F368064

General Info

Members Datasets Scaffolds Average Seq Length
258 151 516 387

Family's Representative Sequence

Representative Sequence 3300009177|Ga0105248_10458411|Ga0105248_104584111
Length 416
Sequence MPPRDEAGLRDALLMKLRPVLIVVVLLTGFYYLTTHFASVGAFAPWLSGHNASGPASNIESLRGPNGAFDLTVASAAPEYDSEEQKNIAVYKKALPSVVNITSTAVSWDFFYGAVPQQGQGSGFILNKEGLILTNNHVIENAQRVEVTLYDKHKYKAQVVTVDKGHDLALLRIDAPNLLPATLAETSTGLTVGQYVYAIGNPFGLSGTMTRGIISAIRPVRSPTGNLIDDAIQTDASVNPGNSGGPLLNSRGEVVGITTMIAGNPGVDQSAGIGFAIPINTAKAVLDDFAKYGRVRRPTLDAALLAIGPDEAQQIGLPADYGLLVERVFPGGAAEKAGLRGGTQRAYEGNTPVMLGGDLIIKFDGQEIANGPDLSQAMNSHRAGDTVTITIFRGRKKMDVKVTLGDAKDQPQGPQT

Samples

Sample ID Description Type Environment
1 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
9 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
10 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
11 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
14 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
18 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
19 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
20 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
21 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
22 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
23 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
24 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
25 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
26 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
27 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
28 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
29 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
30 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
31 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
32 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
33 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
34 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
35 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
36 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
37 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
38 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
39 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
40 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
41 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
42 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
43 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
69 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
70 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
71 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
72 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
73 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
74 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
75 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
76 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
77 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
78 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
79 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
80 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
81 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
82 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
83 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
84 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
85 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
86 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
87 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
88 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
89 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
90 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
91 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
92 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
93 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
94 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
95 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
96 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
97 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
98 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
99 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
100 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
101 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
102 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
103 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
104 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
105 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
106 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
107 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
108 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
109 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
110 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
111 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
112 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
113 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
114 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
115 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
116 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
117 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
118 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
119 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
120 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
121 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
122 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
123 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
124 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
125 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
126 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
127 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
128 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
129 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
130 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
131 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
132 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
133 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
134 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
135 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
139 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
143 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
144 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
145 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
146 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
147 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
148 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
149 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
150 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
151 2884215851 Edaphobacter sp. 12200R-103 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.61
Metatranscriptomes 0
Isolates 0.39

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.55
Nodule 0
Rhizoplane 2.71
Rhizosphere 91.47
Stem 0
Stem Tuber 0
Unclassified 3.88

