F368355

General Info

Members Datasets Scaffolds Average Seq Length
258 189 516 205

Family's Representative Sequence

Representative Sequence 3300047443|Ga0495687_002995|Ga0495687_002995_4942_5655
Length 237
Sequence MKQHCFDISSFQPARPNDYPTIPCMNASMSTATFVTGLMLSLSLIVAIGAQNTFVLRQGLRREHVAAVVALCVLLDIALMTLGVSGLAASLGRHPRALDALALAGALLLAAYGTAALYRAWRPQALRTASSDTAQPLARVLTQALAISLLNPHVYLDTVVLIGAVGARQPPGTQGVFLVGAGLASAAWFTALGYGARALAPLFARPAAWRVLDVVIAATMWSLAIGLVTGVLSPTAT

Samples

Sample ID Description Type Environment
1 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
2 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
3 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
4 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
5 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
6 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
7 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
8 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
9 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
10 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
11 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
12 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
13 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
14 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
17 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
20 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
21 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
22 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
23 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
24 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
25 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
26 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
27 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
28 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
29 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
30 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
31 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
32 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
33 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
34 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
35 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
36 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
37 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
38 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
39 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
40 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
41 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
42 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
43 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
44 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
45 3300012502 Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.yng.040610 Metagenome Rhizosphere
46 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
47 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
48 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
49 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
50 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
51 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
52 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
53 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
54 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
76 3300027395 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 PM (SPAdes) (version 2) Metagenome Rhizosphere
77 3300027471 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 AM (SPAdes) (version 2) Metagenome Rhizosphere
78 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
79 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
80 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
