366 Bacteria 11938
32 Ga0070667_100010943 3300005367 Bacteria 7504
33 Ga0070667_100018884 3300005367 Bacteria 5715
34 Ga0070701_10016385 3300005438 Bacteria 3445
35 Ga0070662_100008691 3300005457 Bacteria 6623
36 Ga0070681_10004855 3300005458 Bacteria 12895
37 Ga0070681_10018077 3300005458 Bacteria 7047
38 Ga0068867_100001595 3300005459 Bacteria 15758
39 Ga0070698_100002009 3300005471 Bacteria 22594
40 Ga0070679_100015550 3300005530 Bacteria 7312
41 Ga0070679_100017147 3300005530 Bacteria 7003
42 Ga0070684_100011378 3300005535 Bacteria 7088
43 Ga0068853_100007624 3300005539 Bacteria 8671
44 Ga0068853_100007735 3300005539 Bacteria 8618
45 Ga0068853_100012961 3300005539 Bacteria 6796
46 Ga0068853_100027331 3300005539 Bacteria 4793
47 Ga0070693_100010915 3300005547 Bacteria 4563
48 Ga0070665_100000002 3300005548 Bacteria 849037
49 Ga0070665_100003483 3300005548 Bacteria 16764
50 Ga0070664_100007908 3300005564 Bacteria 8589
51 Ga0068857_100006684 3300005577 Bacteria 9912
52 Ga0068857_100009430 3300005577 Bacteria 8471
53 Ga0068854_100015340 3300005578 Bacteria 5073
54 Ga0068854_100030789 3300005578 Bacteria 3724
55 Ga0068852_100006592 3300005616 Bacteria 8408
56 Ga0068852_100006600 3300005616 Bacteria 8402
57 Ga0068859_100000710 3300005617 Bacteria 33516
58 Ga0068859_100017648 3300005617 Bacteria 7174
59 Ga0068864_100002568 3300005618 Bacteria 14986
60 Ga0068861_100015445 3300005719 Bacteria 5382
61 Ga0068851_10002449 3300005834 Bacteria 8146
62 Ga0068858_100000982 3300005842 Bacteria 29441
63 Ga0068858_100027294 3300005842 Bacteria 5305
64 Ga0068860_100000003 3300005843 Bacteria 575741
65 Ga0068860_100003982 3300005843 Bacteria 15150
66 Ga0068860_100020935 3300005843 Bacteria 6337
67 Ga0068862_100017065 3300005844 Bacteria 6040
68 Ga0081539_10000925 3300005985 Bacteria 55202
69 Ga0081539_10004116 3300005985 Bacteria 16574
70 Ga0097621_100001710 3300006237 Bacteria 15004
71 Ga0097621_100037362 3300006237 Bacteria 3890
72 Ga0068871_100001825 3300006358 Bacteria 14369
73 Ga0068871_100010922 3300006358 Bacteria 6650
74 Ga0068871_100030530 3300006358 Bacteria 4244
75 Ga0068871_100035328 3300006358 Bacteria 3971
76 Ga0075430_100001443 3300006846 Bacteria 19293
77 Ga0097620_100000710 3300006931 Bacteria 33516
78 Ga0097620_100017647 3300006931 Bacteria 7174
79 Ga0105240_10000339 3300009093 Bacteria 87543
80 Ga0105240_10001189 3300009093 Bacteria 45474
81 Ga0105240_10003157 3300009093 Bacteria 25925
82 Ga0105240_10007738 3300009093 Bacteria 15544
83 Ga0105240_10107261 3300009093 Unclassified 3387
84 Ga0111539_10026669 3300009094 Bacteria 7062
85 Ga0105247_10003316 3300009101 Bacteria 10547
86 Ga0114129_10001062 3300009147 Bacteria 36084
87 Ga0114129_10028723 3300009147 Bacteria 7881
88 Ga0105241_10000620 3300009174 Bacteria 26735
89 Ga0105241_10002367 3300009174 Bacteria 14165
90 Ga0105248_10006218 3300009177 Bacteria 13091
91 Ga0105237_10000144 3300009545 Bacteria 100105
92 Ga0105237_10003556 3300009545 Bacteria 18468
93 Ga0105237_10010471 3300009545 Bacteria 9856
94 Ga0105237_10012545 3300009545 Bacteria 8927
95 Ga0105237_10015841 3300009545 Bacteria 7841
96 Ga0105238_10009750 3300009551 Bacteria 9617
97 Ga0105249_10003654 3300009553 Bacteria 13283
98 Ga0105249_10004335 3300009553 Bacteria 12272
99 Ga0105249_10025641 3300009553 Bacteria 5309
100 Ga0105239_10000925 3300010375 Bacteria 41596
