F369115

General Info

Members Datasets Scaffolds Average Seq Length
259 182 210 413

Family's Representative Sequence

Representative Sequence 3300049580|Ga0501046_0003986|Ga0501046_0003986_11459_12856
Length 451
Sequence MRQTTPTAVVPAKAGMAATRWLTRIRGPHDTMSNANPPSGPRYTGPGSPQDVPPLPGQTGIDPATMPEPIRKELEAPDPVAIDTASKELEDGVNRCPKCGSTEVRHKPGSDLLVCLYCRHQWQSERVEEQFGLGEGIDQLEGTVIASGARDIAADAKALMTFKCSGCGAEVTINTEGVNEQIANGAVPDAVLPFHIRKDDAVARIRQFVDKRRLFALKEFKEQFTPENVVGVYLPYMIIDANASADIRGQGEIETRRYTKGSGDNKKTYYDADVYRVERHVDFTVDDLPLESSSERGNLDTRRNTNNIINTILPFDTKNAVKWNASYLAGFTSEKRDRDVEALRPRLEDQLLSIARAQVEPSVKRYGRGVRWERERLDVRGTRWVSMYLPVWLYSYHQPGSNGGMLHYIAVNGRTGETMGSVPVQQWKLLATALTVGTVLESIVLWILAHS

Samples

Sample ID Description Type Environment
1 2537561836 Rhodanobacter spathiphylli B39 Isolate Unclassified
2 2576861471 Stenotrophomonas rhizophila DSM 14405 Isolate Rhizosphere
3 2643221562 Rhodanobacter sp. Root561 Isolate Unclassified
4 2643221573 Lysobacter sp. Root604 Isolate Unclassified
5 2643221576 Nocardioides sp. Root614 Isolate Unclassified
6 2643221579 Pseudoxanthomonas sp. Root630 Isolate Unclassified
7 2643221581 Pseudoxanthomonas sp. Root65 Isolate Unclassified
8 2643221586 Lysobacter sp. Root667 Isolate Unclassified
9 2643221590 Nocardioides sp. Root682 Isolate Unclassified
10 2643221612 Lysobacter sp. Root76 Isolate Unclassified
11 2643221617 Nocardioides sp. Root79 Isolate Unclassified
12 2643221620 Nocardioides sp. Root240 Isolate Unclassified
13 2643221641 Nocardioides sp. Root122 Isolate Unclassified
14 2643221720 Lysobacter sp. Root916 Isolate Unclassified
15 2643221727 Lysobacter sp. Root96 Isolate Unclassified
16 2643221728 Lysobacter sp. Root983 Isolate Unclassified
17 2739367898 Nocardioides sp. CF479 Isolate Unclassified
18 2747842428 Stenotrophomonas sp. WCS2014-113 Isolate Unclassified
19 2747842501 Xanthomonas sp. WCS2014-23 Isolate Unclassified
20 2765235840 Stenotrophomonas maltophilia AA1 Isolate Unclassified
21 2811994874 Nocardioides sp. SLBN-35 Isolate Unclassified
22 2816332141 Stenotrophomonas muris 1190 (v2) (version 2) Isolate Unclassified
23 2818991457 Xanthomonas translucens 569 Isolate Unclassified
24 2842391507 Stenotrophomonas maltophilia SEMIA 4027 Isolate Nodule
25 2842757796 Stenotrophomonas sp. R-72406 Isolate Unclassified
26 2842780639 Pseudoxanthomonas sp. R-71986 Isolate Unclassified
27 2852649853 Stenotrophomonas sp. JAI102 Isolate Rhizosphere
28 2852684882 Xanthomonas sp. JAI131 Isolate Rhizosphere
29 2857442823 Stenotrophomonas sp. R-74235 Isolate Unclassified
30 2919089067 Stenotrophomonas sp. 1337 Isolate Rhizosphere
31 2919130084 Xanthomonas sp. 1678 Isolate Rhizosphere
32 2919134579 Stenotrophomonas geniculata 1733 Isolate Rhizosphere
33 2919675420 Luteimonas terrae 4099 Isolate Unclassified
34 2919704043 Hydrogenophaga palleronii 4249 Isolate Unclassified
35 2923516293 Pseudoxanthomonas mexicana SLBN-89 Isolate Rhizosphere
36 2928496128 Stenotrophomonas indicatrix 1163 Isolate Unclassified
37 2929195423 Xanthomonas sp. R-73098 Hybrid assembly Isolate Unclassified
38 2931380184 Stenotrophomonas sp. DR822 Isolate Rhizosphere
39 2937610967 Stenotrophomonas maltophilia EP20 Isolate Unclassified
40 2939589442 Stenotrophomonas rhizophila 716 Isolate Rhizosphere
41 2939622612 Stenotrophomonas sp. 2619 Isolate Rhizosphere
42 2939626828 Stenotrophomonas sp. 2694 Isolate Rhizosphere
43 2941475908 Stenotrophomonas rhizophila 2680 Isolate Rhizosphere
44 2961047084 Stenotrophomonas maltophilia EP5 Isolate Unclassified
45 2961064222 Stenotrophomonas maltophilia EP13 Isolate Unclassified
46 2974307012 Stenotrophomonas sp. SORGH_AS_0282 Isolate Unclassified
47 2977247770 Stenotrophomonas rhizophila SORGH_AS 457 Isolate Unclassified
48 2984514374 Stenotrophomonas sp. SORGH_AS282 Isolate Aerial Root
49 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
50 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
51 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
52 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
53 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
54 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
55 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
56 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
57 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
58 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
59 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
60 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
61 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
62 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
63 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
64 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
65 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
66 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
67 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
68 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
69 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
70 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
71 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
72 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
73 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
74 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
75 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
76 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
77 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
78 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
79 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
80 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
81 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
82 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
83 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
84 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
85 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
86 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
87 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
88 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
89 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
90 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
104 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
106 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
107 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
108 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
109 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
110 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
111 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
112 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
113 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
114 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
115 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
116 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
117 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
118 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
119 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
120 3300039145 Coralloid root microbial communities from Jiquipilas, Chiapas, Mexico - JP6-T1 Metagenome Unclassified
121 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
122 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
123 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
124 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
125 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
126 3300042533 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0826F_E14_072516_1472 Metagenome Rhizosphere
127 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
128 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
129 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
130 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
131 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
132 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
133 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
134 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
135 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
136 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
137 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
138 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
139 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
140 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
141 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
142 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
143 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
144 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
145 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
146 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
147 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
148 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
149 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
150 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
151 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
152 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
153 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
154 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
156 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
157 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
158 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
159 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
161 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
162 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
163 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
164 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
165 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
166 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
167 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
168 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
169 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
170 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
171 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
172 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
173 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
174 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
175 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
176 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
177 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
178 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
179 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
180 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
181 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
182 8002869464 Pseudoxanthomonas helianthi 110414 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 81.08
Metatranscriptomes 0
Isolates 18.92

