F367992

General Info

Members Datasets Scaffolds Average Seq Length
258 165 516 390

Family's Representative Sequence

Representative Sequence 3300006844|Ga0075428_100018200|Ga0075428_1000182006
Length 368
Sequence MIQILLICFLICVVEFRSAQLPPVDVVVVERERVLTAAKKYLSEKPITITAATSSRSAGGPHDYFSEGDYWWPDPEKPDGPYIQRDGLSNPGNFNEHRRYLMRLSVQVPAMVAAWKLTQDLRYAKHAAEHLRAWFIDRRTKMNPHLRYAQAIHGRVTGRGVGIIDTLHLVEVLKAIKQWFSDYLLWITTDKYGVDEREAKNNHGTCWVLQVAAFARVTGDERLISYCRDRFKTVLVPNQIAVDGSFPQELRRTKPYGYSLFNLEAMAAICQLLSTPEDNLWTFETPDGRGMRKAMEFMTPYIRSKSGWSYPADVMYYQHWPMRQSSLLFAGIAFSRAEYIELWKKLPADSNVEEVVRNFFVRQPVLWW

Samples

Sample ID Description Type Environment
1 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
4 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
6 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
11 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
12 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
15 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
16 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
17 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
18 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
19 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
20 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
21 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
22 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
23 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
24 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
25 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
26 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
27 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
28 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
29 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
30 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
31 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
32 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
33 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
34 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
35 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
36 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
37 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
38 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
39 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
40 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
41 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
42 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
43 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
44 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
45 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
46 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
47 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
48 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
50 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
51 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
52 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
53 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
54 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
55 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
56 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
57 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
58 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
59 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
60 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
61 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
62 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
83 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
84 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
85 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
86 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
87 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
88 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
89 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
90 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
91 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
92 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
93 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
94 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
95 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
96 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
97 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
98 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
99 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
100 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
101 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
102 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
103 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
104 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
105 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
106 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
107 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
108 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
109 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
110 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
111 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
112 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
113 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
114 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
115 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
116 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
117 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
118 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
119 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
120 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
121 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
122 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
123 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
124 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
125 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
126 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
127 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
128 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
129 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
130 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
131 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
132 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
133 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
134 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
135 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
136 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
137 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
138 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
139 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
140 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
141 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
142 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
143 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
144 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
145 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
146 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
147 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
148 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
149 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
150 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
151 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
152 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
153 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
154 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
155 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
156 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
157 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
158 3300053145 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 endosphere Metagenome Endosphere
159 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
160 2738541297 Duganella sp. GV083 Isolate Unclassified
161 2738541357 Duganella sp. GV053 Isolate Unclassified
162 2738543003 Duganella sp. GV066 Isolate Unclassified
163 2738543026 Duganella sp. GV089 Isolate Unclassified
164 2738543029 Duganella sp. GV039 Isolate Unclassified
165 2821131069 Duganella sp. 1224 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.67
Metatranscriptomes 0
Isolates 2.33

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.39
Nodule 0
Rhizoplane 1.16
Rhizosphere 94.96
Stem 0
Stem Tuber 0
Unclassified 6.98

