F368451

General Info

Members Datasets Scaffolds Average Seq Length
258 200 516 472

Family's Representative Sequence

Representative Sequence 3300053136|Ga0500559_0041611|Ga0500559_0041611_61_1644
Length 527
Sequence VTIGQHPTPSVVTHTAGVFLLTTAMRRWWPNDARTGRGNATRLANEMEKEPTTVFNSPDEVLGFIRDEDVKFIDVRFSDLPGIMQHFTVPAQSWDADAIEGGVAFDGSSVRGFQAIHESDMLLLPDLATARVDAFRAEKTLIINHFVHDPVTREPYSRDPRNIARKAEQYINESGVADLAYFGPEAEFYMFDSVRFDTTENASFHEIDSESGWWNTGADEAGGNLGYKVKYKGGYFPVSPTDHYADLRDRIVLNLISAGFTVERAHHEVGTAGQAEINYRFNTLLHAADDLQLFKYIVKNTAWAAGKTATFMPKPLFGDNGSGMHTHQSLWKDGAPLFYDESGYAGLSDTARHYIGGILHHAPSLLAFTNPTVNSYHRLVPGFEAPVSLVYSQRNRSACVRIPITGSNAKAKRIEFRCPDSSGNPYLAFSAMLMAGLDGIKNKIEPPTPVDKDLYELPPEEAKEVNHVPGSLPEVLDNLESDHDFLLEGGVFTPDVISTWIALKRDSEIDPLRLRPHPYEFALYYDV

Samples

Sample ID Description Type Environment
1 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
2 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
3 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
4 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
5 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
6 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
7 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
8 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
12 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
13 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
14 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
15 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
16 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
17 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
18 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
19 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
20 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
21 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
22 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
23 3300006194 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 Metagenome Rhizosphere
24 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
25 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
26 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
27 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
28 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
29 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
30 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
31 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
32 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
35 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
36 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
37 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
38 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
39 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
40 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
41 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
42 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
43 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
44 3300020078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
45 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
46 3300020610 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
47 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
48 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
49 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
65 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
66 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
67 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
68 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
69 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
70 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
71 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
72 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
73 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
74 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
75 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
76 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
77 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
78 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
79 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
80 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
81 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
82 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
83 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
84 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
85 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
86 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
87 3300033529 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
88 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
89 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
90 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
91 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
92 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
93 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
94 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
95 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
96 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
97 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
98 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
99 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
100 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
101 3300039145 Coralloid root microbial communities from Jiquipilas, Chiapas, Mexico - JP6-T1 Metagenome Unclassified
102 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
103 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
104 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
105 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
106 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
107 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
108 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
109 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
110 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
111 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
112 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
113 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
114 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
115 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
116 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
117 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
118 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
119 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
120 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
121 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
122 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
123 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
124 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
125 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
126 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
127 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
128 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
129 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
130 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
131 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
132 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
133 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
134 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
135 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
136 3300049532 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_B_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
137 3300049533 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
138 3300049534 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_B_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
139 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
142 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
144 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
147 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
148 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
149 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
151 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
152 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
153 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
154 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
155 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
156 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
157 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
158 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
159 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
160 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
161 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
162 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
163 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
164 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
165 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
166 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
167 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
168 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
169 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
170 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
171 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
172 3300059493 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 19R_SW_T1_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
173 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
174 2558860280 Kutzneria sp. 744 Isolate Unclassified
175 2643221613 Oerskovia sp. Root22 Isolate Unclassified
176 2643221681 Aeromicrobium sp. Root472D3 Isolate Unclassified
177 2643221711 Terrabacter sp. Root85 Isolate Unclassified
178 2643221721 Oerskovia sp. Root918 Isolate Unclassified
179 2728369276 Kineococcus rhizosphaerae DSM 19711 Isolate Rhizosphere
180 2751185734 Saccharothrix sp. NRRL B-16314 Isolate Rhizosphere
181 2775506925 Saccharopolyspora phatthalungensis NRRL B-24798 Isolate Rhizosphere
182 2795385470 Labedaea rhizosphaerae DSM 45361 Isolate Rhizosphere
183 2795385472 Herbihabitans rhizosphaerae DSM 101727 Isolate Rhizosphere
184 2811994882 Terrabacter sp. SLBN-196 Isolate Unclassified
185 2816332119 Kribbella amoyensis DSM 24683 Isolate Rhizosphere
186 2818991318 Humibacillus xanthopallidus SLBN-155 Isolate Unclassified
187 2818991458 Terrabacter sp. 3211 Isolate Rhizosphere
188 2818991462 Terrabacter sp. 3264 Isolate Rhizosphere
189 2818991469 Terrabacter lapilli 3265 Isolate Rhizosphere
190 2835188231 Isoptericola variabilis JZ7 Isolate Unclassified
191 2839986021 Cellulosimicrobium cellulans JZ5 Isolate Unclassified
192 2857481737 Nocardioides sp. R-74106 Isolate Unclassified
193 2863067949 Saccharopolyspora phatthalungensis DSM 45584 (Annotation) (version 2) Isolate Rhizosphere
194 2866612099 Amycolatopsis suaedae 8-3EHSu Isolate Unclassified
195 2870721527 Saccharothrix ecbatanensis DSM 45486 Isolate Rhizosphere
196 2887443736 Ruania rhizosphaerae LNNU 22110 Isolate Rhizosphere
197 2923516293 Pseudoxanthomonas mexicana SLBN-89 Isolate Rhizosphere
198 2932431166 Cellulosimicrobium sp. 4261 Isolate Rhizosphere
199 2935890801 Oerskovia enterophila 3230 Isolate Rhizosphere
200 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 84.5
Metatranscriptomes 5.04
Isolates 10.47