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105248_10458411 3300009177 Bacteria 1437
2 rootH2_10045891 3300003320 Bacteria 5471
3 Ga0070658_10000043 3300005327 Bacteria 132337
4 Ga0070658_10002730 3300005327 Bacteria 14695
5 Ga0070658_10031055 3300005327 Bacteria 4289
6 Ga0070658_10065950 3300005327 Bacteria 2956
7 Ga0070658_10075907 3300005327 Bacteria 2757
8 Ga0070683_100043969 3300005329 Bacteria 4118
9 Ga0070666_10070871 3300005335 Bacteria 2372
10 Ga0070680_100022164 3300005336 Bacteria 5054
11 Ga0070660_100009326 3300005339 Bacteria 6896
12 Ga0070660_100039241 3300005339 Bacteria 3599
13 Ga0070660_100039317 3300005339 Bacteria 3595
14 Ga0070671_100003795 3300005355 Bacteria 11855
15 Ga0070659_100013735 3300005366 Bacteria 6038
16 Ga0070667_100083300 3300005367 Bacteria 2740
17 Ga0070709_10032278 3300005434 Bacteria 3156
18 Ga0070714_100024198 3300005435 Bacteria 4996
19 Ga0070714_100122729 3300005435 Bacteria 2312
20 Ga0070713_100389976 3300005436 Unclassified 1299
21 Ga0070663_100004547 3300005455 Bacteria 8175
22 Ga0070663_100049087 3300005455 Bacteria 2995
23 Ga0070663_100063780 3300005455 Bacteria 2662
24 Ga0070681_10158764 3300005458 Bacteria 2185
25 Ga0070681_10294636 3300005458 Bacteria 1532
26 Ga0070679_100113131 3300005530 Unclassified 2700
27 Ga0070684_100092420 3300005535 Bacteria 2692
28 Ga0068853_100000589 3300005539 Bacteria 24878
29 Ga0068853_100050207 3300005539 Unclassified 3588
30 Ga0068855_100007300 3300005563 Bacteria 13385
31 Ga0068855_100025263 3300005563 Bacteria 7110
32 Ga0068855_100029777 3300005563 Bacteria 6528
33 Ga0068855_100131388 3300005563 Bacteria 2859
34 Ga0068855_100208894 3300005563 Bacteria 2195
35 Ga0068855_100280352 3300005563 Bacteria 1851
36 Ga0068857_100014619 3300005577 Bacteria 6845
37 Ga0068857_100227677 3300005577 Unclassified 1704
38 Ga0068854_100000038 3300005578 Bacteria 95978
39 Ga0068854_100008383 3300005578 Bacteria 6643
40 Ga0068856_100112044 3300005614 Bacteria 2726
41 Ga0068856_100337739 3300005614 Bacteria 1524
42 Ga0068852_100033726 3300005616 Bacteria 4254
43 Ga0068852_100067106 3300005616 Bacteria 3136
44 Ga0068852_100070655 3300005616 Bacteria 3064
45 Ga0068863_100011324 3300005841 Bacteria 8636
46 Ga0068863_100022422 3300005841 Bacteria 6030
47 Ga0068858_100090588 3300005842 Bacteria 2846
48 Ga0075436_100006513 3300006914 Bacteria 8000
49 Ga0105240_10000001 3300009093 Bacteria 2887840
50 Ga0105240_10000498 3300009093 Bacteria 72329
51 Ga0105240_10012878 3300009093 Bacteria 11519
52 Ga0105240_10118673 3300009093 Bacteria 3188
53 Ga0105240_10405733 3300009093 Bacteria 1534
54 Ga0105243_10037709 3300009148 Bacteria 3759
55 Ga0105248_10017142 3300009177 Bacteria 7980
56 Ga0105237_10222272 3300009545 Bacteria 1889
57 Ga0157373_10038015 3300013100 Bacteria 3449
58 Ga0157371_10159574 3300013102 Bacteria 1610
59 Ga0157370_10010484 3300013104 Bacteria 9761
60 Ga0157370_10053989 3300013104 Bacteria 3830
61 Ga0157370_10079192 3300013104 Bacteria 3094
62 Ga0157370_10191306 3300013104 Bacteria 1899
