F367944

General Info

Members Datasets Scaffolds Average Seq Length
258 198 517 281

Family's Representative Sequence

Representative Sequence 3300005563|Ga0068855_100008116|Ga0068855_1000081166
Length 281
Sequence MNTQIANDNLLGAYLRDRRERLDPVALGYPAGRRRTPGLRREEVAQRANVSATWYTWLEQGRGGAPSDEVLDRIARALLLGDVEREHLFLLALGRPPEIRYQASGEGPIPRLQGVLDAFTTSPAMVKTATWDVVAWNRAAAAVLTDYGKLEPAQRNVLRLMFCDPAVRAHQVDWESVARFVVAAFRLDAARAGAARSVQALVDELSERSPEFAAMWQSQDVRQYSGGTKHLRLPVLGTLALEYSCFVVDGYPDLSMVVYNPVTPEDAQRISQLIEASERQR

Samples

Sample ID Description Type Environment
1 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
2 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
3 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
4 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
5 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
6 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
7 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
8 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
9 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
10 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
11 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
12 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
13 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
14 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
15 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
16 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
17 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
18 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
19 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
20 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
21 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
22 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
23 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
24 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
25 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
26 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
27 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
28 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
29 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
30 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
32 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
33 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
34 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
35 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
36 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
37 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
38 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
39 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
40 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
41 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
42 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
43 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
44 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
45 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
46 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
47 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
48 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
49 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
50 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
51 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
53 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
54 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
56 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
72 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
73 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
74 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
75 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
76 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
77 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
78 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
79 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
80 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
81 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
82 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
83 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
84 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
85 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
86 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
87 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
88 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
89 3300044671 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - COA1E Metagenome Unclassified
90 3300044672 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - COA3E Metagenome Unclassified
91 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
92 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
93 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
94 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
95 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
96 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
97 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
98 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
99 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
100 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
101 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
102 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
103 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
104 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
105 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
106 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
107 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
108 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
109 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
110 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
111 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
112 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
113 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
114 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
115 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
116 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
117 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
118 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
119 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
120 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
121 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
122 3300048986 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1E Metagenome Unclassified
123 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
124 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
130 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
136 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
137 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
138 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
139 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
140 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
143 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
144 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
145 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
146 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
147 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
148 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
149 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
150 3300053162 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 endosphere Metagenome Endosphere
151 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
152 2508501009 Bradyrhizobium sp. WSM471 Isolate Nodule
153 2508501042 Bradyrhizobium sp. WSM1253 Isolate Nodule
154 2513237094 Bradyrhizobium sp. WSM3983 Isolate Nodule
155 2582581316 Agrobacterium rhizogenes OK036 Isolate Rhizosphere
156 2599185239 Burkholderia sp. NFACC38-1 Isolate Rhizoplane
157 2643221609 Acidovorax sp. Root217 Isolate Unclassified
158 2643221611 Acidovorax sp. Root219 Isolate Unclassified
159 2744054633 Bradyrhizobium neotropicale BR 10247 Isolate Unclassified
160 2744054900 Paraburkholderia ginsengiterrae DCY85-1 Isolate Unclassified
161 2744054901 Paraburkholderia ginsengiterrae DCY85 Isolate Unclassified
162 2816332133 Acidovorax radicis 2721A Isolate Unclassified
163 2818991452 Burkholderia cepacia 561 Isolate Unclassified
164 2824704595 Bradyrhizobium sp. HAMBI 2150 Isolate Unclassified
165 2824753945 Bradyrhizobium sp. HAMBI 2128 Isolate Unclassified
166 2824763712 Bradyrhizobium sp. HAMBI 2129 Isolate Unclassified
167 2838029111 Rhizobium tropici SEMIA 4079 Isolate Nodule
168 2842475841 Rhizobium tropici SEMIA 4059 Isolate Nodule
169 2842502639 Rhizobium tropici SEMIA 4063 Isolate Nodule
170 2863421361 Burkholderia cenocepacia CACua-24 Isolate Rhizosphere
171 2879099564 Bradyrhizobium japonicum UBMA197 Isolate Nodule
172 2904711408 Bradyrhizobium sp. USDA 3456 Isolate Unclassified
173 2906610324
174 2922425934
175 2928170801 Burkholderia sp. 572 Isolate Unclassified
176 2932809354 Bradyrhizobium sp. S3.5.5 Isolate Nodule
177 2932818245 Bradyrhizobium sp. S3.9.1 Isolate Nodule
178 2935648319 Bradyrhizobium sp. JR4.3 Isolate Nodule
179 2935656913 Bradyrhizobium sp. JR5.3 Isolate Nodule
180 2935760218 Bradyrhizobium sp. LA7.1 Isolate Nodule
181 2935769743 Bradyrhizobium sp. LB12.1 Isolate Nodule
182 2935785616 Bradyrhizobium sp. LB5.2 Isolate Nodule
183 2935793552 Bradyrhizobium sp. LB8.2 Isolate Nodule
184 2935984226 Bradyrhizobium sp. i1.15.2 Isolate Nodule
185 2936011229 Bradyrhizobium sp. JR1.1 Isolate Nodule
186 2936019824 Bradyrhizobium sp. JR1.5 Isolate Nodule
187 2936028420 Bradyrhizobium sp. JR1.7 Isolate Nodule
188 2936046547 Bradyrhizobium sp. JR3.12 Isolate Nodule
189 2936055302 Bradyrhizobium sp. JR4.1 Isolate Nodule
190 2941531003 Bradyrhizobium sp. LB11.1 Isolate Nodule
191 3005416602 Rhizobium sp. P40RR-XXII Isolate Rhizosphere
192 3005710791 Bradyrhizobium genosp. B BDV5040 Isolate Unclassified
193 8005314921 Rhizobium sp. P28RR-XV Isolate Rhizosphere
194 8005484373 Rhizobium tropici SARCC-755 Isolate Nodule
195 8005645114 Rhizobium tropici IGFRI Rhizo-19 Isolate Rhizosphere
196 8018845410 Burkholderia reimsis BE51 Isolate Rhizosphere
197 8021120328 Burkholderia sp. LS-044 Isolate Rhizosphere
198 8039098773 Burkholderia multivorans MSMB612WGS Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 82.42
Metatranscriptomes 0
Isolates 17.58