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075428_100018200 3300006844 Bacteria 7763
2 JGI25406J46586_10018089 3300003203 Bacteria 2900
3 Ga0065704_10126670 3300005289 Unclassified 1686
4 Ga0065715_10027913 3300005293 Bacteria 2102
5 Ga0065707_10006226 3300005295 Bacteria 2861
6 Ga0070690_100052622 3300005330 Bacteria 2603
7 Ga0070670_100220986 3300005331 Unclassified 1648
8 Ga0068869_100047454 3300005334 Bacteria 3102
9 Ga0068869_100117842 3300005334 Bacteria 2027
10 Ga0070680_100000314 3300005336 Bacteria 32426
11 Ga0070660_100067231 3300005339 Bacteria 2792
12 Ga0070692_10037285 3300005345 Bacteria 2471
13 Ga0070668_100141822 3300005347 Bacteria 1937
14 Ga0070671_100012349 3300005355 Bacteria 6878
15 Ga0070673_100008509 3300005364 Bacteria 6825
16 Ga0070659_100017700 3300005366 Bacteria 5367
17 Ga0070709_10002594 3300005434 Bacteria 9760
18 Ga0070714_100045075 3300005435 Bacteria 3736
19 Ga0070705_100060602 3300005440 Bacteria 2245
20 Ga0070708_100002366 3300005445 Bacteria 14596
21 Ga0070681_10044244 3300005458 Bacteria 4456
22 Ga0070706_100000137 3300005467 Bacteria 91778
23 Ga0070706_100019425 3300005467 Bacteria 6267
24 Ga0070706_100023261 3300005467 Bacteria 5709
25 Ga0070706_100152847 3300005467 Bacteria 2155
26 Ga0070706_100182586 3300005467 Bacteria 1959
27 Ga0070706_100229713 3300005467 Bacteria 1732
28 Ga0070707_100128743 3300005468 Bacteria 2460
29 Ga0070707_100205237 3300005468 Bacteria 1921
30 Ga0070707_100206915 3300005468 Bacteria 1912
31 Ga0070698_100018182 3300005471 Bacteria 7401
32 Ga0070698_100068562 3300005471 Bacteria 3564
33 Ga0070698_100195245 3300005471 Bacteria 1961
34 Ga0070699_100003214 3300005518 Bacteria 14449
35 Ga0070679_100074188 3300005530 Bacteria 3393
36 Ga0070697_100000076 3300005536 Bacteria 79138
37 Ga0070697_100036809 3300005536 Bacteria 3953
38 Ga0070697_100037427 3300005536 Bacteria 3920
39 Ga0068853_100003200 3300005539 Bacteria 12510
40 Ga0068853_100007428 3300005539 Bacteria 8770
41 Ga0070693_100125555 3300005547 Unclassified 1597
42 Ga0070704_100055234 3300005549 Bacteria 2814
43 Ga0068855_100011438 3300005563 Bacteria 10722
44 Ga0068855_100042124 3300005563 Bacteria 5410
45 Ga0070664_100003180 3300005564 Bacteria 13270
46 Ga0070664_100003772 3300005564 Bacteria 12225
47 Ga0070664_100026504 3300005564 Bacteria 4808
48 Ga0068857_100131324 3300005577 Bacteria 2259
49 Ga0068854_100009757 3300005578 Bacteria 6207
50 Ga0068856_100093972 3300005614 Bacteria 2985
51 Ga0068852_100083129 3300005616 Bacteria 2847
52 Ga0068859_100463995 3300005617 Bacteria 1362
53 Ga0068864_100028893 3300005618 Bacteria 4692
54 Ga0068864_100210336 3300005618 Bacteria 1791
55 Ga0068861_100094208 3300005719 Bacteria 2369
56 Ga0068861_100106009 3300005719 Unclassified 2244
57 Ga0081455_10013994 3300005937 Bacteria 7886
58 Ga0081455_10068745 3300005937 Unclassified 2947
59 Ga0081539_10005797 3300005985 Bacteria 12291
60 Ga0075428_100139272 3300006844 Bacteria 2638
61 Ga0075431_100035519 3300006847 Bacteria 5132
62 Ga0075431_100151862 3300006847 Unclassified 2384
