F368522

General Info

Members Datasets Scaffolds Average Seq Length
259 152 518 186

Family's Representative Sequence

Representative Sequence 3300003320|rootH2_10299734|rootH2_102997342
Length 207
Sequence MKYSVDSLSPKLSDFLDRLLSHSGFELKYELTPGHSAHPEVENPEVTVSFRGTDTDLLLANRAELLLAIEHLSMEALHIPPEDHSLISFDANDYRLLRIEELRMSALAAAEKVKRTHVPFHFNPMTSRERRIIHLALRDEKELRSESLGVGSHRAVVIVPADMPTPPAPPVAPRPFNRGPREGAGDRDRPRRDHGRPPRRNGDRGRR

Samples

Sample ID Description Type Environment
1 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
2 3300004799 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
13 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
14 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
15 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
16 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
17 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
18 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
19 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
20 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
21 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
22 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
23 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
24 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
25 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
26 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
27 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
28 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
29 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
30 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
31 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
32 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
33 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
34 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
35 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
37 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
38 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
39 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
40 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
41 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
42 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
43 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
44 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
45 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
46 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
47 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
48 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
49 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
50 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
51 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
52 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
53 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
54 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
87 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
88 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
89 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
90 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
91 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
92 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
93 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
94 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
95 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
96 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
97 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
98 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
99 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
100 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
101 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
102 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
103 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
104 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
105 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
106 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
107 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
108 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
109 3300041441 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_1 MetaG Metagenome Rhizoplane
110 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
111 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
112 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
113 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
114 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
115 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
116 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
117 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
118 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
119 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
120 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
121 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
122 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
123 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
124 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
125 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
126 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
127 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
128 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
129 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
130 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
131 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
132 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
133 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
134 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
135 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
136 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
137 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
146 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
147 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
148 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
149 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
151 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
152 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.61
Metatranscriptomes 0.39
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.93
Rhizosphere 84.56
Stem 0
Stem Tuber 0
Unclassified 29.34