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.94
Nodule 0
Rhizoplane 6.2
Rhizosphere 82.17
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0500559_0041611 3300053136 Bacteria 2003
2 LJQas_1003950 3300000549 Bacteria 1955
3 JGI24739J22299_10013999 3300001989 Bacteria 2921
4 JGI24739J22299_10025312 3300001989 Bacteria 2087
5 JGI24737J22298_10006828 3300001990 Bacteria 3878
6 JGI24737J22298_10011685 3300001990 Bacteria 2873
7 JGI24735J21928_10028460 3300002067 Bacteria 1668
8 JGI25152J39213_1000004 3300002773 Bacteria 191383
9 JGI25406J46586_10017444 3300003203 Bacteria 2968
10 Ga0006562J51391_1030144 3300003578 Bacteria 1581
11 Ga0070668_100064414 3300005347 Bacteria 2842
12 Ga0070714_100008321 3300005435 Bacteria 8094
13 Ga0070710_10001080 3300005437 Bacteria 12905
14 Ga0070662_100131854 3300005457 Bacteria 1928
15 Ga0070707_100023849 3300005468 Bacteria 5788
16 Ga0068855_100173552 3300005563 Bacteria 2440
17 Ga0068857_100140740 3300005577 Bacteria 2181
18 Ga0068852_100057570 3300005616 Bacteria 3364
19 Ga0068861_100010603 3300005719 Bacteria 6398
20 Ga0081455_10004084 3300005937 Bacteria 16523
21 Ga0081455_10036296 3300005937 Bacteria 4391
22 Ga0081455_10110284 3300005937 Bacteria 2188
23 Ga0081455_10140533 3300005937 Bacteria 1876
24 Ga0081538_10000025 3300005981 Bacteria 129366
25 Ga0081539_10000085 3300005985 Bacteria 217816
26 Ga0075364_10001747 3300006051 Bacteria 11983
27 Ga0075432_10000964 3300006058 Bacteria 9116
28 Ga0075432_10005778 3300006058 Bacteria 4209
29 Ga0075427_10006755 3300006194 Bacteria 1672
30 Ga0075428_100019851 3300006844 Bacteria 7439
31 Ga0075428_100081832 3300006844 Bacteria 3523
32 Ga0075430_100007049 3300006846 Bacteria 9479
33 Ga0075431_100002552 3300006847 Bacteria 17581
34 Ga0075431_100042234 3300006847 Bacteria 4702
35 Ga0075433_10000510 3300006852 Bacteria 25335
36 Ga0075433_10011478 3300006852 Bacteria 7133
37 Ga0075434_100000935 3300006871 Bacteria 23462
38 Ga0075434_100012079 3300006871 Bacteria 8176
39 Ga0075429_100018989 3300006880 Bacteria 5955
40 Ga0075429_100171079 3300006880 Bacteria 1903
41 Ga0075436_100000805 3300006914 Bacteria 20821
42 Ga0075435_100002900 3300007076 Bacteria 11514
43 Ga0075435_100018305 3300007076 Bacteria 5324
44 Ga0111539_10006590 3300009094 Bacteria 14963
45 Ga0114129_10004382 3300009147 Bacteria 19907
46 Ga0114129_10017120 3300009147 Bacteria 10322
47 Ga0114129_10035809 3300009147 Bacteria 7010
48 Ga0114129_10406630 3300009147 Bacteria 1793
49 Ga0105243_10021700 3300009148 Bacteria 4875
50 Ga0105243_10031022 3300009148 Bacteria 4120
51 Ga0105242_10007551 3300009176 Bacteria 8368
52 Ga0105238_10045984 3300009551 Bacteria 4408
53 Ga0105238_10149839 3300009551 Bacteria 2308
54 Ga0105249_10104071 3300009553 Bacteria 2674
55 Ga0105249_10114232 3300009553 Bacteria 2556
56 Ga0157370_10003107 3300013104 Bacteria 19657
57 Ga0157369_10018329 3300013105 Bacteria 7849
58 Ga0157378_10023640 3300013297 Bacteria 5406
59 Ga0157372_10017288 3300013307 Bacteria 7743
60 Ga0157372_10066395 3300013307 Bacteria 4053
