F367779

General Info

Members Datasets Scaffolds Average Seq Length
258 201 516 260

Family's Representative Sequence

Representative Sequence 3300003323|rootH1_10014461|rootH1_100144614
Length 295
Sequence METVFNTHISRSLYTNLSIHALFFFKLKQAMENNQKYALITGATSGIGYELAKLFANDQYNLIIVARDMTELESRAREFSEKGIDVVAIPCDLSRIDEAKRLCSDVQQRNLPVHILVNDAGQGLYGLFQDTELDRELDIVHLNICATLILTKCFLRQMVSRNEGKILNLASIASRTPGPWQSVYHGTKAFVLSFSEAIRTELKDTNISVTALMPGPTDTGFFNKAEMQDSKIVQDKSSLSDPAQVAKDGYDALMSGKDHVVSGFKNKLMMLAADITPDETLSGSMAKMQEPVNHE

Samples

Sample ID Description Type Environment
1 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
5 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
10 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
11 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
14 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
15 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
16 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
17 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
20 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
21 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
22 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
23 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
24 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
25 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
26 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
27 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
28 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
29 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
30 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
31 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
32 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
33 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
34 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
35 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
37 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
38 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
39 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
40 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
41 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
42 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
43 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
44 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
46 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
47 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
48 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
49 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
50 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
51 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
52 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
53 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
54 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
55 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
56 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
57 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
58 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
59 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
60 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
61 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
62 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
63 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
64 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
65 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
91 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
92 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
93 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
94 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
95 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
96 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
97 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
98 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
99 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
100 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
101 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
102 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
103 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
104 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
105 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
106 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
107 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
108 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
109 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
110 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
111 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
112 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
113 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
114 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
115 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
116 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
117 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
118 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
119 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
120 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
121 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
122 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
123 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
124 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
125 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
126 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
127 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
128 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
129 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
130 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
131 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
132 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
133 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
134 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
135 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
136 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
137 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
138 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
139 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
140 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
141 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
142 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
143 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
144 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
145 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
146 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
147 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
148 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
149 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
150 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
151 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
152 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
153 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
154 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
155 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
156 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
157 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
158 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
159 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
160 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
161 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
162 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
163 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
164 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
165 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
166 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
167 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
168 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
169 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
170 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
171 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
172 3300049650 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G3_A_0_drought Metagenome Rhizosphere
173 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
174 3300049662 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control Metagenome Rhizosphere
175 3300049671 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_A_3_drought Metagenome Rhizosphere
176 3300049674 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F11_A_3_drought Metagenome Rhizosphere
177 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
178 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
179 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
180 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
181 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
182 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
183 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
184 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
185 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
186 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
187 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
188 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
189 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
190 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
191 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
192 2739367857 Flavobacterium sp. GV029 Isolate Unclassified
193 2739367858 Flavobacterium sp. GV028 Isolate Unclassified
194 2857613821 Flavobacterium sp. R-72247 Isolate Unclassified
195 2857618242 Flavobacterium sp. R-74482 Isolate Unclassified
196 2881359912 Flavobacterium ustbae T13 Isolate Rhizosphere
197 2896317667 Sphingobacterium sp. SGR-19 Isolate Rhizosphere
198 2904419702 Flavobacterium sp. 1355 Isolate Rhizosphere
199 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
200 2958512119 Flavobacterium sp. Sd200 Isolate Rhizosphere
201 2977232053 Mucilaginibacter terrae SORGH_AS 422 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 96.12
Metatranscriptomes 0
Isolates 3.88

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.33
Nodule 0.78
Rhizoplane 5.04
Rhizosphere 85.66
Stem 0
Stem Tuber 0
Unclassified 6.59