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10299734 3300003320 Bacteria 1866
2 Ga0058863_10046390 3300004799 Unclassified 821
3 Ga0070658_10198306 3300005327 Unclassified 1693
4 Ga0070676_10344110 3300005328 Bacteria 1023
5 Ga0070683_100069013 3300005329 Bacteria 3294
6 Ga0070680_100002550 3300005336 Bacteria 13472
7 Ga0070680_100037717 3300005336 Bacteria 3905
8 Ga0070682_100655568 3300005337 Bacteria 836
9 Ga0070660_100023746 3300005339 Bacteria 4544
10 Ga0070660_100116134 3300005339 Bacteria 2134
11 Ga0070661_100036975 3300005344 Bacteria 3551
12 Ga0070669_100440024 3300005353 Bacteria 1073
13 Ga0070675_100561590 3300005354 Unclassified 1033
14 Ga0070659_100044024 3300005366 Bacteria 3493
15 Ga0070709_10681391 3300005434 Bacteria 798
16 Ga0070714_100092128 3300005435 Bacteria 2656
17 Ga0070711_100265627 3300005439 Unclassified 1352
18 Ga0070663_100205217 3300005455 Unclassified 1540
19 Ga0070663_100213368 3300005455 Unclassified 1512
20 Ga0070681_10016775 3300005458 Bacteria 7312
21 Ga0070681_10332554 3300005458 Unclassified 1429
22 Ga0070681_10389291 3300005458 Bacteria 1305
23 Ga0070706_100170149 3300005467 Bacteria 2034
24 Ga0070679_100115102 3300005530 Bacteria 2675
25 Ga0070684_100040526 3300005535 Bacteria 4011
26 Ga0068853_100105414 3300005539 Bacteria 2497
27 Ga0070665_100614650 3300005548 Bacteria 1100
28 Ga0068855_100008342 3300005563 Bacteria 12525
29 Ga0068855_100019078 3300005563 Bacteria 8244
30 Ga0068855_100229800 3300005563 Bacteria 2078
31 Ga0068855_100310494 3300005563 Bacteria 1745
32 Ga0070664_100137197 3300005564 Bacteria 2152
33 Ga0070664_100173920 3300005564 Bacteria 1911
34 Ga0068856_100012367 3300005614 Bacteria 8267
35 Ga0068856_100058137 3300005614 Unclassified 3819
36 Ga0068856_100104727 3300005614 Bacteria 2823
37 Ga0068856_100162817 3300005614 Unclassified 2242
38 Ga0068852_100005922 3300005616 Bacteria 8792
39 Ga0068852_100262203 3300005616 Bacteria 1660
40 Ga0068859_100949339 3300005617 Bacteria 943
41 Ga0068864_100204250 3300005618 Bacteria 1816
42 Ga0068863_100247659 3300005841 Bacteria 1721
43 Ga0068858_100020585 3300005842 Bacteria 6163
44 Ga0081455_10028167 3300005937 Bacteria 5135
45 Ga0070712_100279553 3300006175 Bacteria 1344
46 Ga0068871_100170422 3300006358 Bacteria 1866
47 Ga0075434_100812194 3300006871 Unclassified 951
48 Ga0097620_100949411 3300006931 Bacteria 943
49 Ga0105240_10354595 3300009093 Bacteria 1663
50 Ga0105240_10383208 3300009093 Bacteria 1587
51 Ga0105241_10051275 3300009174 Bacteria 3146
52 Ga0105248_10033752 3300009177 Bacteria 5719
53 Ga0105248_10060509 3300009177 Unclassified 4252
54 Ga0105248_10707345 3300009177 Bacteria 1137
55 Ga0105237_10020196 3300009545 Bacteria 6875
56 Ga0105238_10043393 3300009551 Unclassified 4550
57 Ga0105238_10421829 3300009551 Bacteria 1329
58 Ga0105238_11087654 3300009551 Bacteria 822
59 Ga0105239_10123900 3300010375 Unclassified 2871
60 Ga0105239_10180481 3300010375 Unclassified 2362
61 Ga0157373_10351527 3300013100 Bacteria 1051
62 Ga0157370_10002040 3300013104 Bacteria 24804
63 Ga0157370_10094746 3300013104 Unclassified 2801
64 Ga0157370_10346408 3300013104 Bacteria 1369
65 Ga0157370_10603621 3300013104 Unclassified 1005
66 Ga0157369_10003554 3300013105 Bacteria 18513
67 Ga0157369_10009423 3300013105 Bacteria 11161
68 Ga0157369_10415442 3300013105 Unclassified 1395
69 Ga0157374_10093651 3300013296 Bacteria 2869
70 Ga0157374_10094063 3300013296 Bacteria 2863
71 Ga0157374_10479545 3300013296 Bacteria 1247
72 Ga0157378_10776257 3300013297 Bacteria 982
73 Ga0157375_10079364 3300013308 Bacteria 3317
74 Ga0157376_10055288 3300014969 Bacteria 3311
75 Ga0157376_10145400 3300014969 Bacteria 2132
76 Ga0157376_10362224 3300014969 Unclassified 1391
