F368977

General Info

Members Datasets Scaffolds Average Seq Length
259 188 518 282

Family's Representative Sequence

Representative Sequence 3300039447|Ga0436361_0193139|Ga0436361_0193139_1570_2448
Length 292
Sequence MARITASVYTSHVPAIGAAMDLGKTQEDYWKPLFAGYDLSKQWMKDNKPDVVFLVYNDHATAFSLEMIPTFAIGTAAEFQPADEGWGPRPVPKVIGHPALASHIAQSVIQQDFDLTIVNKMDVDHGLTVPLSLMCGELDPKKDAWPCPVIPFAVNVVQYPVPSGQRCFALGQAIRKAVESFDEDLNVHIWGTGGMSHQLQGARAGLINREWDNAWLDQLINDPEACAKVPHIDYVREAGSEGIELVMWLIARGAMADVNGGRVTGPLPKVRHRFYHVPASNTAVGHAILENA

Samples

Sample ID Description Type Environment
1 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
4 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
6 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
7 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
8 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
11 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
12 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
13 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
14 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
15 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
16 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
17 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
18 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
19 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
20 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
21 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
22 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
23 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
24 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
25 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
26 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
27 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
28 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
29 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
30 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
31 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
32 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
33 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
34 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
36 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
37 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
38 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
39 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
40 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
41 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
42 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
43 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
44 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
45 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
46 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
48 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
50 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
51 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
52 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
53 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
54 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
55 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
56 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
57 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
58 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
59 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
60 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
61 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
62 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
63 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
64 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