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10014461 3300003323 Bacteria 4068
2 rootL2_10016477 3300003322 Bacteria 20601
3 rootL2_10102043 3300003322 Unclassified 1436
4 rootL2_10104335 3300003322 Bacteria 2938
5 rootL2_10131176 3300003322 Bacteria 3319
6 rootL2_10351299 3300003322 Bacteria 1279
7 rootH1_10089326 3300003323 Bacteria 11238
8 rootH1_10136210 3300003323 Bacteria 3020
9 Ga0065714_10064828 3300005288 Bacteria 17523
10 Ga0065714_10080679 3300005288 Bacteria 2423
11 Ga0065714_10132203 3300005288 Bacteria 1240
12 Ga0065704_10179010 3300005289 Bacteria 1247
13 Ga0070676_10088976 3300005328 Bacteria 1888
14 Ga0070683_100016239 3300005329 Bacteria 6560
15 Ga0068869_100128648 3300005334 Bacteria 1944
16 Ga0068868_100160837 3300005338 Bacteria 1854
17 Ga0068868_100229380 3300005338 Bacteria 1557
18 Ga0068868_100302779 3300005338 Bacteria 1358
19 Ga0068868_100405169 3300005338 Unclassified 1178
20 Ga0070661_100147324 3300005344 Bacteria 1778
21 Ga0070671_100074946 3300005355 Bacteria 2827
22 Ga0070671_100171367 3300005355 Bacteria 1836
23 Ga0070673_100346470 3300005364 Bacteria 1317
24 Ga0070673_100532383 3300005364 Bacteria 1066
25 Ga0070714_100446915 3300005435 Bacteria 1227
26 Ga0070713_100076091 3300005436 Bacteria 2849
27 Ga0070711_100242592 3300005439 Bacteria 1409
28 Ga0070678_100197354 3300005456 Bacteria 1658
29 Ga0070662_100082193 3300005457 Bacteria 2402
30 Ga0070662_100357885 3300005457 Bacteria 1197
31 Ga0070681_10104567 3300005458 Bacteria 2774
32 Ga0070679_100081708 3300005530 Bacteria 3221
33 Ga0070684_100125712 3300005535 Bacteria 2309
34 Ga0070684_100200615 3300005535 Bacteria 1817
35 Ga0070693_100019521 3300005547 Bacteria 3555
36 Ga0068855_100012723 3300005563 Bacteria 10148
37 Ga0070664_100109813 3300005564 Bacteria 2406
38 Ga0070664_100636946 3300005564 Unclassified 990
39 Ga0068854_100044085 3300005578 Bacteria 3165
40 Ga0068856_100004634 3300005614 Bacteria 13657
41 Ga0068856_100163385 3300005614 Bacteria 2238
42 Ga0070702_100036639 3300005615 Bacteria 2719
43 Ga0068852_100304803 3300005616 Bacteria 1543
44 Ga0068859_100066138 3300005617 Bacteria 3650
45 Ga0068864_100452022 3300005618 Bacteria 1229
46 Ga0068866_10147331 3300005718 Bacteria 1359
47 Ga0068870_10106935 3300005840 Bacteria 1591
48 Ga0070717_10052477 3300006028 Bacteria 3359
49 Ga0075364_10007726 3300006051 Bacteria 6401
50 Ga0070712_100200168 3300006175 Unclassified 1568
51 Ga0075366_10007510 3300006195 Bacteria 6026
52 Ga0097621_100166857 3300006237 Bacteria 1896
53 Ga0068871_100053484 3300006358 Bacteria 3273
54 Ga0075434_100000092 3300006871 Bacteria 49425
55 Ga0068865_100102267 3300006881 Bacteria 2100
56 Ga0075436_100053500 3300006914 Bacteria 2787
57 Ga0097620_100066135 3300006931 Bacteria 3650
58 Ga0079104_1000212 3300006946 Bacteria 81715
59 Ga0075435_100053528 3300007076 Bacteria 3255
60 Ga0105240_10242300 3300009093 Bacteria 2090
61 Ga0111539_10690441 3300009094 Bacteria 1188
62 Ga0105245_10037372 3300009098 Bacteria 4316