81 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
83 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
84 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
85 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
86 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
87 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
88 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
89 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
90 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
91 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
92 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
93 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
94 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
95 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
96 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
97 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
98 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
99 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
100 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
101 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
102 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
103 3300042000 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z081617_5539 Metagenome Rhizosphere
104 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
105 3300042013 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z071817_5339 Metagenome Rhizosphere
106 3300042115 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_080116_2642 Metagenome Rhizosphere
107 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
108 3300042139 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0727L_E14_072516_1442 Metagenome Rhizosphere
109 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
110 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
111 3300042438 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 Metagenome Rhizosphere
112 3300042530 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0530L_E14_082316_2047 Metagenome Rhizosphere
113 3300042532 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126L_E14_070516_92 Metagenome Rhizosphere
114 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
115 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
116 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
117 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
118 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
119 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
120 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
121 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
122 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
123 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
124 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
125 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
126 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
127 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
128 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
129 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
130 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
131 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
132 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
133 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
134 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
135 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
136 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
137 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
138 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
139 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
140 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
141 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
142 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
143 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
144 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
145 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
148 3300049853 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought Metagenome Rhizosphere
149 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
150 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
151 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
152 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
153 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
154 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
155 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
156 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
157 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
158 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
159 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
160 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
161 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
162 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
163 2523533628 Maridesulfovibrio zosterae DSM 11974 Isolate Rhizosphere
164 2599185236 Rhizobium sp. NFR07 Isolate Rhizoplane
165 2600254933 Rhizobium sp. NFR12 Isolate Rhizoplane
166 2643221603 Noviherbaspirillum sp. Root189 Isolate Unclassified
167 2643221622 Sphingomonas sp. Root241 Isolate Unclassified
168 2651869719 Genome Sequence of Pseudomonas fluorescens UM270 Isolate Rhizosphere
169 2687453129 Halotalea alkalilenta IHB B 13600 Isolate Unclassified
170 2728369097 Stutzerimonas balearica st101 Isolate Unclassified
171 2740891818 Desulfofaba hansenii DSM 12642 Isolate Unclassified
172 2791355253 Rhizobium rhizosphaerae RD15 Isolate Rhizosphere
173 2808606373 Pseudomonas sp. SLBN-2 Isolate Unclassified
174 2818991461 Neorhizobium alkalisoli 1225 Isolate Unclassified
175 2818991462 Terrabacter sp. 3264 Isolate Rhizosphere
176 2818991469 Terrabacter lapilli 3265 Isolate Rhizosphere
177 2854896431 Neorhizobium alkalisoli DSM 21826 Isolate Unclassified
178 2854916844 Neorhizobium huautlense DSM 21817 Isolate Unclassified
179 2904449895 Variovorax sp. 1763 Isolate Rhizosphere
180 2904456579 Variovorax sp. 2002 Isolate Unclassified
181 2904765812 Rhodococcus fascians 1590 Isolate Rhizosphere
182 2904770941 Rhodococcus fascians 1339 Isolate Rhizosphere
183 2908811453 Rhodococcus sp. 1R11 Isolate Unclassified
184 2919420072 Rhodococcus fascians 3241 Isolate Rhizosphere
185 2919432681 Rhodococcus sp. 3258 Isolate Rhizosphere
186 2929520902 Variovorax beijingensis 502 Isolate Unclassified
187 2954767861 Variovorax sp. TBS-050B Isolate Rhizosphere
188 640427133 Stutzerimonas stutzeri A1501 Isolate Rhizosphere
189 651053060 Stutzerimonas stutzeri CMT.A.9 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 88.76
Metatranscriptomes 0.78
Isolates 10.47

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 22.48
Nodule 1.55
Rhizoplane 2.33
Rhizosphere 63.95
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495687_002995 3300047443 Bacteria 12765
2 JGI25153J46596_10003893 3300003215 Bacteria 8203
3 Ga0006562J51391_1077671 3300003578 Bacteria 10770
4 Ga0006562J51391_1077673 3300003578 Bacteria 6100
5 Ga0055530_10004592 3300003791 Bacteria 7042
6 Ga0055540_1001733 3300003792 Bacteria 12525
7 Ga0065714_10144353 3300005288 Bacteria 1149
8 Ga0070658_10152500 3300005327 Bacteria 1935
9 Ga0070676_10463317 3300005328 Bacteria 893
10 Ga0070683_100719953 3300005329 Bacteria 956
11 Ga0070680_100241178 3300005336 Bacteria 1528
12 Ga0070680_100372711 3300005336 Bacteria 1215
13 Ga0070674_100392360 3300005356 Bacteria 1132
14 Ga0070667_100153399 3300005367 Bacteria 2025