65 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
66 3300015683 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_F04 Metagenome Rhizosphere
67 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
68 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
69 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
70 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
96 3300027462 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co PM (SPAdes) (version 2) Metagenome Rhizosphere
97 3300027552 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S AM (SPAdes) (version 2) Metagenome Rhizosphere
98 3300027614 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes) (version 2) Metagenome Rhizosphere
99 3300027617 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S AM (SPAdes) (version 2) Metagenome Rhizosphere
100 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
101 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
102 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
103 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
104 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
105 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
108 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
109 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
110 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
111 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
112 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
113 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
114 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
115 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
116 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
117 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
118 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
119 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
120 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
121 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
122 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
123 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
124 3300038727 Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 Metagenome Unclassified
125 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
126 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
127 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
128 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
129 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
130 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
131 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
132 3300042437 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z081617_5554 Metagenome Rhizosphere
133 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
134 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
135 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
136 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
137 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
138 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
139 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
140 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
141 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
142 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
143 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
144 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
145 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
146 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
147 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
148 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
149 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
150 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
151 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
152 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
153 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
156 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
157 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
158 3300049664 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_A_2_drought Metagenome Rhizosphere
159 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
160 3300049778 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I22_A_5_control Metagenome Rhizosphere
161 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
162 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
163 3300049853 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought Metagenome Rhizosphere
164 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
165 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
166 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
167 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
168 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
169 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
170 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
171 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
172 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
173 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
174 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
175 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
176 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
177 2574179768 Azoarcus communis DSM 12120 Isolate Unclassified
178 2643221570 Acidovorax sp. Root568 Isolate Unclassified
179 2643221596 Acidovorax sp. Root70 Isolate Unclassified
180 2643221652 Acidovorax sp. Root402 Isolate Unclassified
181 2721755523 Delftia sp. HK171 Isolate Unclassified
182 2738541337 Pelomonas sp. BT06 Isolate Unclassified
183 2839138175 Delftia acidovorans B15 Isolate Rhizosphere
184 2881101125 Ramlibacter rhizophilus CCTCC AB2015357 Isolate Rhizosphere
185 2904479285 Comamonas sediminis 4487 Isolate Rhizosphere
186 2919704043 Hydrogenophaga palleronii 4249 Isolate Unclassified
187 2928115317 Pseudacidovorax sp. 1753 Isolate Rhizosphere
188 2990710928 Acidovorax delafieldii SLBN-75 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 94.59
Metatranscriptomes 0
Isolates 5.41

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.02
Nodule 0.77
Rhizoplane 2.7
Rhizosphere 86.1
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0436361_0193139 3300039447 Bacteria 16854
2 SwRhRL2b_contig_279872 2162886007 Bacteria 1368
3 Ga0055531_10001335 3300003794 Bacteria 18427
4 Ga0065714_10087888 3300005288 Bacteria 2040
5 Ga0065704_10007718 3300005289 Bacteria 3336
6 Ga0065707_10015363 3300005295 Bacteria 2015
7 Ga0070658_10292688 3300005327 Bacteria 1388
8 Ga0070666_10097614 3300005335 Bacteria 2023
9 Ga0070680_100195554 3300005336 Bacteria 1705
10 Ga0070682_100240321 3300005337 Bacteria 1300
11 Ga0070660_100320066 3300005339 Bacteria 1274
12 Ga0070689_100127352 3300005340 Bacteria 2039
13 Ga0070668_100033275 3300005347 Bacteria 3924
14 Ga0070669_100115925 3300005353 Bacteria 2038
15 Ga0070671_100228752 3300005355 Bacteria 1578
16 Ga0070674_100021184 3300005356 Bacteria 4168
17 Ga0070673_100110866 3300005364 Bacteria 2275
18 Ga0070667_100021299 3300005367 Bacteria 5385
19 Ga0070667_100400721 3300005367 Bacteria 1249
20 Ga0070705_100072555 3300005440 Bacteria 2086
21 Ga0070700_100168670 3300005441 Bacteria 1514
22 Ga0070678_100059688 3300005456 Bacteria 2804
23 Ga0070662_100032685 3300005457 Bacteria 3657
24 Ga0068867_100011208 3300005459 Bacteria 6324
25 Ga0068867_100117432 3300005459 Bacteria 2051
26 Ga0070672_100037307 3300005543 Bacteria 3707
