F367683
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 257 | 182 | 514 | 247 |
Family's Representative Sequence
| Representative Sequence | 3300053117|Ga0500593_000240|Ga0500593_000240_2472_3200 |
| Length | 242 |
| Sequence | VRYLRAVWRLLLCVVHILQGALICAVVFPFKNRAQRLETVGWWSGLLLKRLGIRVESQGEIADGPVLLVSNHMSWLDIMAINAVRPARFVSKADVKAWPLIGWLVACGGTLFIERERKRDALRVVHQVAESLRDGDRIAVFPEGTTGNGEALLPFHANLLQAAIGTLMPVQGIALRYSDDRSERSQAVVWIGDTTLVESLWHAVTAQGLRVRVTALPPQQSKDRDRRELCESVRLQIEGALS |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300053117 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere | Metagenome | Endosphere |
| 2 | 3300002705 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS | Metagenome | Unclassified |
| 3 | 3300002738 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA | Metagenome | Unclassified |
| 4 | 3300002741 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL | Metagenome | Unclassified |
| 5 | 3300002987 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB | Metagenome | Endosphere |
| 6 | 3300003187 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB | Metagenome | Endosphere |
| 7 | 3300003322 | Sugarcane root Sample L2 | Metagenome | Unclassified |
| 8 | 3300003354 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS | Metagenome | Endosphere |
| 9 | 3300003374 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF | Metagenome | Endosphere |
| 10 | 3300003578 | Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) | Metatranscriptome | Unclassified |
| 11 | 3300003771 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 | Metagenome | Endosphere |
| 12 | 3300003773 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 | Metagenome | Endosphere |
| 13 | 3300003775 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 | Metagenome | Endosphere |
| 14 | 3300003781 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 | Metagenome | Endosphere |
| 15 | 3300003790 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 | Metagenome | Endosphere |
| 16 | 3300003791 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 | Metagenome | Endosphere |
| 17 | 3300003792 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 | Metagenome | Endosphere |
| 18 | 3300003794 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 | Metagenome | Endosphere |
| 19 | 3300004625 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 | Metagenome | Endosphere |
| 20 | 3300005262 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) | Metagenome | Endosphere |
| 21 | 3300005289 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) | Metagenome | Rhizosphere |
| 22 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 23 | 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Metagenome | Rhizosphere |
| 24 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 25 | 3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Metagenome | Rhizosphere |
| 26 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 27 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 28 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 29 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 30 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 31 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 32 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 33 | 3300006038 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 | Metagenome | Endosphere |
| 34 | 3300006048 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 | Metagenome | Endosphere |
| 35 | 3300006058 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 | Metagenome | Rhizosphere |
| 36 | 3300006177 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 | Metagenome | Endosphere |
| 37 | 3300006178 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 | Metagenome | Endosphere |
| 38 | 3300006186 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 | Metagenome | Endosphere |
| 39 | 3300006195 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 | Metagenome | Endosphere |
| 40 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 41 | 3300006353 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 | Metagenome | Endosphere |
| 42 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 43 | 3300006846 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Metagenome | Rhizosphere |
| 44 | 3300006946 | Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG | Metagenome | Nodule |
| 45 | 3300006948 | Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 | Metagenome | Nodule |
| 46 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 47 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 48 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 49 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 50 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 51 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 52 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 53 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 54 | 3300014497 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG | Metagenome | Rhizosphere |