63 Ga0105247_10009258 3300009101 Bacteria 5984
64 Ga0105243_10271448 3300009148 Bacteria 1523
65 Ga0105241_10055259 3300009174 Bacteria 3041
66 Ga0105242_10105198 3300009176 Bacteria 2397
67 Ga0105238_10166489 3300009551 Bacteria 2180
68 Ga0105249_10033645 3300009553 Bacteria 4641
69 Ga0157373_10024484 3300013100 Unclassified 4372
70 Ga0157371_10244350 3300013102 Bacteria 1292
71 Ga0157371_10328413 3300013102 Bacteria 1111
72 Ga0157370_10053029 3300013104 Bacteria 3869
73 Ga0157374_10043994 3300013296 Bacteria 4126
74 Ga0157374_10123376 3300013296 Unclassified 2502
75 Ga0163162_10079784 3300013306 Bacteria 3339
76 Ga0163162_10085208 3300013306 Bacteria 3236
77 Ga0163162_10279673 3300013306 Bacteria 1801
78 Ga0157372_10000929 3300013307 Bacteria 31922
79 Ga0157372_10024903 3300013307 Bacteria 6504
80 Ga0157372_10070579 3300013307 Bacteria 3931
81 Ga0157372_10429205 3300013307 Bacteria 1540
82 Ga0163163_10087084 3300014325 Bacteria 3133
83 Ga0163163_10214671 3300014325 Bacteria 1973
84 Ga0163163_10296883 3300014325 Unclassified 1668
85 Ga0157380_11018727 3300014326 Unclassified 862
86 Ga0157377_10004185 3300014745 Bacteria 6595
87 Ga0157377_10155424 3300014745 Bacteria 1418
88 Ga0157379_10072899 3300014968 Bacteria 3073
89 Ga0157376_10468718 3300014969 Bacteria 1232
90 Ga0182006_1014540 3300015261 Bacteria 3390
91 Ga0163161_10005791 3300017792 Bacteria 8569
92 Ga0207692_10180593 3300025898 Unclassified 1229
93 Ga0207710_10119372 3300025900 Bacteria 1258
94 Ga0207688_10012889 3300025901 Bacteria 4544
95 Ga0207680_10226881 3300025903 Bacteria 1282
96 Ga0207645_10104462 3300025907 Bacteria 1830
97 Ga0207643_10064939 3300025908 Bacteria 2090
98 Ga0207707_10034058 3300025912 Bacteria 4457
99 Ga0207671_10022660 3300025914 Bacteria 4745
100 Ga0207693_10015629 3300025915 Bacteria 6086
101 Ga0207657_10030998 3300025919 Bacteria 4847
102 Ga0207652_10458849 3300025921 Bacteria 1148
103 Ga0207650_10004551 3300025925 Bacteria 9485
104 Ga0207650_10182041 3300025925 Unclassified 1675
105 Ga0207650_10331139 3300025925 Bacteria 1249
106 Ga0207687_10000380 3300025927 Bacteria 29866
107 Ga0207687_10009099 3300025927 Bacteria 6494
108 Ga0207664_10145433 3300025929 Bacteria 2009
109 Ga0207664_10346841 3300025929 Bacteria 1313
110 Ga0207644_10066614 3300025931 Bacteria 2623
111 Ga0207706_10094152 3300025933 Bacteria 2635
112 Ga0207704_10215796 3300025938 Bacteria 1416
113 Ga0207665_10057607 3300025939 Bacteria 2625
114 Ga0207689_10069947 3300025942 Bacteria 2884
115 Ga0207651_10345815 3300025960 Bacteria 1251
116 Ga0207658_10414140 3300025986 Bacteria 1187
117 Ga0207677_10015080 3300026023 Bacteria 4534
118 Ga0207677_10269596 3300026023 Bacteria 1392
119 Ga0207702_10015225 3300026078 Bacteria 6375
120 Ga0207683_10126543 3300026121 Bacteria 2296
121 Ga0207698_10109944 3300026142 Bacteria 2307
122 Ga0207698_10579382 3300026142 Bacteria 1104
123 Ga0209281_1000309 3300027111 Bacteria 87279
124 Ga0307515_10000408 3300028794 Bacteria 103931
125 Ga0307515_10131696 3300028794 Bacteria 2749