27 Ga0070704_100283745 3300005549 Bacteria 1373
28 Ga0068866_10016333 3300005718 Bacteria 3317
29 Ga0068866_10017422 3300005718 Bacteria 3231
30 Ga0068861_100138512 3300005719 Bacteria 1983
31 Ga0068870_10016152 3300005840 Bacteria 3561
32 Ga0068863_100075480 3300005841 Bacteria 3190
33 Ga0068863_100174504 3300005841 Bacteria 2062
34 Ga0068860_100216329 3300005843 Bacteria 1859
35 Ga0068862_100013059 3300005844 Bacteria 6871
36 Ga0068862_100064214 3300005844 Bacteria 3160
37 Ga0075365_10002903 3300006038 Bacteria 8643
38 Ga0075366_10006834 3300006195 Bacteria 6275
39 Ga0075366_10098707 3300006195 Bacteria 1752
40 Ga0097621_100028291 3300006237 Bacteria 4418
41 Ga0097621_100034751 3300006237 Bacteria 4023
42 Ga0097621_100110302 3300006237 Bacteria 2324
43 Ga0068871_100015140 3300006358 Bacteria 5766
44 Ga0068871_100202646 3300006358 Bacteria 1713
45 Ga0075428_100005334 3300006844 Bacteria 14293
46 Ga0075428_100157396 3300006844 Bacteria 2467
47 Ga0075428_100204096 3300006844 Bacteria 2136
48 Ga0075430_100133999 3300006846 Bacteria 2064
49 Ga0075430_100237233 3300006846 Bacteria 1511
50 Ga0075430_100296584 3300006846 Bacteria 1337
51 Ga0075431_100009471 3300006847 Bacteria 9778
52 Ga0075431_100254251 3300006847 Bacteria 1784
53 Ga0075431_100290680 3300006847 Bacteria 1653
54 Ga0075433_10003177 3300006852 Bacteria 12656
55 Ga0075433_10032292 3300006852 Bacteria 4484
56 Ga0075434_100000064 3300006871 Bacteria 54394
57 Ga0075429_100131567 3300006880 Bacteria 2189
58 Ga0075429_100152879 3300006880 Bacteria 2021
59 Ga0068865_100008534 3300006881 Bacteria 6333
60 Ga0068865_100292277 3300006881 Bacteria 1301
61 Ga0075436_100005135 3300006914 Bacteria 9013
62 Ga0075436_100125059 3300006914 Bacteria 1801
63 Ga0075435_100000586 3300007076 Bacteria 22266
64 Ga0075435_100018531 3300007076 Bacteria 5298
65 Ga0105250_10020172 3300009092 Bacteria 2695
66 Ga0111539_10042128 3300009094 Bacteria 5486
67 Ga0105245_10002702 3300009098 Bacteria 15962
68 Ga0114129_10008622 3300009147 Bacteria 14537
69 Ga0105243_10000631 3300009148 Bacteria 34959
70 Ga0105243_10130660 3300009148 Bacteria 2130
71 Ga0105242_10003476 3300009176 Bacteria 12246
72 Ga0105248_10274375 3300009177 Bacteria 1899
73 Ga0105248_10290594 3300009177 Bacteria 1841
74 Ga0105248_10340521 3300009177 Bacteria 1689
75 Ga0105248_10464169 3300009177 Bacteria 1427
76 Ga0105248_10953691 3300009177 Bacteria 969
77 Ga0105249_10003937 3300009553 Bacteria 12818
78 Ga0105249_10154665 3300009553 Bacteria 2211
79 Ga0105239_10757234 3300010375 Bacteria 1112
80 Ga0105246_10483131 3300011119 Bacteria 1048
81 Ga0157371_10173226 3300013102 Bacteria 1542
82 Ga0157378_10001488 3300013297 Bacteria 21162
83 Ga0163162_10030087 3300013306 Bacteria 5379
84 Ga0163162_10065362 3300013306 Bacteria 3684
85 Ga0163162_10243585 3300013306 Bacteria 1929
86 Ga0163162_11109498 3300013306 Bacteria 896
87 Ga0157375_10117196 3300013308 Bacteria 2768
88 Ga0157375_10212004 3300013308 Bacteria 2094
89 Ga0163163_10022097 3300014325 Bacteria 6017
90 Ga0157380_10160015 3300014326 Bacteria 1956
91 Ga0157380_10170394 3300014326 Bacteria 1902
92 Ga0157380_10324545 3300014326 Bacteria 1429
93 Ga0182008_10065188 3300014497 Bacteria 1792
94 Ga0157379_10238330 3300014968 Bacteria 1650
95 Ga0157376_10039268 3300014969 Bacteria 3859
96 Ga0157376_10171121 3300014969 Bacteria 1978
97 Ga0157376_10384018 3300014969 Bacteria 1354
98 Ga0182007_10025397 3300015262 Bacteria 2065
99 Ga0182005_1035264 3300015265 Bacteria 1361
100 Ga0183362_10002 3300015683 Bacteria 1432711
101 Ga0163161_10058744 3300017792 Bacteria 2796
102 Ga0209673_1033588 3300025273 Bacteria 1561
103 Ga0209130_1010519 3300025284 Bacteria 2542
104 Ga0209051_1000055 3300025303 Bacteria 277194
105 Ga0209257_1000101 3300025304 Bacteria 251553