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 23.64
Nodule 8.91
Rhizoplane 1.55
Rhizosphere 55.81
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068855_100008116 3300005563 Bacteria 12689
2 JGI25162J39368_1000323 3300002737 Bacteria 41942
3 JGI25164J39214_1000032 3300002772 Bacteria 144465
4 JGI25165J46597_1000136 3300003214 Bacteria 122521
5 rootH1_10070420 3300003316 Bacteria 6631
6 rootH1_10070420 3300003323 Unclassified 3457
7 Ga0055532_1000405 3300003758 Bacteria 21201
8 Ga0055525_1000082 3300003759 Bacteria 159396
9 Ga0055527_1000087 3300003760 Bacteria 73140
10 Ga0055527_1000153 3300003760 Bacteria 48693
11 Ga0055527_1000722 3300003760 Bacteria 9429
12 Ga0055527_1009966 3300003760 Bacteria 1104
13 Ga0055535_1000316 3300003761 Bacteria 48693
14 Ga0055535_1000699 3300003761 Bacteria 25894
15 Ga0055535_1001551 3300003761 Bacteria 11211
16 Ga0055535_1001773 3300003761 Bacteria 9528
17 Ga0055542_1000203 3300003762 Bacteria 73119
18 Ga0055542_1000318 3300003762 Bacteria 51721
19 Ga0055542_1001706 3300003762 Bacteria 9528
20 Ga0055529_1001123 3300003763 Bacteria 11641
21 Ga0055529_1001693 3300003763 Bacteria 5684
22 Ga0055540_1007244 3300003792 Bacteria 4232
23 Ga0055531_10002019 3300003794 Bacteria 14056
24 Ga0065165_1004258 3300005262 Bacteria 9047
25 Ga0070658_10007044 3300005327 Bacteria 9071
26 Ga0070709_10070750 3300005434 Bacteria 2250
27 Ga0070711_100000471 3300005439 Bacteria 21056
28 Ga0070708_100363900 3300005445 Bacteria 1363
29 Ga0070706_100136612 3300005467 Bacteria 2288
30 Ga0070699_100105052 3300005518 Bacteria 2477
31 Ga0070699_100184423 3300005518 Bacteria 1852
32 Ga0070665_100606328 3300005548 Bacteria 1108
33 Ga0070704_100079921 3300005549 Bacteria 2404
34 Ga0068857_100096828 3300005577 Bacteria 2645
35 Ga0068854_100000144 3300005578 Bacteria 49698
36 Ga0068858_100433725 3300005842 Bacteria 1265
37 Ga0068862_100374378 3300005844 Bacteria 1327
38 Ga0105251_10000762 3300009011 Bacteria 29321
39 Ga0105250_10000041 3300009092 Bacteria 133571
40 Ga0105240_10002948 3300009093 Bacteria 26839
41 Ga0105240_10012363 3300009093 Bacteria 11788
42 Ga0114129_10390505 3300009147 Bacteria 1836
43 Ga0105243_10221002 3300009148 Bacteria 1674
44 Ga0105237_10000541 3300009545 Bacteria 53256
45 Ga0105239_10002977 3300010375 Bacteria 21129
46 Ga0182008_10001051 3300014497 Bacteria 19128
47 Ga0157379_10181160 3300014968 Bacteria 1903
48 Ga0157379_10305824 3300014968 Bacteria 1450
49 Ga0157376_10205352 3300014969 Bacteria 1816
50 Ga0182006_1000611 3300015261 Bacteria 25791
51 Ga0182005_1001472 3300015265 Bacteria 9445
52 Ga0209566_100223 3300025225 Bacteria 56415
53 Ga0209672_100004 3300025228 Bacteria 1467504
54 Ga0209672_100012 3300025228 Bacteria 795742
55 Ga0209672_100093 3300025228 Bacteria 115446
56 Ga0209672_104973 3300025228 Bacteria 2355
57 Ga0209147_100007 3300025229 Bacteria 795684
58 Ga0209147_100074 3300025229 Bacteria 208743
59 Ga0209147_100134 3300025229 Bacteria 118581