63 Ga0075434_100272301 3300006871 Unclassified 1712
64 Ga0075436_100000008 3300006914 Bacteria 279288
65 Ga0097620_100464040 3300006931 Bacteria 1362
66 Ga0075435_100008036 3300007076 Bacteria 7551
67 Ga0075435_100016103 3300007076 Bacteria 5633
68 Ga0075435_100033168 3300007076 Unclassified 4081
69 Ga0105240_10053142 3300009093 Bacteria 5088
70 Ga0105245_10288992 3300009098 Bacteria 1605
71 Ga0114129_10012140 3300009147 Bacteria 12265
72 Ga0114129_10017141 3300009147 Bacteria 10314
73 Ga0114129_10030643 3300009147 Bacteria 7610
74 Ga0114129_10050833 3300009147 Bacteria 5820
75 Ga0114129_10067493 3300009147 Bacteria 4988
76 Ga0114129_10088975 3300009147 Bacteria 4280
77 Ga0114129_10149409 3300009147 Bacteria 3198
78 Ga0105241_10042123 3300009174 Bacteria 3452
79 Ga0105237_10199169 3300009545 Unclassified 2002
80 Ga0105249_10000113 3300009553 Bacteria 108613
81 Ga0157373_10028153 3300013100 Unclassified 4054
82 Ga0157370_10005567 3300013104 Bacteria 14116
83 Ga0157369_10003478 3300013105 Bacteria 18686
84 Ga0157378_10042063 3300013297 Bacteria 4054
85 Ga0157378_10142268 3300013297 Bacteria 2228
86 Ga0163162_10000023 3300013306 Bacteria 193395
87 Ga0163162_10531774 3300013306 Bacteria 1305
88 Ga0157372_10007647 3300013307 Bacteria 11490
89 Ga0157375_10004349 3300013308 Bacteria 12300
90 Ga0157375_10350074 3300013308 Bacteria 1643
91 Ga0163163_10029643 3300014325 Bacteria 5266
92 Ga0163163_10032050 3300014325 Bacteria 5076
93 Ga0157380_10004615 3300014326 Bacteria 9568
94 Ga0213876_10000141 3300021384 Bacteria 78529
95 Ga0207688_10036263 3300025901 Bacteria 2734
96 Ga0207684_10015346 3300025910 Bacteria 6594
97 Ga0207684_10016349 3300025910 Bacteria 6372
98 Ga0207684_10139224 3300025910 Bacteria 2086
99 Ga0207707_10019038 3300025912 Bacteria 5990
100 Ga0207660_10005184 3300025917 Bacteria 8471
101 Ga0207660_10094946 3300025917 Bacteria 2217
102 Ga0207652_10037537 3300025921 Bacteria 4101
103 Ga0207652_10070018 3300025921 Bacteria 3046
104 Ga0207646_10005977 3300025922 Bacteria 12693
105 Ga0207646_10133263 3300025922 Bacteria 2237
106 Ga0207681_10029715 3300025923 Bacteria 3554
107 Ga0207650_10182465 3300025925 Unclassified 1673
108 Ga0207664_10036850 3300025929 Bacteria 3782
109 Ga0207706_10124798 3300025933 Bacteria 2265
110 Ga0207706_10155290 3300025933 Bacteria 2013
111 Ga0207689_10078835 3300025942 Bacteria 2707
112 Ga0207689_10165700 3300025942 Bacteria 1821
113 Ga0207679_10006310 3300025945 Bacteria 7487
114 Ga0207679_10047312 3300025945 Bacteria 3124
115 Ga0207667_10033572 3300025949 Bacteria 5516
116 Ga0207667_10047270 3300025949 Bacteria 4555
117 Ga0207651_10205240 3300025960 Bacteria 1582
118 Ga0207712_10000216 3300025961 Bacteria 57333
119 Ga0207668_10023370 3300025972 Bacteria 3972
120 Ga0207639_10006372 3300026041 Bacteria 8017
121 Ga0207708_10077418 3300026075 Bacteria 2552
122 Ga0207676_10203885 3300026095 Bacteria 1749
123 Ga0207674_10015491 3300026116 Bacteria 8374
124 Ga0207674_10039101 3300026116 Bacteria 4920
125 Ga0207674_10146762 3300026116 Bacteria 2317
126 Ga0207428_10017022 3300027907 Bacteria 6245
