F367691

General Info

Members Datasets Scaffolds Average Seq Length
257 148 514 634

Family's Representative Sequence

Representative Sequence 3300053163|Ga0500639_004064|Ga0500639_004064_1872_4037
Length 721
Sequence MPRLFRQGLQTAFDLAVLSAVYWLGFLFRFEFSIPAAWRSPALIGWPYVVLVGYAVLGAVGVPRMSWRYISLREAARIAAAGAFATVILVALRGLRVALPVMREFAVVPYGVLCMNFFLGFVGLVGVRATRRIYGELAERKLRSAGRKRERVLLIGAGQAGVVVAREIASRPDLALQPVGFLDDDHLKVGMQIGGLPVLGRIDEVVEIAARKRVTRVLITIANAAGSQIRAITMRCRDAGLETKIIPGIYEIVGDRVNLSRIREVAIEDLLGREPVQLDEDQLNASIRGAVVMVTGAGGSIGSELCRQICRYAPARLVLVERFENALFEIHRELAGLYPDLAIDPWIGDVTDARRMTQVFGEVRPLIVFHAAAHKHVPMMEQNPGEAVKNNVGGTRLIADLADRFGVERFVLISTDKAVNPTSVMGATKRVAEIYTQALALRSKTRFVTVRFGNVLGSNGSVIPIFKQQIAAGGPVTVTHPDMQRYFMTIPEASQLVLQAGAMGTGGEIFILDMGEPVKIVDLARDLITLSGFRPGVDIDIAFNGVRPGEKLFEQLATDAEHADKTKHPKIFIGRIASPAWAEVSRAVDELVALVGDGETPQIRESLRALVPEYTGGLAQGSQPVVALPAARARRKLQGVPELAEVSDLPELLGLAEAARAPEHRERLARGSAPVGPAVSAPISAPASVVERPEPAPHVEHSKPRRDTATQPLLAVRAAQG

Samples

Sample ID Description Type Environment
1 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
7 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
10 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
11 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
12 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
13 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
14 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
15 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
16 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
17 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
18 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
19 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
20 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
21 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
22 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
23 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
24 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
25 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
26 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
27 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
28 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
29 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
30 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
32 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
34 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
35 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
36 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
37 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
38 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
49 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
51 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
52 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
53 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
54 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
55 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
56 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
57 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
58 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
59 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
60 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
61 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
62 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
63 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
64 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
65 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
66 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
67 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
68 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
69 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
70 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
71 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
72 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
73 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
74 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
75 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
76 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
77 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
78 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
79 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
80 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
81 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
82 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
83 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
84 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
85 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
86 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
87 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
88 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
89 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
90 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
91 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
92 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
93 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
94 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
95 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
96 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
97 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
98 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
99 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
100 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
101 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
102 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
103 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
104 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
105 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
106 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
107 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
108 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
109 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
110 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
111 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
112 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
113 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
114 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
115 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
116 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
117 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
118 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
119 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
120 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
121 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
122 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
123 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
124 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
125 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
126 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
127 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
128 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
129 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
130 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
131 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
132 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
133 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
134 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
135 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
136 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
137 3300053120 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere Metagenome Endosphere
138 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
139 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
140 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
141 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
142 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
143 2510917027 Brevibacillus sp. CF112 Isolate Rhizosphere
144 2512564013 Brevibacillus sp. BC25 Isolate Rhizosphere
145 2915597211 Brevibacillus brevis Ag35 Isolate Nodule
146 2915606848 Brevibacillus sp. HD1.4A Isolate Rhizosphere
147 2929183550 Brevibacillus sp. R-71971 Hybrid assembly Isolate Unclassified
148 8054795415 Paenibacillus periandrae PM10 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 97.67
Metatranscriptomes 0
Isolates 2.33