77 Ga0213873_10038655 3300021358 Unclassified 1220
78 Ga0213872_10000310 3300021361 Bacteria 41619
79 Ga0213874_10014077 3300021377 Bacteria 2085
80 Ga0213876_10007819 3300021384 Bacteria 5799
81 Ga0213876_10159461 3300021384 Bacteria 1200
82 Ga0213876_10174722 3300021384 Bacteria 1143
83 Ga0213875_10000002 3300021388 Bacteria 921066
84 Ga0213875_10000915 3300021388 Bacteria 21352
85 Ga0213875_10001963 3300021388 Bacteria 12725
86 Ga0213875_10032106 3300021388 Bacteria 2482
87 Ga0213875_10113561 3300021388 Bacteria 1265
88 Ga0207642_10060695 3300025899 Bacteria 1755
89 Ga0207645_10057319 3300025907 Bacteria 2487
90 Ga0207684_10409207 3300025910 Bacteria 1166
91 Ga0207654_10193424 3300025911 Bacteria 1335
92 Ga0207654_10232672 3300025911 Bacteria 1228
93 Ga0207654_10365437 3300025911 Unclassified 996
94 Ga0207707_10248938 3300025912 Bacteria 1544
95 Ga0207707_10350238 3300025912 Unclassified 1273
96 Ga0207707_10482722 3300025912 Unclassified 1058
97 Ga0207695_10153894 3300025913 Unclassified 2236
98 Ga0207695_10363777 3300025913 Unclassified 1333
99 Ga0207671_10044058 3300025914 Unclassified 3299
100 Ga0207660_10001241 3300025917 Bacteria 17080
101 Ga0207657_10023457 3300025919 Bacteria 5744
102 Ga0207657_10117774 3300025919 Bacteria 2187
103 Ga0207649_10382832 3300025920 Bacteria 1049
104 Ga0207694_10006407 3300025924 Bacteria 8968
105 Ga0207694_10036234 3300025924 Bacteria 3785
106 Ga0207687_10004189 3300025927 Bacteria 9659
107 Ga0207700_10209314 3300025928 Bacteria 1648
108 Ga0207700_10377541 3300025928 Unclassified 1239
109 Ga0207664_10450073 3300025929 Bacteria 1149
110 Ga0207665_11022117 3300025939 Bacteria 658
111 Ga0207711_10004165 3300025941 Bacteria 12381
112 Ga0207711_10080178 3300025941 Bacteria 2851
113 Ga0207711_10107275 3300025941 Bacteria 2479
114 Ga0207711_10132882 3300025941 Bacteria 2233
115 Ga0207689_10091371 3300025942 Bacteria 2501
116 Ga0207661_10202034 3300025944 Bacteria 1748
117 Ga0207679_10181892 3300025945 Bacteria 1740
118 Ga0207667_10190262 3300025949 Bacteria 2106
119 Ga0207667_10415882 3300025949 Unclassified 1368
120 Ga0207712_11025677 3300025961 Unclassified 733
121 Ga0207640_10044623 3300025981 Bacteria 2842
122 Ga0207703_10043761 3300026035 Unclassified 3595
123 Ga0207703_10658454 3300026035 Bacteria 994
124 Ga0207703_11410550 3300026035 Bacteria 670
125 Ga0207639_10032356 3300026041 Bacteria 3850
126 Ga0207639_10570122 3300026041 Unclassified 1041
127 Ga0207639_11190327 3300026041 Unclassified 715
128 Ga0207678_10019218 3300026067 Bacteria 5999
129 Ga0207702_10031163 3300026078 Unclassified 4444
130 Ga0207702_10038838 3300026078 Bacteria 3988
131 Ga0207702_10127435 3300026078 Unclassified 2287
132 Ga0207702_10485397 3300026078 Bacteria 1203
133 Ga0207641_10126658 3300026088 Bacteria 2287
134 Ga0207641_10153410 3300026088 Bacteria 2088
135 Ga0207648_10044570 3300026089 Bacteria 3891
136 Ga0207648_10543876 3300026089 Unclassified 1066
137 Ga0207648_10960403 3300026089 Bacteria 800
138 Ga0207676_10119355 3300026095 Bacteria 2221
139 Ga0207683_10084416 3300026121 Bacteria 2823
140 Ga0207683_10800118 3300026121 Unclassified 875
141 Ga0207698_10005750 3300026142 Bacteria 7693
142 Ga0268266_10538000 3300028379 Bacteria 1118
143 Ga0265323_10001673 3300028653 Bacteria 10615
144 Ga0265331_10032235 3300031250 Unclassified 2598
145 Ga0265316_10001468 3300031344 Bacteria 25274
146 Ga0265316_10194289 3300031344 Bacteria 1506
147 Ga0265316_10202331 3300031344 Unclassified 1471
148 Ga0307416_102466673 3300032002 Bacteria 619
149 Ga0373926_0017721 3300035083 Bacteria 2446
150 Ga0373945_0180118 3300035116 Bacteria 869
151 Ga0373953_0147075 3300035117 Bacteria 1009
152 Ga0373953_0181650 3300035117 Bacteria 908