126 Ga0307513_10317385 3300031456 Bacteria 1318
127 Ga0307405_10000021 3300031731 Bacteria 155876
128 Ga0307413_10003000 3300031824 Bacteria 7000
129 Ga0307410_10000012 3300031852 Bacteria 79112
130 Ga0307406_10000429 3300031901 Bacteria 24463
131 Ga0307412_10659281 3300031911 Bacteria 893
132 Ga0307414_10000001 3300032004 Bacteria 1352954
133 Ga0307414_10000187 3300032004 Bacteria 42062
134 Ga0307414_10035388 3300032004 Unclassified 3323
135 Ga0307414_10047336 3300032004 Bacteria 2958
136 Ga0307414_10047644 3300032004 Bacteria 2951
137 Ga0307414_10062070 3300032004 Bacteria 2650
138 Ga0307411_10082349 3300032005 Bacteria 2219
139 Ga0373944_0002777 3300035089 Bacteria 4478
140 Ga0373936_0012644 3300035113 Bacteria 3213
141 Ga0373945_0161290 3300035116 Bacteria 914
142 Ga0373956_0248589 3300035119 Bacteria 845
143 Ga0373943_0003904 3300035170 Bacteria 6787
144 Ga0373946_0008759 3300035171 Bacteria 3714
145 Ga0373927_0055898 3300035695 Bacteria 2551
146 Ga0373933_0043635 3300035724 Bacteria 2654
147 Ga0373947_0003539 3300035725 Bacteria 9228
148 Ga0373947_0019401 3300035725 Bacteria 3920
149 Ga0373937_0165839 3300036401 Bacteria 2071
150 Ga0373925_0028380 3300037068 Bacteria 4100
151 Ga0395899_0000450 3300037312 Bacteria 47044
152 Ga0395900_0281147 3300037418 Unclassified 1656
153 Ga0395905_0000001 3300037471 Bacteria 2037079
154 Ga0495603_0056805 3300046455 Bacteria 2316
155 Ga0495590_0004335 3300046457 Bacteria 5737
156 Ga0495629_0005972 3300046459 Bacteria 9059
157 Ga0495641_0064719 3300046461 Bacteria 1646
158 Ga0495641_0121715 3300046461 Bacteria 1164
159 Ga0495653_0148903 3300046463 Bacteria 1637
160 Ga0495650_0021734 3300046471 Bacteria 3090
161 Ga0495580_0043326 3300046472 Bacteria 3203
162 Ga0495639_0000803 3300046475 Bacteria 14367
163 Ga0495639_0183530 3300046475 Bacteria 1019
164 Ga0495662_0001225 3300046476 Bacteria 12632
165 Ga0495594_0005797 3300046499 Bacteria 6340
166 Ga0495606_0113832 3300046507 Unclassified 1628
167 Ga0495608_0015011 3300046511 Bacteria 5375
168 Ga0495618_0025515 3300046514 Bacteria 3668
169 Ga0495630_0036203 3300046517 Bacteria 3689
170 Ga0495630_0046644 3300046517 Bacteria 3239
171 Ga0495630_0523617 3300046517 Bacteria 909
172 Ga0495666_0008419 3300046526 Bacteria 5172
173 Ga0495652_0285205 3300046529 Bacteria 1207
174 Ga0495665_0005089 3300046531 Bacteria 7089
175 Ga0495640_0023521 3300046533 Bacteria 4485
176 Ga0495586_0071214 3300046535 Bacteria 1899
177 Ga0495586_0362279 3300046535 Bacteria 833
178 Ga0495587_0039168 3300046536 Bacteria 2838
179 Ga0495645_0261399 3300046543 Bacteria 1146
180 Ga0495667_0054858 3300046559 Bacteria 2621
181 Ga0495634_0212859 3300046642 Bacteria 1195
182 Ga0495635_0033275 3300046663 Bacteria 3575
183 Ga0495588_0036550 3300046674 Bacteria 2492
184 Ga0495588_0065645 3300046674 Bacteria 1883
185 Ga0495657_0025286 3300046675 Bacteria 4219
186 Ga0495646_0054524 3300046680 Bacteria 2404
187 Ga0495647_0001669 3300046681 Bacteria 6870
188 Ga0495658_0019391 3300046683 Bacteria 3549
189 Ga0495624_0005048 3300046690 Bacteria 9546