61 Ga0197907_10301849 3300020069 Bacteria 1776
62 Ga0206351_10726834 3300020077 Bacteria 1689
63 Ga0206352_11345653 3300020078 Bacteria 1754
64 Ga0206350_11103853 3300020080 Bacteria 1537
65 Ga0154015_1286325 3300020610 Bacteria 1728
66 Ga0213875_10000060 3300021388 Bacteria 135020
67 Ga0213875_10002210 3300021388 Bacteria 11845
68 Ga0224712_10025790 3300022467 Bacteria 2070
69 Ga0207692_10015456 3300025898 Bacteria 3359
70 Ga0207684_10047665 3300025910 Bacteria 3634
71 Ga0207695_10023188 3300025913 Bacteria 7022
72 Ga0207695_10102955 3300025913 Bacteria 2847
73 Ga0207652_10221368 3300025921 Bacteria 1705
74 Ga0207646_10016173 3300025922 Bacteria 7011
75 Ga0207700_10093347 3300025928 Bacteria 2381
76 Ga0207664_10001481 3300025929 Bacteria 15400
77 Ga0207664_10065518 3300025929 Bacteria 2909
78 Ga0207664_10071332 3300025929 Bacteria 2798
79 Ga0207706_10040607 3300025933 Bacteria 4124
80 Ga0207686_10127815 3300025934 Bacteria 1739
81 Ga0207709_10045257 3300025935 Bacteria 2664
82 Ga0207661_10048211 3300025944 Bacteria 3384
83 Ga0207667_10075969 3300025949 Bacteria 3487
84 Ga0207668_10006203 3300025972 Bacteria 7058
85 Ga0207702_10054579 3300026078 Bacteria 3386
86 Ga0207675_100004165 3300026118 Bacteria 13997
87 Ga0207428_10000586 3300027907 Bacteria 43007
88 Ga0207428_10013611 3300027907 Bacteria 7097
89 Ga0307511_10003120 3300030521 Bacteria 17081
90 Ga0307512_10079582 3300030522 Bacteria 2366
91 Ga0316177_1027911 3300030731 Bacteria 2461
92 Ga0316176_1098856 3300030732 Bacteria 3935
93 Ga0314311_1033288 3300030733 Bacteria 8855
94 Ga0307509_10219416 3300031507 Bacteria 1717
95 Ga0307408_100115840 3300031548 Bacteria 2067
96 Ga0316579_10009979 3300031691 Bacteria 4003
97 Ga0316576_10000124 3300031727 Bacteria 29116
98 Ga0316576_10002976 3300031727 Bacteria 9828
99 Ga0316576_10017913 3300031727 Bacteria 4825
100 Ga0316576_10074020 3300031727 Bacteria 2517
101 Ga0316576_10128864 3300031727 Bacteria 1903
102 Ga0316578_10065148 3300031728 Bacteria 2151
103 Ga0307405_10034655 3300031731 Bacteria 3006
104 Ga0316577_10004924 3300031733 Bacteria 6955
105 Ga0316577_10093595 3300031733 Bacteria 1682
106 Ga0307413_10016240 3300031824 Bacteria 3840
107 Ga0307410_10010372 3300031852 Bacteria 5273
108 Ga0307410_10097179 3300031852 Bacteria 2103
109 Ga0307406_10011408 3300031901 Bacteria 5042
110 Ga0307412_10053220 3300031911 Bacteria 2683
111 Ga0307409_100000379 3300031995 Bacteria 18847
112 Ga0307409_100205140 3300031995 Bacteria 1767
113 Ga0307416_100000521 3300032002 Bacteria 19599
114 Ga0307416_100069518 3300032002 Bacteria 2914
115 Ga0307416_100133753 3300032002 Bacteria 2238
116 Ga0307416_100202647 3300032002 Bacteria 1884
117 Ga0307415_100003308 3300032126 Bacteria 8179
118 Ga0316583_10021720 3300032133 Bacteria 2300
119 Ga0307507_10000011 3300033179 Bacteria 261849
120 Ga0307507_10012011 3300033179 Bacteria 10797
121 Ga0316588_1015676 3300033528 Bacteria 1672
122 Ga0316587_1006556 3300033529 Bacteria 1782
123 Ga0373956_0001135 3300035119 Bacteria 11000