153 Ga0373943_0107705 3300035170 Bacteria 1466
154 Ga0373946_0189364 3300035171 Bacteria 980
155 Ga0373955_0328744 3300035172 Unclassified 924
156 Ga0373935_0013403 3300035692 Unclassified 4946
157 Ga0373935_0015247 3300035692 Bacteria 4644
158 Ga0373935_0279551 3300035692 Bacteria 1175
159 Ga0373935_0572320 3300035692 Unclassified 825
160 Ga0373927_0000734 3300035695 Bacteria 24996
161 Ga0373947_0031082 3300035725 Unclassified 3140
162 Ga0373947_0201258 3300035725 Bacteria 1303
163 Ga0373937_0420918 3300036401 Unclassified 1268
164 Ga0373925_0002567 3300037068 Bacteria 14457
165 Ga0373925_0031997 3300037068 Unclassified 3870
166 Ga0373925_0042870 3300037068 Bacteria 3357
167 Ga0373925_0570705 3300037068 Bacteria 931
168 Ga0395899_0282860 3300037312 Unclassified 1128
169 Ga0395898_0203929 3300037466 Bacteria 1887
170 Ga0436364_0056406 3300037853 Bacteria 12221
171 Ga0436364_0060084 3300037853 Bacteria 1815
172 Ga0436364_0089722 3300037853 Unclassified 3172
173 Ga0436364_0164466 3300037853 Bacteria 1844
174 Ga0436364_0177242 3300037853 Bacteria 1208
175 Ga0436364_0270098 3300037853 Bacteria 68489
176 Ga0436364_0294364 3300037853 Bacteria 1692
177 Ga0436364_0414813 3300037853 Bacteria 101115
178 Ga0436364_0691571 3300037853 Bacteria 2805
179 Ga0436364_0894471 3300037853 Bacteria 1665
180 Ga0436364_0940248 3300037853 Bacteria 592364
181 Ga0436364_1153591 3300037853 Bacteria 1988
182 Ga0436364_1219326 3300037853 Unclassified 2039
183 Ga0436364_1223072 3300037853 Unclassified 706
184 Ga0436364_1533102 3300037853 Bacteria 9844
185 Ga0436365_0446382 3300039437 Bacteria 1366
186 Ga0436365_0781342 3300039437 Unclassified 3153
187 Ga0436365_1016855 3300039437 Bacteria 42338
188 Ga0436365_1035331 3300039437 Bacteria 1297
189 Ga0436365_1779343 3300039437 Unclassified 1200
190 Ga0436365_1858791 3300039437 Bacteria 5207
191 Ga0436360_0306135 3300039438 Bacteria 1772
192 Ga0436360_0325446 3300039438 Bacteria 2065
193 Ga0436361_0068788 3300039447 Bacteria 6251
194 Ga0436361_0454518 3300039447 Bacteria 30587
195 Ga0436363_0723725 3300039450 Bacteria 7798
196 Ga0436363_1240293 3300039450 Bacteria 1320
197 Ga0436363_1267707 3300039450 Bacteria 5437
198 Ga0436362_0308209 3300039453 Bacteria 848
199 Ga0436362_0464143 3300039453 Bacteria 9788
200 Ga0436362_0693295 3300039453 Unclassified 1250
201 Ga0436362_1115825 3300039453 Unclassified 1223
202 Ga0451787_057516 3300041441 Bacteria 760
203 Ga0466966_0058155 3300044684 Bacteria 2444
204 Ga0466967_0735439 3300045976 Unclassified 978
205 Ga0495651_0479192 3300046462 Bacteria 800
206 Ga0495651_0511777 3300046462 Unclassified 767
207 Ga0495580_0049130 3300046472 Unclassified 2985
208 Ga0495582_0313398 3300046473 Unclassified 902
209 Ga0495639_0024168 3300046475 Bacteria 2674
210 Ga0495594_0213571 3300046499 Unclassified 1100
211 Ga0495628_0164534 3300046516 Bacteria 1685
212 Ga0495665_0070760 3300046531 Bacteria 1838
213 Ga0495640_0098133 3300046533 Bacteria 1926
214 Ga0495586_0065631 3300046535 Bacteria 1979
215 Ga0495587_0137218 3300046536 Bacteria 1397
216 Ga0495645_0096832 3300046543 Unclassified 2102
217 Ga0495645_0430110 3300046543 Unclassified 836
218 Ga0495667_0071645 3300046559 Bacteria 2260
219 Ga0495667_0103035 3300046559 Bacteria 1846
220 Ga0495667_0316927 3300046559 Unclassified 987
221 Ga0495634_0137884 3300046642 Bacteria 1551
222 Ga0495635_0252045 3300046663 Unclassified 1190
223 Ga0495599_0341146 3300046678 Bacteria 899
224 Ga0495646_0140869 3300046680 Bacteria 1349
225 Ga0495674_0051000 3300047319 Unclassified 3649
226 Ga0495675_0177550 3300047444 Unclassified 1305
227 Ga0495675_0383403 3300047444 Unclassified 822
228 Ga0495684_0042571 3300047471 Bacteria 3478