190 Ga0495624_0038362 3300046690 Bacteria 3078
191 Ga0495600_0017730 3300046809 Bacteria 4531
192 Ga0495581_0004932 3300047315 Bacteria 7722
193 Ga0495581_0024137 3300047315 Bacteria 3523
194 Ga0495604_0132932 3300047317 Bacteria 1786
195 Ga0495674_0017155 3300047319 Bacteria 6744
196 Ga0495674_0048551 3300047319 Bacteria 3755
197 Ga0495674_0205781 3300047319 Bacteria 1631
198 Ga0495672_0047318 3300047320 Bacteria 2559
199 Ga0495676_0006333 3300047321 Bacteria 10899
200 Ga0495676_0027278 3300047321 Bacteria 4899
201 Ga0495676_0103390 3300047321 Bacteria 2103
202 Ga0495680_0032845 3300047322 Bacteria 4207
203 Ga0495675_0098625 3300047444 Bacteria 1830
204 Ga0495593_0004216 3300047673 Bacteria 8546
205 Ga0495614_0002338 3300048089 Bacteria 8439
206 Ga0496101_0010520 3300048904 Bacteria 6110
207 Ga0496102_0027349 3300048905 Bacteria 5093
208 Ga0496103_0069442 3300048906 Bacteria 2202
209 Ga0496106_0009228 3300048909 Bacteria 7287
210 Ga0496108_0019389 3300048911 Bacteria 5584
211 Ga0496109_0003583 3300048912 Bacteria 12962
212 Ga0496110_0000596 3300048913 Bacteria 24811
213 Ga0496111_0022678 3300048914 Bacteria 4397
214 Ga0496111_0565562 3300048914 Bacteria 834
215 Ga0496112_0092184 3300048915 Bacteria 2999
216 Ga0496114_0150124 3300048917 Bacteria 2021
217 Ga0496114_0462124 3300048917 Bacteria 1124
218 Ga0496115_0185573 3300048918 Bacteria 1718
219 Ga0501032_0003905 3300049569 Bacteria 11307
220 Ga0501033_0104209 3300049570 Unclassified 2068
221 Ga0501034_0292207 3300049571 Unclassified 1567
222 Ga0501036_0106265 3300049572 Unclassified 2374
223 Ga0501039_0012180 3300049575 Bacteria 6557
224 Ga0501043_0173741 3300049579 Unclassified 1680
225 Ga0501047_0024323 3300049581 Bacteria 5814
226 Ga0501199_001310 3300049650 Bacteria 2241
227 Ga0501202_030357 3300049652 Bacteria 1124
228 Ga0501222_002603 3300049662 Bacteria 2491
229 Ga0501238_000656 3300049671 Bacteria 3905
230 Ga0501242_002464 3300049674 Bacteria 1946
231 Ga0501249_000001 3300049679 Bacteria 268580
232 Ga0501249_000014 3300049679 Bacteria 137700
233 Ga0501257_001027 3300049686 Bacteria 5620
234 Ga0501259_003378 3300049688 Bacteria 2551
235 Ga0501225_0016495 3300049705 Bacteria 2054
236 Ga0501035_0016538 3300049822 Bacteria 6801
237 Ga0501044_0003041 3300049823 Bacteria 18988
238 nmdc:mga0k408_1134_c1 3300050493 Bacteria 14615
239 nmdc:mga0n895_36719_c1 3300050512 Bacteria 4734
240 nmdc:mga0rr50_9689_c1 3300050513 Bacteria 6074
241 Ga0495601_0168006 3300053077 Bacteria 1433
242 Ga0495612_0014625 3300053078 Bacteria 3154
243 Ga0495595_0012539 3300053084 Bacteria 3564
244 Ga0495619_0047023 3300053085 Bacteria 2839
245 Ga0495619_0100262 3300053085 Bacteria 1970
246 Ga0500616_0000043 3300053153 Bacteria 342930
247 Ga0500622_0000004 3300053156 Bacteria 557587
248 Ga0500622_0000005 3300053156 Bacteria 502443
249 2740001246 2739367857 Bacteria 5433684
250 2740006062 2739367858 Bacteria 5432813
251 2857614867 2857613821 Bacteria 4917088
252 2857618451 2857618242 Bacteria 5635925