101 Ga0105239_10003012 3300010375 Bacteria 20995
102 Ga0105239_10006497 3300010375 Bacteria 13557
103 Ga0105239_10009614 3300010375 Bacteria 10878
104 Ga0105239_10010003 3300010375 Bacteria 10638
105 Ga0157373_10005946 3300013100 Bacteria 9126
106 Ga0157370_10000419 3300013104 Bacteria 53608
107 Ga0157370_10012201 3300013104 Bacteria 8930
108 Ga0157370_10017606 3300013104 Bacteria 7206
109 Ga0157369_10015255 3300013105 Bacteria 8669
110 Ga0157374_10000013 3300013296 Bacteria 461240
111 Ga0157374_10004016 3300013296 Bacteria 12369
112 Ga0157374_10006626 3300013296 Bacteria 9842
113 Ga0157378_10005785 3300013297 Bacteria 10835
114 Ga0163162_10002021 3300013306 Bacteria 19084
115 Ga0163162_10008963 3300013306 Bacteria 9728
116 Ga0163162_10014014 3300013306 Bacteria 7836
117 Ga0163162_10025216 3300013306 Bacteria 5876
118 Ga0163162_10029143 3300013306 Bacteria 5461
119 Ga0157372_10000667 3300013307 Bacteria 37793
120 Ga0157372_10014311 3300013307 Bacteria 8482
121 Ga0157375_10003108 3300013308 Bacteria 14407
122 Ga0157375_10004642 3300013308 Bacteria 11942
123 Ga0157375_10020473 3300013308 Bacteria 6045
124 Ga0157375_10024882 3300013308 Bacteria 5550
125 Ga0163163_10003232 3300014325 Bacteria 13820
126 Ga0157380_10017086 3300014326 Bacteria 5363
127 Ga0157377_10001276 3300014745 Bacteria 10773
128 Ga0157377_10019068 3300014745 Bacteria 3579
129 Ga0157379_10015063 3300014968 Bacteria 6783
130 Ga0157376_10000349 3300014969 Bacteria 30853
131 Ga0157376_10000583 3300014969 Bacteria 23527
132 Ga0157376_10004049 3300014969 Bacteria 10138
133 Ga0157376_10023998 3300014969 Bacteria 4783
134 Ga0163161_10009910 3300017792 Bacteria 6601
135 Ga0163161_10015958 3300017792 Bacteria 5241
136 Ga0207426_1000059 3300025302 Bacteria 363842
137 Ga0207656_10000967 3300025321 Bacteria 9400
138 Ga0207710_10001493 3300025900 Bacteria 11571
139 Ga0207680_10011561 3300025903 Bacteria 4465
140 Ga0207647_10000064 3300025904 Bacteria 82970
141 Ga0207645_10002848 3300025907 Bacteria 13412
142 Ga0207643_10003884 3300025908 Bacteria 8038
143 Ga0207654_10008395 3300025911 Bacteria 5217
144 Ga0207707_10018450 3300025912 Bacteria 6083
145 Ga0207707_10029775 3300025912 Bacteria 4775
146 Ga0207695_10000056 3300025913 Bacteria 382433
147 Ga0207695_10000066 3300025913 Bacteria 334103
148 Ga0207695_10000469 3300025913 Bacteria 87551
149 Ga0207695_10006255 3300025913 Bacteria 15499
150 Ga0207695_10013417 3300025913 Bacteria 9772
151 Ga0207695_10017119 3300025913 Bacteria 8450
152 Ga0207695_10022437 3300025913 Bacteria 7163
153 Ga0207671_10001502 3300025914 Bacteria 26900
154 Ga0207671_10001511 3300025914 Bacteria 26769
155 Ga0207671_10022871 3300025914 Bacteria 4719
156 Ga0207660_10020067 3300025917 Bacteria 4480
157 Ga0207657_10019907 3300025919 Bacteria 6359
158 Ga0207649_10001925 3300025920 Bacteria 11845
159 Ga0207652_10008177 3300025921 Bacteria 8401
160 Ga0207694_10007537 3300025924 Bacteria 8247
161 Ga0207644_10019219 3300025931 Unclassified 4631
162 Ga0207706_10003583 3300025933 Bacteria 14828
163 Ga0207706_10059094 3300025933 Bacteria 3377
164 Ga0207686_10000812 3300025934 Bacteria 19072
165 Ga0207669_10016407 3300025937 Bacteria 3762
166 Ga0207704_10005411 3300025938 Bacteria 5887
167 Ga0207689_10007344 3300025942 Bacteria 9667
168 Ga0207689_10011755 3300025942 Bacteria 7503
169 Ga0207689_10013083 3300025942 Bacteria 7084
170 Ga0207689_10014898 3300025942 Bacteria 6597