63 Ga0157370_10193959 3300013104 Bacteria 1885
64 Ga0157370_10231194 3300013104 Bacteria 1711
65 Ga0157370_10246360 3300013104 Bacteria 1653
66 Ga0157369_10000535 3300013105 Bacteria 50270
67 Ga0157369_10013213 3300013105 Bacteria 9343
68 Ga0157369_10014334 3300013105 Bacteria 8951
69 Ga0157369_10026293 3300013105 Bacteria 6457
70 Ga0157369_10035295 3300013105 Bacteria 5484
71 Ga0157374_10002505 3300013296 Bacteria 15507
72 Ga0157374_10046266 3300013296 Bacteria 4029
73 Ga0157374_10171862 3300013296 Unclassified 2114
74 Ga0157374_10258963 3300013296 Bacteria 1713
75 Ga0163162_10005167 3300013306 Bacteria 12585
76 Ga0157372_10014598 3300013307 Bacteria 8403
77 Ga0157372_10023245 3300013307 Bacteria 6718
78 Ga0157372_10045849 3300013307 Bacteria 4851
79 Ga0157372_10083577 3300013307 Bacteria 3617
80 Ga0157372_10091194 3300013307 Bacteria 3466
81 Ga0157375_10287833 3300013308 Bacteria 1806
82 Ga0163163_10025774 3300014325 Bacteria 5608
83 Ga0157376_10113582 3300014969 Bacteria 2388
84 Ga0213874_10008438 3300021377 Bacteria 2511
85 Ga0213876_10098860 3300021384 Bacteria 1547
86 Ga0209233_1002973 3300025261 Bacteria 6040
87 Ga0207705_10000034 3300025909 Bacteria 216943
88 Ga0207705_10018528 3300025909 Bacteria 4978
89 Ga0207705_10020382 3300025909 Bacteria 4739
90 Ga0207705_10052714 3300025909 Unclassified 2929
91 Ga0207707_10213081 3300025912 Bacteria 1682
92 Ga0207695_10000001 3300025913 Bacteria 2888630
93 Ga0207695_10000106 3300025913 Bacteria 253001
94 Ga0207695_10042234 3300025913 Bacteria 4873
95 Ga0207671_10198256 3300025914 Bacteria 1567
96 Ga0207660_10021548 3300025917 Bacteria 4335
97 Ga0207660_10136464 3300025917 Bacteria 1872
98 Ga0207657_10002351 3300025919 Bacteria 20495
99 Ga0207657_10018479 3300025919 Bacteria 6653
100 Ga0207657_10051074 3300025919 Bacteria 3595
101 Ga0207649_10075377 3300025920 Unclassified 2168
102 Ga0207652_10080831 3300025921 Bacteria 2842
103 Ga0207652_10113087 3300025921 Bacteria 2409
104 Ga0207652_10150124 3300025921 Unclassified 2086
105 Ga0207694_10050228 3300025924 Bacteria 3229
106 Ga0207700_10021168 3300025928 Bacteria 4434
107 Ga0207664_10022918 3300025929 Bacteria 4671
108 Ga0207644_10022857 3300025931 Bacteria 4275
109 Ga0207711_10038982 3300025941 Bacteria 4040
110 Ga0207711_10068073 3300025941 Bacteria 3083
111 Ga0207661_10037881 3300025944 Bacteria 3775
112 Ga0207667_10000251 3300025949 Bacteria 75691
113 Ga0207667_10003667 3300025949 Bacteria 18932
114 Ga0207667_10012003 3300025949 Bacteria 10027
115 Ga0207667_10026360 3300025949 Bacteria 6352
116 Ga0207667_10064213 3300025949 Bacteria 3834
117 Ga0207667_10120317 3300025949 Bacteria 2706
118 Ga0207640_10000051 3300025981 Bacteria 95956
119 Ga0207658_10065194 3300025986 Bacteria 2735
120 Ga0207703_10080549 3300026035 Bacteria 2712
121 Ga0207639_10000069 3300026041 Bacteria 96786
122 Ga0207639_10070604 3300026041 Unclassified 2728
123 Ga0207678_10036595 3300026067 Bacteria 4273
124 Ga0207702_10142779 3300026078 Bacteria 2169
125 Ga0207702_10202790 3300026078 Bacteria 1840
126 Ga0207641_10022009 3300026088 Bacteria 5243