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.89
Nodule 0.78
Rhizoplane 3.89
Rhizosphere 87.94
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0500639_004064 3300053163 Bacteria 7426
2 JGI25406J46586_10019168 3300003203 Bacteria 2795
3 Ga0070683_100050077 3300005329 Bacteria 3865
4 Ga0070690_100030041 3300005330 Bacteria 3374
5 Ga0070682_100054825 3300005337 Bacteria 2503
6 Ga0070668_100057752 3300005347 Bacteria 3000
7 Ga0070688_100047181 3300005365 Bacteria 2671
8 Ga0070714_100068040 3300005435 Bacteria 3072
9 Ga0070678_100002821 3300005456 Bacteria 9602
10 Ga0070681_10000921 3300005458 Bacteria 24871
11 Ga0070706_100025948 3300005467 Bacteria 5392
12 Ga0070698_100004184 3300005471 Bacteria 15854
13 Ga0070684_100004414 3300005535 Bacteria 10705
14 Ga0070684_100009365 3300005535 Bacteria 7710
15 Ga0070684_100025079 3300005535 Bacteria 5008
16 Ga0070697_100047784 3300005536 Bacteria 3470
17 Ga0070664_100037077 3300005564 Bacteria 4097
18 Ga0070664_100129732 3300005564 Bacteria 2214
19 Ga0068857_100000231 3300005577 Bacteria 37351
20 Ga0068857_100001406 3300005577 Bacteria 19005
21 Ga0068857_100039576 3300005577 Bacteria 4176
22 Ga0070702_100041436 3300005615 Bacteria 2583
23 Ga0068859_100031786 3300005617 Bacteria 5302
24 Ga0068861_100086267 3300005719 Bacteria 2467
25 Ga0081455_10003746 3300005937 Bacteria 17377
26 Ga0081455_10016571 3300005937 Bacteria 7109
27 Ga0081455_10046607 3300005937 Bacteria 3759
28 Ga0081538_10000677 3300005981 Bacteria 37447
29 Ga0081538_10001893 3300005981 Bacteria 21009
30 Ga0081538_10041931 3300005981 Bacteria 2896
31 Ga0081540_1011431 3300005983 Bacteria 5931
32 Ga0081539_10000397 3300005985 Bacteria 93458
33 Ga0081539_10003790 3300005985 Bacteria 17843
34 Ga0075365_10010552 3300006038 Bacteria 5386
35 Ga0075428_100010938 3300006844 Bacteria 10091
36 Ga0075428_100012199 3300006844 Bacteria 9556
37 Ga0075428_100019175 3300006844 Bacteria 7564
38 Ga0075428_100129018 3300006844 Bacteria 2751
39 Ga0075430_100051713 3300006846 Bacteria 3461
40 Ga0075431_100017646 3300006847 Bacteria 7257
41 Ga0075431_100065812 3300006847 Bacteria 3742
42 Ga0075431_100086732 3300006847 Bacteria 3230
43 Ga0075429_100002948 3300006880 Bacteria 14433
44 Ga0075429_100008509 3300006880 Bacteria 8927
45 Ga0075429_100019893 3300006880 Bacteria 5821
46 Ga0075429_100026221 3300006880 Bacteria 5059
47 Ga0075429_100037721 3300006880 Bacteria 4207
48 Ga0097620_100031786 3300006931 Bacteria 5302
49 Ga0111539_10002849 3300009094 Bacteria 22975
50 Ga0111539_10009128 3300009094 Bacteria 12546
51 Ga0105245_10000019 3300009098 Bacteria 182590
52 Ga0105245_10021311 3300009098 Bacteria 5683
53 Ga0105245_10023111 3300009098 Bacteria 5455
54 Ga0114129_10001817 3300009147 Bacteria 29087
55 Ga0114129_10004682 3300009147 Bacteria 19328
56 Ga0114129_10026802 3300009147 Bacteria 8161
57 Ga0114129_10048920 3300009147 Bacteria 5942
58 Ga0105249_10007199 3300009553 Bacteria 9715
59 Ga0163163_10039425 3300014325 Bacteria 4610
60 Ga0157380_10041483 3300014326 Bacteria 3592