171 Ga0207689_10022623 3300025942 Bacteria 5281
172 Ga0207661_10001213 3300025944 Bacteria 17235
173 Ga0207661_10027126 3300025944 Bacteria 4373
174 Ga0207679_10001006 3300025945 Bacteria 18102
175 Ga0207667_10012892 3300025949 Bacteria 9605
176 Ga0207668_10000337 3300025972 Bacteria 30364
177 Ga0207658_10002343 3300025986 Bacteria 13914
178 Ga0207677_10002943 3300026023 Bacteria 8993
179 Ga0207703_10002226 3300026035 Bacteria 17002
180 Ga0207639_10008621 3300026041 Bacteria 6997
181 Ga0207639_10012680 3300026041 Bacteria 5878
182 Ga0207678_10007708 3300026067 Bacteria 9510
183 Ga0207641_10005468 3300026088 Bacteria 10835
184 Ga0207641_10015914 3300026088 Bacteria 6159
185 Ga0207641_10032895 3300026088 Bacteria 4307
186 Ga0207648_10000215 3300026089 Bacteria 62218
187 Ga0207648_10006269 3300026089 Bacteria 11837
188 Ga0207676_10001609 3300026095 Bacteria 16628
189 Ga0207674_10008324 3300026116 Bacteria 12000
190 Ga0207674_10015368 3300026116 Bacteria 8410
191 Ga0207674_10018580 3300026116 Bacteria 7550
192 Ga0207674_10021832 3300026116 Bacteria 6889
193 Ga0207675_100000153 3300026118 Bacteria 60593
194 Ga0207675_100003678 3300026118 Bacteria 14949
195 Ga0207683_10007649 3300026121 Bacteria 9250
196 Ga0207683_10035394 3300026121 Bacteria 4342
197 Ga0207698_10032572 3300026142 Bacteria 3778
198 Ga0268266_10000073 3300028379 Bacteria 232074
199 Ga0268264_10000063 3300028381 Bacteria 301702
200 Ga0268264_10015977 3300028381 Bacteria 6150
201 Ga0307517_10008734 3300028786 Bacteria 14497
202 Ga0307515_10000001 3300028794 Bacteria 4259510
203 Ga0307511_10000181 3300030521 Bacteria 62420
204 Ga0265327_10000013 3300031251 Bacteria 519549
205 Ga0265327_10000452 3300031251 Bacteria 73846
206 Ga0265327_10005795 3300031251 Bacteria 10159
207 Ga0307516_10003216 3300031730 Bacteria 21192
208 Ga0307510_10000156 3300033180 Bacteria 56919
209 Ga0373937_0036577 3300036401 Bacteria 4474
210 Ga0436365_0188491 3300039437 Bacteria 6175
211 Ga0439457_000380 3300042014 Bacteria 12535
212 Ga0466969_0000190 3300044656 Bacteria 33133
213 Ga0466972_0000168 3300044658 Bacteria 51759
214 Ga0466972_0000676 3300044658 Bacteria 16399
215 Ga0466966_0004462 3300044684 Bacteria 9229
216 Ga0466968_0001851 3300044735 Bacteria 7645
217 Ga0466970_0001457 3300044765 Bacteria 11444
218 Ga0466957_0002034 3300044842 Bacteria 10786
219 Ga0466959_0000003 3300045049 Bacteria 285164
220 Ga0466959_0000488 3300045049 Bacteria 23122
221 Ga0495606_0006101 3300046507 Bacteria 11252
222 Ga0495630_0019246 3300046517 Bacteria 5018
223 Ga0495668_0000023 3300046616 Bacteria 363848
224 Ga0495611_0000061 3300046648 Bacteria 77533
225 Ga0495674_0058140 3300047319 Bacteria 3382
226 Ga0495672_0013289 3300047320 Bacteria 5687
227 Ga0495687_000040 3300047443 Bacteria 230786
228 Ga0495686_0018075 3300047472 Bacteria 4738
229 Ga0496101_0008503 3300048904 Bacteria 6709
230 Ga0501031_0006812 3300049568 Bacteria 7456
231 Ga0501034_0000004 3300049571 Bacteria 382255
232 Ga0501034_0006158 3300049571 Bacteria 12935
233 Ga0501036_0001446 3300049572 Bacteria 18239
234 Ga0501036_0037631 3300049572 Bacteria 4093
235 Ga0501037_0004345 3300049573 Bacteria 10286
236 Ga0501037_0024815 3300049573 Bacteria 4432
237 Ga0501038_0003270 3300049574 Bacteria 15111
238 Ga0501038_0027388 3300049574 Bacteria 5071
239 Ga0501043_0003849 3300049579 Bacteria 12332