124 Ga0316574_0059816 3300035398 Bacteria 2390
125 Ga0373935_0000546 3300035692 Bacteria 19533
126 Ga0373927_0033817 3300035695 Bacteria 3327
127 Ga0373933_0122767 3300035724 Bacteria 1628
128 Ga0373947_0000001 3300035725 Bacteria 510932
129 Ga0316584_0002093 3300036712 Bacteria 12496
130 Ga0316584_0023329 3300036712 Bacteria 4520
131 Ga0316584_0031538 3300036712 Bacteria 3919
132 Ga0395899_0178533 3300037312 Bacteria 1492
133 Ga0395900_0078851 3300037418 Bacteria 3384
134 Ga0395900_0114480 3300037418 Bacteria 2768
135 Ga0395898_0044251 3300037466 Bacteria 4384
136 Ga0316581_0001105 3300037588 Bacteria 5859
137 Ga0436364_0061454 3300037853 Bacteria 95434
138 Ga0395901_0002330 3300038443 Bacteria 19348
139 Ga0395901_0009202 3300038443 Bacteria 10006
140 Ga0237816_00185 3300039145 Bacteria 5075
141 Ga0439463_002889 3300042016 Bacteria 4356
142 Ga0439464_0006954 3300042439 Bacteria 2954
143 Ga0466969_0004578 3300044656 Bacteria 7364
144 Ga0466969_0004865 3300044656 Bacteria 7153
145 Ga0466965_0001705 3300044683 Bacteria 9023
146 Ga0466966_0000648 3300044684 Bacteria 22118
147 Ga0466961_0003938 3300044693 Bacteria 9282
148 Ga0466961_0044216 3300044693 Bacteria 2850
149 Ga0466961_0138257 3300044693 Bacteria 1526
150 Ga0466963_0000943 3300044694 Bacteria 14883
151 Ga0466971_0000330 3300044719 Bacteria 18124
152 Ga0466968_0000065 3300044735 Bacteria 31445
153 Ga0466970_0028642 3300044765 Bacteria 2928
154 Ga0466970_0095124 3300044765 Bacteria 1619
155 Ga0466957_0000830 3300044842 Bacteria 15775
156 Ga0466960_0001081 3300044901 Bacteria 9785
157 Ga0466959_0013455 3300045049 Bacteria 5930
158 Ga0466959_0037191 3300045049 Bacteria 3596
159 Ga0466959_0038654 3300045049 Bacteria 3526
160 Ga0466958_0000068 3300045836 Bacteria 30629
161 Ga0466967_0016707 3300045976 Bacteria 5798
162 Ga0495650_0025309 3300046471 Bacteria 2785
163 Ga0495620_0042598 3300046515 Bacteria 1982
164 Ga0495667_0061392 3300046559 Bacteria 2464
165 Ga0495667_0125377 3300046559 Bacteria 1657
166 Ga0495669_0032648 3300046684 Bacteria 2289
167 Ga0495680_0191546 3300047322 Bacteria 1471
168 Ga0496101_0048426 3300048904 Bacteria 3055
169 Ga0496101_0154593 3300048904 Bacteria 1756
170 Ga0496102_0011942 3300048905 Bacteria 7500
171 Ga0496102_0033554 3300048905 Bacteria 4612
172 Ga0496103_0009709 3300048906 Bacteria 5696
173 Ga0496106_0002080 3300048909 Bacteria 14999
174 Ga0496106_0136606 3300048909 Bacteria 1926
175 Ga0496107_0103837 3300048910 Bacteria 2085
176 Ga0496108_0019796 3300048911 Bacteria 5529
177 Ga0496109_0029437 3300048912 Bacteria 4918
178 Ga0496109_0049603 3300048912 Bacteria 3822
179 Ga0496110_0012044 3300048913 Bacteria 7104
180 Ga0496110_0054194 3300048913 Bacteria 3527
181 Ga0496112_0168187 3300048915 Bacteria 2158
182 Ga0496113_0112535 3300048916 Bacteria 2120
183 Ga0496114_0018117 3300048917 Bacteria 5690
184 Ga0496118_0072426 3300048921 Bacteria 2475
185 Ga0496120_0097192 3300048923 Bacteria 1563
186 Ga0496126_0053745 3300048929 Bacteria 3652
187 Ga0501316_003659 3300049532 Bacteria 1507