61 Ga0157379_10044289 3300014968 Bacteria 3972
62 Ga0157376_10000621 3300014969 Bacteria 22961
63 Ga0207688_10014968 3300025901 Bacteria 4210
64 Ga0207707_10018407 3300025912 Bacteria 6090
65 Ga0207687_10000209 3300025927 Bacteria 39632
66 Ga0207687_10014497 3300025927 Bacteria 5158
67 Ga0207711_10128679 3300025941 Bacteria 2268
68 Ga0207661_10007464 3300025944 Bacteria 7779
69 Ga0207661_10060149 3300025944 Bacteria 3064
70 Ga0207661_10067157 3300025944 Bacteria 2915
71 Ga0207679_10042681 3300025945 Bacteria 3261
72 Ga0207668_10077334 3300025972 Bacteria 2399
73 Ga0207674_10000602 3300026116 Bacteria 47280
74 Ga0207674_10001034 3300026116 Bacteria 36274
75 Ga0207674_10038596 3300026116 Bacteria 4954
76 Ga0207675_100002740 3300026118 Bacteria 17341
77 Ga0207675_100037510 3300026118 Bacteria 4520
78 Ga0207675_100061172 3300026118 Bacteria 3515
79 Ga0207683_10004622 3300026121 Bacteria 11865
80 Ga0207428_10005704 3300027907 Bacteria 11572
81 Ga0207428_10008092 3300027907 Bacteria 9533
82 Ga0207428_10031272 3300027907 Bacteria 4395
83 Ga0207428_10032779 3300027907 Bacteria 4272
84 Ga0268264_10132955 3300028381 Bacteria 2208
85 Ga0307517_10030651 3300028786 Bacteria 6294
86 Ga0307515_10008246 3300028794 Bacteria 20365
87 Ga0265338_10029637 3300028800 Bacteria 5418
88 Ga0265316_10018453 3300031344 Bacteria 5994
89 Ga0307509_10000040 3300031507 Bacteria 184460
90 Ga0307509_10018598 3300031507 Bacteria 7964
91 Ga0307508_10003185 3300031616 Bacteria 16781
92 Ga0316579_10020484 3300031691 Bacteria 2935
93 Ga0265314_10002077 3300031711 Bacteria 21133
94 Ga0316576_10042358 3300031727 Bacteria 3281
95 Ga0316578_10019395 3300031728 Bacteria 3742
96 Ga0307516_10000540 3300031730 Bacteria 50545
97 Ga0307516_10063835 3300031730 Bacteria 3564
98 Ga0307406_10037408 3300031901 Bacteria 2997
99 Ga0307407_10029456 3300031903 Bacteria 2949
100 Ga0307409_100029855 3300031995 Bacteria 3908
101 Ga0307414_10008441 3300032004 Bacteria 5841
102 Ga0307411_10088774 3300032005 Bacteria 2151
103 Ga0307415_100039118 3300032126 Bacteria 3131
104 Ga0373949_0000202 3300035090 Bacteria 22907
105 Ga0373936_0000054 3300035113 Bacteria 61979
106 Ga0373941_0000131 3300035115 Bacteria 13158
107 Ga0373961_0000146 3300035241 Bacteria 34486
108 Ga0316582_0010948 3300036647 Bacteria 4995
109 Ga0316582_0023765 3300036647 Bacteria 3656
110 Ga0395899_0005039 3300037312 Bacteria 10274
111 Ga0395899_0032867 3300037312 Bacteria 3898
112 Ga0395900_0009932 3300037418 Bacteria 9744
113 Ga0395900_0033394 3300037418 Bacteria 5296
114 Ga0395900_0045678 3300037418 Bacteria 4511
115 Ga0395900_0068526 3300037418 Bacteria 3646
116 Ga0395898_0012238 3300037466 Bacteria 8869
117 Ga0395898_0013432 3300037466 Bacteria 8434
118 Ga0395898_0014970 3300037466 Bacteria 7964
119 Ga0395898_0152709 3300037466 Bacteria 2209
120 Ga0395905_0016922 3300037471 Bacteria 6926
121 Ga0395901_0048639 3300038443 Bacteria 4404
122 Ga0395901_0131706 3300038443 Bacteria 2628
123 Ga0436365_1265074 3300039437 Bacteria 2689
124 Ga0451576_0053750 3300045051 Bacteria 4218