127 Ga0207428_10091383 3300027907 Bacteria 2363
128 Ga0395900_0017886 3300037418 Bacteria 7235
129 Ga0395898_0031905 3300037466 Bacteria 5260
130 Ga0395898_0104784 3300037466 Bacteria 2712
131 Ga0395901_0037498 3300038443 Bacteria 5013
132 Ga0436365_0289912 3300039437 Bacteria 336570
133 Ga0453683_0103402 3300044673 Unclassified 1789
134 Ga0451576_0076987 3300045051 Bacteria 3471
135 Ga0495627_004746 3300046453 Bacteria 5618
136 Ga0495590_0000013 3300046457 Bacteria 271977
137 Ga0495590_0000087 3300046457 Bacteria 60113
138 Ga0495590_0039426 3300046457 Bacteria 1648
139 Ga0495591_000109 3300046458 Bacteria 94877
140 Ga0495653_0000002 3300046463 Bacteria 507262
141 Ga0495653_0001899 3300046463 Bacteria 16472
142 Ga0495653_0031697 3300046463 Bacteria 4201
143 Ga0495580_0021841 3300046472 Bacteria 4720
144 Ga0495605_0009971 3300046474 Bacteria 5323
145 Ga0495584_0000052 3300046491 Bacteria 87015
146 Ga0495585_0021395 3300046492 Bacteria 3714
147 Ga0495594_0005391 3300046499 Bacteria 6574
148 Ga0495596_0000517 3300046500 Bacteria 24429
149 Ga0495596_0006484 3300046500 Bacteria 5373
150 Ga0495596_0018290 3300046500 Bacteria 2889
151 Ga0495596_0024510 3300046500 Bacteria 2441
152 Ga0495596_0034506 3300046500 Bacteria 2008
153 Ga0495607_0000479 3300046501 Bacteria 40004
154 Ga0495583_0000685 3300046506 Bacteria 43784
155 Ga0495583_0001888 3300046506 Bacteria 19427
156 Ga0495583_0050217 3300046506 Bacteria 1906
157 Ga0495606_0000030 3300046507 Bacteria 249484
158 Ga0495606_0003096 3300046507 Bacteria 18095
159 Ga0495606_0005109 3300046507 Bacteria 12755
160 Ga0495606_0012574 3300046507 Bacteria 6775
161 Ga0495606_0128843 3300046507 Bacteria 1506
162 Ga0495606_0143780 3300046507 Unclassified 1406
163 Ga0495610_0000313 3300046512 Bacteria 51404
164 Ga0495616_0002049 3300046513 Bacteria 13543
165 Ga0495616_0004800 3300046513 Bacteria 8466
166 Ga0495616_0013992 3300046513 Bacteria 4508
167 Ga0495630_0015766 3300046517 Bacteria 5522
168 Ga0495632_0000029 3300046519 Bacteria 171022
169 Ga0495632_0019202 3300046519 Bacteria 3730
170 Ga0495632_0032143 3300046519 Bacteria 2706
171 Ga0495637_0000008 3300046520 Bacteria 404658
172 Ga0495643_0031422 3300046522 Bacteria 2954
173 Ga0495643_0042076 3300046522 Bacteria 2489
174 Ga0495644_0006056 3300046523 Bacteria 4710
175 Ga0495648_0039189 3300046524 Bacteria 3018
176 Ga0495666_0036498 3300046526 Bacteria 2394
177 Ga0495642_0019481 3300046528 Unclassified 2660
178 Ga0495642_0034430 3300046528 Bacteria 2040
179 Ga0495654_0019081 3300046530 Bacteria 3587
180 Ga0495665_0007734 3300046531 Bacteria 5815
181 Ga0495587_0038279 3300046536 Bacteria 2876
182 Ga0495609_0043983 3300046538 Bacteria 2004
183 Ga0495597_0000777 3300046542 Bacteria 25271
184 Ga0495597_0066351 3300046542 Bacteria 1564
185 Ga0495645_0181319 3300046543 Bacteria 1443
186 Ga0495633_0002160 3300046558 Bacteria 14100
187 Ga0495633_0002754 3300046558 Bacteria 12159
188 Ga0495668_0016232 3300046616 Bacteria 4330
189 Ga0495668_0067304 3300046616 Bacteria 1970
190 Ga0495611_0000214 3300046648 Bacteria 40851