106 Ga0207696_1020018 3300025711 Bacteria 2164
107 Ga0207682_10047492 3300025893 Bacteria 1768
108 Ga0207642_10036480 3300025899 Bacteria 2110
109 Ga0207642_10051719 3300025899 Bacteria 1860
110 Ga0207645_10013208 3300025907 Bacteria 5572
111 Ga0207643_10139242 3300025908 Bacteria 1448
112 Ga0207705_10292309 3300025909 Bacteria 1248
113 Ga0207705_10403873 3300025909 Bacteria 1057
114 Ga0207659_10030187 3300025926 Bacteria 3701
115 Ga0207644_10044892 3300025931 Bacteria 3142
116 Ga0207706_10000606 3300025933 Bacteria 38141
117 Ga0207709_10000131 3300025935 Bacteria 109649
118 Ga0207709_10000172 3300025935 Bacteria 86654
119 Ga0207670_10177199 3300025936 Bacteria 1603
120 Ga0207691_10002506 3300025940 Bacteria 17971
121 Ga0207691_10069508 3300025940 Bacteria 3181
122 Ga0207711_10276901 3300025941 Bacteria 1545
123 Ga0207711_10281384 3300025941 Bacteria 1532
124 Ga0207711_10292037 3300025941 Bacteria 1503
125 Ga0207689_10042855 3300025942 Bacteria 3742
126 Ga0207658_10035019 3300025986 Bacteria 3593
127 Ga0207658_10130427 3300025986 Bacteria 2019
128 Ga0207703_10020310 3300026035 Bacteria 5194
129 Ga0207639_10272586 3300026041 Bacteria 1485
130 Ga0207639_10320256 3300026041 Bacteria 1377
131 Ga0207708_10094077 3300026075 Bacteria 2313
132 Ga0207641_10206906 3300026088 Bacteria 1812
133 Ga0207648_10002321 3300026089 Bacteria 20531
134 Ga0207648_10016729 3300026089 Bacteria 6692
135 Ga0207676_10190755 3300026095 Bacteria 1803
136 Ga0207676_10241325 3300026095 Bacteria 1621
137 Ga0207675_100015598 3300026118 Bacteria 7087
138 Ga0207675_100037456 3300026118 Bacteria 4524
139 Ga0207683_10028651 3300026121 Bacteria 4817
140 Ga0207683_10090419 3300026121 Bacteria 2726
141 Ga0209281_1000020 3300027111 Bacteria 575972
142 Ga0209281_1000293 3300027111 Bacteria 91386
143 Ga0210000_1006411 3300027462 Bacteria 1713
144 Ga0209982_1000525 3300027552 Bacteria 4772
145 Ga0209970_1000463 3300027614 Bacteria 6935
146 Ga0210002_1000631 3300027617 Bacteria 4778
147 Ga0209983_1004273 3300027665 Bacteria 3011
148 Ga0209971_1003298 3300027682 Bacteria 3838
149 Ga0209998_10007325 3300027717 Bacteria 2290
150 Ga0209974_10005216 3300027876 Bacteria 4585
151 Ga0207428_10046915 3300027907 Bacteria 3471
152 Ga0207428_10130262 3300027907 Bacteria 1925
153 Ga0268266_10130299 3300028379 Bacteria 2249
154 Ga0268265_10008379 3300028380 Bacteria 6980
155 Ga0265336_10000003 3300028666 Bacteria 423158
156 Ga0307515_10366025 3300028794 Bacteria 1080
157 Ga0265324_10003293 3300029957 Bacteria 7760
158 Ga0265332_10018655 3300031238 Bacteria 3061
159 Ga0265327_10005550 3300031251 Bacteria 10474
160 Ga0316575_10025703 3300031665 Bacteria 2285
161 Ga0265314_10002116 3300031711 Bacteria 20849
162 Ga0265342_10127994 3300031712 Bacteria 1425
163 Ga0316576_10004360 3300031727 Bacteria 8474
164 Ga0316576_10015894 3300031727 Bacteria 5065
165 Ga0373960_0076928 3300035121 Bacteria 1043
166 Ga0316574_0115081 3300035398 Bacteria 1725
167 Ga0373931_0009297 3300035691 Bacteria 4694
168 Ga0395899_0011366 3300037312 Bacteria 6820
169 Ga0395900_0042196 3300037418 Bacteria 4699
170 Ga0395900_0045778 3300037418 Bacteria 4506
171 Ga0395898_0037745 3300037466 Bacteria 4790
172 Ga0395905_0006240 3300037471 Bacteria 12037
173 Ga0395905_0067841 3300037471 Bacteria 3341
174 Ga0395905_0095477 3300037471 Bacteria 2790
175 Ga0395905_0240290 3300037471 Bacteria 1693
176 Ga0395905_0306127 3300037471 Bacteria 1477
177 Ga0395901_0071636 3300038443 Bacteria 3612
178 Ga0395901_0075467 3300038443 Bacteria 3516
179 Ga0400491_27753 3300038727 Bacteria 2039
180 Ga0400483_021505 3300039062 Bacteria 13211
181 Ga0400483_046831 3300039062 Bacteria 362835
182 Ga0400483_095373 3300039062 Bacteria 2184
183 Ga0439465_0053915 3300041413 Bacteria 1322
184 Ga0451843_1574906 3300041509 Bacteria 769