229 Ga0495684_0369988 3300047471 Unclassified 1013
230 Ga0495602_0080943 3300048088 Bacteria 2733
231 Ga0495602_0081912 3300048088 Bacteria 2711
232 Ga0496108_0341726 3300048911 Unclassified 1306
233 Ga0496109_0354000 3300048912 Bacteria 1387
234 Ga0496112_0002293 3300048915 Bacteria 15312
235 Ga0496115_0007488 3300048918 Bacteria 8036
236 Ga0496126_0029359 3300048929 Bacteria 5224
237 Ga0501032_0225810 3300049569 Unclassified 1218
238 Ga0501032_0281651 3300049569 Unclassified 1076
239 Ga0501033_0142066 3300049570 Unclassified 1735
240 Ga0501034_0042005 3300049571 Unclassified 4627
241 Ga0501034_0259215 3300049571 Archaea 1682
242 Ga0501037_0043139 3300049573 Unclassified 3315
243 Ga0501038_0574325 3300049574 Unclassified 855
244 Ga0501041_0104854 3300049577 Bacteria 1752
245 Ga0501046_0107814 3300049580 Unclassified 2131
246 Ga0501047_0012575 3300049581 Bacteria 8017
247 Ga0501047_0363179 3300049581 Archaea 1283
248 Ga0501070_0003893 3300049586 Bacteria 12882
249 Ga0501070_0103395 3300049586 Unclassified 2356
250 Ga0501073_0170388 3300049589 Bacteria 1507
251 Ga0501074_0301688 3300049590 Bacteria 1137
252 Ga0501080_0833161 3300049742 Unclassified 807
253 Ga0501035_0008398 3300049822 Bacteria 9616
254 Ga0501035_0079848 3300049822 Unclassified 2889
255 Ga0501044_0001284 3300049823 Bacteria 29658
256 Ga0501044_0003397 3300049823 Bacteria 17937
257 Ga0501044_0022739 3300049823 Bacteria 6676
258 Ga0495601_0279254 3300053077 Unclassified 1089
259 Ga0466962_0082487 3300061719 Bacteria 1538
260 rootH2_10299734
261 Ga0058863_10046390
262 Ga0070658_10198306
263 Ga0070676_10344110
264 Ga0070683_100069013
265 Ga0070680_100002550
266 Ga0070680_100037717
267 Ga0070682_100655568
268 Ga0070660_100023746
269 Ga0070660_100116134
270 Ga0070661_100036975
271 Ga0070669_100440024
272 Ga0070675_100561590
273 Ga0070659_100044024
274 Ga0070709_10681391
275 Ga0070714_100092128
276 Ga0070711_100265627
277 Ga0070663_100205217
278 Ga0070663_100213368
279 Ga0070681_10016775
280 Ga0070681_10332554
281 Ga0070681_10389291
282 Ga0070706_100170149
283 Ga0070679_100115102
284 Ga0070684_100040526
285 Ga0068853_100105414
286 Ga0070665_100614650
287 Ga0068855_100008342
288 Ga0068855_100019078
289 Ga0068855_100229800
290 Ga0068855_100310494
291 Ga0070664_100137197
292 Ga0070664_100173920
293 Ga0068856_100012367
294 Ga0068856_100058137
295 Ga0068856_100104727
296 Ga0068856_100162817
297 Ga0068852_100005922
298 Ga0068852_100262203
299 Ga0068859_100949339
300 Ga0068864_100204250
301 Ga0068863_100247659
302 Ga0068858_100020585
303 Ga0081455_10028167
304 Ga0070712_100279553
305 Ga0068871_100170422
306 Ga0075434_100812194
307 Ga0097620_100949411
308 Ga0105240_10354595
309 Ga0105240_10383208
310 Ga0105241_10051275
311 Ga0105248_10033752
312 Ga0105248_10060509
313 Ga0105248_10707345
314 Ga0105237_10020196
315 Ga0105238_10043393
316 Ga0105238_10421829
317 Ga0105238_11087654
318 Ga0105239_10123900
319 Ga0105239_10180481
320 Ga0157373_10351527
321 Ga0157370_10002040
322 Ga0157370_10094746
323 Ga0157370_10346408
324 Ga0157370_10603621
325 Ga0157369_10003554
326 Ga0157369_10009423
327 Ga0157369_10415442
328 Ga0157374_10093651
329 Ga0157374_10094063
330 Ga0157374_10479545
331 Ga0157378_10776257
332 Ga0157375_10079364
333 Ga0157376_10055288
334 Ga0157376_10145400
335 Ga0157376_10362224
336 Ga0213873_10038655
337 Ga0213872_10000310
338 Ga0213874_10014077
339 Ga0213876_10007819
340 Ga0213876_10159461
341 Ga0213876_10174722
342 Ga0213875_10000002
343 Ga0213875_10000915
344 Ga0213875_10001963
345 Ga0213875_10032106
346 Ga0213875_10113561
347 Ga0207642_10060695
348 Ga0207645_10057319
349 Ga0207684_10409207
350 Ga0207654_10193424
351 Ga0207654_10232672
352 Ga0207654_10365437
353 Ga0207707_10248938