15 Ga0070663_100078436 3300005455 Bacteria 2421
16 Ga0070662_100205951 3300005457 Bacteria 1563
17 Ga0070681_10136871 3300005458 Bacteria 2380
18 Ga0070681_10182029 3300005458 Bacteria 2023
19 Ga0070681_10226521 3300005458 Bacteria 1784
20 Ga0068867_100034598 3300005459 Bacteria 3662
21 Ga0070706_100101732 3300005467 Bacteria 2670
22 Ga0070679_100028124 3300005530 Bacteria 5540
23 Ga0070679_100070713 3300005530 Bacteria 3481
24 Ga0068853_100220823 3300005539 Bacteria 1731
25 Ga0070665_100001203 3300005548 Bacteria 31567
26 Ga0070665_100049447 3300005548 Bacteria 4218
27 Ga0070665_100120572 3300005548 Bacteria 2624
28 Ga0068855_100036034 3300005563 Bacteria 5890
29 Ga0068855_100277038 3300005563 Bacteria 1864
30 Ga0068856_100188265 3300005614 Bacteria 2077
31 Ga0068852_100043566 3300005616 Bacteria 3807
32 Ga0075365_10101227 3300006038 Bacteria 1973
33 Ga0075368_10041340 3300006042 Bacteria 1811
34 Ga0075363_100022545 3300006048 Bacteria 3184
35 Ga0075364_10026160 3300006051 Bacteria 3721
36 Ga0075364_10034439 3300006051 Bacteria 3267
37 Ga0075362_10003000 3300006177 Bacteria 5806
38 Ga0075362_10007235 3300006177 Bacteria 4189
39 Ga0075362_10008557 3300006177 Bacteria 3919
40 Ga0075362_10021011 3300006177 Bacteria 2734
41 Ga0075367_10005138 3300006178 Bacteria 6461
42 Ga0075367_10013647 3300006178 Bacteria 4375
43 Ga0075367_10100008 3300006178 Bacteria 1771
44 Ga0075367_10103156 3300006178 Bacteria 1745
45 Ga0075369_10001037 3300006186 Bacteria 9292
46 Ga0075369_10051546 3300006186 Bacteria 1782
47 Ga0075366_10022610 3300006195 Bacteria 3660
48 Ga0075366_10026247 3300006195 Bacteria 3410
49 Ga0075370_10009326 3300006353 Bacteria 5093
50 Ga0075370_10012187 3300006353 Bacteria 4537
51 Ga0075370_10028162 3300006353 Bacteria 3121
52 Ga0075370_10039452 3300006353 Bacteria 2660
53 Ga0068865_100099805 3300006881 Bacteria 2123
54 Ga0079104_1002816 3300006946 Bacteria 8752
55 Ga0099826_10175287 3300006948 Bacteria 1199
56 Ga0075435_100401810 3300007076 Bacteria 1178
57 Ga0105251_10001033 3300009011 Bacteria 24453
58 Ga0105250_10092378 3300009092 Bacteria 1232
59 Ga0105240_10056729 3300009093 Bacteria 4899
60 Ga0105240_10229184 3300009093 Bacteria 2160
61 Ga0105240_10332795 3300009093 Bacteria 1727
62 Ga0105245_10586357 3300009098 Bacteria 1140
63 Ga0105243_10095300 3300009148 Bacteria 2459
64 Ga0105241_10623929 3300009174 Bacteria 976
65 Ga0105237_10013848 3300009545 Bacteria 8441
66 Ga0105237_10378817 3300009545 Bacteria 1419
67 Ga0105237_10697001 3300009545 Bacteria 1022
68 Ga0105238_10036745 3300009551 Bacteria 4980
69 Ga0105238_10117379 3300009551 Bacteria 2641
70 Ga0157347_1010374 3300012502 Bacteria 977
71 Ga0157373_10001201 3300013100 Bacteria 19803
72 Ga0157371_10000277 3300013102 Bacteria 69357
73 Ga0157370_10077567 3300013104 Bacteria 3130
74 Ga0157370_10143383 3300013104 Bacteria 2225
75 Ga0157369_10023330 3300013105 Bacteria 6892
76 Ga0182006_1041577 3300015261 Bacteria 1804
77 Ga0209758_1033986 3300025297 Bacteria 2037
78 Ga0209050_1000402 3300025298 Bacteria 80873
79 Ga0209051_1000099 3300025303 Bacteria 165161
80 Ga0207645_10149532 3300025907 Bacteria 1524
81 Ga0207705_10007175 3300025909 Bacteria 8209
82 Ga0207684_10002166 3300025910 Bacteria 20113
83 Ga0207707_10079556 3300025912 Bacteria 2862
84 Ga0207707_10246904 3300025912 Bacteria 1551
85 Ga0207695_10044340 3300025913 Bacteria 4730
86 Ga0207671_10064098 3300025914 Bacteria 2732
87 Ga0207660_10318395 3300025917 Bacteria 1242
88 Ga0207660_10458740 3300025917 Bacteria 1031
89 Ga0207657_10030762 3300025919 Bacteria 4868
90 Ga0207652_10052271 3300025921 Bacteria 3506
91 Ga0207694_10040599 3300025924 Bacteria 3583
92 Ga0207694_10048827 3300025924 Bacteria 3275
93 Ga0207694_10566242 3300025924 Bacteria 954
94 Ga0207690_10858461 3300025932 Bacteria 752