185 Ga0439449_0003313 3300042007 Bacteria 6286
186 Ga0439462_0020911 3300042015 Bacteria 1708
187 Ga0450898_023541 3300042134 Bacteria 1096
188 Ga0439434_0051084 3300042435 Bacteria 1282
189 Ga0439444_0015532 3300042437 Bacteria 1287
190 Ga0451577_0000235 3300042876 Bacteria 109693
191 Ga0451577_0000863 3300042876 Bacteria 45151
192 Ga0451577_0193569 3300042876 Bacteria 1834
193 Ga0466969_0011838 3300044656 Bacteria 4613
194 Ga0466972_0064808 3300044658 Bacteria 1748
195 Ga0466966_0035156 3300044684 Bacteria 3239
196 Ga0453684_0000906 3300044712 Bacteria 98768
197 Ga0466959_0119539 3300045049 Bacteria 1875
198 Ga0451576_0084090 3300045051 Bacteria 3310
199 Ga0451576_0610451 3300045051 Bacteria 1146
200 Ga0495585_0163618 3300046492 Bacteria 1153
201 Ga0495596_0010570 3300046500 Bacteria 4013
202 Ga0495633_0057111 3300046558 Bacteria 1833
203 Ga0495668_0000018 3300046616 Bacteria 417480
204 Ga0495659_0022143 3300046664 Bacteria 2147
205 Ga0496100_0247263 3300048903 Bacteria 1318
206 Ga0496101_0192244 3300048904 Bacteria 1575
207 Ga0496102_0188903 3300048905 Bacteria 1941
208 Ga0496105_0066814 3300048908 Bacteria 2969
209 Ga0496110_0303095 3300048913 Bacteria 1455
210 Ga0496111_0176224 3300048914 Bacteria 1589
211 Ga0496114_0186339 3300048917 Bacteria 1814
212 Ga0495682_0006502 3300049460 Bacteria 4721
213 Ga0501043_0262140 3300049579 Bacteria 1329
214 Ga0501046_0089648 3300049580 Bacteria 2367
215 Ga0501047_0221044 3300049581 Bacteria 1750
216 Ga0501076_0072493 3300049592 Bacteria 2756
217 Ga0501223_015883 3300049663 Bacteria 1490
218 Ga0501224_000329 3300049664 Bacteria 5555
219 Ga0501080_0086016 3300049742 Bacteria 2921
220 Ga0501080_0244553 3300049742 Bacteria 1637
221 Ga0501282_000048 3300049778 Bacteria 15453
222 Ga0501035_0038030 3300049822 Bacteria 4357
223 Ga0501035_0191142 3300049822 Bacteria 1760
224 Ga0501035_0411478 3300049822 Bacteria 1124
225 Ga0501044_0000515 3300049823 Bacteria 47051
226 Ga0501226_004722 3300049853 Bacteria 1567
227 nmdc:mga0yw44_71390_c1 3300050492 Bacteria 2156
228 nmdc:mga0k408_106301_c1 3300050493 Bacteria 1658
229 nmdc:mga0k408_192280_c1 3300050493 Bacteria 1218
230 nmdc:mga05p37_344541_c1 3300050507 Bacteria 1756
231 nmdc:mga05p37_52613_c1 3300050507 Bacteria 5006
232 nmdc:mga09592_160790_c1 3300050508 Bacteria 1940
233 nmdc:mga09592_76368_c1 3300050508 Bacteria 2849
234 nmdc:mga0qj67_277338_c1 3300050509 Bacteria 1359
235 nmdc:mga06r32_16238_c1 3300050510 Bacteria 6781
236 nmdc:mga06r32_50376_c1 3300050510 Bacteria 3984
237 nmdc:mga08y16_47093_c1 3300050511 Bacteria 4514
238 nmdc:mga0n895_468_c1 3300050512 Bacteria 27132
239 nmdc:mga0rr50_145_c1 3300050513 Bacteria 39313
240 nmdc:mga08x19_215390_c1 3300050514 Bacteria 1319
241 nmdc:mga08x19_522_c1 3300050514 Bacteria 25573
242 nmdc:mga0a205_11596_c1 3300050515 Bacteria 8121
243 nmdc:mga0a205_85247_c1 3300050515 Bacteria 3051
244 Ga0500616_0153826 3300053153 Bacteria 1062
245 Ga0500637_0021629 3300053178 Bacteria 3495
246 2574433014 2574179768 Bacteria 4907129
247 2643864648 2643221570 Bacteria 5103772
248 2643992737 2643221596 Bacteria 5006805
249 2644296444 2643221652 Bacteria 5140275
250 2722883084 2721755523 Bacteria 6430384
251 2722883650 2721755523 Bacteria 6430384
252 2739053722 2738541337 Bacteria 6183410
253 2839138742 2839138175 Bacteria 6549354
254 2839141437 2839138175 Bacteria 6549354
255 2881105147 2881101125 Bacteria 4590519
256 2904482831 2904479285 Bacteria 5073931
257 2919705027 2919704043 Bacteria 5560311
258 2928117049 2928115317 Bacteria 6477646
259 2990715230 2990710928 Bacteria 5002431
260 Ga0436361_0193139
261 SwRhRL2b_contig_279872
262 Ga0055531_10001335
263 Ga0065714_10087888
264 Ga0065704_10007718
265 Ga0065707_10015363
266 Ga0070658_10292688
267 Ga0070666_10097614