| 55 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 56 | 3300015261 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG | Metagenome | Rhizosphere |
| 57 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 58 | 3300025206 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) | Metagenome | Unclassified |
| 59 | 3300025208 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) | Metagenome | Endosphere |
| 60 | 3300025246 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) | Metagenome | Unclassified |
| 61 | 3300025250 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) | Metagenome | Unclassified |
| 62 | 3300025253 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 63 | 3300025256 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) | Metagenome | Unclassified |
| 64 | 3300025258 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) | Metagenome | Endosphere |
| 65 | 3300025263 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 66 | 3300025273 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 67 | 3300025284 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 68 | 3300025291 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 69 | 3300025292 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 70 | 3300025294 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 71 | 3300025295 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 72 | 3300025297 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) | Metagenome | Endosphere |
| 73 | 3300025298 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 74 | 3300025299 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 75 | 3300025302 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 76 | 3300025303 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 77 | 3300025304 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 78 | 3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300025937 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 86 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 87 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 88 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 89 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 90 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 91 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 92 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 93 | 3300030745 | Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 | Metagenome | Rhizosphere |
| 94 | 3300031250 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG | Metagenome | Rhizosphere |
| 95 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 96 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 97 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 98 | 3300031649 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM | Metagenome | Unclassified |
| 99 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 100 | 3300031712 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG | Metagenome | Rhizosphere |
| 101 | 3300031731 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 | Metagenome | Rhizosphere |
| 102 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 103 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 104 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 105 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 106 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 107 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 108 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 109 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 110 | 3300042007 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 | Metagenome | Rhizosphere |
| 111 | 3300042015 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 | Metagenome | Rhizosphere |
| 112 | 3300042116 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126F_E14_082316_1792 | Metagenome | Rhizosphere |
| 113 | 3300042438 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 | Metagenome | Rhizosphere |
| 114 | 3300042439 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 | Metagenome | Rhizosphere |
| 115 | 3300044673 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED | Metagenome | Rhizosphere |
| 116 | 3300044735 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R | Metagenome | Rhizosphere |
| 117 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 118 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 119 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 120 | 3300046463 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere | Metagenome | Rhizosphere |
| 121 | 3300046475 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere | Metagenome | Rhizosphere |
| 122 | 3300046525 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere | Metagenome | Rhizosphere |
| 123 | 3300046528 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere | Metagenome | Rhizosphere |
| 124 | 3300046538 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere | Metagenome | Rhizosphere |
| 125 | 3300046539 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere | Metagenome | Rhizosphere |