95 Ga0207706_10044280 3300025933 Bacteria 3945
96 Ga0207669_10068722 3300025937 Bacteria 2214
97 Ga0207689_10442096 3300025942 Bacteria 1086
98 Ga0207661_10055260 3300025944 Bacteria 3184
99 Ga0207667_10108499 3300025949 Bacteria 2863
100 Ga0207667_10997965 3300025949 Bacteria 825
101 Ga0207639_10229312 3300026041 Bacteria 1609
102 Ga0207678_10089868 3300026067 Bacteria 2625
103 Ga0207702_10539469 3300026078 Bacteria 1140
104 Ga0207648_10098164 3300026089 Bacteria 2564
105 Ga0207674_10054138 3300026116 Bacteria 4087
106 Ga0207674_10327700 3300026116 Bacteria 1481
107 Ga0209281_1000202 3300027111 Bacteria 135240
108 Ga0209996_1003350 3300027395 Bacteria 2013
109 Ga0209995_1020438 3300027471 Bacteria 1095
110 Ga0209983_1001258 3300027665 Bacteria 5634
111 Ga0209282_1153935 3300027666 Bacteria 1107
112 Ga0209971_1001741 3300027682 Bacteria 5339
113 Ga0268266_10002387 3300028379 Bacteria 20279
114 Ga0268266_10031649 3300028379 Bacteria 4493
115 Ga0316177_1028638 3300030731 Bacteria 1957
116 Ga0316183_1044753 3300030742 Bacteria 1582
117 Ga0316181_1006671 3300030744 Bacteria 7693
118 Ga0316182_1006463 3300030745 Bacteria 1655
119 Ga0265332_10000015 3300031238 Bacteria 243944
120 Ga0307408_100029867 3300031548 Bacteria 3780
121 Ga0307508_10049849 3300031616 Bacteria 3729
122 Ga0316576_10177783 3300031727 Bacteria 1605
123 Ga0307516_10100638 3300031730 Bacteria 2706
124 Ga0307405_10071193 3300031731 Bacteria 2236
125 Ga0307413_10110056 3300031824 Bacteria 1842
126 Ga0307406_10011586 3300031901 Bacteria 5009
127 Ga0307414_10047249 3300032004 Bacteria 2961
128 Ga0307414_10057440 3300032004 Bacteria 2735
129 Ga0316584_0008920 3300036712 Bacteria 6937
130 Ga0395898_0100363 3300037466 Bacteria 2779
131 Ga0395898_0187190 3300037466 Bacteria 1978
132 Ga0395905_0721983 3300037471 Bacteria 899
133 Ga0400483_033934 3300039062 Bacteria 1402
134 Ga0400483_228208 3300039062 Bacteria 6677
135 Ga0436363_0601723 3300039450 Bacteria 1697
136 Ga0439438_003549 3300041405 Bacteria 6270
137 Ga0439438_004978 3300041405 Bacteria 4962
138 Ga0439438_036650 3300041405 Bacteria 1285
139 Ga0451793_1391072 3300041452 Bacteria 1757
140 Ga0439431_0108216 3300041997 Bacteria 768
141 Ga0439437_001970 3300042000 Bacteria 2180
142 Ga0439449_0000091 3300042007 Bacteria 29348
143 Ga0439456_004242 3300042013 Bacteria 2908
144 Ga0450911_000026 3300042115 Bacteria 82955
145 Ga0450903_023506 3300042138 Bacteria 948
146 Ga0450904_000063 3300042139 Bacteria 23972
147 Ga0439446_0016578 3300042156 Bacteria 2053
148 Ga0439435_0070023 3300042436 Bacteria 1037
149 Ga0439459_0005878 3300042438 Bacteria 2029
150 Ga0450916_000591 3300042530 Bacteria 3245
151 Ga0450893_0004351 3300042532 Bacteria 2256
152 Ga0451577_0176317 3300042876 Bacteria 1927
153 Ga0466972_0168250 3300044658 Bacteria 1029
154 Ga0453684_0041165 3300044712 Bacteria 6255
155 Ga0453684_0053698 3300044712 Bacteria 5257
156 Ga0453684_0258898 3300044712 Bacteria 1994
157 Ga0466959_0141115 3300045049 Bacteria 1703
158 Ga0466959_0189823 3300045049 Bacteria 1434
159 Ga0451576_0006875 3300045051 Bacteria 13778
160 Ga0451576_0105205 3300045051 Bacteria 2936
161 Ga0451576_0119909 3300045051 Bacteria 2739
162 Ga0451576_1357009 3300045051 Bacteria 740
163 Ga0466967_0617267 3300045976 Bacteria 1071
164 Ga0495590_0105782 3300046457 Bacteria 1002
165 Ga0495591_017522 3300046458 Bacteria 2457
166 Ga0495653_0043675 3300046463 Bacteria 3483
167 Ga0495596_0277088 3300046500 Bacteria 651
168 Ga0495607_0009993 3300046501 Bacteria 6392
169 Ga0495607_0085596 3300046501 Bacteria 1721
170 Ga0495610_0007812 3300046512 Bacteria 7044
171 Ga0495632_0006177 3300046519 Bacteria 7758
172 Ga0495643_0005575 3300046522 Bacteria 8471
173 Ga0495643_0078560 3300046522 Bacteria 1722
174 Ga0495597_0041243 3300046542 Bacteria 2063
175 Ga0495611_0107938 3300046648 Bacteria 1295