60 Ga0209563_100097 3300025230 Bacteria 159453
61 Ga0207427_100081 3300025231 Bacteria 144588
62 Ga0209437_100168 3300025233 Bacteria 144520
63 Ga0209258_100003 3300025242 Bacteria 1467504
64 Ga0209258_100014 3300025242 Bacteria 720132
65 Ga0209258_100209 3300025242 Bacteria 118581
66 Ga0209258_100412 3300025242 Bacteria 51830
67 Ga0209646_1001985 3300025246 Bacteria 4916
68 Ga0209148_1000016 3300025254 Bacteria 804369
69 Ga0209148_1000184 3300025254 Bacteria 118581
70 Ga0209148_1000287 3300025254 Bacteria 75762
71 Ga0209148_1000356 3300025254 Bacteria 58774
72 Ga0209148_1000390 3300025254 Bacteria 51830
73 Ga0209759_1006061 3300025256 Bacteria 4120
74 Ga0209233_1000151 3300025261 Bacteria 176515
75 Ga0209233_1002641 3300025261 Bacteria 6500
76 Ga0209565_1020106 3300025263 Bacteria 1414
77 Ga0209455_1000004 3300025272 Bacteria 1467504
78 Ga0209455_1000160 3300025272 Bacteria 118581
79 Ga0209455_1000466 3300025272 Bacteria 30456
80 Ga0209455_1003404 3300025272 Bacteria 5639
81 Ga0209455_1009510 3300025272 Bacteria 2547
82 Ga0209673_1000046 3300025273 Bacteria 289907
83 Ga0209758_1000217 3300025297 Bacteria 124619
84 Ga0209051_1000059 3300025303 Bacteria 260307
85 Ga0209257_1000022 3300025304 Bacteria 765258
86 Ga0207696_1000011 3300025711 Bacteria 530614
87 Ga0207713_1000771 3300025735 Bacteria 29598
88 Ga0207699_10008443 3300025906 Bacteria 5084
89 Ga0207705_10039320 3300025909 Bacteria 3390
90 Ga0207695_10019042 3300025913 Bacteria 7918
91 Ga0207695_10029940 3300025913 Bacteria 6004
92 Ga0207695_10465846 3300025913 Bacteria 1146
93 Ga0207671_10000883 3300025914 Bacteria 37968
94 Ga0207693_10062054 3300025915 Bacteria 2928
95 Ga0207663_10002631 3300025916 Bacteria 8645
96 Ga0207646_10142106 3300025922 Bacteria 2162
97 Ga0207667_10000082 3300025949 Bacteria 157749
98 Ga0207640_10000014 3300025981 Bacteria 219683
99 Ga0207640_10000016 3300025981 Bacteria 208390
100 Ga0207640_10000018 3300025981 Bacteria 193664
101 Ga0207674_10229987 3300026116 Bacteria 1802
102 Ga0209588_1001679 3300027671 Bacteria 5827
103 Ga0268266_10000599 3300028379 Bacteria 49276
104 Ga0268266_10510155 3300028379 Bacteria 1149
105 Ga0268265_10215567 3300028380 Bacteria 1676
106 Ga0265325_10000083 3300031241 Bacteria 66086
107 Ga0265331_10021096 3300031250 Bacteria 3337
108 Ga0265316_10070030 3300031344 Bacteria 2706
109 Ga0265313_10002089 3300031595 Bacteria 17846
110 Ga0265314_10001245 3300031711 Bacteria 29069
111 Ga0265314_10044717 3300031711 Bacteria 3136
112 Ga0265342_10128456 3300031712 Bacteria 1422
113 Ga0307412_10000083 3300031911 Bacteria 91374
114 Ga0307412_10000300 3300031911 Bacteria 31421
115 Ga0307510_10003786 3300033180 Bacteria 17694
116 Ga0395899_0000065 3300037312 Bacteria 205510
117 Ga0395900_0000170 3300037418 Bacteria 105817
118 Ga0395898_0001451 3300037466 Bacteria 33578
119 Ga0439436_0000001 3300041404 Bacteria 299341
120 Ga0439461_0038796 3300041410 Bacteria 1022