| 126 | 3300046615 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere | Metagenome | Rhizosphere |
| 127 | 3300046674 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere | Metagenome | Rhizosphere |
| 128 | 3300046675 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere | Metagenome | Rhizosphere |
| 129 | 3300046683 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere | Metagenome | Rhizosphere |
| 130 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 131 | 3300048090 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere | Metagenome | Rhizosphere |
| 132 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 133 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 134 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 135 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 136 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 137 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 138 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 139 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 140 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 141 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 142 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 143 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 144 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 145 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 146 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 147 | 3300049760 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F12_A_4_control | Metagenome | Rhizosphere |
| 148 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 149 | 3300050489 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation | Metagenome | Endosphere |
| 150 | 3300050490 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation | Metagenome | Endosphere |
| 151 | 3300050492 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation | Metagenome | Endosphere |
| 152 | 3300050493 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation | Metagenome | Endosphere |
| 153 | 3300050494 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation | Metagenome | Endosphere |
| 154 | 3300050496 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation | Metagenome | Endosphere |
| 155 | 3300053088 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere | Metagenome | Endosphere |
| 156 | 3300053090 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere | Metagenome | Endosphere |
| 157 | 3300053092 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere | Metagenome | Endosphere |
| 158 | 3300053093 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere | Metagenome | Endosphere |
| 159 | 3300053121 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere | Metagenome | Endosphere |
| 160 | 3300053122 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere | Metagenome | Endosphere |
| 161 | 3300053125 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere | Metagenome | Endosphere |
| 162 | 3300053129 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere | Metagenome | Endosphere |
| 163 | 3300053136 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere | Metagenome | Endosphere |
| 164 | 3300053140 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere | Metagenome | Endosphere |
| 165 | 3300053177 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere | Metagenome | Endosphere |
| 166 | 3300053729 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 endosphere | Metagenome | Endosphere |
| 167 | 3300053730 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere | Metagenome | Endosphere |
| 168 | 3300055283 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere | Metagenome | Endosphere |
| 169 | 2511231002 | Polaromonas sp. CF318 | Isolate | Rhizosphere |
| 170 | 2738541277 | Variovorax sp. GV051 | Isolate | Unclassified |
| 171 | 2738543019 | Variovorax sp. GV040 | Isolate | Unclassified |
| 172 | 2842733646 | Variovorax sp. R-72446 | Isolate | Unclassified |
| 173 | 2842747753 | Variovorax sp. R-72060 | Isolate | Unclassified |
| 174 | 2885198086 | Variovorax sp. 679 | Isolate | Unclassified |
| 175 | 2885211737 | Variovorax sp. 553 | Isolate | Unclassified |
| 176 | 2904449895 | Variovorax sp. 1763 | Isolate | Rhizosphere |
| 177 | 2904456579 | Variovorax sp. 2002 | Isolate | Unclassified |
| 178 | 2929520902 | Variovorax beijingensis 502 | Isolate | Unclassified |
| 179 | 2945909444 | Variovorax sp. CRF3-Va-1 W1I1 | Isolate | Rhizosphere |
| 180 | 2945972063 | Variovorax paradoxus W2I8 | Isolate | Rhizosphere |
| 181 | 2945984333 | Variovorax sp. W2I14 | Isolate | Rhizosphere |
| 182 | 2954767861 | Variovorax sp. TBS-050B | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 93.77 |
| Metatranscriptomes | 0.78 |
| Isolates | 5.45 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 36.96 |
| Nodule | 0.78 |
| Rhizoplane | 3.89 |
| Rhizosphere | 47.08 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0.39 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0500593_000240 | 3300053117 | Bacteria | 22573 |
| 2 | JGI25156J39149_1000010 | 3300002705 | Bacteria | 200080 |