176 Ga0495625_0129371 3300046660 Bacteria 1711
177 Ga0495625_0384678 3300046660 Bacteria 880
178 Ga0495661_0054812 3300046665 Bacteria 2392
179 Ga0495671_0009679 3300046692 Bacteria 5375
180 Ga0495649_0026031 3300046694 Bacteria 3256
181 Ga0495660_0133051 3300046810 Bacteria 1245
182 Ga0495676_0016895 3300047321 Bacteria 6460
183 Ga0495683_0344851 3300047323 Bacteria 630
184 Ga0495687_007052 3300047443 Bacteria 6721
185 Ga0495679_017006 3300047446 Bacteria 2614
186 Ga0495686_0002628 3300047472 Bacteria 16632
187 Ga0495686_0004841 3300047472 Bacteria 10864
188 Ga0496110_0036988 3300048913 Bacteria 4241
189 Ga0496110_0112042 3300048913 Bacteria 2453
190 Ga0496111_0000441 3300048914 Bacteria 21050
191 Ga0496117_0106688 3300048920 Bacteria 1757
192 Ga0496121_0000380 3300048924 Bacteria 90959
193 Ga0496121_0004305 3300048924 Bacteria 19283
194 Ga0496121_0075177 3300048924 Bacteria 2700
195 Ga0496122_0015324 3300048925 Bacteria 7334
196 Ga0496125_0093253 3300048928 Bacteria 2248
197 Ga0501032_0015855 3300049569 Bacteria 5312
198 Ga0501034_0643665 3300049571 Bacteria 962
199 Ga0501073_0023047 3300049589 Bacteria 4476
200 Ga0501226_000005 3300049853 Bacteria 271019
201 nmdc:mga03683_18777_c1 3300050489 Bacteria 2633
202 nmdc:mga03683_52866_c1 3300050489 Bacteria 1699
203 nmdc:mga03683_5784_c1 3300050489 Bacteria 4198
204 nmdc:mga03n38_114731_c1 3300050490 Bacteria 1317
205 nmdc:mga03n38_63541_c1 3300050490 Bacteria 1687
206 nmdc:mga00v17_20359_c1 3300050491 Bacteria 3800
207 nmdc:mga00v17_452924_c1 3300050491 Bacteria 833
208 nmdc:mga0yw44_1911_c1 3300050492 Bacteria 8600
209 nmdc:mga0yw44_63227_c1 3300050492 Bacteria 2275
210 nmdc:mga0yw44_81097_c1 3300050492 Bacteria 2033
211 nmdc:mga0yw44_93362_c1 3300050492 Bacteria 1905
212 nmdc:mga0k408_26694_c1 3300050493 Bacteria 3276
213 nmdc:mga0k408_3111_c1 3300050493 Bacteria 8793
214 nmdc:mga0k408_57566_c1 3300050493 Bacteria 2257
215 nmdc:mga06z11_113243_c1 3300050494 Bacteria 1505
216 nmdc:mga06z11_164174_c1 3300050494 Bacteria 1271
217 nmdc:mga06z11_170890_c1 3300050494 Bacteria 1248
218 nmdc:mga04h51_47497_c1 3300050495 Bacteria 1427
219 nmdc:mga07m45_18434_c1 3300050496 Bacteria 3768
220 nmdc:mga07m45_215943_c1 3300050496 Bacteria 1116
221 nmdc:mga07m45_30377_c1 3300050496 Bacteria 2993
222 nmdc:mga07m45_338969_c1 3300050496 Bacteria 874
223 nmdc:mga07m45_396889_c1 3300050496 Bacteria 801
224 nmdc:mga0sz30_4577_c2 3300050516 Bacteria 3018
225 nmdc:mga0sz30_76250_c1 3300050516 Bacteria 1447
226 nmdc:mga0sz30_99233_c1 3300050516 Bacteria 1271
227 Ga0500643_000026 3300053087 Bacteria 259231
228 Ga0500651_0084856 3300053093 Bacteria 1958
229 Ga0500562_103197 3300053108 Bacteria 776
230 Ga0500568_0028992 3300053139 Bacteria 2302
231 Ga0500573_0014476 3300053140 Bacteria 4466
232 2524000907 2523533628 Bacteria 4098242
233 2599723103 2599185236 Bacteria 6875203
234 2600375236 2600254933 Bacteria 4750527
235 2644029934 2643221603 Bacteria 6147767
236 2644127171 2643221622 Bacteria 4212502
237 2652545532 2651869719 Bacteria 6047974
238 2687578764 2687453129 Bacteria 4387428
239 2729146218 2728369097 Bacteria 4333476
240 2740990446 2740891818 Bacteria 6711283
241 2793281262 2791355253 Bacteria 5171699
242 2808904951 2808606373 Bacteria 4423627
243 2819684170 2818991461 Bacteria 7026071
244 2819690197 2818991462 Bacteria 4320267
245 2819726258 2818991469 Bacteria 4644110
246 2854897136 2854896431 Bacteria 5869725
247 2854918245 2854916844 Bacteria 5725939
248 2904452559 2904449895 Bacteria 6927402
249 2904460842 2904456579 Bacteria 6819253
250 2904768516 2904765812 Bacteria 5369154
251 2904772212 2904770941 Bacteria 5580202
252 2908815871 2908811453 Bacteria 5478616
253 2919421891 2919420072 Bacteria 5390363
254 2919434551 2919432681 Bacteria 5390474