121 Ga0439466_0011064 3300041411 Bacteria 3344
122 Ga0439465_0015995 3300041413 Bacteria 2339
123 Ga0439431_0016887 3300041997 Bacteria 1712
124 Ga0439445_0034362 3300042004 Bacteria 1328
125 Ga0466969_0004268 3300044656 Bacteria 7602
126 Ga0466969_0007526 3300044656 Bacteria 5789
127 Ga0466978_0012672 3300044671 Bacteria 4725
128 Ga0466982_0000004 3300044672 Bacteria 386724
129 Ga0466965_0005582 3300044683 Bacteria 5677
130 Ga0466966_0002115 3300044684 Bacteria 12903
131 Ga0466966_0017020 3300044684 Bacteria 4806
132 Ga0466966_0066488 3300044684 Bacteria 2265
133 Ga0466961_0000188 3300044693 Bacteria 41215
134 Ga0466961_0000435 3300044693 Bacteria 26633
135 Ga0466961_0001874 3300044693 Bacteria 13062
136 Ga0466963_0191866 3300044694 Bacteria 1427
137 Ga0466971_0002681 3300044719 Bacteria 7520
138 Ga0466971_0004551 3300044719 Bacteria 5997
139 Ga0466970_0000271 3300044765 Bacteria 25244
140 Ga0466970_0003853 3300044765 Bacteria 7344
141 Ga0466970_0009986 3300044765 Bacteria 4807
142 Ga0466970_0016216 3300044765 Bacteria 3838
143 Ga0466970_0048823 3300044765 Bacteria 2257
144 Ga0466957_0016817 3300044842 Bacteria 4279
145 Ga0466959_0018311 3300045049 Bacteria 5142
146 Ga0466959_0064497 3300045049 Bacteria 2659
147 Ga0466967_0039520 3300045976 Bacteria 4057
148 Ga0495638_0000123 3300046460 Bacteria 125420
149 Ga0495653_0002250 3300046463 Bacteria 15264
150 Ga0495650_0074124 3300046471 Bacteria 1328
151 Ga0495585_0002428 3300046492 Bacteria 13343
152 Ga0495583_0000759 3300046506 Bacteria 40966
153 Ga0495583_0058888 3300046506 Bacteria 1723
154 Ga0495606_0003680 3300046507 Bacteria 16053
155 Ga0495610_0000951 3300046512 Bacteria 26825
156 Ga0495637_0022216 3300046520 Bacteria 2897
157 Ga0495648_0038043 3300046524 Bacteria 3083
158 Ga0495663_0028207 3300046525 Bacteria 1651
159 Ga0495611_0000477 3300046648 Bacteria 23932
160 Ga0495625_0180006 3300046660 Bacteria 1406
161 Ga0495670_0013679 3300046691 Bacteria 3991
162 Ga0495649_0101972 3300046694 Bacteria 1525
163 Ga0495676_0000078 3300047321 Bacteria 72357
164 Ga0495677_0024555 3300047445 Bacteria 2187
165 Ga0495626_0000048 3300048091 Bacteria 161634
166 Ga0496100_0465098 3300048903 Bacteria 971
167 Ga0496101_0374635 3300048904 Bacteria 1120
168 Ga0496110_0152354 3300048913 Bacteria 2094
169 Ga0496124_0334191 3300048927 Bacteria 1079
170 Ga0496126_0060185 3300048929 Bacteria 3417
171 Ga0496126_0392129 3300048929 Bacteria 1128
172 Ga0466983_0144892 3300048986 Bacteria 1947
173 Ga0495678_003456 3300049459 Bacteria 9788
174 Ga0495678_017415 3300049459 Bacteria 3257
175 Ga0501031_0010568 3300049568 Bacteria 6009
176 Ga0501033_0002170 3300049570 Bacteria 16951
177 Ga0501033_0027464 3300049570 Bacteria 4278
178 Ga0501033_0063637 3300049570 Bacteria 2715
179 Ga0501034_0012060 3300049571 Bacteria 8935
180 Ga0501036_0012590 3300049572 Bacteria 7014
181 Ga0501037_0005891 3300049573 Bacteria 8954
182 Ga0501037_0185484 3300049573 Bacteria 1474