| 3 | JGI25154J39366_1000027 | 3300002738 | Bacteria | 200075 |
| 4 | JGI25157J39369_1000032 | 3300002741 | Bacteria | 140224 |
| 5 | JGI25159J45721_1005146 | 3300002987 | Bacteria | 4147 |
| 6 | JGI25151J46595_10003457 | 3300003187 | Bacteria | 8721 |
| 7 | JGI25151J46595_10005589 | 3300003187 | Bacteria | 6469 |
| 8 | JGI25151J46595_10006455 | 3300003187 | Bacteria | 5899 |
| 9 | JGI25151J46595_10026483 | 3300003187 | Bacteria | 2339 |
| 10 | rootL2_10175840 | 3300003322 | Bacteria | 5390 |
| 11 | JGI25160J50197_1000223 | 3300003354 | Bacteria | 45156 |
| 12 | JGI25161J50226_1000013 | 3300003374 | Bacteria | 199086 |
| 13 | Ga0006562J51391_1095506 | 3300003578 | Bacteria | 3138 |
| 14 | Ga0006562J51391_1095507 | 3300003578 | Bacteria | 3190 |
| 15 | Ga0055526_1004420 | 3300003771 | Bacteria | 8453 |
| 16 | Ga0055526_1009011 | 3300003771 | Bacteria | 4878 |
| 17 | Ga0055537_1000033 | 3300003773 | Bacteria | 98865 |
| 18 | Ga0055524_1000044 | 3300003775 | Bacteria | 151631 |
| 19 | Ga0055536_1001656 | 3300003781 | Bacteria | 13245 |
| 20 | Ga0055536_1023661 | 3300003781 | Bacteria | 1800 |
| 21 | Ga0055528_1000889 | 3300003790 | Bacteria | 20170 |
| 22 | Ga0055530_10000814 | 3300003791 | Bacteria | 25913 |
| 23 | Ga0055540_1000063 | 3300003792 | Bacteria | 127901 |
| 24 | Ga0055540_1004609 | 3300003792 | Bacteria | 6121 |
| 25 | Ga0055531_10000276 | 3300003794 | Bacteria | 52882 |
| 26 | Ga0055531_10000452 | 3300003794 | Bacteria | 38120 |
| 27 | Ga0055543_1000211 | 3300004625 | Bacteria | 47109 |
| 28 | Ga0065165_1009215 | 3300005262 | Bacteria | 4465 |
| 29 | Ga0065165_1009873 | 3300005262 | Bacteria | 4210 |
| 30 | Ga0065165_1016304 | 3300005262 | Bacteria | 2788 |
| 31 | Ga0065704_10216936 | 3300005289 | Bacteria | 1088 |
| 32 | Ga0068868_100029568 | 3300005338 | Bacteria | 4196 |
| 33 | Ga0070669_100317230 | 3300005353 | Bacteria | 1258 |
| 34 | Ga0070671_100392078 | 3300005355 | Bacteria | 1187 |
| 35 | Ga0070674_100043120 | 3300005356 | Bacteria | 3068 |
| 36 | Ga0070673_100299950 | 3300005364 | Bacteria | 1414 |
| 37 | Ga0070678_100219410 | 3300005456 | Bacteria | 1580 |
| 38 | Ga0070678_100544467 | 3300005456 | Bacteria | 1030 |
| 39 | Ga0068853_100054261 | 3300005539 | Bacteria | 3453 |
| 40 | Ga0070665_100001342 | 3300005548 | Bacteria | 29261 |
| 41 | Ga0070665_100274742 | 3300005548 | Bacteria | 1687 |
| 42 | Ga0068856_100064516 | 3300005614 | Bacteria | 3619 |
| 43 | Ga0068852_100042689 | 3300005616 | Bacteria | 3840 |
| 44 | Ga0068863_100325213 | 3300005841 | Bacteria | 1494 |
| 45 | Ga0075365_10033281 | 3300006038 | Bacteria | 3320 |
| 46 | Ga0075365_10066488 | 3300006038 | Bacteria | 2419 |
| 47 | Ga0075363_100081287 | 3300006048 | Bacteria | 1773 |
| 48 | Ga0075363_100204407 | 3300006048 | Bacteria | 1129 |
| 49 | Ga0075432_10003200 | 3300006058 | Bacteria | 5525 |
| 50 | Ga0075362_10050632 | 3300006177 | Bacteria | 1857 |
| 51 | Ga0075367_10192430 | 3300006178 | Bacteria | 1273 |
| 52 | Ga0075369_10131496 | 3300006186 | Bacteria | 1137 |
| 53 | Ga0075366_10007519 | 3300006195 | Bacteria | 6022 |
| 54 | Ga0075366_10019131 | 3300006195 | Bacteria | 3958 |
| 55 | Ga0097621_100546571 | 3300006237 | Bacteria | 1054 |
| 56 | Ga0075370_10012987 | 3300006353 | Bacteria | 4417 |
| 57 | Ga0068871_100075963 | 3300006358 | Bacteria | 2774 |
| 58 | Ga0075430_100107097 | 3300006846 | Bacteria | 2332 |
| 59 | Ga0079104_1011146 | 3300006946 | Bacteria | 2910 |
| 60 | Ga0099826_10101724 | 3300006948 | Bacteria | 1732 |
| 61 | Ga0105240_10140177 | 3300009093 | Bacteria | 2891 |
| 62 | Ga0105242_10250691 | 3300009176 | Bacteria | 1595 |
| 63 | Ga0105239_10109661 | 3300010375 | Bacteria | 3059 |
| 64 | Ga0157373_10024706 | 3300013100 | Bacteria | 4351 |
| 65 | Ga0157373_10031644 | 3300013100 | Bacteria | 3808 |
| 66 | Ga0157370_10001435 | 3300013104 | Bacteria | 29541 |
| 67 | Ga0157369_10042519 | 3300013105 | Bacteria | 4957 |
| 68 | Ga0163162_10139849 | 3300013306 | Bacteria | 2533 |
| 69 | Ga0157375_10117420 | 3300013308 | Bacteria | 2766 |
| 70 | Ga0157375_10355151 | 3300013308 | Bacteria | 1632 |
| 71 | Ga0182008_10014081 | 3300014497 | Bacteria | 4195 |
| 72 | Ga0182008_10016315 | 3300014497 | Bacteria | 3860 |
| 73 | Ga0182008_10020600 | 3300014497 | Bacteria | 3394 |
| 74 | Ga0157376_10230091 | 3300014969 | Bacteria | 1721 |
| 75 | Ga0182006_1018982 | 3300015261 | Bacteria | 2899 |
| 76 | Ga0163161_10000927 | 3300017792 | Bacteria | 22658 |
| 77 | Ga0163161_10232386 | 3300017792 | Bacteria | 1431 |
| 78 | Ga0209435_100003 | 3300025206 | Bacteria | 669534 |
| 79 | Ga0209436_103270 | 3300025208 | Bacteria | 4376 |
| 80 | Ga0209646_1000008 | 3300025246 | Bacteria | 669534 |
| 81 | Ga0209026_1000007 | 3300025250 | Bacteria | 669534 |
| 82 | Ga0209677_116463 | 3300025253 | Bacteria | 946 |
| 83 | Ga0209759_1000019 | 3300025256 | Bacteria | 357908 |
| 84 | Ga0209129_1004208 | 3300025258 | Bacteria | 5772 |
| 85 | Ga0209565_1000111 | 3300025263 | Bacteria | 117862 |
| 86 | Ga0209673_1000009 | 3300025273 | Bacteria | 620735 |
| 87 | Ga0209673_1000012 | 3300025273 | Bacteria | 579480 |
| 88 | Ga0209673_1007372 | 3300025273 | Bacteria | 5089 |