255 2929522808 2929520902 Bacteria 6765052
256 2954769002 2954767861 Bacteria 5535784
257 640489073 640427133 Bacteria 4567418
258 651177167 651053060 Bacteria 4689946
259 Ga0495687_002995
260 JGI25153J46596_10003893
261 Ga0006562J51391_1077671
262 Ga0006562J51391_1077673
263 Ga0055530_10004592
264 Ga0055540_1001733
265 Ga0065714_10144353
266 Ga0070658_10152500
267 Ga0070676_10463317
268 Ga0070683_100719953
269 Ga0070680_100241178
270 Ga0070680_100372711
271 Ga0070674_100392360
272 Ga0070667_100153399
273 Ga0070663_100078436
274 Ga0070662_100205951
275 Ga0070681_10136871
276 Ga0070681_10182029
277 Ga0070681_10226521
278 Ga0068867_100034598
279 Ga0070706_100101732
280 Ga0070679_100028124
281 Ga0070679_100070713
282 Ga0068853_100220823
283 Ga0070665_100001203
284 Ga0070665_100049447
285 Ga0070665_100120572
286 Ga0068855_100036034
287 Ga0068855_100277038
288 Ga0068856_100188265
289 Ga0068852_100043566
290 Ga0075365_10101227
291 Ga0075368_10041340
292 Ga0075363_100022545
293 Ga0075364_10026160
294 Ga0075364_10034439
295 Ga0075362_10003000
296 Ga0075362_10007235
297 Ga0075362_10008557
298 Ga0075362_10021011
299 Ga0075367_10005138
300 Ga0075367_10013647
301 Ga0075367_10100008
302 Ga0075367_10103156
303 Ga0075369_10001037
304 Ga0075369_10051546
305 Ga0075366_10022610
306 Ga0075366_10026247
307 Ga0075370_10009326
308 Ga0075370_10012187
309 Ga0075370_10028162
310 Ga0075370_10039452
311 Ga0068865_100099805
312 Ga0079104_1002816
313 Ga0099826_10175287
314 Ga0075435_100401810
315 Ga0105251_10001033
316 Ga0105250_10092378
317 Ga0105240_10056729
318 Ga0105240_10229184
319 Ga0105240_10332795
320 Ga0105245_10586357
321 Ga0105243_10095300
322 Ga0105241_10623929
323 Ga0105237_10013848
324 Ga0105237_10378817
325 Ga0105237_10697001
326 Ga0105238_10036745
327 Ga0105238_10117379
328 Ga0157347_1010374
329 Ga0157373_10001201
330 Ga0157371_10000277
331 Ga0157370_10077567
332 Ga0157370_10143383
333 Ga0157369_10023330
334 Ga0182006_1041577
335 Ga0209758_1033986
336 Ga0209050_1000402
337 Ga0209051_1000099
338 Ga0207645_10149532
339 Ga0207705_10007175
340 Ga0207684_10002166
341 Ga0207707_10079556
342 Ga0207707_10246904
343 Ga0207695_10044340
344 Ga0207671_10064098
345 Ga0207660_10318395
346 Ga0207660_10458740
347 Ga0207657_10030762
348 Ga0207652_10052271
349 Ga0207694_10040599
350 Ga0207694_10048827
351 Ga0207694_10566242
352 Ga0207690_10858461
353 Ga0207706_10044280
354 Ga0207669_10068722
355 Ga0207689_10442096
356 Ga0207661_10055260
357 Ga0207667_10108499
358 Ga0207667_10997965
359 Ga0207639_10229312
360 Ga0207678_10089868
361 Ga0207702_10539469
362 Ga0207648_10098164
363 Ga0207674_10054138
364 Ga0207674_10327700
365 Ga0209281_1000202
366 Ga0209996_1003350
367 Ga0209995_1020438
368 Ga0209983_1001258
369 Ga0209282_1153935
370 Ga0209971_1001741
371 Ga0268266_10002387
372 Ga0268266_10031649
373 Ga0316177_1028638
374 Ga0316183_1044753
375 Ga0316181_1006671
376 Ga0316182_1006463
377 Ga0265332_10000015
378 Ga0307408_100029867
379 Ga0307508_10049849
380 Ga0316576_10177783
381 Ga0307516_10100638
382 Ga0307405_10071193
383 Ga0307413_10110056
384 Ga0307406_10011586
385 Ga0307414_10047249
386 Ga0307414_10057440
387 Ga0316584_0008920
388 Ga0395898_0100363
389 Ga0395898_0187190
390 Ga0395905_0721983
391 Ga0400483_033934
392 Ga0400483_228208
393 Ga0436363_0601723
394 Ga0439438_003549
395 Ga0439438_004978
396 Ga0439438_036650
397 Ga0451793_1391072
398 Ga0439431_0108216
399 Ga0439437_001970
400 Ga0439449_0000091
401 Ga0439456_004242
402 Ga0450911_000026
403 Ga0450903_023506
404 Ga0450904_000063
405 Ga0439446_0016578
406 Ga0439435_0070023
407 Ga0439459_0005878
408 Ga0450916_000591
409 Ga0450893_0004351
410 Ga0451577_0176317
411 Ga0466972_0168250
412 Ga0453684_0041165
413 Ga0453684_0053698
414 Ga0453684_0258898
415 Ga0466959_0141115
416 Ga0466959_0189823