188 Ga0501317_003834 3300049533 Bacteria 1528
189 Ga0501318_002845 3300049534 Bacteria 1537
190 Ga0501031_0000115 3300049568 Bacteria 43139
191 Ga0501032_0000052 3300049569 Bacteria 101001
192 Ga0501032_0001914 3300049569 Bacteria 16411
193 Ga0501033_0001762 3300049570 Bacteria 18926
194 Ga0501034_0003912 3300049571 Bacteria 16734
195 Ga0501034_0004192 3300049571 Bacteria 16093
196 Ga0501036_0004954 3300049572 Bacteria 10765
197 Ga0501037_0000046 3300049573 Bacteria 116524
198 Ga0501038_0000068 3300049574 Bacteria 84886
199 Ga0501039_0000362 3300049575 Bacteria 32461
200 Ga0501043_0000783 3300049579 Bacteria 28276
201 Ga0501046_0000102 3300049580 Bacteria 89938
202 Ga0501047_0005305 3300049581 Bacteria 12108
203 Ga0501048_0000006 3300049582 Bacteria 93252
204 Ga0501068_0013989 3300049584 Bacteria 4579
205 Ga0501069_0000146 3300049585 Bacteria 31605
206 Ga0501070_0002259 3300049586 Bacteria 16929
207 Ga0501073_0001270 3300049589 Bacteria 18521
208 Ga0501074_0000916 3300049590 Bacteria 18891
209 Ga0501076_0074947 3300049592 Bacteria 2712
210 Ga0501077_0021276 3300049593 Bacteria 4105
211 Ga0501080_0000051 3300049742 Bacteria 75804
212 Ga0501044_0000137 3300049823 Bacteria 89352
213 Ga0501044_0007591 3300049823 Bacteria 11921
214 nmdc:mga00v17_2633_c1 3300050491 Bacteria 9212
215 nmdc:mga05p37_37343_c1 3300050507 Bacteria 5956
216 nmdc:mga05p37_8041_c1 3300050507 Bacteria 5481
217 nmdc:mga09592_165529_c1 3300050508 Bacteria 1911
218 nmdc:mga09592_16768_c1 3300050508 Bacteria 5996
219 nmdc:mga0qj67_13751_c1 3300050509 Bacteria 6109
220 nmdc:mga06r32_21843_c1 3300050510 Bacteria 5910
221 nmdc:mga08y16_2301_c1 3300050511 Bacteria 19542
222 nmdc:mga0n895_2653_c1 3300050512 Bacteria 14112
223 nmdc:mga0rr50_13677_c1 3300050513 Bacteria 5295
224 nmdc:mga0rr50_2973_c1 3300050513 Bacteria 9693
225 nmdc:mga08x19_6664_c1 3300050514 Bacteria 6849
226 nmdc:mga0a205_10090_c1 3300050515 Bacteria 8667
227 nmdc:mga0a205_757_c1 3300050515 Bacteria 26054
228 Ga0500641_0057215 3300053096 Bacteria 1617
229 Ga0501084_0000567 3300054114 Bacteria 28265
230 Ga0587077_008448 3300059493 Bacteria 1534
231 Ga0466962_0005378 3300061719 Bacteria 6160
232 2559426833 2558860280 Bacteria 11429938
233 2644083106 2643221613 Bacteria 4622396
234 2644457536 2643221681 Bacteria 3707866
235 2644609392 2643221711 Bacteria 4865335
236 2644666121 2643221721 Bacteria 4486924
237 2729906015 2728369276 Bacteria 5610032
238 2753075348 2751185734 Bacteria 8863695
239 2776370209 2775506925 Bacteria 7237746
240 2795787442 2795385470 Bacteria 8317180
241 2795797157 2795385472 Bacteria 6627535
242 2812374607 2811994882 Bacteria 4688362
243 2816424982 2816332119 Bacteria 8120218
244 2819427202 2818991318 Bacteria 5266538
245 2819666227 2818991458 Bacteria 4794049
246 2819693065 2818991462 Bacteria 4320267
247 2819730300 2818991469 Bacteria 4644110
248 2835191367 2835188231 Bacteria 3476928
249 2839987814 2839986021 Bacteria 3685650
250 2857484370 2857481737 Bacteria 4761446
251 2863074177 2863067949 Bacteria 8541735