| 89 | Ga0209130_1000064 | 3300025284 | Bacteria | 196568 |
| 90 | Ga0209130_1000225 | 3300025284 | Bacteria | 74120 |
| 91 | Ga0209675_1000144 | 3300025291 | Bacteria | 94908 |
| 92 | Ga0209675_1008920 | 3300025291 | Bacteria | 3605 |
| 93 | Ga0209676_1000051 | 3300025292 | Bacteria | 389016 |
| 94 | Ga0209676_1001583 | 3300025292 | Bacteria | 20274 |
| 95 | Ga0209025_1000207 | 3300025294 | Bacteria | 140774 |
| 96 | Ga0209025_1008722 | 3300025294 | Bacteria | 7228 |
| 97 | Ga0209025_1010198 | 3300025294 | Bacteria | 6407 |
| 98 | Ga0209025_1011893 | 3300025294 | Bacteria | 5664 |
| 99 | Ga0209564_1001801 | 3300025295 | Bacteria | 19775 |
| 100 | Ga0209564_1001803 | 3300025295 | Bacteria | 19763 |
| 101 | Ga0209564_1006428 | 3300025295 | Bacteria | 6339 |
| 102 | Ga0209758_1040139 | 3300025297 | Bacteria | 1770 |
| 103 | Ga0209050_1000044 | 3300025298 | Bacteria | 391114 |
| 104 | Ga0209050_1005684 | 3300025298 | Bacteria | 7712 |
| 105 | Ga0209050_1010393 | 3300025298 | Bacteria | 4595 |
| 106 | Ga0209050_1017882 | 3300025298 | Bacteria | 2794 |
| 107 | Ga0209256_1000003 | 3300025299 | Bacteria | 1661127 |
| 108 | Ga0207426_1000116 | 3300025302 | Bacteria | 225245 |
| 109 | Ga0207426_1001213 | 3300025302 | Bacteria | 22798 |
| 110 | Ga0207426_1049285 | 3300025302 | Bacteria | 1261 |
| 111 | Ga0209051_1000031 | 3300025303 | Bacteria | 391114 |
| 112 | Ga0209051_1000114 | 3300025303 | Bacteria | 152303 |
| 113 | Ga0209051_1000461 | 3300025303 | Bacteria | 53478 |
| 114 | Ga0209257_1000015 | 3300025304 | Bacteria | 908141 |
| 115 | Ga0209257_1000058 | 3300025304 | Bacteria | 381686 |
| 116 | Ga0209257_1028071 | 3300025304 | Bacteria | 1859 |
| 117 | Ga0207645_10247449 | 3300025907 | Bacteria | 1179 |
| 118 | Ga0207681_10011609 | 3300025923 | Bacteria | 5414 |
| 119 | Ga0207690_10109068 | 3300025932 | Bacteria | 1991 |
| 120 | Ga0207709_10030186 | 3300025935 | Bacteria | 3151 |
| 121 | Ga0207669_10023620 | 3300025937 | Bacteria | 3289 |
| 122 | Ga0207667_10048540 | 3300025949 | Bacteria | 4488 |
| 123 | Ga0207651_10209429 | 3300025960 | Bacteria | 1568 |
| 124 | Ga0207677_10012626 | 3300026023 | Bacteria | 4865 |
| 125 | Ga0207703_10429850 | 3300026035 | Bacteria | 1230 |
| 126 | Ga0207639_10477461 | 3300026041 | Bacteria | 1136 |
| 127 | Ga0207683_10040729 | 3300026121 | Bacteria | 4055 |
| 128 | Ga0207683_10257220 | 3300026121 | Bacteria | 1594 |
| 129 | Ga0207698_10025964 | 3300026142 | Bacteria | 4138 |
| 130 | Ga0207428_10042049 | 3300027907 | Bacteria | 3697 |
| 131 | Ga0268266_10012485 | 3300028379 | Bacteria | 7341 |
| 132 | Ga0268266_10075647 | 3300028379 | Bacteria | 2925 |
| 133 | Ga0268266_10391237 | 3300028379 | Bacteria | 1313 |
| 134 | Ga0268265_10173312 | 3300028380 | Bacteria | 1846 |
| 135 | Ga0316182_1320510 | 3300030745 | Bacteria | 1966 |
| 136 | Ga0265331_10046391 | 3300031250 | Bacteria | 2094 |
| 137 | Ga0265316_10061966 | 3300031344 | Bacteria | 2904 |
| 138 | Ga0307513_10000316 | 3300031456 | Bacteria | 69426 |
| 139 | Ga0307408_100106833 | 3300031548 | Bacteria | 2142 |
| 140 | Ga0307514_10017294 | 3300031649 | Bacteria | 5936 |
| 141 | Ga0265314_10001031 | 3300031711 | Bacteria | 32483 |
| 142 | Ga0265342_10022982 | 3300031712 | Bacteria | 3954 |
| 143 | Ga0307405_10036891 | 3300031731 | Bacteria | 2933 |
| 144 | Ga0307406_10003068 | 3300031901 | Bacteria | 9086 |
| 145 | Ga0307412_10012087 | 3300031911 | Bacteria | 5019 |
| 146 | Ga0307412_10161698 | 3300031911 | Bacteria | 1665 |
| 147 | Ga0307412_10202748 | 3300031911 | Bacteria | 1508 |
| 148 | Ga0307412_10328743 | 3300031911 | Bacteria | 1219 |
| 149 | Ga0307416_100043674 | 3300032002 | Bacteria | 3512 |
| 150 | Ga0307416_100203043 | 3300032002 | Bacteria | 1883 |
| 151 | Ga0307416_100455427 | 3300032002 | Bacteria | 1333 |
| 152 | Ga0395899_0004807 | 3300037312 | Bacteria | 10518 |
| 153 | Ga0395900_0023049 | 3300037418 | Bacteria | 6372 |
| 154 | Ga0395900_0059078 | 3300037418 | Bacteria | 3947 |
| 155 | Ga0395900_0082271 | 3300037418 | Bacteria | 3308 |
| 156 | Ga0395898_0004440 | 3300037466 | Bacteria | 15334 |
| 157 | Ga0395898_0007748 | 3300037466 | Bacteria | 11401 |
| 158 | Ga0395905_0028320 | 3300037471 | Bacteria | 5280 |
| 159 | Ga0395905_0032216 | 3300037471 | Bacteria | 4931 |
| 160 | Ga0395905_0316460 | 3300037471 | Bacteria | 1450 |
| 161 | Ga0395905_0396595 | 3300037471 | Bacteria | 1274 |
| 162 | Ga0395905_0755881 | 3300037471 | Bacteria | 874 |
| 163 | Ga0395901_0015665 | 3300038443 | Bacteria | 7722 |
| 164 | Ga0395901_0016961 | 3300038443 | Bacteria | 7422 |
| 165 | Ga0395901_0083688 | 3300038443 | Bacteria | 3335 |
| 166 | Ga0395901_0093065 | 3300038443 | Bacteria | 3156 |
| 167 | Ga0395901_0133475 | 3300038443 | Bacteria | 2609 |
| 168 | Ga0439449_0000293 | 3300042007 | Bacteria | 18041 |
| 169 | Ga0439462_0020680 | 3300042015 | Bacteria | 1717 |
| 170 | Ga0450912_002885 | 3300042116 | Bacteria | 1190 |
| 171 | Ga0439459_0042526 | 3300042438 | Bacteria | 971 |
| 172 | Ga0439464_0002622 | 3300042439 | Bacteria | 4451 |
| 173 | Ga0453683_0001384 | 3300044673 | Bacteria | 21064 |
| 174 | Ga0466968_0067072 | 3300044735 | Bacteria | 1555 |