183 Ga0501038_0008504 3300049574 Bacteria 9432
184 Ga0501038_0116733 3300049574 Bacteria 2205
185 Ga0501039_0010585 3300049575 Bacteria 7028
186 Ga0501042_0057677 3300049578 Bacteria 2771
187 Ga0501042_0225620 3300049578 Bacteria 1351
188 Ga0501043_0004728 3300049579 Bacteria 11042
189 Ga0501043_0178043 3300049579 Bacteria 1657
190 Ga0501046_0003612 3300049580 Bacteria 14167
191 Ga0501047_0050430 3300049581 Bacteria 4019
192 Ga0501047_0127873 3300049581 Bacteria 2421
193 Ga0501067_0020388 3300049583 Bacteria 3669
194 Ga0501068_0001689 3300049584 Bacteria 11774
195 Ga0501070_0003132 3300049586 Bacteria 14403
196 Ga0501074_0026805 3300049590 Bacteria 4178
197 Ga0501079_0028695 3300049741 Bacteria 4271
198 Ga0501035_0005480 3300049822 Bacteria 11991
199 Ga0501035_0023692 3300049822 Bacteria 5632
200 Ga0501044_0044620 3300049823 Bacteria 4599
201 Ga0501044_0139257 3300049823 Bacteria 2415
202 Ga0501045_0108338 3300049824 Bacteria 2059
203 nmdc:mga08x19_74610_c1 3300050514 Bacteria 2216
204 Ga0500643_002114 3300053087 Bacteria 10553
205 Ga0500641_0079357 3300053096 Bacteria 1391
206 Ga0500572_050515 3300053111 Bacteria 1238
207 Ga0500658_0000683 3300053134 Bacteria 13999
208 Ga0500568_0000514 3300053139 Bacteria 28491
209 Ga0500616_0002357 3300053153 Bacteria 15880
210 Ga0500616_0100014 3300053153 Bacteria 1419
211 Ga0500638_183166 3300053162 Bacteria 902
212 Ga0466962_0002899 3300061719 Bacteria 8175
213 2508542762 2508501009 Bacteria 7784016
214 2508691479 2508501042 Bacteria 8719808
215 2513639048 2513237094 Bacteria 8789602
216 2585330624 2582581316 Bacteria 7774528
217 2599735710 2599185239 Bacteria 8686614
218 2644062919 2643221609 Bacteria 6756331
219 2644070602 2643221611 Bacteria 6820941
220 2745075238 2744054633 Bacteria 8678936
221 2746090421 2744054900 Bacteria 8399525
222 2746095861 2744054901 Bacteria 8397047
223 2816472599 2816332133 Bacteria 7249298
224 2819630249 2818991452 Bacteria 8442785
225 2824714216 2824704595 Bacteria 9667483
226 2824763152 2824753945 Bacteria 9787441
227 2824772794 2824763712 Bacteria 9792355
228 2838033942 2838029111 Bacteria 6603031
229 2842480688 2842475841 Bacteria 6603183
230 2842507269 2842502639 Bacteria 6604161
231 2863423526 2863421361 Bacteria 7300805
232 2879103280 2879099564 Bacteria 10442239
233 2904714535 2904711408 Bacteria 9771557
234 2906611370
235 2922428005
236 2928173785 2928170801 Bacteria 8785406
237 2932810610 2932809354 Bacteria 9135765
238 2932821244 2932818245 Bacteria 9955613
239 2935649963 2935648319 Bacteria 8801166
240 2935661885 2935656913 Bacteria 8965014
241 2935762626 2935760218 Bacteria 9817913
242 2935773217 2935769743 Bacteria 7878163
243 2935790418 2935785616 Bacteria 7962367
244 2935798147 2935793552 Bacteria 8012592
245 2935988253 2935984226 Bacteria 8302647
246 2936012554 2936011229 Bacteria 8801034
247 2936021118 2936019824 Bacteria 8804134
248 2936029847 2936028420 Bacteria 8965941
249 2936047312 2936046547 Bacteria 8903709