125 Ga0495582_0004218 3300046473 Bacteria 8085
126 Ga0495597_0031737 3300046542 Bacteria 2401
127 Ga0495659_0018930 3300046664 Bacteria 2299
128 Ga0495588_0010653 3300046674 Bacteria 4285
129 Ga0495669_0022105 3300046684 Bacteria 2763
130 Ga0495613_0033750 3300046689 Bacteria 3801
131 Ga0495581_0005695 3300047315 Bacteria 7225
132 Ga0495676_0052887 3300047321 Bacteria 3239
133 Ga0495686_0006343 3300047472 Bacteria 9074
134 Ga0496102_0057906 3300048905 Bacteria 3540
135 Ga0496108_0016224 3300048911 Bacteria 6073
136 Ga0496109_0005181 3300048912 Bacteria 10883
137 Ga0496109_0006851 3300048912 Bacteria 9613
138 Ga0496110_0000980 3300048913 Bacteria 20040
139 Ga0496110_0007640 3300048913 Bacteria 8650
140 Ga0496110_0050925 3300048913 Bacteria 3638
141 Ga0496111_0000694 3300048914 Bacteria 17757
142 Ga0496111_0006363 3300048914 Bacteria 7664
143 Ga0496111_0081705 3300048914 Bacteria 2359
144 Ga0501031_0000184 3300049568 Bacteria 35190
145 Ga0501031_0012894 3300049568 Bacteria 5460
146 Ga0501032_0001991 3300049569 Bacteria 16082
147 Ga0501032_0011473 3300049569 Bacteria 6364
148 Ga0501033_0000196 3300049570 Bacteria 57814
149 Ga0501033_0020590 3300049570 Bacteria 4984
150 Ga0501034_0004633 3300049571 Bacteria 15230
151 Ga0501034_0023298 3300049571 Bacteria 6309
152 Ga0501036_0003075 3300049572 Bacteria 13301
153 Ga0501036_0008704 3300049572 Bacteria 8323
154 Ga0501036_0009187 3300049572 Bacteria 8128
155 Ga0501037_0003828 3300049573 Bacteria 10918
156 Ga0501038_0002399 3300049574 Bacteria 17460
157 Ga0501038_0032955 3300049574 Bacteria 4564
158 Ga0501038_0108423 3300049574 Bacteria 2302
159 Ga0501039_0088312 3300049575 Bacteria 2415
160 Ga0501040_0000239 3300049576 Bacteria 32294
161 Ga0501040_0003027 3300049576 Bacteria 10897
162 Ga0501040_0005095 3300049576 Bacteria 8493
163 Ga0501041_0000184 3300049577 Bacteria 28387
164 Ga0501041_0030884 3300049577 Bacteria 3233
165 Ga0501042_0000014 3300049578 Bacteria 53046
166 Ga0501042_0000366 3300049578 Bacteria 22815
167 Ga0501042_0003494 3300049578 Bacteria 9874
168 Ga0501043_0000092 3300049579 Bacteria 80825
169 Ga0501046_0006406 3300049580 Bacteria 10436
170 Ga0501046_0009400 3300049580 Bacteria 8450
171 Ga0501046_0022171 3300049580 Bacteria 5234
172 Ga0501047_0000396 3300049581 Bacteria 48912
173 Ga0501047_0001396 3300049581 Bacteria 23683
174 Ga0501047_0006284 3300049581 Bacteria 11170
175 Ga0501048_0001148 3300049582 Bacteria 19885
176 Ga0501048_0004261 3300049582 Bacteria 10899
177 Ga0501048_0023337 3300049582 Bacteria 4522
178 Ga0501048_0036324 3300049582 Bacteria 3541
179 Ga0501068_0000009 3300049584 Bacteria 67122
180 Ga0501068_0062318 3300049584 Bacteria 2267
181 Ga0501069_0000274 3300049585 Bacteria 23403
182 Ga0501069_0012562 3300049585 Bacteria 4502
183 Ga0501070_0012589 3300049586 Bacteria 7137
184 Ga0501070_0025946 3300049586 Bacteria 4916
185 Ga0501071_0000712 3300049587 Bacteria 17456
186 Ga0501071_0019004 3300049587 Bacteria 4767
187 Ga0501072_0000600 3300049588 Bacteria 25969
188 Ga0501072_0003371 3300049588 Bacteria 12014