127 Ga0207641_10028425 3300026088 Bacteria 4621
128 Ga0207676_10047414 3300026095 Bacteria 3330
129 Ga0207676_10075182 3300026095 Bacteria 2724
130 Ga0207674_10013384 3300026116 Bacteria 9107
131 Ga0207674_10018340 3300026116 Bacteria 7609
132 Ga0268266_10012431 3300028379 Bacteria 7359
133 Ga0268266_10110089 3300028379 Bacteria 2439
134 Ga0265336_10000806 3300028666 Bacteria 16518
135 Ga0265338_10090701 3300028800 Bacteria 2529
136 Ga0265338_10163562 3300028800 Bacteria 1716
137 Ga0265330_10014410 3300031235 Bacteria 3669
138 Ga0265316_10004170 3300031344 Bacteria 14449
139 Ga0265316_10097969 3300031344 Bacteria 2231
140 Ga0265342_10004295 3300031712 Bacteria 11284
141 Ga0307510_10010774 3300033180 Bacteria 10874
142 Ga0307510_10016280 3300033180 Bacteria 8779
143 Ga0373947_0047810 3300035725 Bacteria 2565
144 Ga0373925_0037662 3300037068 Bacteria 3572
145 Ga0395898_0067312 3300037466 Bacteria 3468
146 Ga0395898_0204814 3300037466 Bacteria 1882
147 Ga0395905_0022347 3300037471 Bacteria 5984
148 Ga0395905_0035803 3300037471 Bacteria 4662
149 Ga0395905_0041313 3300037471 Bacteria 4328
150 Ga0395905_0146237 3300037471 Bacteria 2224
151 Ga0395901_0474277 3300038443 Bacteria 1277
152 Ga0436365_1404090 3300039437 Bacteria 2310
153 Ga0436363_0305072 3300039450 Bacteria 3553
154 Ga0436363_0914441 3300039450 Bacteria 2455
155 Ga0436362_1034594 3300039453 Bacteria 1746
156 Ga0466966_0093376 3300044684 Bacteria 1866
157 Ga0466963_0001898 3300044694 Bacteria 11422
158 Ga0466958_0100173 3300045836 Bacteria 1801
159 Ga0466967_0001281 3300045976 Bacteria 14293
160 Ga0466967_0041872 3300045976 Bacteria 3953
161 Ga0466967_0118754 3300045976 Bacteria 2440
162 Ga0466967_0158964 3300045976 Unclassified 2119
163 Ga0495603_0000937 3300046455 Bacteria 16784
164 Ga0495629_0002846 3300046459 Bacteria 13224
165 Ga0495629_0021663 3300046459 Bacteria 4586
166 Ga0495651_0025540 3300046462 Bacteria 4599
167 Ga0495651_0065657 3300046462 Bacteria 2771
168 Ga0495653_0048948 3300046463 Bacteria 3259
169 Ga0495650_0000037 3300046471 Bacteria 390090
170 Ga0495650_0003867 3300046471 Bacteria 10613
171 Ga0495580_0016489 3300046472 Bacteria 5542
172 Ga0495580_0127638 3300046472 Bacteria 1765
173 Ga0495662_0019687 3300046476 Bacteria 3265
174 Ga0495664_0120520 3300046477 Bacteria 1587
175 Ga0495585_0005419 3300046492 Bacteria 8048
176 Ga0495594_0000566 3300046499 Bacteria 18993
177 Ga0495594_0000757 3300046499 Bacteria 16578
178 Ga0495594_0000857 3300046499 Bacteria 15656
179 Ga0495596_0066811 3300046500 Bacteria 1398
180 Ga0495583_0025653 3300046506 Bacteria 2941
181 Ga0495628_0050526 3300046516 Bacteria 3288
182 Ga0495644_0000004 3300046523 Bacteria 158166
183 Ga0495666_0000584 3300046526 Bacteria 16345
184 Ga0495652_0021370 3300046529 Bacteria 5755
185 Ga0495652_0030804 3300046529 Bacteria 4701
186 Ga0495665_0036577 3300046531 Bacteria 2620
187 Ga0495586_0002255 3300046535 Bacteria 10494
188 Ga0495609_0007829 3300046538 Bacteria 5288
189 Ga0495609_0009279 3300046538 Bacteria 4767