191 Ga0495611_0047080 3300046648 Bacteria 1934
192 Ga0495588_0012475 3300046674 Bacteria 4018
193 Ga0495588_0122173 3300046674 Unclassified 1373
194 Ga0495623_0009357 3300046679 Bacteria 6364
195 Ga0495623_0021542 3300046679 Bacteria 4162
196 Ga0495669_0021265 3300046684 Bacteria 2814
197 Ga0495670_0126287 3300046691 Bacteria 1331
198 Ga0495671_0000547 3300046692 Bacteria 28201
199 Ga0495671_0000779 3300046692 Bacteria 22900
200 Ga0495671_0040553 3300046692 Bacteria 2348
201 Ga0495649_0000205 3300046694 Bacteria 52102
202 Ga0495649_0005550 3300046694 Bacteria 7986
203 Ga0495649_0044007 3300046694 Bacteria 2437
204 Ga0495649_0087454 3300046694 Bacteria 1663
205 Ga0495589_0058094 3300046794 Unclassified 1902
206 Ga0495660_0038619 3300046810 Bacteria 2653
207 Ga0495581_0095849 3300047315 Bacteria 1723
208 Ga0495604_0009765 3300047317 Bacteria 7592
209 Ga0495636_0001596 3300047318 Bacteria 8615
210 Ga0495672_0000033 3300047320 Bacteria 291992
211 Ga0495672_0062150 3300047320 Bacteria 2149
212 Ga0495683_0000301 3300047323 Bacteria 41920
213 Ga0495687_000835 3300047443 Bacteria 32864
214 Ga0495675_0005893 3300047444 Bacteria 7487
215 Ga0495675_0040753 3300047444 Bacteria 2960
216 Ga0495677_0003467 3300047445 Bacteria 6120
217 Ga0495679_029756 3300047446 Bacteria 1779
218 Ga0495685_024000 3300047447 Bacteria 2099
219 Ga0495673_0000031 3300047469 Bacteria 447868
220 Ga0495681_0028405 3300047470 Bacteria 2878
221 Ga0495681_0032253 3300047470 Bacteria 2639
222 Ga0495681_0066071 3300047470 Bacteria 1651
223 Ga0495686_0031987 3300047472 Bacteria 3407
224 Ga0495602_0044460 3300048088 Bacteria 4028
225 Ga0495626_0016457 3300048091 Bacteria 3754
226 Ga0495626_0031131 3300048091 Bacteria 2569
227 Ga0496109_0000049 3300048912 Bacteria 127530
228 Ga0496112_0026499 3300048915 Bacteria 5578
229 Ga0496115_0004669 3300048918 Bacteria 9926
230 Ga0496126_0003146 3300048929 Bacteria 21272
231 Ga0495678_000024 3300049459 Bacteria 229034
232 Ga0495678_000641 3300049459 Bacteria 32197
233 Ga0495678_001131 3300049459 Bacteria 22164
234 Ga0495682_0000130 3300049460 Bacteria 65523
235 Ga0501076_0079159 3300049592 Bacteria 2638
236 nmdc:mga05p37_1061_c1 3300050507 Bacteria 31431
237 nmdc:mga05p37_22363_c1 3300050507 Bacteria 3695
238 nmdc:mga05p37_257293_c1 3300050507 Bacteria 2091
239 nmdc:mga05p37_35458_c1 3300050507 Bacteria 6116
240 nmdc:mga05p37_364062_c1 3300050507 Bacteria 1699
241 nmdc:mga09592_26806_c1 3300050508 Bacteria 4777
242 nmdc:mga06r32_252336_c1 3300050510 Bacteria 1752
243 nmdc:mga06r32_39271_c1 3300050510 Bacteria 4491
244 nmdc:mga08y16_7945_c1 3300050511 Bacteria 11102
245 nmdc:mga0rr50_1485_c1 3300050513 Bacteria 12870
246 nmdc:mga0rr50_162537_c1 3300050513 Bacteria 1813
247 nmdc:mga0rr50_50537_c1 3300050513 Unclassified 3081
248 nmdc:mga08x19_16_c1 3300050514 Bacteria 348119
249 nmdc:mga0a205_153372_c1 3300050515 Unclassified 2202
250 nmdc:mga0a205_29018_c1 3300050515 Bacteria 5293
251 Ga0500586_000401 3300053145 Bacteria 8667
252 Ga0501084_0312451 3300054114 Bacteria 1327
253 2738829830 2738541297 Bacteria 6549566