250 2936057530 2936055302 Bacteria 8785755
251 2941532678 2941531003 Bacteria 7653939
252 3005423315 3005416602 Bacteria 7064308
253 3005714826 3005710791 Bacteria 7622528
254 8005315641 8005314921 Bacteria 7072929
255 8005484451 8005484373 Bacteria 6297373
256 8005647375 8005645114 Bacteria 6950293
257 8018853092 8018845410 Bacteria 8933938
258 8021121204 8021120328 Bacteria 8782274
259 8039102515 8039098773 Bacteria 6602928
260 Ga0068855_100008116
261 JGI25162J39368_1000323
262 JGI25164J39214_1000032
263 JGI25165J46597_1000136
264 rootH1_10070420
265 Ga0055532_1000405
266 Ga0055525_1000082
267 Ga0055527_1000087
268 Ga0055527_1000153
269 Ga0055527_1000722
270 Ga0055527_1009966
271 Ga0055535_1000316
272 Ga0055535_1000699
273 Ga0055535_1001551
274 Ga0055535_1001773
275 Ga0055542_1000203
276 Ga0055542_1000318
277 Ga0055542_1001706
278 Ga0055529_1001123
279 Ga0055529_1001693
280 Ga0055540_1007244
281 Ga0055531_10002019
282 Ga0065165_1004258
283 Ga0070658_10007044
284 Ga0070709_10070750
285 Ga0070711_100000471
286 Ga0070708_100363900
287 Ga0070706_100136612
288 Ga0070699_100105052
289 Ga0070699_100184423
290 Ga0070665_100606328
291 Ga0070704_100079921
292 Ga0068857_100096828
293 Ga0068854_100000144
294 Ga0068858_100433725
295 Ga0068862_100374378
296 Ga0105251_10000762
297 Ga0105250_10000041
298 Ga0105240_10002948
299 Ga0105240_10012363
300 Ga0114129_10390505
301 Ga0105243_10221002
302 Ga0105237_10000541
303 Ga0105239_10002977
304 Ga0182008_10001051
305 Ga0157379_10181160
306 Ga0157379_10305824
307 Ga0157376_10205352
308 Ga0182006_1000611
309 Ga0182005_1001472
310 Ga0209566_100223
311 Ga0209672_100004
312 Ga0209672_100012
313 Ga0209672_100093
314 Ga0209672_104973
315 Ga0209147_100007
316 Ga0209147_100074
317 Ga0209147_100134
318 Ga0209563_100097
319 Ga0207427_100081
320 Ga0209437_100168
321 Ga0209258_100003
322 Ga0209258_100014
323 Ga0209258_100209
324 Ga0209258_100412
325 Ga0209646_1001985
326 Ga0209148_1000016
327 Ga0209148_1000184
328 Ga0209148_1000287
329 Ga0209148_1000356
330 Ga0209148_1000390
331 Ga0209759_1006061
332 Ga0209233_1000151
333 Ga0209233_1002641
334 Ga0209565_1020106
335 Ga0209455_1000004
336 Ga0209455_1000160
337 Ga0209455_1000466
338 Ga0209455_1003404
339 Ga0209455_1009510
340 Ga0209673_1000046
341 Ga0209758_1000217
342 Ga0209051_1000059
343 Ga0209257_1000022
344 Ga0207696_1000011
345 Ga0207713_1000771
346 Ga0207699_10008443
347 Ga0207705_10039320
348 Ga0207695_10019042
349 Ga0207695_10029940
350 Ga0207695_10465846
351 Ga0207671_10000883
352 Ga0207693_10062054
353 Ga0207663_10002631
354 Ga0207646_10142106
355 Ga0207667_10000082
356 Ga0207640_10000014
357 Ga0207640_10000016
358 Ga0207640_10000018
359 Ga0207674_10229987
360 Ga0209588_1001679
361 Ga0268266_10000599
362 Ga0268266_10510155
363 Ga0268265_10215567
364 Ga0265325_10000083
365 Ga0265331_10021096
366 Ga0265316_10070030
367 Ga0265313_10002089
368 Ga0265314_10001245
369 Ga0265314_10044717