253 2881363381 2881359912 Bacteria 4935907
254 2896317828 2896317667 Bacteria 4606601
255 2904421215 2904419702 Bacteria 5166287
256 2919440860 2919437846 Bacteria 6199444
257 2958513625 2958512119 Bacteria 4528530
258 2977233385 2977232053 Bacteria 5485925
259 rootH1_10014461
260 rootL2_10016477
261 rootL2_10102043
262 rootL2_10104335
263 rootL2_10131176
264 rootL2_10351299
265 rootH1_10089326
266 rootH1_10136210
267 Ga0065714_10064828
268 Ga0065714_10080679
269 Ga0065714_10132203
270 Ga0065704_10179010
271 Ga0070676_10088976
272 Ga0070683_100016239
273 Ga0068869_100128648
274 Ga0068868_100160837
275 Ga0068868_100229380
276 Ga0068868_100302779
277 Ga0068868_100405169
278 Ga0070661_100147324
279 Ga0070671_100074946
280 Ga0070671_100171367
281 Ga0070673_100346470
282 Ga0070673_100532383
283 Ga0070714_100446915
284 Ga0070713_100076091
285 Ga0070711_100242592
286 Ga0070678_100197354
287 Ga0070662_100082193
288 Ga0070662_100357885
289 Ga0070681_10104567
290 Ga0070679_100081708
291 Ga0070684_100125712
292 Ga0070684_100200615
293 Ga0070693_100019521
294 Ga0068855_100012723
295 Ga0070664_100109813
296 Ga0070664_100636946
297 Ga0068854_100044085
298 Ga0068856_100004634
299 Ga0068856_100163385
300 Ga0070702_100036639
301 Ga0068852_100304803
302 Ga0068859_100066138
303 Ga0068864_100452022
304 Ga0068866_10147331
305 Ga0068870_10106935
306 Ga0070717_10052477
307 Ga0075364_10007726
308 Ga0070712_100200168
309 Ga0075366_10007510
310 Ga0097621_100166857
311 Ga0068871_100053484
312 Ga0075434_100000092
313 Ga0068865_100102267
314 Ga0075436_100053500
315 Ga0097620_100066135
316 Ga0079104_1000212
317 Ga0075435_100053528
318 Ga0105240_10242300
319 Ga0111539_10690441
320 Ga0105245_10037372
321 Ga0105247_10009258
322 Ga0105243_10271448
323 Ga0105241_10055259
324 Ga0105242_10105198
325 Ga0105238_10166489
326 Ga0105249_10033645
327 Ga0157373_10024484
328 Ga0157371_10244350
329 Ga0157371_10328413
330 Ga0157370_10053029
331 Ga0157374_10043994
332 Ga0157374_10123376
333 Ga0163162_10079784
334 Ga0163162_10085208
335 Ga0163162_10279673
336 Ga0157372_10000929
337 Ga0157372_10024903
338 Ga0157372_10070579
339 Ga0157372_10429205
340 Ga0163163_10087084
341 Ga0163163_10214671
342 Ga0163163_10296883
343 Ga0157380_11018727
344 Ga0157377_10004185
345 Ga0157377_10155424
346 Ga0157379_10072899
347 Ga0157376_10468718
348 Ga0182006_1014540
349 Ga0163161_10005791
350 Ga0207692_10180593
351 Ga0207710_10119372
352 Ga0207688_10012889
353 Ga0207680_10226881
354 Ga0207645_10104462
355 Ga0207643_10064939
356 Ga0207707_10034058
357 Ga0207671_10022660
358 Ga0207693_10015629
359 Ga0207657_10030998
360 Ga0207652_10458849
361 Ga0207650_10004551
362 Ga0207650_10182041
363 Ga0207650_10331139
364 Ga0207687_10000380
365 Ga0207687_10009099
366 Ga0207664_10145433
367 Ga0207664_10346841
368 Ga0207644_10066614
369 Ga0207706_10094152
370 Ga0207704_10215796
371 Ga0207665_10057607
372 Ga0207689_10069947
373 Ga0207651_10345815
374 Ga0207658_10414140
375 Ga0207677_10015080
376 Ga0207677_10269596
377 Ga0207702_10015225