254 2739153626 2738541357 Bacteria 6549408
255 2739195546 2738543003 Bacteria 6549560
256 2739322022 2738543026 Bacteria 6549408
257 2739340263 2738543029 Bacteria 6549249
258 2821131786 2821131069 Bacteria 6108407
259 Ga0075428_100018200
260 JGI25406J46586_10018089
261 Ga0065704_10126670
262 Ga0065715_10027913
263 Ga0065707_10006226
264 Ga0070690_100052622
265 Ga0070670_100220986
266 Ga0068869_100047454
267 Ga0068869_100117842
268 Ga0070680_100000314
269 Ga0070660_100067231
270 Ga0070692_10037285
271 Ga0070668_100141822
272 Ga0070671_100012349
273 Ga0070673_100008509
274 Ga0070659_100017700
275 Ga0070709_10002594
276 Ga0070714_100045075
277 Ga0070705_100060602
278 Ga0070708_100002366
279 Ga0070681_10044244
280 Ga0070706_100000137
281 Ga0070706_100019425
282 Ga0070706_100023261
283 Ga0070706_100152847
284 Ga0070706_100182586
285 Ga0070706_100229713
286 Ga0070707_100128743
287 Ga0070707_100205237
288 Ga0070707_100206915
289 Ga0070698_100018182
290 Ga0070698_100068562
291 Ga0070698_100195245
292 Ga0070699_100003214
293 Ga0070679_100074188
294 Ga0070697_100000076
295 Ga0070697_100036809
296 Ga0070697_100037427
297 Ga0068853_100003200
298 Ga0068853_100007428
299 Ga0070693_100125555
300 Ga0070704_100055234
301 Ga0068855_100011438
302 Ga0068855_100042124
303 Ga0070664_100003180
304 Ga0070664_100003772
305 Ga0070664_100026504
306 Ga0068857_100131324
307 Ga0068854_100009757
308 Ga0068856_100093972
309 Ga0068852_100083129
310 Ga0068859_100463995
311 Ga0068864_100028893
312 Ga0068864_100210336
313 Ga0068861_100094208
314 Ga0068861_100106009
315 Ga0081455_10013994
316 Ga0081455_10068745
317 Ga0081539_10005797
318 Ga0075428_100139272
319 Ga0075431_100035519
320 Ga0075431_100151862
321 Ga0075434_100272301
322 Ga0075436_100000008
323 Ga0097620_100464040
324 Ga0075435_100008036
325 Ga0075435_100016103
326 Ga0075435_100033168
327 Ga0105240_10053142
328 Ga0105245_10288992
329 Ga0114129_10012140
330 Ga0114129_10017141
331 Ga0114129_10030643
332 Ga0114129_10050833
333 Ga0114129_10067493
334 Ga0114129_10088975
335 Ga0114129_10149409
336 Ga0105241_10042123
337 Ga0105237_10199169
338 Ga0105249_10000113
339 Ga0157373_10028153
340 Ga0157370_10005567
341 Ga0157369_10003478
342 Ga0157378_10042063
343 Ga0157378_10142268
344 Ga0163162_10000023
345 Ga0163162_10531774
346 Ga0157372_10007647
347 Ga0157375_10004349
348 Ga0157375_10350074
349 Ga0163163_10029643
350 Ga0163163_10032050
351 Ga0157380_10004615
352 Ga0213876_10000141
353 Ga0207688_10036263
354 Ga0207684_10015346
355 Ga0207684_10016349
356 Ga0207684_10139224
357 Ga0207707_10019038
358 Ga0207660_10005184
359 Ga0207660_10094946
360 Ga0207652_10037537
361 Ga0207652_10070018
362 Ga0207646_10005977
363 Ga0207646_10133263
364 Ga0207681_10029715
365 Ga0207650_10182465
366 Ga0207664_10036850
367 Ga0207706_10124798
368 Ga0207706_10155290
369 Ga0207689_10078835
370 Ga0207689_10165700
371 Ga0207679_10006310
372 Ga0207679_10047312
373 Ga0207667_10033572
374 Ga0207667_10047270
375 Ga0207651_10205240
376 Ga0207712_10000216
377 Ga0207668_10023370
378 Ga0207639_10006372