268 Ga0070680_100195554
269 Ga0070682_100240321
270 Ga0070660_100320066
271 Ga0070689_100127352
272 Ga0070668_100033275
273 Ga0070669_100115925
274 Ga0070671_100228752
275 Ga0070674_100021184
276 Ga0070673_100110866
277 Ga0070667_100021299
278 Ga0070667_100400721
279 Ga0070705_100072555
280 Ga0070700_100168670
281 Ga0070678_100059688
282 Ga0070662_100032685
283 Ga0068867_100011208
284 Ga0068867_100117432
285 Ga0070672_100037307
286 Ga0070704_100283745
287 Ga0068866_10016333
288 Ga0068866_10017422
289 Ga0068861_100138512
290 Ga0068870_10016152
291 Ga0068863_100075480
292 Ga0068863_100174504
293 Ga0068860_100216329
294 Ga0068862_100013059
295 Ga0068862_100064214
296 Ga0075365_10002903
297 Ga0075366_10006834
298 Ga0075366_10098707
299 Ga0097621_100028291
300 Ga0097621_100034751
301 Ga0097621_100110302
302 Ga0068871_100015140
303 Ga0068871_100202646
304 Ga0075428_100005334
305 Ga0075428_100157396
306 Ga0075428_100204096
307 Ga0075430_100133999
308 Ga0075430_100237233
309 Ga0075430_100296584
310 Ga0075431_100009471
311 Ga0075431_100254251
312 Ga0075431_100290680
313 Ga0075433_10003177
314 Ga0075433_10032292
315 Ga0075434_100000064
316 Ga0075429_100131567
317 Ga0075429_100152879
318 Ga0068865_100008534
319 Ga0068865_100292277
320 Ga0075436_100005135
321 Ga0075436_100125059
322 Ga0075435_100000586
323 Ga0075435_100018531
324 Ga0105250_10020172
325 Ga0111539_10042128
326 Ga0105245_10002702
327 Ga0114129_10008622
328 Ga0105243_10000631
329 Ga0105243_10130660
330 Ga0105242_10003476
331 Ga0105248_10274375
332 Ga0105248_10290594
333 Ga0105248_10340521
334 Ga0105248_10464169
335 Ga0105248_10953691
336 Ga0105249_10003937
337 Ga0105249_10154665
338 Ga0105239_10757234
339 Ga0105246_10483131
340 Ga0157371_10173226
341 Ga0157378_10001488
342 Ga0163162_10030087
343 Ga0163162_10065362
344 Ga0163162_10243585
345 Ga0163162_11109498
346 Ga0157375_10117196
347 Ga0157375_10212004
348 Ga0163163_10022097
349 Ga0157380_10160015
350 Ga0157380_10170394
351 Ga0157380_10324545
352 Ga0182008_10065188
353 Ga0157379_10238330
354 Ga0157376_10039268
355 Ga0157376_10171121
356 Ga0157376_10384018
357 Ga0182007_10025397
358 Ga0182005_1035264
359 Ga0183362_10002
360 Ga0163161_10058744
361 Ga0209673_1033588
362 Ga0209130_1010519
363 Ga0209051_1000055
364 Ga0209257_1000101
365 Ga0207696_1020018
366 Ga0207682_10047492
367 Ga0207642_10036480
368 Ga0207642_10051719
369 Ga0207645_10013208
370 Ga0207643_10139242
371 Ga0207705_10292309
372 Ga0207705_10403873
373 Ga0207659_10030187
374 Ga0207644_10044892
375 Ga0207706_10000606
376 Ga0207709_10000131
377 Ga0207709_10000172
378 Ga0207670_10177199
379 Ga0207691_10002506
380 Ga0207691_10069508
381 Ga0207711_10276901
382 Ga0207711_10281384
383 Ga0207711_10292037
384 Ga0207689_10042855
385 Ga0207658_10035019
386 Ga0207658_10130427
387 Ga0207703_10020310
388 Ga0207639_10272586
389 Ga0207639_10320256
390 Ga0207708_10094077
391 Ga0207641_10206906
392 Ga0207648_10002321
393 Ga0207648_10016729
394 Ga0207676_10190755
395 Ga0207676_10241325
396 Ga0207675_100015598
397 Ga0207675_100037456
398 Ga0207683_10028651
399 Ga0207683_10090419
400 Ga0209281_1000020
401 Ga0209281_1000293
402 Ga0210000_1006411
403 Ga0209982_1000525
404 Ga0209970_1000463
405 Ga0210002_1000631
406 Ga0209983_1004273
407 Ga0209971_1003298
408 Ga0209998_10007325
409 Ga0209974_10005216
410 Ga0207428_10046915
411 Ga0207428_10130262
412 Ga0268266_10130299
413 Ga0268265_10008379
414 Ga0265336_10000003
415 Ga0307515_10366025
416 Ga0265324_10003293
417 Ga0265332_10018655
418 Ga0265327_10005550
419 Ga0316575_10025703
420 Ga0265314_10002116
421 Ga0265342_10127994
422 Ga0316576_10004360
423 Ga0316576_10015894
424 Ga0373960_0076928
425 Ga0316574_0115081
426 Ga0373931_0009297
427 Ga0395899_0011366
428 Ga0395900_0042196
429 Ga0395900_0045778