240 Ga0501219_000166 3300049703 Bacteria 12148
241 Ga0501035_0023603 3300049822 Bacteria 5643
242 Ga0501044_0010038 3300049823 Bacteria 10290
243 Ga0501044_0011695 3300049823 Bacteria 9508
244 Ga0501284_00001 3300050005 Bacteria 261916
245 nmdc:mga05p37_482_c1 3300050507 Bacteria 43621
246 Ga0500578_0001568 3300053086 Bacteria 22320
247 Ga0500583_0000019 3300053092 Bacteria 130534
248 Ga0500562_000034 3300053108 Bacteria 83634
249 Ga0500642_0004161 3300053130 Bacteria 4483
250 Ga0500568_0000208 3300053139 Bacteria 51266
251 Ga0500616_0005798 3300053153 Bacteria 8293
252 Ga0500622_0001414 3300053156 Bacteria 19338
253 Ga0500622_0002343 3300053156 Bacteria 13790
254 Ga0500611_000001 3300053727 Bacteria 385744
255 2738725029 2738541278 Bacteria 9755573
256 2819585586 2818991444 Bacteria 6968812
257 2929159737 2929154850 Bacteria 6753285
258 Ga0268264_10011175
259 rootH2_10007161
260 JGI25160J50197_1003608
261 Ga0065715_10008177
262 Ga0065707_10086829
263 Ga0070676_10012487
264 Ga0070683_100001981
265 Ga0070683_100002633
266 Ga0070683_100018422
267 Ga0070666_10019394
268 Ga0070682_100000041
269 Ga0070682_100008995
270 Ga0068868_100003237
271 Ga0068868_100017209
272 Ga0068868_100034938
273 Ga0070660_100008792
274 Ga0070660_100043308
275 Ga0070689_100006347
276 Ga0070689_100015795
277 Ga0070691_10010460
278 Ga0070661_100002223
279 Ga0070668_100004302
280 Ga0070668_100046310
281 Ga0070669_100007009
282 Ga0070675_100008308
283 Ga0070675_100027972
284 Ga0070671_100004817
285 Ga0070671_100018227
286 Ga0070673_100000996
287 Ga0070673_100029208
288 Ga0070659_100003036
289 Ga0070667_100010943
290 Ga0070667_100018884
291 Ga0070701_10016385
292 Ga0070662_100008691
293 Ga0070681_10004855
294 Ga0070681_10018077
295 Ga0068867_100001595
296 Ga0070698_100002009
297 Ga0070679_100015550
298 Ga0070679_100017147
299 Ga0070684_100011378
300 Ga0068853_100007624
301 Ga0068853_100007735
302 Ga0068853_100012961
303 Ga0068853_100027331
304 Ga0070693_100010915
305 Ga0070665_100000002
306 Ga0070665_100003483
307 Ga0070664_100007908
308 Ga0068857_100006684
309 Ga0068857_100009430
310 Ga0068854_100015340
311 Ga0068854_100030789
312 Ga0068852_100006592
313 Ga0068852_100006600
314 Ga0068859_100000710
315 Ga0068859_100017648
316 Ga0068864_100002568
317 Ga0068861_100015445
318 Ga0068851_10002449
319 Ga0068858_100000982
320 Ga0068858_100027294
321 Ga0068860_100000003
322 Ga0068860_100003982
323 Ga0068860_100020935
324 Ga0068862_100017065
325 Ga0081539_10000925
326 Ga0081539_10004116
327 Ga0097621_100001710
328 Ga0097621_100037362
329 Ga0068871_100001825
330 Ga0068871_100010922
331 Ga0068871_100030530
332 Ga0068871_100035328
333 Ga0075430_100001443
334 Ga0097620_100000710
335 Ga0097620_100017647
336 Ga0105240_10000339
337 Ga0105240_10001189
338 Ga0105240_10003157
339 Ga0105240_10007738
340 Ga0105240_10107261
341 Ga0111539_10026669
342 Ga0105247_10003316
343 Ga0114129_10001062
344 Ga0114129_10028723
345 Ga0105241_10000620
346 Ga0105241_10002367
347 Ga0105248_10006218
348 Ga0105237_10000144
349 Ga0105237_10003556
350 Ga0105237_10010471
351 Ga0105237_10012545
352 Ga0105237_10015841
353 Ga0105238_10009750
354 Ga0105249_10003654
355 Ga0105249_10004335
356 Ga0105249_10025641
357 Ga0105239_10000925
358 Ga0105239_10003012
359 Ga0105239_10006497
360 Ga0105239_10009614
361 Ga0105239_10010003
362 Ga0157373_10005946
363 Ga0157370_10000419
364 Ga0157370_10012201
365 Ga0157370_10017606