| 175 | Ga0466959_0077236 | 3300045049 | Bacteria | 2404 |
| 176 | Ga0451576_0035791 | 3300045051 | Bacteria | 5265 |
| 177 | Ga0451576_0203593 | 3300045051 | Bacteria | 2067 |
| 178 | Ga0466967_0310204 | 3300045976 | Bacteria | 1520 |
| 179 | Ga0495653_0204289 | 3300046463 | Bacteria | 1339 |
| 180 | Ga0495639_0005359 | 3300046475 | Bacteria | 5523 |
| 181 | Ga0495663_0009059 | 3300046525 | Bacteria | 2758 |
| 182 | Ga0495663_0037149 | 3300046525 | Bacteria | 1468 |
| 183 | Ga0495642_0004664 | 3300046528 | Bacteria | 5311 |
| 184 | Ga0495609_0091549 | 3300046538 | Bacteria | 1323 |
| 185 | Ga0495621_0038824 | 3300046539 | Bacteria | 1663 |
| 186 | Ga0495621_0039474 | 3300046539 | Bacteria | 1651 |
| 187 | Ga0495656_0000055 | 3300046615 | Bacteria | 53908 |
| 188 | Ga0495656_0015890 | 3300046615 | Bacteria | 2849 |
| 189 | Ga0495656_0044153 | 3300046615 | Bacteria | 1875 |
| 190 | Ga0495588_0057818 | 3300046674 | Bacteria | 2004 |
| 191 | Ga0495588_0246246 | 3300046674 | Bacteria | 943 |
| 192 | Ga0495657_0102390 | 3300046675 | Bacteria | 1823 |
| 193 | Ga0495658_0080380 | 3300046683 | Bacteria | 1912 |
| 194 | Ga0495604_0379784 | 3300047317 | Bacteria | 934 |
| 195 | Ga0495615_0010221 | 3300048090 | Bacteria | 1870 |
| 196 | Ga0496100_0056233 | 3300048903 | Bacteria | 2573 |
| 197 | Ga0496101_0007239 | 3300048904 | Bacteria | 7180 |
| 198 | Ga0496101_0182015 | 3300048904 | Bacteria | 1618 |
| 199 | Ga0496103_0012087 | 3300048906 | Bacteria | 5128 |
| 200 | Ga0496107_0129302 | 3300048910 | Bacteria | 1864 |
| 201 | Ga0496108_0142365 | 3300048911 | Bacteria | 2066 |
| 202 | Ga0496110_0003564 | 3300048913 | Bacteria | 11958 |
| 203 | Ga0496110_0035559 | 3300048913 | Bacteria | 4322 |
| 204 | Ga0496111_0257253 | 3300048914 | Bacteria | 1295 |
| 205 | Ga0496114_0493093 | 3300048917 | Bacteria | 1084 |
| 206 | Ga0496116_0018187 | 3300048919 | Bacteria | 5428 |
| 207 | Ga0496118_0067366 | 3300048921 | Bacteria | 2607 |
| 208 | Ga0496118_0200378 | 3300048921 | Bacteria | 1183 |
| 209 | Ga0496121_0196759 | 3300048924 | Bacteria | 1440 |
| 210 | Ga0496121_0405966 | 3300048924 | Bacteria | 891 |
| 211 | Ga0496122_0270955 | 3300048925 | Bacteria | 935 |
| 212 | Ga0496123_0000160 | 3300048926 | Bacteria | 135310 |
| 213 | Ga0496123_0125835 | 3300048926 | Bacteria | 1431 |
| 214 | Ga0496124_0139197 | 3300048927 | Bacteria | 1917 |
| 215 | Ga0501033_0265328 | 3300049570 | Bacteria | 1215 |
| 216 | Ga0501263_012233 | 3300049760 | Bacteria | 1075 |
| 217 | Ga0501035_0631648 | 3300049822 | Bacteria | 870 |
| 218 | nmdc:mga03683_8405_c1 | 3300050489 | Bacteria | 3630 |
| 219 | nmdc:mga03n38_23809_c1 | 3300050490 | Bacteria | 2496 |
| 220 | nmdc:mga0yw44_125155_c1 | 3300050492 | Bacteria | 1659 |
| 221 | nmdc:mga0k408_16250_c1 | 3300050493 | Bacteria | 4127 |
| 222 | nmdc:mga0k408_50752_c1 | 3300050493 | Bacteria | 2402 |
| 223 | nmdc:mga06z11_181156_c1 | 3300050494 | Bacteria | 1215 |
| 224 | nmdc:mga06z11_58914_c1 | 3300050494 | Bacteria | 1994 |
| 225 | nmdc:mga07m45_10154_c1 | 3300050496 | Bacteria | 4910 |
| 226 | nmdc:mga07m45_513_c1 | 3300050496 | Bacteria | 16432 |
| 227 | Ga0500644_0015840 | 3300053088 | Bacteria | 2159 |
| 228 | Ga0500646_0041027 | 3300053090 | Bacteria | 1303 |
| 229 | Ga0500583_0114246 | 3300053092 | Bacteria | 1332 |
| 230 | Ga0500651_0282429 | 3300053093 | Bacteria | 957 |
| 231 | Ga0500593_010985 | 3300053117 | Bacteria | 3812 |
| 232 | Ga0500607_025974 | 3300053121 | Bacteria | 3259 |
| 233 | Ga0500608_019972 | 3300053122 | Bacteria | 3077 |
| 234 | Ga0500618_026363 | 3300053125 | Bacteria | 1388 |
| 235 | Ga0500628_021780 | 3300053129 | Bacteria | 1304 |
| 236 | Ga0500559_0006229 | 3300053136 | Bacteria | 5401 |
| 237 | Ga0500573_0010400 | 3300053140 | Bacteria | 5193 |
| 238 | Ga0500636_0085950 | 3300053177 | Unclassified | 1807 |
| 239 | Ga0500625_054943 | 3300053729 | Bacteria | 1827 |
| 240 | Ga0500645_005990 | 3300053730 | Bacteria | 4394 |
| 241 | Ga0500645_013781 | 3300053730 | Bacteria | 2589 |
| 242 | Ga0500645_030808 | 3300053730 | Bacteria | 1613 |
| 243 | Ga0500661_002688 | 3300055283 | Bacteria | 3362 |
| 244 | 2511243642 | 2511231002 | Bacteria | 5042903 |
| 245 | 2738721436 | 2738541277 | Bacteria | 7458140 |
| 246 | 2739281105 | 2738543019 | Bacteria | 7459457 |
| 247 | 2842733950 | 2842733646 | Bacteria | 5716726 |
| 248 | 2842752657 | 2842747753 | Bacteria | 5578255 |
| 249 | 2885202904 | 2885198086 | Bacteria | 7212419 |
| 250 | 2885216699 | 2885211737 | Bacteria | 7212420 |
| 251 | 2904452703 | 2904449895 | Bacteria | 6927402 |
| 252 | 2904460269 | 2904456579 | Bacteria | 6819253 |
| 253 | 2929525664 | 2929520902 | Bacteria | 6765052 |
| 254 | 2945909683 | 2945909444 | Bacteria | 7065066 |
| 255 | 2945975424 | 2945972063 | Bacteria | 6086495 |
| 256 | 2945988345 | 2945984333 | Bacteria | 7358892 |
| 257 | 2954769132 | 2954767861 | Bacteria | 5535784 |
| 258 | Ga0500593_000240 | |||
| 259 | JGI25156J39149_1000010 | |||
| 260 | JGI25154J39366_1000027 | |||
| 261 | JGI25157J39369_1000032 | |||
| 262 | JGI25159J45721_1005146 | |||
| 263 | JGI25151J46595_10003457 | |||