189 Ga0501072_0004076 3300049588 Bacteria 11054
190 Ga0501072_0012912 3300049588 Bacteria 6387
191 Ga0501073_0004895 3300049589 Bacteria 10051
192 Ga0501073_0085204 3300049589 Bacteria 2199
193 Ga0501074_0000215 3300049590 Bacteria 31741
194 Ga0501074_0039806 3300049590 Bacteria 3404
195 Ga0501075_0000006 3300049591 Bacteria 111683
196 Ga0501075_0001840 3300049591 Bacteria 13995
197 Ga0501075_0005533 3300049591 Bacteria 8643
198 Ga0501076_0001522 3300049592 Bacteria 15527
199 Ga0501076_0014622 3300049592 Bacteria 5917
200 Ga0501077_0000048 3300049593 Bacteria 61935
201 Ga0501077_0001870 3300049593 Bacteria 12732
202 Ga0501079_0000902 3300049741 Bacteria 20349
203 Ga0501079_0001040 3300049741 Bacteria 19219
204 Ga0501079_0011414 3300049741 Bacteria 6780
205 Ga0501080_0000026 3300049742 Bacteria 89548
206 Ga0501080_0011393 3300049742 Bacteria 8145
207 Ga0501080_0048857 3300049742 Bacteria 3937
208 Ga0501081_0000069 3300049743 Bacteria 39558
209 Ga0501081_0005832 3300049743 Bacteria 7969
210 Ga0501083_0001321 3300049744 Bacteria 16805
211 Ga0501083_0013182 3300049744 Bacteria 5777
212 Ga0501035_0000499 3300049822 Bacteria 44174
213 Ga0501044_0002570 3300049823 Bacteria 20675
214 Ga0501044_0041991 3300049823 Bacteria 4760
215 Ga0501044_0078901 3300049823 Bacteria 3337
216 Ga0501045_0000110 3300049824 Bacteria 41325
217 Ga0501045_0002430 3300049824 Bacteria 12668
218 Ga0501045_0009119 3300049824 Bacteria 6930
219 nmdc:mga05p37_2652_c1 3300050507 Bacteria 20834
220 nmdc:mga05p37_29911_c1 3300050507 Bacteria 6647
221 nmdc:mga05p37_86600_c1 3300050507 Bacteria 3861
222 nmdc:mga09592_23164_c1 3300050508 Bacteria 5127
223 nmdc:mga09592_43254_c1 3300050508 Bacteria 3791
224 nmdc:mga09592_44742_c1 3300050508 Bacteria 3727
225 nmdc:mga09592_60621_c1 3300050508 Bacteria 3199
226 nmdc:mga09592_7370_c1 3300050508 Bacteria 8943
227 nmdc:mga0qj67_6222_c1 3300050509 Bacteria 8763
228 nmdc:mga06r32_13055_c1 3300050510 Bacteria 7516
229 nmdc:mga08y16_70117_c1 3300050511 Bacteria 3654
230 nmdc:mga0rr50_45077_c1 3300050513 Bacteria 3238
231 Ga0500635_0000609 3300053080 Bacteria 9387
232 Ga0495619_0030436 3300053085 Bacteria 3495
233 Ga0500566_0001847 3300053094 Bacteria 12458
234 Ga0500640_008693 3300053095 Bacteria 4025
235 Ga0500562_008612 3300053108 Bacteria 2578
236 Ga0500595_000015 3300053119 Bacteria 224592
237 Ga0500597_001659 3300053120 Bacteria 5765
238 Ga0500614_001123 3300053123 Bacteria 6589
239 Ga0500636_0022742 3300053177 Bacteria 3706
240 Ga0501084_0000105 3300054114 Bacteria 62464
241 Ga0501084_0002078 3300054114 Bacteria 15981
242 Ga0501084_0002637 3300054114 Bacteria 14452
243 Ga0501084_0006620 3300054114 Bacteria 9529
244 Ga0501084_0036230 3300054114 Bacteria 4121
245 Ga0501082_0000645 3300060353 Bacteria 30754
246 Ga0501082_0002754 3300060353 Bacteria 15358
247 Ga0501082_0035410 3300060353 Bacteria 4302
248 Ga0530510_0000145 3300061734 Bacteria 41886
249 Ga0530510_0001130 3300061734 Bacteria 17735
250 Ga0530510_0001571 3300061734 Bacteria 15385
251 Ga0530510_0045001 3300061734 Bacteria 3189