190 Ga0495645_0006305 3300046543 Bacteria 8226
191 Ga0495645_0012202 3300046543 Bacteria 6050
192 Ga0495645_0081617 3300046543 Bacteria 2320
193 Ga0495622_0020588 3300046557 Bacteria 3072
194 Ga0495668_0029866 3300046616 Bacteria 3080
195 Ga0495668_0228259 3300046616 Bacteria 1019
196 Ga0495634_0009647 3300046642 Bacteria 7110
197 Ga0495611_0077609 3300046648 Bacteria 1523
198 Ga0495625_0004435 3300046660 Bacteria 13281
199 Ga0495625_0005078 3300046660 Bacteria 12177
200 Ga0495625_0025465 3300046660 Bacteria 4488
201 Ga0495625_0040486 3300046660 Bacteria 3398
202 Ga0495625_0077459 3300046660 Bacteria 2323
203 Ga0495635_0001540 3300046663 Bacteria 15440
204 Ga0495659_0007138 3300046664 Bacteria 3537
205 Ga0495661_0010398 3300046665 Bacteria 6350
206 Ga0495588_0016877 3300046674 Bacteria 3535
207 Ga0495599_0089296 3300046678 Bacteria 1923
208 Ga0495623_0013814 3300046679 Bacteria 5234
209 Ga0495669_0002892 3300046684 Bacteria 7053
210 Ga0495613_0005996 3300046689 Bacteria 9096
211 Ga0495600_0022161 3300046809 Bacteria 4076
212 Ga0495600_0026646 3300046809 Bacteria 3732
213 Ga0495604_0009183 3300047317 Bacteria 7826
214 Ga0495604_0037541 3300047317 Bacteria 3814
215 Ga0495636_0064433 3300047318 Bacteria 1555
216 Ga0495672_0006175 3300047320 Bacteria 9343
217 Ga0495676_0041749 3300047321 Bacteria 3772
218 Ga0495675_0015819 3300047444 Bacteria 4772
219 Ga0495673_0096404 3300047469 Bacteria 1202
220 Ga0495684_0014743 3300047471 Bacteria 6019
221 Ga0495686_0000027 3300047472 Bacteria 382657
222 Ga0495686_0000382 3300047472 Bacteria 70847
223 Ga0495686_0003350 3300047472 Bacteria 13972
224 Ga0495686_0006962 3300047472 Bacteria 8544
225 Ga0495686_0014675 3300047472 Bacteria 5387
226 Ga0495614_0037154 3300048089 Bacteria 2089
227 Ga0496104_0000127 3300048907 Bacteria 70210
228 Ga0496104_0082854 3300048907 Bacteria 3059
229 Ga0496104_0426460 3300048907 Bacteria 1238
230 Ga0496112_0036100 3300048915 Bacteria 4820
231 Ga0496114_0128093 3300048917 Bacteria 2190
232 Ga0496115_0111946 3300048918 Bacteria 2243
233 Ga0496115_0128841 3300048918 Bacteria 2085
234 Ga0496126_0000005 3300048929 Bacteria 891906
235 Ga0496126_0000024 3300048929 Bacteria 462877
236 Ga0496126_0003782 3300048929 Bacteria 18781
237 Ga0495682_0026217 3300049460 Bacteria 2166
238 Ga0501032_0002119 3300049569 Bacteria 15644
239 Ga0501036_0001980 3300049572 Bacteria 15885
240 Ga0501037_0051802 3300049573 Bacteria 3002
241 Ga0501038_0008810 3300049574 Bacteria 9256
242 Ga0501043_0000430 3300049579 Bacteria 37723
243 Ga0501046_0000371 3300049580 Bacteria 45434
244 Ga0501047_0006342 3300049581 Bacteria 11122
245 Ga0501047_0156695 3300049581 Bacteria 2151
246 Ga0501070_0219221 3300049586 Bacteria 1561
247 Ga0501073_0008963 3300049589 Bacteria 7390
248 Ga0501073_0071800 3300049589 Bacteria 2411
249 Ga0501074_0084550 3300049590 Bacteria 2274
250 Ga0501074_0091310 3300049590 Bacteria 2181
251 Ga0501080_0262892 3300049742 Bacteria 1572
252 Ga0501035_0002370 3300049822 Bacteria 18512
253 Ga0501044_0373694 3300049823 Bacteria 1342