366 Ga0157369_10015255
367 Ga0157374_10000013
368 Ga0157374_10004016
369 Ga0157374_10006626
370 Ga0157378_10005785
371 Ga0163162_10002021
372 Ga0163162_10008963
373 Ga0163162_10014014
374 Ga0163162_10025216
375 Ga0163162_10029143
376 Ga0157372_10000667
377 Ga0157372_10014311
378 Ga0157375_10003108
379 Ga0157375_10004642
380 Ga0157375_10020473
381 Ga0157375_10024882
382 Ga0163163_10003232
383 Ga0157380_10017086
384 Ga0157377_10001276
385 Ga0157377_10019068
386 Ga0157379_10015063
387 Ga0157376_10000349
388 Ga0157376_10000583
389 Ga0157376_10004049
390 Ga0157376_10023998
391 Ga0163161_10009910
392 Ga0163161_10015958
393 Ga0207426_1000059
394 Ga0207656_10000967
395 Ga0207710_10001493
396 Ga0207680_10011561
397 Ga0207647_10000064
398 Ga0207645_10002848
399 Ga0207643_10003884
400 Ga0207654_10008395
401 Ga0207707_10018450
402 Ga0207707_10029775
403 Ga0207695_10000056
404 Ga0207695_10000066
405 Ga0207695_10000469
406 Ga0207695_10006255
407 Ga0207695_10013417
408 Ga0207695_10017119
409 Ga0207695_10022437
410 Ga0207671_10001502
411 Ga0207671_10001511
412 Ga0207671_10022871
413 Ga0207660_10020067
414 Ga0207657_10019907
415 Ga0207649_10001925
416 Ga0207652_10008177
417 Ga0207694_10007537
418 Ga0207644_10019219
419 Ga0207706_10003583
420 Ga0207706_10059094
421 Ga0207686_10000812
422 Ga0207669_10016407
423 Ga0207704_10005411
424 Ga0207689_10007344
425 Ga0207689_10011755
426 Ga0207689_10013083
427 Ga0207689_10014898
428 Ga0207689_10022623
429 Ga0207661_10001213
430 Ga0207661_10027126
431 Ga0207679_10001006
432 Ga0207667_10012892
433 Ga0207668_10000337
434 Ga0207658_10002343
435 Ga0207677_10002943
436 Ga0207703_10002226
437 Ga0207639_10008621
438 Ga0207639_10012680
439 Ga0207678_10007708
440 Ga0207641_10005468
441 Ga0207641_10015914
442 Ga0207641_10032895
443 Ga0207648_10000215
444 Ga0207648_10006269
445 Ga0207676_10001609
446 Ga0207674_10008324
447 Ga0207674_10015368
448 Ga0207674_10018580
449 Ga0207674_10021832
450 Ga0207675_100000153
451 Ga0207675_100003678
452 Ga0207683_10007649
453 Ga0207683_10035394
454 Ga0207698_10032572
455 Ga0268266_10000073
456 Ga0268264_10000063
457 Ga0268264_10015977
458 Ga0307517_10008734
459 Ga0307515_10000001
460 Ga0307511_10000181
461 Ga0265327_10000013
462 Ga0265327_10000452
463 Ga0265327_10005795
464 Ga0307516_10003216
465 Ga0307510_10000156
466 Ga0373937_0036577
467 Ga0436365_0188491
468 Ga0439457_000380
469 Ga0466969_0000190
470 Ga0466972_0000168
471 Ga0466972_0000676
472 Ga0466966_0004462
473 Ga0466968_0001851
474 Ga0466970_0001457
475 Ga0466957_0002034
476 Ga0466959_0000003
477 Ga0466959_0000488
478 Ga0495606_0006101
479 Ga0495630_0019246
480 Ga0495668_0000023
481 Ga0495611_0000061
482 Ga0495674_0058140
483 Ga0495672_0013289
484 Ga0495687_000040
485 Ga0495686_0018075
486 Ga0496101_0008503
487 Ga0501031_0006812
488 Ga0501034_0000004
489 Ga0501034_0006158
490 Ga0501036_0001446
491 Ga0501036_0037631
492 Ga0501037_0004345
493 Ga0501037_0024815
494 Ga0501038_0003270
495 Ga0501038_0027388
496 Ga0501043_0003849
497 Ga0501219_000166
498 Ga0501035_0023603
499 Ga0501044_0010038
500 Ga0501044_0011695
501 Ga0501284_00001
502 nmdc:mga05p37_482_c1
503 Ga0500578_0001568
504 Ga0500583_0000019
505 Ga0500562_000034
506 Ga0500642_0004161
507 Ga0500568_0000208
508 Ga0500616_0005798
509 Ga0500622_0001414
510 Ga0500622_0002343
511 Ga0500611_000001
512 2738725029
513 2819585586
514 2929159737