252 2511178596 2510917027 Bacteria 5287437
253 2512637845 2512564013 Bacteria 6286191
254 2915603013 2915597211 Bacteria 6475886
255 2915611825 2915606848 Bacteria 6032732
256 2929188074 2929183550 Bacteria 6377511
257 8054802163 8054795415 Bacteria 9785225
258 Ga0500639_004064
259 JGI25406J46586_10019168
260 Ga0070683_100050077
261 Ga0070690_100030041
262 Ga0070682_100054825
263 Ga0070668_100057752
264 Ga0070688_100047181
265 Ga0070714_100068040
266 Ga0070678_100002821
267 Ga0070681_10000921
268 Ga0070706_100025948
269 Ga0070698_100004184
270 Ga0070684_100004414
271 Ga0070684_100009365
272 Ga0070684_100025079
273 Ga0070697_100047784
274 Ga0070664_100037077
275 Ga0070664_100129732
276 Ga0068857_100000231
277 Ga0068857_100001406
278 Ga0068857_100039576
279 Ga0070702_100041436
280 Ga0068859_100031786
281 Ga0068861_100086267
282 Ga0081455_10003746
283 Ga0081455_10016571
284 Ga0081455_10046607
285 Ga0081538_10000677
286 Ga0081538_10001893
287 Ga0081538_10041931
288 Ga0081540_1011431
289 Ga0081539_10000397
290 Ga0081539_10003790
291 Ga0075365_10010552
292 Ga0075428_100010938
293 Ga0075428_100012199
294 Ga0075428_100019175
295 Ga0075428_100129018
296 Ga0075430_100051713
297 Ga0075431_100017646
298 Ga0075431_100065812
299 Ga0075431_100086732
300 Ga0075429_100002948
301 Ga0075429_100008509
302 Ga0075429_100019893
303 Ga0075429_100026221
304 Ga0075429_100037721
305 Ga0097620_100031786
306 Ga0111539_10002849
307 Ga0111539_10009128
308 Ga0105245_10000019
309 Ga0105245_10021311
310 Ga0105245_10023111
311 Ga0114129_10001817
312 Ga0114129_10004682
313 Ga0114129_10026802
314 Ga0114129_10048920
315 Ga0105249_10007199
316 Ga0163163_10039425
317 Ga0157380_10041483
318 Ga0157379_10044289
319 Ga0157376_10000621
320 Ga0207688_10014968
321 Ga0207707_10018407
322 Ga0207687_10000209
323 Ga0207687_10014497
324 Ga0207711_10128679
325 Ga0207661_10007464
326 Ga0207661_10060149
327 Ga0207661_10067157
328 Ga0207679_10042681
329 Ga0207668_10077334
330 Ga0207674_10000602
331 Ga0207674_10001034
332 Ga0207674_10038596
333 Ga0207675_100002740
334 Ga0207675_100037510
335 Ga0207675_100061172
336 Ga0207683_10004622
337 Ga0207428_10005704
338 Ga0207428_10008092
339 Ga0207428_10031272
340 Ga0207428_10032779
341 Ga0268264_10132955
342 Ga0307517_10030651
343 Ga0307515_10008246
344 Ga0265338_10029637
345 Ga0265316_10018453
346 Ga0307509_10000040
347 Ga0307509_10018598
348 Ga0307508_10003185
349 Ga0316579_10020484
350 Ga0265314_10002077
351 Ga0316576_10042358
352 Ga0316578_10019395
353 Ga0307516_10000540
354 Ga0307516_10063835
355 Ga0307406_10037408
356 Ga0307407_10029456
357 Ga0307409_100029855
358 Ga0307414_10008441
359 Ga0307411_10088774
360 Ga0307415_100039118
361 Ga0373949_0000202
362 Ga0373936_0000054
363 Ga0373941_0000131
364 Ga0373961_0000146
365 Ga0316582_0010948
366 Ga0316582_0023765
367 Ga0395899_0005039
368 Ga0395899_0032867
369 Ga0395900_0009932
370 Ga0395900_0033394
371 Ga0395900_0045678
372 Ga0395900_0068526
373 Ga0395898_0012238
374 Ga0395898_0013432
375 Ga0395898_0014970
376 Ga0395898_0152709
377 Ga0395905_0016922