378 Ga0207683_10126543
379 Ga0207698_10109944
380 Ga0207698_10579382
381 Ga0209281_1000309
382 Ga0307515_10000408
383 Ga0307515_10131696
384 Ga0307513_10317385
385 Ga0307405_10000021
386 Ga0307413_10003000
387 Ga0307410_10000012
388 Ga0307406_10000429
389 Ga0307412_10659281
390 Ga0307414_10000001
391 Ga0307414_10000187
392 Ga0307414_10035388
393 Ga0307414_10047336
394 Ga0307414_10047644
395 Ga0307414_10062070
396 Ga0307411_10082349
397 Ga0373944_0002777
398 Ga0373936_0012644
399 Ga0373945_0161290
400 Ga0373956_0248589
401 Ga0373943_0003904
402 Ga0373946_0008759
403 Ga0373927_0055898
404 Ga0373933_0043635
405 Ga0373947_0003539
406 Ga0373947_0019401
407 Ga0373937_0165839
408 Ga0373925_0028380
409 Ga0395899_0000450
410 Ga0395900_0281147
411 Ga0395905_0000001
412 Ga0495603_0056805
413 Ga0495590_0004335
414 Ga0495629_0005972
415 Ga0495641_0064719
416 Ga0495641_0121715
417 Ga0495653_0148903
418 Ga0495650_0021734
419 Ga0495580_0043326
420 Ga0495639_0000803
421 Ga0495639_0183530
422 Ga0495662_0001225
423 Ga0495594_0005797
424 Ga0495606_0113832
425 Ga0495608_0015011
426 Ga0495618_0025515
427 Ga0495630_0036203
428 Ga0495630_0046644
429 Ga0495630_0523617
430 Ga0495666_0008419
431 Ga0495652_0285205
432 Ga0495665_0005089
433 Ga0495640_0023521
434 Ga0495586_0071214
435 Ga0495586_0362279
436 Ga0495587_0039168
437 Ga0495645_0261399
438 Ga0495667_0054858
439 Ga0495634_0212859
440 Ga0495635_0033275
441 Ga0495588_0036550
442 Ga0495588_0065645
443 Ga0495657_0025286
444 Ga0495646_0054524
445 Ga0495647_0001669
446 Ga0495658_0019391
447 Ga0495624_0005048
448 Ga0495624_0038362
449 Ga0495600_0017730
450 Ga0495581_0004932
451 Ga0495581_0024137
452 Ga0495604_0132932
453 Ga0495674_0017155
454 Ga0495674_0048551
455 Ga0495674_0205781
456 Ga0495672_0047318
457 Ga0495676_0006333
458 Ga0495676_0027278
459 Ga0495676_0103390
460 Ga0495680_0032845
461 Ga0495675_0098625
462 Ga0495593_0004216
463 Ga0495614_0002338
464 Ga0496101_0010520
465 Ga0496102_0027349
466 Ga0496103_0069442
467 Ga0496106_0009228
468 Ga0496108_0019389
469 Ga0496109_0003583
470 Ga0496110_0000596
471 Ga0496111_0022678
472 Ga0496111_0565562
473 Ga0496112_0092184
474 Ga0496114_0150124
475 Ga0496114_0462124
476 Ga0496115_0185573
477 Ga0501032_0003905
478 Ga0501033_0104209
479 Ga0501034_0292207
480 Ga0501036_0106265
481 Ga0501039_0012180
482 Ga0501043_0173741
483 Ga0501047_0024323
484 Ga0501199_001310
485 Ga0501202_030357
486 Ga0501222_002603
487 Ga0501238_000656
488 Ga0501242_002464
489 Ga0501249_000001
490 Ga0501249_000014
491 Ga0501257_001027
492 Ga0501259_003378
493 Ga0501225_0016495
494 Ga0501035_0016538
495 Ga0501044_0003041
496 nmdc:mga0k408_1134_c1
497 nmdc:mga0n895_36719_c1
498 nmdc:mga0rr50_9689_c1
499 Ga0495601_0168006
500 Ga0495612_0014625
501 Ga0495595_0012539
502 Ga0495619_0047023
503 Ga0495619_0100262
504 Ga0500616_0000043
505 Ga0500622_0000004
506 Ga0500622_0000005
507 2740001246
508 2740006062
509 2857614867
510 2857618451
511 2881363381
512 2896317828
513 2904421215
514 2919440860
515 2958513625
516 2977233385