254 nmdc:mga08x19_10910_c1 3300050514 Bacteria 5465
255 Ga0500651_0000039 3300053093 Bacteria 96498
256 Ga0500595_000423 3300053119 Bacteria 26615
257 Ga0500595_025612 3300053119 Bacteria 2042
258 2884218916 2884215851 Bacteria 4554841
259 Ga0105248_10458411
260 rootH2_10045891
261 Ga0070658_10000043
262 Ga0070658_10002730
263 Ga0070658_10031055
264 Ga0070658_10065950
265 Ga0070658_10075907
266 Ga0070683_100043969
267 Ga0070666_10070871
268 Ga0070680_100022164
269 Ga0070660_100009326
270 Ga0070660_100039241
271 Ga0070660_100039317
272 Ga0070671_100003795
273 Ga0070659_100013735
274 Ga0070667_100083300
275 Ga0070709_10032278
276 Ga0070714_100024198
277 Ga0070714_100122729
278 Ga0070713_100389976
279 Ga0070663_100004547
280 Ga0070663_100049087
281 Ga0070663_100063780
282 Ga0070681_10158764
283 Ga0070681_10294636
284 Ga0070679_100113131
285 Ga0070684_100092420
286 Ga0068853_100000589
287 Ga0068853_100050207
288 Ga0068855_100007300
289 Ga0068855_100025263
290 Ga0068855_100029777
291 Ga0068855_100131388
292 Ga0068855_100208894
293 Ga0068855_100280352
294 Ga0068857_100014619
295 Ga0068857_100227677
296 Ga0068854_100000038
297 Ga0068854_100008383
298 Ga0068856_100112044
299 Ga0068856_100337739
300 Ga0068852_100033726
301 Ga0068852_100067106
302 Ga0068852_100070655
303 Ga0068863_100011324
304 Ga0068863_100022422
305 Ga0068858_100090588
306 Ga0075436_100006513
307 Ga0105240_10000001
308 Ga0105240_10000498
309 Ga0105240_10012878
310 Ga0105240_10118673
311 Ga0105240_10405733
312 Ga0105243_10037709
313 Ga0105248_10017142
314 Ga0105237_10222272
315 Ga0157373_10038015
316 Ga0157371_10159574
317 Ga0157370_10010484
318 Ga0157370_10053989
319 Ga0157370_10079192
320 Ga0157370_10191306
321 Ga0157370_10193959
322 Ga0157370_10231194
323 Ga0157370_10246360
324 Ga0157369_10000535
325 Ga0157369_10013213
326 Ga0157369_10014334
327 Ga0157369_10026293
328 Ga0157369_10035295
329 Ga0157374_10002505
330 Ga0157374_10046266
331 Ga0157374_10171862
332 Ga0157374_10258963
333 Ga0163162_10005167
334 Ga0157372_10014598
335 Ga0157372_10023245
336 Ga0157372_10045849
337 Ga0157372_10083577
338 Ga0157372_10091194
339 Ga0157375_10287833
340 Ga0163163_10025774
341 Ga0157376_10113582
342 Ga0213874_10008438
343 Ga0213876_10098860
344 Ga0209233_1002973
345 Ga0207705_10000034
346 Ga0207705_10018528
347 Ga0207705_10020382
348 Ga0207705_10052714
349 Ga0207707_10213081
350 Ga0207695_10000001
351 Ga0207695_10000106
352 Ga0207695_10042234
353 Ga0207671_10198256
354 Ga0207660_10021548
355 Ga0207660_10136464
356 Ga0207657_10002351
357 Ga0207657_10018479
358 Ga0207657_10051074
359 Ga0207649_10075377
360 Ga0207652_10080831
361 Ga0207652_10113087
362 Ga0207652_10150124
363 Ga0207694_10050228
364 Ga0207700_10021168
365 Ga0207664_10022918
366 Ga0207644_10022857
367 Ga0207711_10038982
368 Ga0207711_10068073
369 Ga0207661_10037881
370 Ga0207667_10000251
371 Ga0207667_10003667
372 Ga0207667_10012003
373 Ga0207667_10026360
374 Ga0207667_10064213
375 Ga0207667_10120317
376 Ga0207640_10000051
377 Ga0207658_10065194
378 Ga0207703_10080549
379 Ga0207639_10000069