252 2866615813 2866612099 Bacteria 7543886
253 2870729278 2870721527 Bacteria 9689237
254 2887446366 2887443736 Bacteria 4426037
255 2923516631 2923516293 Bacteria 3716336
256 2932433067 2932431166 Bacteria 4215299
257 2935894636 2935890801 Bacteria 4593001
258 8047719973 8047710418 Bacteria 11023148
259 Ga0500559_0041611
260 LJQas_1003950
261 JGI24739J22299_10013999
262 JGI24739J22299_10025312
263 JGI24737J22298_10006828
264 JGI24737J22298_10011685
265 JGI24735J21928_10028460
266 JGI25152J39213_1000004
267 JGI25406J46586_10017444
268 Ga0006562J51391_1030144
269 Ga0070668_100064414
270 Ga0070714_100008321
271 Ga0070710_10001080
272 Ga0070662_100131854
273 Ga0070707_100023849
274 Ga0068855_100173552
275 Ga0068857_100140740
276 Ga0068852_100057570
277 Ga0068861_100010603
278 Ga0081455_10004084
279 Ga0081455_10036296
280 Ga0081455_10110284
281 Ga0081455_10140533
282 Ga0081538_10000025
283 Ga0081539_10000085
284 Ga0075364_10001747
285 Ga0075432_10000964
286 Ga0075432_10005778
287 Ga0075427_10006755
288 Ga0075428_100019851
289 Ga0075428_100081832
290 Ga0075430_100007049
291 Ga0075431_100002552
292 Ga0075431_100042234
293 Ga0075433_10000510
294 Ga0075433_10011478
295 Ga0075434_100000935
296 Ga0075434_100012079
297 Ga0075429_100018989
298 Ga0075429_100171079
299 Ga0075436_100000805
300 Ga0075435_100002900
301 Ga0075435_100018305
302 Ga0111539_10006590
303 Ga0114129_10004382
304 Ga0114129_10017120
305 Ga0114129_10035809
306 Ga0114129_10406630
307 Ga0105243_10021700
308 Ga0105243_10031022
309 Ga0105242_10007551
310 Ga0105238_10045984
311 Ga0105238_10149839
312 Ga0105249_10104071
313 Ga0105249_10114232
314 Ga0157370_10003107
315 Ga0157369_10018329
316 Ga0157378_10023640
317 Ga0157372_10017288
318 Ga0157372_10066395
319 Ga0197907_10301849
320 Ga0206351_10726834
321 Ga0206352_11345653
322 Ga0206350_11103853
323 Ga0154015_1286325
324 Ga0213875_10000060
325 Ga0213875_10002210
326 Ga0224712_10025790
327 Ga0207692_10015456
328 Ga0207684_10047665
329 Ga0207695_10023188
330 Ga0207695_10102955
331 Ga0207652_10221368
332 Ga0207646_10016173
333 Ga0207700_10093347
334 Ga0207664_10001481
335 Ga0207664_10065518
336 Ga0207664_10071332
337 Ga0207706_10040607
338 Ga0207686_10127815
339 Ga0207709_10045257
340 Ga0207661_10048211
341 Ga0207667_10075969
342 Ga0207668_10006203
343 Ga0207702_10054579
344 Ga0207675_100004165
345 Ga0207428_10000586
346 Ga0207428_10013611
347 Ga0307511_10003120
348 Ga0307512_10079582
349 Ga0316177_1027911
350 Ga0316176_1098856
351 Ga0314311_1033288
352 Ga0307509_10219416
353 Ga0307408_100115840
354 Ga0316579_10009979
355 Ga0316576_10000124
356 Ga0316576_10002976
357 Ga0316576_10017913
358 Ga0316576_10074020
359 Ga0316576_10128864
360 Ga0316578_10065148
361 Ga0307405_10034655
362 Ga0316577_10004924
363 Ga0316577_10093595
364 Ga0307413_10016240
365 Ga0307410_10010372
366 Ga0307410_10097179
367 Ga0307406_10011408
368 Ga0307412_10053220
369 Ga0307409_100000379
370 Ga0307409_100205140
371 Ga0307416_100000521
372 Ga0307416_100069518
373 Ga0307416_100133753