430 Ga0395898_0037745
431 Ga0395905_0006240
432 Ga0395905_0067841
433 Ga0395905_0095477
434 Ga0395905_0240290
435 Ga0395905_0306127
436 Ga0395901_0071636
437 Ga0395901_0075467
438 Ga0400491_27753
439 Ga0400483_021505
440 Ga0400483_046831
441 Ga0400483_095373
442 Ga0439465_0053915
443 Ga0451843_1574906
444 Ga0439449_0003313
445 Ga0439462_0020911
446 Ga0450898_023541
447 Ga0439434_0051084
448 Ga0439444_0015532
449 Ga0451577_0000235
450 Ga0451577_0000863
451 Ga0451577_0193569
452 Ga0466969_0011838
453 Ga0466972_0064808
454 Ga0466966_0035156
455 Ga0453684_0000906
456 Ga0466959_0119539
457 Ga0451576_0084090
458 Ga0451576_0610451
459 Ga0495585_0163618
460 Ga0495596_0010570
461 Ga0495633_0057111
462 Ga0495668_0000018
463 Ga0495659_0022143
464 Ga0496100_0247263
465 Ga0496101_0192244
466 Ga0496102_0188903
467 Ga0496105_0066814
468 Ga0496110_0303095
469 Ga0496111_0176224
470 Ga0496114_0186339
471 Ga0495682_0006502
472 Ga0501043_0262140
473 Ga0501046_0089648
474 Ga0501047_0221044
475 Ga0501076_0072493
476 Ga0501223_015883
477 Ga0501224_000329
478 Ga0501080_0086016
479 Ga0501080_0244553
480 Ga0501282_000048
481 Ga0501035_0038030
482 Ga0501035_0191142
483 Ga0501035_0411478
484 Ga0501044_0000515
485 Ga0501226_004722
486 nmdc:mga0yw44_71390_c1
487 nmdc:mga0k408_106301_c1
488 nmdc:mga0k408_192280_c1
489 nmdc:mga05p37_344541_c1
490 nmdc:mga05p37_52613_c1
491 nmdc:mga09592_160790_c1
492 nmdc:mga09592_76368_c1
493 nmdc:mga0qj67_277338_c1
494 nmdc:mga06r32_16238_c1
495 nmdc:mga06r32_50376_c1
496 nmdc:mga08y16_47093_c1
497 nmdc:mga0n895_468_c1
498 nmdc:mga0rr50_145_c1
499 nmdc:mga08x19_215390_c1
500 nmdc:mga08x19_522_c1
501 nmdc:mga0a205_11596_c1
502 nmdc:mga0a205_85247_c1
503 Ga0500616_0153826
504 Ga0500637_0021629
505 2574433014
506 2643864648
507 2643992737
508 2644296444
509 2722883084
510 2722883650
511 2739053722
512 2839138742
513 2839141437
514 2881105147
515 2904482831
516 2919705027
517 2928117049
518 2990715230

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02900

LigB

Catalytic LigB subunit of aromatic ring-opening dioxygenase

6

285

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
1bou-assembly1.cif.gz_D three-dimensional structure of ligab 0.9731 3 287
3wpm-assembly1.cif.gz_A crystal structure of the anaerobic desb-gallate complex by co-crystallization 0.9522 3 290
3wrb-assembly1.cif.gz_A crystal structure of the anaerobic h124f desb-gallate complex 0.9511 3 290
3wku-assembly1.cif.gz_B crystal structure of the anaerobic desb-gallate complex 0.95 3 290
3wrc-assembly1.cif.gz_A crystal structure of the anaerobic desb-protocatechuate (pca) complex 0.9461 3 290
ID Description Score Start End Superfamily
1bouB00 Alpha Beta;3-Layer(aba) Sandwich;Protocatechuate 4,5-dioxygenase; Chain B;LigB-like 0.9729 3 287 3.40.830.10
3wrcA01 Alpha Beta;3-Layer(aba) Sandwich;Protocatechuate 4,5-dioxygenase; Chain B;LigB-like 0.9461 3 290 3.40.830.10
1bouB00 Alpha Beta;3-Layer(aba) Sandwich;Protocatechuate 4,5-dioxygenase; Chain B;LigB-like 0.9266 3 287 3.40.830.10
af_P0ABR9_4_309_3.40.830.10 Alpha Beta;3-Layer(aba) Sandwich;Protocatechuate 4,5-dioxygenase; Chain B;LigB-like 0.8039 7 284 3.40.830.10
af_P0ABR9_4_309_3.40.830.10 Alpha Beta;3-Layer(aba) Sandwich;Protocatechuate 4,5-dioxygenase; Chain B;LigB-like 0.7699 7 284 3.40.830.10
ID Description Score Start End GO Terms
AF-A0A258WZS1-F1-model_v4 Protocatechuate 3,4-dioxygenase 0.9892 1 188 GO:0008198
GO:0051213
AF-A0A3D0WE34-F1-model_v4 Protocatechuate 3,4-dioxygenase 0.9873 1 199 GO:0008198
GO:0051213
AF-A0A4Q5W023-F1-model_v4 deleted 0.987 1 160
AF-A0A4Q3CLA5-F1-model_v4 Protocatechuate 3,4-dioxygenase 0.9855 1 130 GO:0008198
GO:0051213
AF-A0A3N5FJN9-F1-model_v4 Protocatechuate 3,4-dioxygenase 0.9839 1 115 GO:0008198
GO:0051213

Map