380 Ga0207639_10070604
381 Ga0207678_10036595
382 Ga0207702_10142779
383 Ga0207702_10202790
384 Ga0207641_10022009
385 Ga0207641_10028425
386 Ga0207676_10047414
387 Ga0207676_10075182
388 Ga0207674_10013384
389 Ga0207674_10018340
390 Ga0268266_10012431
391 Ga0268266_10110089
392 Ga0265336_10000806
393 Ga0265338_10090701
394 Ga0265338_10163562
395 Ga0265330_10014410
396 Ga0265316_10004170
397 Ga0265316_10097969
398 Ga0265342_10004295
399 Ga0307510_10010774
400 Ga0307510_10016280
401 Ga0373947_0047810
402 Ga0373925_0037662
403 Ga0395898_0067312
404 Ga0395898_0204814
405 Ga0395905_0022347
406 Ga0395905_0035803
407 Ga0395905_0041313
408 Ga0395905_0146237
409 Ga0395901_0474277
410 Ga0436365_1404090
411 Ga0436363_0305072
412 Ga0436363_0914441
413 Ga0436362_1034594
414 Ga0466966_0093376
415 Ga0466963_0001898
416 Ga0466958_0100173
417 Ga0466967_0001281
418 Ga0466967_0041872
419 Ga0466967_0118754
420 Ga0466967_0158964
421 Ga0495603_0000937
422 Ga0495629_0002846
423 Ga0495629_0021663
424 Ga0495651_0025540
425 Ga0495651_0065657
426 Ga0495653_0048948
427 Ga0495650_0000037
428 Ga0495650_0003867
429 Ga0495580_0016489
430 Ga0495580_0127638
431 Ga0495662_0019687
432 Ga0495664_0120520
433 Ga0495585_0005419
434 Ga0495594_0000566
435 Ga0495594_0000757
436 Ga0495594_0000857
437 Ga0495596_0066811
438 Ga0495583_0025653
439 Ga0495628_0050526
440 Ga0495644_0000004
441 Ga0495666_0000584
442 Ga0495652_0021370
443 Ga0495652_0030804
444 Ga0495665_0036577
445 Ga0495586_0002255
446 Ga0495609_0007829
447 Ga0495609_0009279
448 Ga0495645_0006305
449 Ga0495645_0012202
450 Ga0495645_0081617
451 Ga0495622_0020588
452 Ga0495668_0029866
453 Ga0495668_0228259
454 Ga0495634_0009647
455 Ga0495611_0077609
456 Ga0495625_0004435
457 Ga0495625_0005078
458 Ga0495625_0025465
459 Ga0495625_0040486
460 Ga0495625_0077459
461 Ga0495635_0001540
462 Ga0495659_0007138
463 Ga0495661_0010398
464 Ga0495588_0016877
465 Ga0495599_0089296
466 Ga0495623_0013814
467 Ga0495669_0002892
468 Ga0495613_0005996
469 Ga0495600_0022161
470 Ga0495600_0026646
471 Ga0495604_0009183
472 Ga0495604_0037541
473 Ga0495636_0064433
474 Ga0495672_0006175
475 Ga0495676_0041749
476 Ga0495675_0015819
477 Ga0495673_0096404
478 Ga0495684_0014743
479 Ga0495686_0000027
480 Ga0495686_0000382
481 Ga0495686_0003350
482 Ga0495686_0006962
483 Ga0495686_0014675
484 Ga0495614_0037154
485 Ga0496104_0000127
486 Ga0496104_0082854
487 Ga0496104_0426460
488 Ga0496112_0036100
489 Ga0496114_0128093
490 Ga0496115_0111946
491 Ga0496115_0128841
492 Ga0496126_0000005
493 Ga0496126_0000024
494 Ga0496126_0003782
495 Ga0495682_0026217
496 Ga0501032_0002119
497 Ga0501036_0001980
498 Ga0501037_0051802
499 Ga0501038_0008810
500 Ga0501043_0000430
501 Ga0501046_0000371
502 Ga0501047_0006342
503 Ga0501047_0156695
504 Ga0501070_0219221
505 Ga0501073_0008963
506 Ga0501073_0071800
507 Ga0501074_0084550
508 Ga0501074_0091310
509 Ga0501080_0262892
510 Ga0501035_0002370
511 Ga0501044_0373694
512 nmdc:mga08x19_10910_c1
513 Ga0500651_0000039
514 Ga0500595_000423
515 Ga0500595_025612
516 2884218916