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00106

adh_short

short chain dehydrogenase

36

230

0.98

PF13561

adh_short_C2

Enoyl-(Acyl carrier protein) reductase

42

247

0.91

PF08659

KR

KR domain

37

214

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
4y98-assembly1.cif.gz_A crystal structure of ligd-apo form from sphingobium sp. strain syk-6 0.9336 7 247
7e28-assembly1.cif.gz_A crystal structure of sdr family nad(p)-dependent oxidoreductase from exiguobacterium 0.9318 6 233
7e28-assembly1.cif.gz_B crystal structure of sdr family nad(p)-dependent oxidoreductase from exiguobacterium 0.9307 7 233
8g9v-assembly3.cif.gz_F crystal structures of 17-beta-hydroxysteroid dehydrogenase 13 0.9271 6 245
8g9v-assembly4.cif.gz_G crystal structures of 17-beta-hydroxysteroid dehydrogenase 13 0.9255 7 247
ID Description Score Start End Superfamily
af_A0A0R0HUJ2_8_65_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9878 8 57 3.40.50.720
af_F4J128_251_373_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9439 92 191 3.40.50.720
af_A0A0P0WVK1_53_257_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9398 8 167 3.40.50.720
af_Q10782_3_250_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9386 4 251 3.40.50.720
4y98A00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9336 7 247 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A0R1U7T6-F1-model_v4 Oxidoreductase, short chain dehydrogenase reductase family protein 0.9867 82 199 GO:0016020
GO:0016491
AF-D1AL41-F1-model_v4 NADP-dependent 3-hydroxy acid dehydrogenase YdfG (EC 1.1.1.298) (EC 1.1.1.381) (L-allo-threonine dehydrogenase) (Malonic semialdehyde reductase) 0.9788 6 257 GO:0016491
AF-A0A2M6VZX5-F1-model_v4 Short-chain dehydrogenase 0.9787 6 257 GO:0016491
AF-A0A2M7FFH7-F1-model_v4 Short-chain dehydrogenase 0.9757 1 259 GO:0016020
GO:0016491
AF-A0A154C397-F1-model_v4 deleted 0.9745 7 262

Map