417 Ga0451576_0006875
418 Ga0451576_0105205
419 Ga0451576_0119909
420 Ga0451576_1357009
421 Ga0466967_0617267
422 Ga0495590_0105782
423 Ga0495591_017522
424 Ga0495653_0043675
425 Ga0495596_0277088
426 Ga0495607_0009993
427 Ga0495607_0085596
428 Ga0495610_0007812
429 Ga0495632_0006177
430 Ga0495643_0005575
431 Ga0495643_0078560
432 Ga0495597_0041243
433 Ga0495611_0107938
434 Ga0495625_0129371
435 Ga0495625_0384678
436 Ga0495661_0054812
437 Ga0495671_0009679
438 Ga0495649_0026031
439 Ga0495660_0133051
440 Ga0495676_0016895
441 Ga0495683_0344851
442 Ga0495687_007052
443 Ga0495679_017006
444 Ga0495686_0002628
445 Ga0495686_0004841
446 Ga0496110_0036988
447 Ga0496110_0112042
448 Ga0496111_0000441
449 Ga0496117_0106688
450 Ga0496121_0000380
451 Ga0496121_0004305
452 Ga0496121_0075177
453 Ga0496122_0015324
454 Ga0496125_0093253
455 Ga0501032_0015855
456 Ga0501034_0643665
457 Ga0501073_0023047
458 Ga0501226_000005
459 nmdc:mga03683_18777_c1
460 nmdc:mga03683_52866_c1
461 nmdc:mga03683_5784_c1
462 nmdc:mga03n38_114731_c1
463 nmdc:mga03n38_63541_c1
464 nmdc:mga00v17_20359_c1
465 nmdc:mga00v17_452924_c1
466 nmdc:mga0yw44_1911_c1
467 nmdc:mga0yw44_63227_c1
468 nmdc:mga0yw44_81097_c1
469 nmdc:mga0yw44_93362_c1
470 nmdc:mga0k408_26694_c1
471 nmdc:mga0k408_3111_c1
472 nmdc:mga0k408_57566_c1
473 nmdc:mga06z11_113243_c1
474 nmdc:mga06z11_164174_c1
475 nmdc:mga06z11_170890_c1
476 nmdc:mga04h51_47497_c1
477 nmdc:mga07m45_18434_c1
478 nmdc:mga07m45_215943_c1
479 nmdc:mga07m45_30377_c1
480 nmdc:mga07m45_338969_c1
481 nmdc:mga07m45_396889_c1
482 nmdc:mga0sz30_4577_c2
483 nmdc:mga0sz30_76250_c1
484 nmdc:mga0sz30_99233_c1
485 Ga0500643_000026
486 Ga0500651_0084856
487 Ga0500562_103197
488 Ga0500568_0028992
489 Ga0500573_0014476
490 2524000907
491 2599723103
492 2600375236
493 2644029934
494 2644127171
495 2652545532
496 2687578764
497 2729146218
498 2740990446
499 2793281262
500 2808904951
501 2819684170
502 2819690197
503 2819726258
504 2854897136
505 2854918245
506 2904452559
507 2904460842
508 2904768516
509 2904772212
510 2908815871
511 2919421891
512 2919434551
513 2929522808
514 2954769002
515 640489073
516 651177167

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01810

LysE

LysE type translocator

42

230

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
7vcf-assembly1.cif.gz_A cryo-em structure of chlamydomonas toc-tic supercomplex 0.5313 6 198
7vcf-assembly1.cif.gz_A cryo-em structure of chlamydomonas toc-tic supercomplex 0.5019 6 198
6kkl-assembly1.cif.gz_A crystal structure of drug:proton antiporter-1 (dha1) family sotb, in the inward conformation (h115n mutant) 0.4371 6 200
8jt9-assembly1.cif.gz_A human vmat2 complex with ketanserin 0.4283 15 201
8jta-assembly1.cif.gz_A human vmat2 complex with tetrabenazine 0.4245 19 201
ID Description Score Start End Superfamily
af_P67127_16_204_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.638 12 199 1.20.1250.20
af_P67127_16_204_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.6214 12 199 1.20.1250.20
af_P76264_30_182_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.5497 25 199 1.20.1250.20
af_Q2R4J1_1_279_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.546 3 201 1.20.1250.20
af_P76264_30_182_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.5368 25 199 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A3B9IMC7-F1-model_v4 Amino acid transporter 0.9697 1 205 GO:0005886
GO:0015171
AF-A0A4P8GNQ9-F1-model_v4 Amino acid transporter 0.9678 3 200 GO:0005886
GO:0015171
AF-A0A7W9ZHF8-F1-model_v4 L-lysine exporter family protein LysE/ArgO 0.9668 5 204 GO:0005886
GO:0015171
AF-A0A1H7K9V9-F1-model_v4 L-lysine exporter family protein LysE/ArgO 0.9666 3 200 GO:0005886
GO:0015171
AF-A0A255HHC8-F1-model_v4 Amino acid transporter 0.9657 2 200 GO:0005886
GO:0015171

Map