| 264 | JGI25151J46595_10005589 | |||
| 265 | JGI25151J46595_10006455 | |||
| 266 | JGI25151J46595_10026483 | |||
| 267 | rootL2_10175840 | |||
| 268 | JGI25160J50197_1000223 | |||
| 269 | JGI25161J50226_1000013 | |||
| 270 | Ga0006562J51391_1095506 | |||
| 271 | Ga0006562J51391_1095507 | |||
| 272 | Ga0055526_1004420 | |||
| 273 | Ga0055526_1009011 | |||
| 274 | Ga0055537_1000033 | |||
| 275 | Ga0055524_1000044 | |||
| 276 | Ga0055536_1001656 | |||
| 277 | Ga0055536_1023661 | |||
| 278 | Ga0055528_1000889 | |||
| 279 | Ga0055530_10000814 | |||
| 280 | Ga0055540_1000063 | |||
| 281 | Ga0055540_1004609 | |||
| 282 | Ga0055531_10000276 | |||
| 283 | Ga0055531_10000452 | |||
| 284 | Ga0055543_1000211 | |||
| 285 | Ga0065165_1009215 | |||
| 286 | Ga0065165_1009873 | |||
| 287 | Ga0065165_1016304 | |||
| 288 | Ga0065704_10216936 | |||
| 289 | Ga0068868_100029568 | |||
| 290 | Ga0070669_100317230 | |||
| 291 | Ga0070671_100392078 | |||
| 292 | Ga0070674_100043120 | |||
| 293 | Ga0070673_100299950 | |||
| 294 | Ga0070678_100219410 | |||
| 295 | Ga0070678_100544467 | |||
| 296 | Ga0068853_100054261 | |||
| 297 | Ga0070665_100001342 | |||
| 298 | Ga0070665_100274742 | |||
| 299 | Ga0068856_100064516 | |||
| 300 | Ga0068852_100042689 | |||
| 301 | Ga0068863_100325213 | |||
| 302 | Ga0075365_10033281 | |||
| 303 | Ga0075365_10066488 | |||
| 304 | Ga0075363_100081287 | |||
| 305 | Ga0075363_100204407 | |||
| 306 | Ga0075432_10003200 | |||
| 307 | Ga0075362_10050632 | |||
| 308 | Ga0075367_10192430 | |||
| 309 | Ga0075369_10131496 | |||
| 310 | Ga0075366_10007519 | |||
| 311 | Ga0075366_10019131 | |||
| 312 | Ga0097621_100546571 | |||
| 313 | Ga0075370_10012987 | |||
| 314 | Ga0068871_100075963 | |||
| 315 | Ga0075430_100107097 | |||
| 316 | Ga0079104_1011146 | |||
| 317 | Ga0099826_10101724 | |||
| 318 | Ga0105240_10140177 | |||
| 319 | Ga0105242_10250691 | |||
| 320 | Ga0105239_10109661 | |||
| 321 | Ga0157373_10024706 | |||
| 322 | Ga0157373_10031644 | |||
| 323 | Ga0157370_10001435 | |||
| 324 | Ga0157369_10042519 | |||
| 325 | Ga0163162_10139849 | |||
| 326 | Ga0157375_10117420 | |||
| 327 | Ga0157375_10355151 | |||
| 328 | Ga0182008_10014081 | |||
| 329 | Ga0182008_10016315 | |||
| 330 | Ga0182008_10020600 | |||
| 331 | Ga0157376_10230091 | |||
| 332 | Ga0182006_1018982 | |||
| 333 | Ga0163161_10000927 | |||
| 334 | Ga0163161_10232386 | |||
| 335 | Ga0209435_100003 | |||
| 336 | Ga0209436_103270 | |||
| 337 | Ga0209646_1000008 | |||
| 338 | Ga0209026_1000007 | |||
| 339 | Ga0209677_116463 | |||
| 340 | Ga0209759_1000019 | |||
| 341 | Ga0209129_1004208 | |||
| 342 | Ga0209565_1000111 | |||
| 343 | Ga0209673_1000009 | |||
| 344 | Ga0209673_1000012 | |||
| 345 | Ga0209673_1007372 | |||
| 346 | Ga0209130_1000064 | |||
| 347 | Ga0209130_1000225 | |||
| 348 | Ga0209675_1000144 | |||
| 349 | Ga0209675_1008920 | |||
| 350 | Ga0209676_1000051 | |||
| 351 | Ga0209676_1001583 | |||
| 352 | Ga0209025_1000207 | |||
| 353 | Ga0209025_1008722 | |||
| 354 | Ga0209025_1010198 | |||
| 355 | Ga0209025_1011893 | |||
| 356 | Ga0209564_1001801 | |||
| 357 | Ga0209564_1001803 | |||
| 358 | Ga0209564_1006428 | |||
| 359 | Ga0209758_1040139 | |||
| 360 | Ga0209050_1000044 | |||
| 361 | Ga0209050_1005684 | |||
| 362 | Ga0209050_1010393 | |||
| 363 | Ga0209050_1017882 | |||
| 364 | Ga0209256_1000003 | |||
| 365 | Ga0207426_1000116 | |||
| 366 | Ga0207426_1001213 | |||
| 367 | Ga0207426_1049285 | |||
| 368 | Ga0209051_1000031 | |||
| 369 | Ga0209051_1000114 | |||
| 370 | Ga0209051_1000461 | |||
| 371 | Ga0209257_1000015 | |||
| 372 | Ga0209257_1000058 | |||
| 373 | Ga0209257_1028071 | |||
| 374 | Ga0207645_10247449 | |||
| 375 | Ga0207681_10011609 | |||
| 376 | Ga0207690_10109068 | |||
| 377 | Ga0207709_10030186 | |||
| 378 | Ga0207669_10023620 | |||
| 379 | Ga0207667_10048540 | |||
| 380 | Ga0207651_10209429 | |||
| 381 | Ga0207677_10012626 | |||
| 382 | Ga0207703_10429850 | |||
| 383 | Ga0207639_10477461 | |||
| 384 | Ga0207683_10040729 | |||
| 385 | Ga0207683_10257220 | |||
| 386 | Ga0207698_10025964 | |||
| 387 | Ga0207428_10042049 | |||
| 388 | Ga0268266_10012485 | |||
| 389 | Ga0268266_10075647 | |||
| 390 | Ga0268266_10391237 | |||
| 391 | Ga0268265_10173312 | |||
| 392 | Ga0316182_1320510 | |||
| 393 | Ga0265331_10046391 | |||
| 394 | Ga0265316_10061966 | |||
| 395 | Ga0307513_10000316 | |||
| 396 | Ga0307408_100106833 | |||
| 397 | Ga0307514_10017294 | |||
| 398 | Ga0265314_10001031 | |||
| 399 | Ga0265342_10022982 | |||
| 400 | Ga0307405_10036891 | |||
| 401 | Ga0307406_10003068 | |||
| 402 | Ga0307412_10012087 | |||
| 403 | Ga0307412_10161698 | |||
| 404 | Ga0307412_10202748 | |||
| 405 | Ga0307412_10328743 | |||
| 406 | Ga0307416_100043674 | |||
| 407 | Ga0307416_100203043 | |||
| 408 | Ga0307416_100455427 | |||
| 409 | Ga0395899_0004807 | |||
| 410 | Ga0395900_0023049 | |||
| 411 | Ga0395900_0059078 | |||
| 412 | Ga0395900_0082271 | |||
| 413 | Ga0395898_0004440 | |||
| 414 | Ga0395898_0007748 | |||
| 415 | Ga0395905_0028320 | |||
| 416 | Ga0395905_0032216 | |||
| 417 | Ga0395905_0316460 | |||
| 418 | Ga0395905_0396595 | |||
| 419 | Ga0395905_0755881 | |||