379 Ga0207708_10077418
380 Ga0207676_10203885
381 Ga0207674_10015491
382 Ga0207674_10039101
383 Ga0207674_10146762
384 Ga0207428_10017022
385 Ga0207428_10091383
386 Ga0395900_0017886
387 Ga0395898_0031905
388 Ga0395898_0104784
389 Ga0395901_0037498
390 Ga0436365_0289912
391 Ga0453683_0103402
392 Ga0451576_0076987
393 Ga0495627_004746
394 Ga0495590_0000013
395 Ga0495590_0000087
396 Ga0495590_0039426
397 Ga0495591_000109
398 Ga0495653_0000002
399 Ga0495653_0001899
400 Ga0495653_0031697
401 Ga0495580_0021841
402 Ga0495605_0009971
403 Ga0495584_0000052
404 Ga0495585_0021395
405 Ga0495594_0005391
406 Ga0495596_0000517
407 Ga0495596_0006484
408 Ga0495596_0018290
409 Ga0495596_0024510
410 Ga0495596_0034506
411 Ga0495607_0000479
412 Ga0495583_0000685
413 Ga0495583_0001888
414 Ga0495583_0050217
415 Ga0495606_0000030
416 Ga0495606_0003096
417 Ga0495606_0005109
418 Ga0495606_0012574
419 Ga0495606_0128843
420 Ga0495606_0143780
421 Ga0495610_0000313
422 Ga0495616_0002049
423 Ga0495616_0004800
424 Ga0495616_0013992
425 Ga0495630_0015766
426 Ga0495632_0000029
427 Ga0495632_0019202
428 Ga0495632_0032143
429 Ga0495637_0000008
430 Ga0495643_0031422
431 Ga0495643_0042076
432 Ga0495644_0006056
433 Ga0495648_0039189
434 Ga0495666_0036498
435 Ga0495642_0019481
436 Ga0495642_0034430
437 Ga0495654_0019081
438 Ga0495665_0007734
439 Ga0495587_0038279
440 Ga0495609_0043983
441 Ga0495597_0000777
442 Ga0495597_0066351
443 Ga0495645_0181319
444 Ga0495633_0002160
445 Ga0495633_0002754
446 Ga0495668_0016232
447 Ga0495668_0067304
448 Ga0495611_0000214
449 Ga0495611_0047080
450 Ga0495588_0012475
451 Ga0495588_0122173
452 Ga0495623_0009357
453 Ga0495623_0021542
454 Ga0495669_0021265
455 Ga0495670_0126287
456 Ga0495671_0000547
457 Ga0495671_0000779
458 Ga0495671_0040553
459 Ga0495649_0000205
460 Ga0495649_0005550
461 Ga0495649_0044007
462 Ga0495649_0087454
463 Ga0495589_0058094
464 Ga0495660_0038619
465 Ga0495581_0095849
466 Ga0495604_0009765
467 Ga0495636_0001596
468 Ga0495672_0000033
469 Ga0495672_0062150
470 Ga0495683_0000301
471 Ga0495687_000835
472 Ga0495675_0005893
473 Ga0495675_0040753
474 Ga0495677_0003467
475 Ga0495679_029756
476 Ga0495685_024000
477 Ga0495673_0000031
478 Ga0495681_0028405
479 Ga0495681_0032253
480 Ga0495681_0066071
481 Ga0495686_0031987
482 Ga0495602_0044460
483 Ga0495626_0016457
484 Ga0495626_0031131
485 Ga0496109_0000049
486 Ga0496112_0026499
487 Ga0496115_0004669
488 Ga0496126_0003146
489 Ga0495678_000024
490 Ga0495678_000641
491 Ga0495678_001131
492 Ga0495682_0000130
493 Ga0501076_0079159
494 nmdc:mga05p37_1061_c1
495 nmdc:mga05p37_22363_c1
496 nmdc:mga05p37_257293_c1
497 nmdc:mga05p37_35458_c1
498 nmdc:mga05p37_364062_c1
499 nmdc:mga09592_26806_c1
500 nmdc:mga06r32_252336_c1
501 nmdc:mga06r32_39271_c1
502 nmdc:mga08y16_7945_c1
503 nmdc:mga0rr50_1485_c1
504 nmdc:mga0rr50_162537_c1
505 nmdc:mga0rr50_50537_c1
506 nmdc:mga08x19_16_c1
507 nmdc:mga0a205_153372_c1
508 nmdc:mga0a205_29018_c1
509 Ga0500586_000401
510 Ga0501084_0312451
511 2738829830
512 2739153626
513 2739195546
514 2739322022
515 2739340263
516 2821131786