378 Ga0395901_0048639
379 Ga0395901_0131706
380 Ga0436365_1265074
381 Ga0451576_0053750
382 Ga0495582_0004218
383 Ga0495597_0031737
384 Ga0495659_0018930
385 Ga0495588_0010653
386 Ga0495669_0022105
387 Ga0495613_0033750
388 Ga0495581_0005695
389 Ga0495676_0052887
390 Ga0495686_0006343
391 Ga0496102_0057906
392 Ga0496108_0016224
393 Ga0496109_0005181
394 Ga0496109_0006851
395 Ga0496110_0000980
396 Ga0496110_0007640
397 Ga0496110_0050925
398 Ga0496111_0000694
399 Ga0496111_0006363
400 Ga0496111_0081705
401 Ga0501031_0000184
402 Ga0501031_0012894
403 Ga0501032_0001991
404 Ga0501032_0011473
405 Ga0501033_0000196
406 Ga0501033_0020590
407 Ga0501034_0004633
408 Ga0501034_0023298
409 Ga0501036_0003075
410 Ga0501036_0008704
411 Ga0501036_0009187
412 Ga0501037_0003828
413 Ga0501038_0002399
414 Ga0501038_0032955
415 Ga0501038_0108423
416 Ga0501039_0088312
417 Ga0501040_0000239
418 Ga0501040_0003027
419 Ga0501040_0005095
420 Ga0501041_0000184
421 Ga0501041_0030884
422 Ga0501042_0000014
423 Ga0501042_0000366
424 Ga0501042_0003494
425 Ga0501043_0000092
426 Ga0501046_0006406
427 Ga0501046_0009400
428 Ga0501046_0022171
429 Ga0501047_0000396
430 Ga0501047_0001396
431 Ga0501047_0006284
432 Ga0501048_0001148
433 Ga0501048_0004261
434 Ga0501048_0023337
435 Ga0501048_0036324
436 Ga0501068_0000009
437 Ga0501068_0062318
438 Ga0501069_0000274
439 Ga0501069_0012562
440 Ga0501070_0012589
441 Ga0501070_0025946
442 Ga0501071_0000712
443 Ga0501071_0019004
444 Ga0501072_0000600
445 Ga0501072_0003371
446 Ga0501072_0004076
447 Ga0501072_0012912
448 Ga0501073_0004895
449 Ga0501073_0085204
450 Ga0501074_0000215
451 Ga0501074_0039806
452 Ga0501075_0000006
453 Ga0501075_0001840
454 Ga0501075_0005533
455 Ga0501076_0001522
456 Ga0501076_0014622
457 Ga0501077_0000048
458 Ga0501077_0001870
459 Ga0501079_0000902
460 Ga0501079_0001040
461 Ga0501079_0011414
462 Ga0501080_0000026
463 Ga0501080_0011393
464 Ga0501080_0048857
465 Ga0501081_0000069
466 Ga0501081_0005832
467 Ga0501083_0001321
468 Ga0501083_0013182
469 Ga0501035_0000499
470 Ga0501044_0002570
471 Ga0501044_0041991
472 Ga0501044_0078901
473 Ga0501045_0000110
474 Ga0501045_0002430
475 Ga0501045_0009119
476 nmdc:mga05p37_2652_c1
477 nmdc:mga05p37_29911_c1
478 nmdc:mga05p37_86600_c1
479 nmdc:mga09592_23164_c1
480 nmdc:mga09592_43254_c1
481 nmdc:mga09592_44742_c1
482 nmdc:mga09592_60621_c1
483 nmdc:mga09592_7370_c1
484 nmdc:mga0qj67_6222_c1
485 nmdc:mga06r32_13055_c1
486 nmdc:mga08y16_70117_c1
487 nmdc:mga0rr50_45077_c1
488 Ga0500635_0000609
489 Ga0495619_0030436
490 Ga0500566_0001847
491 Ga0500640_008693
492 Ga0500562_008612
493 Ga0500595_000015
494 Ga0500597_001659
495 Ga0500614_001123
496 Ga0500636_0022742
497 Ga0501084_0000105
498 Ga0501084_0002078
499 Ga0501084_0002637
500 Ga0501084_0006620
501 Ga0501084_0036230
502 Ga0501082_0000645
503 Ga0501082_0002754
504 Ga0501082_0035410
505 Ga0530510_0000145
506 Ga0530510_0001130
507 Ga0530510_0001571
508 Ga0530510_0045001
509 2511178596
510 2512637845
511 2915603013
512 2915611825
513 2929188074
514 8054802163