354 Ga0207707_10350238
355 Ga0207707_10482722
356 Ga0207695_10153894
357 Ga0207695_10363777
358 Ga0207671_10044058
359 Ga0207660_10001241
360 Ga0207657_10023457
361 Ga0207657_10117774
362 Ga0207649_10382832
363 Ga0207694_10006407
364 Ga0207694_10036234
365 Ga0207687_10004189
366 Ga0207700_10209314
367 Ga0207700_10377541
368 Ga0207664_10450073
369 Ga0207665_11022117
370 Ga0207711_10004165
371 Ga0207711_10080178
372 Ga0207711_10107275
373 Ga0207711_10132882
374 Ga0207689_10091371
375 Ga0207661_10202034
376 Ga0207679_10181892
377 Ga0207667_10190262
378 Ga0207667_10415882
379 Ga0207712_11025677
380 Ga0207640_10044623
381 Ga0207703_10043761
382 Ga0207703_10658454
383 Ga0207703_11410550
384 Ga0207639_10032356
385 Ga0207639_10570122
386 Ga0207639_11190327
387 Ga0207678_10019218
388 Ga0207702_10031163
389 Ga0207702_10038838
390 Ga0207702_10127435
391 Ga0207702_10485397
392 Ga0207641_10126658
393 Ga0207641_10153410
394 Ga0207648_10044570
395 Ga0207648_10543876
396 Ga0207648_10960403
397 Ga0207676_10119355
398 Ga0207683_10084416
399 Ga0207683_10800118
400 Ga0207698_10005750
401 Ga0268266_10538000
402 Ga0265323_10001673
403 Ga0265331_10032235
404 Ga0265316_10001468
405 Ga0265316_10194289
406 Ga0265316_10202331
407 Ga0307416_102466673
408 Ga0373926_0017721
409 Ga0373945_0180118
410 Ga0373953_0147075
411 Ga0373953_0181650
412 Ga0373943_0107705
413 Ga0373946_0189364
414 Ga0373955_0328744
415 Ga0373935_0013403
416 Ga0373935_0015247
417 Ga0373935_0279551
418 Ga0373935_0572320
419 Ga0373927_0000734
420 Ga0373947_0031082
421 Ga0373947_0201258
422 Ga0373937_0420918
423 Ga0373925_0002567
424 Ga0373925_0031997
425 Ga0373925_0042870
426 Ga0373925_0570705
427 Ga0395899_0282860
428 Ga0395898_0203929
429 Ga0436364_0056406
430 Ga0436364_0060084
431 Ga0436364_0089722
432 Ga0436364_0164466
433 Ga0436364_0177242
434 Ga0436364_0270098
435 Ga0436364_0294364
436 Ga0436364_0414813
437 Ga0436364_0691571
438 Ga0436364_0894471
439 Ga0436364_0940248
440 Ga0436364_1153591
441 Ga0436364_1219326
442 Ga0436364_1223072
443 Ga0436364_1533102
444 Ga0436365_0446382
445 Ga0436365_0781342
446 Ga0436365_1016855
447 Ga0436365_1035331
448 Ga0436365_1779343
449 Ga0436365_1858791
450 Ga0436360_0306135
451 Ga0436360_0325446
452 Ga0436361_0068788
453 Ga0436361_0454518
454 Ga0436363_0723725
455 Ga0436363_1240293
456 Ga0436363_1267707
457 Ga0436362_0308209
458 Ga0436362_0464143
459 Ga0436362_0693295
460 Ga0436362_1115825
461 Ga0451787_057516
462 Ga0466966_0058155
463 Ga0466967_0735439
464 Ga0495651_0479192
465 Ga0495651_0511777
466 Ga0495580_0049130
467 Ga0495582_0313398
468 Ga0495639_0024168
469 Ga0495594_0213571
470 Ga0495628_0164534
471 Ga0495665_0070760
472 Ga0495640_0098133
473 Ga0495586_0065631
474 Ga0495587_0137218
475 Ga0495645_0096832
476 Ga0495645_0430110
477 Ga0495667_0071645
478 Ga0495667_0103035
479 Ga0495667_0316927
480 Ga0495634_0137884
481 Ga0495635_0252045
482 Ga0495599_0341146
483 Ga0495646_0140869
484 Ga0495674_0051000
485 Ga0495675_0177550
486 Ga0495675_0383403
487 Ga0495684_0042571
488 Ga0495684_0369988
489 Ga0495602_0080943
490 Ga0495602_0081912
491 Ga0496108_0341726
492 Ga0496109_0354000
493 Ga0496112_0002293
494 Ga0496115_0007488
495 Ga0496126_0029359
496 Ga0501032_0225810
497 Ga0501032_0281651
498 Ga0501033_0142066
499 Ga0501034_0042005
500 Ga0501034_0259215
501 Ga0501037_0043139
502 Ga0501038_0574325
503 Ga0501041_0104854
504 Ga0501046_0107814
505 Ga0501047_0012575
506 Ga0501047_0363179
507 Ga0501070_0003893
508 Ga0501070_0103395
509 Ga0501073_0170388
510 Ga0501074_0301688
511 Ga0501080_0833161
512 Ga0501035_0008398
513 Ga0501035_0079848
514 Ga0501044_0001284
515 Ga0501044_0003397
516 Ga0501044_0022739
517 Ga0495601_0279254
518 Ga0466962_0082487