370 Ga0265342_10128456
371 Ga0307412_10000083
372 Ga0307412_10000300
373 Ga0307510_10003786
374 Ga0395899_0000065
375 Ga0395900_0000170
376 Ga0395898_0001451
377 Ga0439436_0000001
378 Ga0439461_0038796
379 Ga0439466_0011064
380 Ga0439465_0015995
381 Ga0439431_0016887
382 Ga0439445_0034362
383 Ga0466969_0004268
384 Ga0466969_0007526
385 Ga0466978_0012672
386 Ga0466982_0000004
387 Ga0466965_0005582
388 Ga0466966_0002115
389 Ga0466966_0017020
390 Ga0466966_0066488
391 Ga0466961_0000188
392 Ga0466961_0000435
393 Ga0466961_0001874
394 Ga0466963_0191866
395 Ga0466971_0002681
396 Ga0466971_0004551
397 Ga0466970_0000271
398 Ga0466970_0003853
399 Ga0466970_0009986
400 Ga0466970_0016216
401 Ga0466970_0048823
402 Ga0466957_0016817
403 Ga0466959_0018311
404 Ga0466959_0064497
405 Ga0466967_0039520
406 Ga0495638_0000123
407 Ga0495653_0002250
408 Ga0495650_0074124
409 Ga0495585_0002428
410 Ga0495583_0000759
411 Ga0495583_0058888
412 Ga0495606_0003680
413 Ga0495610_0000951
414 Ga0495637_0022216
415 Ga0495648_0038043
416 Ga0495663_0028207
417 Ga0495611_0000477
418 Ga0495625_0180006
419 Ga0495670_0013679
420 Ga0495649_0101972
421 Ga0495676_0000078
422 Ga0495677_0024555
423 Ga0495626_0000048
424 Ga0496100_0465098
425 Ga0496101_0374635
426 Ga0496110_0152354
427 Ga0496124_0334191
428 Ga0496126_0060185
429 Ga0496126_0392129
430 Ga0466983_0144892
431 Ga0495678_003456
432 Ga0495678_017415
433 Ga0501031_0010568
434 Ga0501033_0002170
435 Ga0501033_0027464
436 Ga0501033_0063637
437 Ga0501034_0012060
438 Ga0501036_0012590
439 Ga0501037_0005891
440 Ga0501037_0185484
441 Ga0501038_0008504
442 Ga0501038_0116733
443 Ga0501039_0010585
444 Ga0501042_0057677
445 Ga0501042_0225620
446 Ga0501043_0004728
447 Ga0501043_0178043
448 Ga0501046_0003612
449 Ga0501047_0050430
450 Ga0501047_0127873
451 Ga0501067_0020388
452 Ga0501068_0001689
453 Ga0501070_0003132
454 Ga0501074_0026805
455 Ga0501079_0028695
456 Ga0501035_0005480
457 Ga0501035_0023692
458 Ga0501044_0044620
459 Ga0501044_0139257
460 Ga0501045_0108338
461 nmdc:mga08x19_74610_c1
462 Ga0500643_002114
463 Ga0500641_0079357
464 Ga0500572_050515
465 Ga0500658_0000683
466 Ga0500568_0000514
467 Ga0500616_0002357
468 Ga0500616_0100014
469 Ga0500638_183166
470 Ga0466962_0002899
471 2508542762
472 2508691479
473 2513639048
474 2585330624
475 2599735710
476 2644062919
477 2644070602
478 2745075238
479 2746090421
480 2746095861
481 2816472599
482 2819630249
483 2824714216
484 2824763152
485 2824772794
486 2838033942
487 2842480688
488 2842507269
489 2863423526
490 2879103280
491 2904714535
492 2906611370
493 2922428005
494 2928173785
495 2932810610
496 2932821244
497 2935649963
498 2935661885
499 2935762626
500 2935773217
501 2935790418
502 2935798147
503 2935988253
504 2936012554
505 2936021118
506 2936029847
507 2936047312
508 2936057530
509 2941532678
510 3005423315
511 3005714826
512 8005315641
513 8005484451
514 8005647375
515 8018853092
516 8021121204
517 8039102515