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05426

Alginate_lyase

Alginate lyase

48

308

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
3nnb-assembly1.cif.gz_A crystal structure of an alginate lyase (bacova_01668) from bacteroides ovatus at 1.60 a resolution 0.8667 29 379
8bdq-assembly1.cif.gz_A crystal structure of bacteroides ovatus cp926 pl38 alginate lyase 0.8379 19 386
3nnb-assembly1.cif.gz_A crystal structure of an alginate lyase (bacova_01668) from bacteroides ovatus at 1.60 a resolution 0.8019 29 379
8bdq-assembly1.cif.gz_A crystal structure of bacteroides ovatus cp926 pl38 alginate lyase 0.7985 19 386
7fi2-assembly1.cif.gz_A crystal structure of multi-functional polysaccharide lyase smlt1473-h168a from stenotrophomonas maltophilia (strain k279a) at ph-5.0 0.7533 45 384
ID Description Score Start End Superfamily
3nnbA01 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase;Chondroitin AC/alginate lyase 0.8463 29 379 1.50.10.100
3nnbA01 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase;Chondroitin AC/alginate lyase 0.7851 29 379 1.50.10.100
4ok4B01 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase;Chondroitin AC/alginate lyase 0.6693 84 384 1.50.10.100
4f13B00 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase;Chondroitin AC/alginate lyase 0.5963 28 387 1.50.10.100
af_Q9UL01_40_379_1.50.10.100 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase;Chondroitin AC/alginate lyase 0.5732 29 387 1.50.10.100
ID Description Score Start End GO Terms
AF-A0A1G0UUP1-F1-model_v4 Alginate lyase 0.987 103 387 GO:0016829
GO:0042597
AF-A0A2V7VJH4-F1-model_v4 Alginate lyase 0.9842 26 385 GO:0016829
GO:0042597
AF-A0A2V9YMS1-F1-model_v4 Alginate lyase 0.9829 35 386 GO:0016829
GO:0042597
AF-Q01XX4-F1-model_v4 Alginate lyase domain-containing protein 0.982 23 386 GO:0016829
GO:0042597
AF-A0A522ANZ4-F1-model_v4 Alginate lyase 0.9808 191 387 GO:0016829
GO:0042597

Map