374 Ga0307416_100202647
375 Ga0307415_100003308
376 Ga0316583_10021720
377 Ga0307507_10000011
378 Ga0307507_10012011
379 Ga0316588_1015676
380 Ga0316587_1006556
381 Ga0373956_0001135
382 Ga0316574_0059816
383 Ga0373935_0000546
384 Ga0373927_0033817
385 Ga0373933_0122767
386 Ga0373947_0000001
387 Ga0316584_0002093
388 Ga0316584_0023329
389 Ga0316584_0031538
390 Ga0395899_0178533
391 Ga0395900_0078851
392 Ga0395900_0114480
393 Ga0395898_0044251
394 Ga0316581_0001105
395 Ga0436364_0061454
396 Ga0395901_0002330
397 Ga0395901_0009202
398 Ga0237816_00185
399 Ga0439463_002889
400 Ga0439464_0006954
401 Ga0466969_0004578
402 Ga0466969_0004865
403 Ga0466965_0001705
404 Ga0466966_0000648
405 Ga0466961_0003938
406 Ga0466961_0044216
407 Ga0466961_0138257
408 Ga0466963_0000943
409 Ga0466971_0000330
410 Ga0466968_0000065
411 Ga0466970_0028642
412 Ga0466970_0095124
413 Ga0466957_0000830
414 Ga0466960_0001081
415 Ga0466959_0013455
416 Ga0466959_0037191
417 Ga0466959_0038654
418 Ga0466958_0000068
419 Ga0466967_0016707
420 Ga0495650_0025309
421 Ga0495620_0042598
422 Ga0495667_0061392
423 Ga0495667_0125377
424 Ga0495669_0032648
425 Ga0495680_0191546
426 Ga0496101_0048426
427 Ga0496101_0154593
428 Ga0496102_0011942
429 Ga0496102_0033554
430 Ga0496103_0009709
431 Ga0496106_0002080
432 Ga0496106_0136606
433 Ga0496107_0103837
434 Ga0496108_0019796
435 Ga0496109_0029437
436 Ga0496109_0049603
437 Ga0496110_0012044
438 Ga0496110_0054194
439 Ga0496112_0168187
440 Ga0496113_0112535
441 Ga0496114_0018117
442 Ga0496118_0072426
443 Ga0496120_0097192
444 Ga0496126_0053745
445 Ga0501316_003659
446 Ga0501317_003834
447 Ga0501318_002845
448 Ga0501031_0000115
449 Ga0501032_0000052
450 Ga0501032_0001914
451 Ga0501033_0001762
452 Ga0501034_0003912
453 Ga0501034_0004192
454 Ga0501036_0004954
455 Ga0501037_0000046
456 Ga0501038_0000068
457 Ga0501039_0000362
458 Ga0501043_0000783
459 Ga0501046_0000102
460 Ga0501047_0005305
461 Ga0501048_0000006
462 Ga0501068_0013989
463 Ga0501069_0000146
464 Ga0501070_0002259
465 Ga0501073_0001270
466 Ga0501074_0000916
467 Ga0501076_0074947
468 Ga0501077_0021276
469 Ga0501080_0000051
470 Ga0501044_0000137
471 Ga0501044_0007591
472 nmdc:mga00v17_2633_c1
473 nmdc:mga05p37_37343_c1
474 nmdc:mga05p37_8041_c1
475 nmdc:mga09592_165529_c1
476 nmdc:mga09592_16768_c1
477 nmdc:mga0qj67_13751_c1
478 nmdc:mga06r32_21843_c1
479 nmdc:mga08y16_2301_c1
480 nmdc:mga0n895_2653_c1
481 nmdc:mga0rr50_13677_c1
482 nmdc:mga0rr50_2973_c1
483 nmdc:mga08x19_6664_c1
484 nmdc:mga0a205_10090_c1
485 nmdc:mga0a205_757_c1
486 Ga0500641_0057215
487 Ga0501084_0000567
488 Ga0587077_008448
489 Ga0466962_0005378
490 2559426833
491 2644083106
492 2644457536
493 2644609392
494 2644666121
495 2729906015
496 2753075348
497 2776370209
498 2795787442
499 2795797157
500 2812374607
501 2816424982
502 2819427202
503 2819666227
504 2819693065
505 2819730300
506 2835191367
507 2839987814
508 2857484370
509 2863074177
510 2866615813
511 2870729278
512 2887446366
513 2923516631
514 2932433067
515 2935894636
516 8047719973