| 420 | Ga0395901_0015665 | |||
| 421 | Ga0395901_0016961 | |||
| 422 | Ga0395901_0083688 | |||
| 423 | Ga0395901_0093065 | |||
| 424 | Ga0395901_0133475 | |||
| 425 | Ga0439449_0000293 | |||
| 426 | Ga0439462_0020680 | |||
| 427 | Ga0450912_002885 | |||
| 428 | Ga0439459_0042526 | |||
| 429 | Ga0439464_0002622 | |||
| 430 | Ga0453683_0001384 | |||
| 431 | Ga0466968_0067072 | |||
| 432 | Ga0466959_0077236 | |||
| 433 | Ga0451576_0035791 | |||
| 434 | Ga0451576_0203593 | |||
| 435 | Ga0466967_0310204 | |||
| 436 | Ga0495653_0204289 | |||
| 437 | Ga0495639_0005359 | |||
| 438 | Ga0495663_0009059 | |||
| 439 | Ga0495663_0037149 | |||
| 440 | Ga0495642_0004664 | |||
| 441 | Ga0495609_0091549 | |||
| 442 | Ga0495621_0038824 | |||
| 443 | Ga0495621_0039474 | |||
| 444 | Ga0495656_0000055 | |||
| 445 | Ga0495656_0015890 | |||
| 446 | Ga0495656_0044153 | |||
| 447 | Ga0495588_0057818 | |||
| 448 | Ga0495588_0246246 | |||
| 449 | Ga0495657_0102390 | |||
| 450 | Ga0495658_0080380 | |||
| 451 | Ga0495604_0379784 | |||
| 452 | Ga0495615_0010221 | |||
| 453 | Ga0496100_0056233 | |||
| 454 | Ga0496101_0007239 | |||
| 455 | Ga0496101_0182015 | |||
| 456 | Ga0496103_0012087 | |||
| 457 | Ga0496107_0129302 | |||
| 458 | Ga0496108_0142365 | |||
| 459 | Ga0496110_0003564 | |||
| 460 | Ga0496110_0035559 | |||
| 461 | Ga0496111_0257253 | |||
| 462 | Ga0496114_0493093 | |||
| 463 | Ga0496116_0018187 | |||
| 464 | Ga0496118_0067366 | |||
| 465 | Ga0496118_0200378 | |||
| 466 | Ga0496121_0196759 | |||
| 467 | Ga0496121_0405966 | |||
| 468 | Ga0496122_0270955 | |||
| 469 | Ga0496123_0000160 | |||
| 470 | Ga0496123_0125835 | |||
| 471 | Ga0496124_0139197 | |||
| 472 | Ga0501033_0265328 | |||
| 473 | Ga0501263_012233 | |||
| 474 | Ga0501035_0631648 | |||
| 475 | nmdc:mga03683_8405_c1 | |||
| 476 | nmdc:mga03n38_23809_c1 | |||
| 477 | nmdc:mga0yw44_125155_c1 | |||
| 478 | nmdc:mga0k408_16250_c1 | |||
| 479 | nmdc:mga0k408_50752_c1 | |||
| 480 | nmdc:mga06z11_181156_c1 | |||
| 481 | nmdc:mga06z11_58914_c1 | |||
| 482 | nmdc:mga07m45_10154_c1 | |||
| 483 | nmdc:mga07m45_513_c1 | |||
| 484 | Ga0500644_0015840 | |||
| 485 | Ga0500646_0041027 | |||
| 486 | Ga0500583_0114246 | |||
| 487 | Ga0500651_0282429 | |||
| 488 | Ga0500593_010985 | |||
| 489 | Ga0500607_025974 | |||
| 490 | Ga0500608_019972 | |||
| 491 | Ga0500618_026363 | |||
| 492 | Ga0500628_021780 | |||
| 493 | Ga0500559_0006229 | |||
| 494 | Ga0500573_0010400 | |||
| 495 | Ga0500636_0085950 | |||
| 496 | Ga0500625_054943 | |||
| 497 | Ga0500645_005990 | |||
| 498 | Ga0500645_013781 | |||
| 499 | Ga0500645_030808 | |||
| 500 | Ga0500661_002688 | |||
| 501 | 2511243642 | |||
| 502 | 2738721436 | |||
| 503 | 2739281105 | |||
| 504 | 2842733950 | |||
| 505 | 2842752657 | |||
| 506 | 2885202904 | |||
| 507 | 2885216699 | |||
| 508 | 2904452703 | |||
| 509 | 2904460269 | |||
| 510 | 2929525664 | |||
| 511 | 2945909683 | |||
| 512 | 2945975424 | |||
| 513 | 2945988345 | |||
| 514 | 2954769132 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 5kym-assembly2.cif.gz_B | crystal structure of the 1-acyl-sn-glycerophosphate (lpa) acyltransferase, plsc, from thermotoga maritima | 0.763 | 2 | 242 |
| 5ziz-assembly3.cif.gz_B | crystal structure of xanthomonas campestris flgl (space group h3) | 0.7559 | 2 | 52 |
| 5kym-assembly1.cif.gz_A | crystal structure of the 1-acyl-sn-glycerophosphate (lpa) acyltransferase, plsc, from thermotoga maritima | 0.7406 | 1 | 242 |
| 5kym-assembly2.cif.gz_B | crystal structure of the 1-acyl-sn-glycerophosphate (lpa) acyltransferase, plsc, from thermotoga maritima | 0.7365 | 2 | 242 |
| 5kym-assembly1.cif.gz_A | crystal structure of the 1-acyl-sn-glycerophosphate (lpa) acyltransferase, plsc, from thermotoga maritima | 0.7215 | 1 | 242 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_Q54EU4_95_228_3.40.50.620 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs | 0.8834 | 65 | 175 | 3.40.50.620 |
| af_O53516_20_152_3.40.50.2000 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; | 0.8783 | 61 | 175 | 3.40.50.2000 |
| af_Q8GXU8_180_307_3.40.50.2000 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; | 0.8754 | 60 | 175 | 3.40.50.2000 |
| af_Q22267_77_205_3.40.50.2000 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; | 0.8718 | 63 | 175 | 3.40.50.2000 |
| af_I6YDI9_312_439_3.40.50.620 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs | 0.8556 | 63 | 175 | 3.40.50.620 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-F3KUD3-F1-model_v4 | Phospholipid/glycerol acyltransferase | 0.9761 | 4 | 246 |
GO:0003841
GO:0006654 GO:0016020 |
| AF-A0A1Y0EM48-F1-model_v4 | Phospholipid/glycerol acyltransferase domain-containing protein | 0.9706 | 4 | 244 |
GO:0006629
GO:0016020 GO:0016746 |
| AF-A0A536UYI1-F1-model_v4 | 1-acyl-sn-glycerol-3-phosphate acyltransferase | 0.9576 | 5 | 218 |
GO:0003841
GO:0006654 GO:0016020 |
| AF-F3KUD3-F1-model_v4 | Phospholipid/glycerol acyltransferase | 0.9567 | 4 | 246 |
GO:0003841
GO:0006654 GO:0016020 |
| AF-A0A4Q7W0M5-F1-model_v4 | Lyso-ornithine lipid acyltransferase | 0.9565 | 5 | 244 |
GO:0003841
GO:0006654 GO:0016020 |