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13365

Trypsin_2

Trypsin-like peptidase domain

121

257

0.95

PF13180

PDZ_2

PDZ domain

305

404

0.93

PF00089

Trypsin

Trypsin

100

286

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
4fgm-assembly1.cif.gz_A crystal structure of the aminopeptidase n family protein q5qty1 from idiomarina loihiensis. northeast structural genomics consortium target ilr60. 0.9188 283 393
2zpl-assembly4.cif.gz_C crystal structure analysis of pdz domain a 0.9159 311 390
3i18-assembly1.cif.gz_A crystal structure of the pdz domain of the sdrc-like protein (lmo2051) from listeria monocytogenes, northeast structural genomics consortium target lmr166b 0.913 309 392
3sti-assembly1.cif.gz_B crystal structure of the protease domain of degq from escherichia coli 0.9063 73 280
6z0e-assembly2.cif.gz_B htra1 inactive protease domain s328a with carasil mutation r274q 0.9019 68 275
ID Description Score Start End Superfamily
5t69A01 Mainly Beta;Beta Barrel;Thrombin, subunit H; 0.9164 71 277 2.40.10.120
1y8tB01 Mainly Beta;Beta Barrel;Thrombin, subunit H;Trypsin-like serine proteases 0.9151 72 166 2.40.10.10
3gdvC03 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.9147 284 394 2.30.42.10
3mh4B01 Mainly Beta;Beta Barrel;Thrombin, subunit H;Trypsin-like serine proteases 0.9096 81 169 2.40.10.10
af_O53340_130_222_2.30.42.10 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.9089 309 395 2.30.42.10
ID Description Score Start End GO Terms
AF-A0A2P6W8M2-F1-model_v4 Trypsin 0.9454 68 201 GO:0004252
GO:0006508
AF-A0A7C5VRP8-F1-model_v4 Serine protease 0.9394 68 178 GO:0004252
GO:0006508
AF-X1KCS8-F1-model_v4 Serine protease 0.9151 73 196 GO:0004252
GO:0006508
AF-A0A536Z9N9-F1-model_v4 Serine protease 0.9053 108 242 GO:0006508
GO:0008233
AF-A0A3S4GP79-F1-model_v4 Serine endoprotease (EC 3.4.21.-, EC 3.4.21.107) 0.9008 81 201 GO:0004252
GO:0006515
GO:0042597

Map