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13560

HTH_31

Helix-turn-helix domain

10

88

0.99

PF17765

MLTR_LBD

MmyB-like transcription regulator ligand binding domain

109

273

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
1y7y-assembly1.cif.gz_B high-resolution crystal structure of the restriction-modification controller protein c.ahdi from aeromonas hydrophila 0.8931 9 83
3zkc-assembly1.cif.gz_B crystal structure of the master regulator for biofilm formation sinr in complex with dna. 0.8662 8 79
1utx-assembly1.cif.gz_B regulation of cytolysin expression by enterococcus faecalis: role of cylr2 0.8637 38 79
2xj3-assembly1.cif.gz_A high resolution structure of the t55c mutant of cylr2. 0.8557 37 79
1adr-assembly1.cif.gz_A determination of the nuclear magnetic resonance structure of the dna-binding domain of the p22 c2 repressor (1-76) in solution and comparison with the dna-binding domain of the 434 repressor 0.8531 8 87
ID Description Score Start End Superfamily
4ybaA00 Mainly Alpha;Orthogonal Bundle;434 Repressor (Amino-terminal Domain);lambda repressor-like DNA-binding domains 0.9122 37 77 1.10.260.40
1y7yB00 Mainly Alpha;Orthogonal Bundle;434 Repressor (Amino-terminal Domain);lambda repressor-like DNA-binding domains 0.8931 9 83 1.10.260.40
1y7yA00 Mainly Alpha;Orthogonal Bundle;434 Repressor (Amino-terminal Domain);lambda repressor-like DNA-binding domains 0.8893 9 83 1.10.260.40
3zkcB00 Mainly Alpha;Orthogonal Bundle;434 Repressor (Amino-terminal Domain);lambda repressor-like DNA-binding domains 0.8662 8 79 1.10.260.40
1adrA00 Mainly Alpha;Orthogonal Bundle;434 Repressor (Amino-terminal Domain);lambda repressor-like DNA-binding domains 0.8531 8 87 1.10.260.40
ID Description Score Start End GO Terms
AF-A0A840FQM9-F1-model_v4 MmyB-like transcription regulator ligand binding domain-containing protein 0.9739 118 277
AF-A0A436S449-F1-model_v4 Transcriptional regulator 0.958 134 277
AF-A0A436S449-F1-model_v4 Transcriptional regulator 0.9453 134 277
AF-A0A4Q6BEU8-F1-model_v4 MmyB-like transcription regulator ligand binding domain-containing protein 0.9378 123 275
AF-U3U4B1-F1-model_v4 MmyB-like transcription regulator ligand binding domain-containing protein 0.9378 113 259

Map