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01424

R3H

R3H domain

100

160

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
2a1s-assembly2.cif.gz_C crystal structure of native parn nuclease domain 0.8228 100 162
2fph-assembly1.cif.gz_X cell division protein ylmh from streptococcus pneumoniae 0.7897 100 166
2lrr-assembly1.cif.gz_A solution structure of the r3h domain from human smubp-2 in complex with 2'-deoxyguanosine-5'-monophosphate 0.7763 106 161
3gku-assembly1.cif.gz_B crystal structure of a probable rna-binding protein from clostridium symbiosum atcc 14940 0.774 8 160
3gku-assembly1.cif.gz_A crystal structure of a probable rna-binding protein from clostridium symbiosum atcc 14940 0.7172 8 163
ID Description Score Start End Superfamily
3gkuB03 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S8; Chain: A, domain 1;R3H-like domain 0.9668 94 160 3.30.1370.50
af_O53598_123_187_3.30.1370.50 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S8; Chain: A, domain 1;R3H-like domain 0.961 98 160 3.30.1370.50
3gkuB03 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S8; Chain: A, domain 1;R3H-like domain 0.9261 94 160 3.30.1370.50
af_O53598_123_187_3.30.1370.50 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S8; Chain: A, domain 1;R3H-like domain 0.9187 98 160 3.30.1370.50
af_A0A0R4IN15_23_108_3.30.1370.50 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S8; Chain: A, domain 1;R3H-like domain 0.8595 98 166 3.30.1370.50
ID Description Score Start End GO Terms
AF-A0A321L9J2-F1-model_v4 R3H domain-containing protein 0.9965 93 161 GO:0003723
AF-A0A7W1S8I1-F1-model_v4 Protein jag 0.9946 94 160 GO:0003723
AF-A0A6H9LAV8-F1-model_v4 R3H domain-containing protein 0.9865 99 160 GO:0003723
AF-A0A7Y2E7W5-F1-model_v4 Protein jag 0.9833 94 162 GO:0003723
AF-A0A661TX48-F1-model_v4 R3H domain-containing protein 0.9819 92 160 GO:0003723

Map