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02719

Polysacc_synt_2

Polysaccharide biosynthesis protein

292

576

0.97

PF16363

GDP_Man_Dehyd

GDP-mannose 4,6 dehydratase

293

460

0.93

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

292

512

0.88

PF04321

RmlD_sub_bind

RmlD substrate binding domain

290

481

0.87

PF01073

3Beta_HSD

3-beta hydroxysteroid dehydrogenase/isomerase family

293

445

0.8

PF13727

CoA_binding_3

CoA-binding domain

65

247

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
5bjv-assembly1.cif.gz_B x-ray structure of the pglf udp-n-acetylglucosamine 4,6-dehydratase from campylobacterjejuni, d396n/k397a variant in complex with udp-n-acrtylglucosamine 0.9526 264 611
5bju-assembly1.cif.gz_B x-ray structure of the pglf dehydratase from campylobacter jejuni in complex with udp and nad(h) 0.9475 264 611
5bjx-assembly1.cif.gz_A x-ray structure of the pglf 4,6-dehydratase from campylobacter jejuni, variant t395v, in complex with udp 0.945 264 611
5bjy-assembly1.cif.gz_B x-ray structure of the pglf 4,5-dehydratase from campylobacter jejuni, variant m405y, in complex with udp 0.9446 264 611
5bjv-assembly1.cif.gz_B x-ray structure of the pglf udp-n-acetylglucosamine 4,6-dehydratase from campylobacterjejuni, d396n/k397a variant in complex with udp-n-acrtylglucosamine 0.9389 264 611
ID Description Score Start End Superfamily
2gn9B01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9458 286 511 3.40.50.720
af_Q2G1K5_279_602_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9447 286 608 3.40.50.720
6bwcE01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9416 284 511 3.40.50.720
4g5hA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9345 284 512 3.40.50.720
af_Q2G1K5_279_602_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9305 286 608 3.40.50.720
ID Description Score Start End GO Terms
AF-X1B694-F1-model_v4 Polysaccharide biosynthesis protein CapD-like domain-containing protein 0.9833 297 570
AF-A0A1V5LNQ4-F1-model_v4 UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase (EC 4.2.1.135) 0.9821 352 534 GO:0016829
AF-A0A1F2SSE4-F1-model_v4 Polysaccharide biosynthesis protein CapD-like domain-containing protein 0.9777 292 432
AF-A0A2G4FBW9-F1-model_v4 Capsule biosynthesis protein CapD 0.9761 275 609
AF-A0A1V5HSL7-F1-model_v4 UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase (EC 4.2.1.135) 0.9748 261 609 GO:0016829

Map