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00120

Gln-synt_C

Glutamine synthetase, catalytic domain

157

524

0.99

PF03951

Gln-synt_N

Glutamine synthetase, beta-Grasp domain

69

150

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
8pvg-assembly1.cif.gz_A structure of e. coli glutamine synthetase determined by cryoem at 100 kev 0.9543 3 474
8pvg-assembly1.cif.gz_A structure of e. coli glutamine synthetase determined by cryoem at 100 kev 0.9521 3 474
7w85-assembly1.cif.gz_A structural of the filamentous escherichia coli glutamine synthetase 0.9513 3 474
7w85-assembly1.cif.gz_A structural of the filamentous escherichia coli glutamine synthetase 0.9492 3 474
3ng0-assembly1.cif.gz_A crystal structure of glutamine synthetase from synechocystis sp. pcc 6803 0.9349 3 474
ID Description Score Start End Superfamily
1lgrA02 Alpha Beta;Roll;Ubiquitin-like (UB roll);Glutamine synthetase, N-terminal domain 0.9616 4 106 3.10.20.70
1lgrA02 Alpha Beta;Roll;Ubiquitin-like (UB roll);Glutamine synthetase, N-terminal domain 0.952 4 106 3.10.20.70
4s17D01 Alpha Beta;Roll;Ubiquitin-like (UB roll);Glutamine synthetase, N-terminal domain 0.9504 6 106 3.10.20.70
3ng0A01 Alpha Beta;Roll;Ubiquitin-like (UB roll);Glutamine synthetase, N-terminal domain 0.9496 6 106 3.10.20.70
1htoA01 Alpha Beta;2-Layer Sandwich;Creatine Kinase; Chain A, domain 2;Glutamine synthetase/guanido kinase, catalytic domain 0.9236 107 462 3.30.590.10
ID Description Score Start End GO Terms
AF-A0A6A7MUA1-F1-model_v4 deleted 0.9844 1 110
AF-A0A3M9KL00-F1-model_v4 deleted 0.9773 14 119
AF-A0A376LFA4-F1-model_v4 Glutamine synthetase (EC 6.3.1.2) 0.9743 3 130 GO:0004356
GO:0005737
GO:0006542
GO:0016020
GO:0019740
AF-A0A836T1N0-F1-model_v4 deleted 0.9724 3 107
AF-A0A356KVF6-F1-model_v4 Glutamine synthetase (EC 6.3.1.2) 0.9719 268 449 GO:0004356
GO:0005737
GO:0006542
GO:0016020
GO:0019740

Map