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00580

UvrD-helicase

UvrD/REP helicase N-terminal domain

29

338

0.9

PF13245

AAA_19

AAA domain

33

323

0.86

PF12684

DUF3799

PDDEXK-like domain of unknown function (DUF3799)

816

1064

0.74

PF12705

PDDEXK_1

PD-(D/E)XK nuclease superfamily

814

1068

0.74

PF13361

UvrD_C

UvrD-like helicase C-terminal domain

344

747

0.73

Structural Annotation

Top 5 Hits

ID Description Score Start End
6vsx-assembly1.cif.gz_A x-ray crystal structure of the c-terminal domain of bacillus subtilis rna polymerase binding helicase held 0.786 285 683
3dmn-assembly1.cif.gz_A the crystal structure of the c-terminal domain of a possilbe dna helicase from lactobacillus plantarun wcfs1 0.7819 284 684
6vsx-assembly1.cif.gz_A x-ray crystal structure of the c-terminal domain of bacillus subtilis rna polymerase binding helicase held 0.7815 285 683
3dmn-assembly1.cif.gz_A the crystal structure of the c-terminal domain of a possilbe dna helicase from lactobacillus plantarun wcfs1 0.7598 284 684
6z6d-assembly1.cif.gz_A crystal structure of the hk97 bacteriophage large terminase 0.7113 19 86
ID Description Score Start End Superfamily
af_A0A1D6GCN3_1_145_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9304 339 380 3.40.50.300
2is1B03 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8655 282 685 3.40.50.300
2is1B03 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8569 282 685 3.40.50.300
2is1A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8295 13 280 3.40.50.300
4c30F04 Mainly Alpha;Orthogonal Bundle;PCRA; domain 4;PCRA; domain 4 0.8221 395 561 1.10.486.10
ID Description Score Start End GO Terms
AF-A0A4V1TV05-F1-model_v4 deleted 0.9081 12 117
AF-A0A2E4PR10-F1-model_v4 UvrD-like helicase ATP-binding domain-containing protein 0.9032 11 110 GO:0003677
GO:0005524
GO:0009378
GO:0016787
GO:0036121
GO:0061749
GO:1990518
AF-W1V3G0-F1-model_v4 UvrD/REP helicase 0.8895 19 110 GO:0000725
GO:0003677
GO:0005524
GO:0005829
GO:0009378
GO:0016787
GO:0033202
GO:0036121
GO:0061749
GO:1990518
AF-A0A382KPA1-F1-model_v4 DNA 3'-5' helicase (EC 5.6.2.4) 0.8887 193 611 GO:0000725
GO:0003677
GO:0005524
GO:0009378
GO:0016787
GO:0016853
GO:0036121
GO:0061749
GO:1990518
AF-A0A7V9EBW9-F1-model_v4 UvrD-helicase domain-containing protein 0.8846 19 106 GO:0000725
GO:0003677
GO:0005524
GO:0005829
GO:0016787
GO:0033202
GO:0043138

Map