Biome Distribution

Category Percentage (%)
Aerial Root 0.39
Bulb 0
Endosphere 10.04
Nodule 0.39
Rhizoplane 0.77
Rhizosphere 58.3
Stem 0
Stem Tuber 0
Unclassified 30.12

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootL2_10088418 3300003322 Bacteria 2992
2 Ga0055526_1001799 3300003771 Bacteria 14848
3 Ga0055537_1001049 3300003773 Bacteria 12391
4 Ga0055534_1000030 3300003784 Bacteria 121396
5 Ga0055528_1001204 3300003790 Bacteria 16607
6 Ga0055530_10000021 3300003791 Bacteria 139383
7 Ga0055530_10000519 3300003791 Bacteria 33347
8 Ga0055531_10008677 3300003794 Bacteria 5315
9 Ga0058692_1000009 3300003856 Bacteria 349545
10 Ga0058692_1000134 3300003856 Bacteria 46732
11 Ga0070682_100049055 3300005337 Bacteria 2631
12 Ga0070667_100000399 3300005367 Bacteria 46943
13 Ga0070667_100009125 3300005367 Bacteria 8207
14 Ga0070663_100000256 3300005455 Bacteria 26565
15 Ga0070672_100007011 3300005543 Bacteria 7623
16 Ga0070665_100014381 3300005548 Bacteria 7941
17 Ga0070665_100105895 3300005548 Bacteria 2814
18 Ga0068855_100181319 3300005563 Bacteria 2380
19 Ga0068862_100172164 3300005844 Bacteria 1939
20 Ga0075364_10000148 3300006051 Bacteria 30892
21 Ga0075364_10031670 3300006051 Bacteria 3397
22 Ga0105240_10187345 3300009093 Bacteria 2436
23 Ga0105248_10000431 3300009177 Bacteria 47530
24 Ga0105248_10002139 3300009177 Bacteria 21869
25 Ga0105237_10002385 3300009545 Bacteria 23317
26 Ga0105249_10000222 3300009553 Bacteria 64888
27 Ga0105249_10058026 3300009553 Bacteria 3547
28 Ga0105239_10062783 3300010375 Bacteria 4077
29 Ga0105239_10074366 3300010375 Bacteria 3736
30 Ga0105239_10308509 3300010375 Bacteria 1783
31 Ga0157373_10046166 3300013100 Bacteria 3109
32 Ga0157373_10182520 3300013100 Bacteria 1478
33 Ga0157371_10000022 3300013102 Bacteria 295029
34 Ga0157370_10010784 3300013104 Bacteria 9609
35 Ga0157370_10035027 3300013104 Bacteria 4884
36 Ga0157370_10050781 3300013104 Bacteria 3963
37 Ga0157369_10020961 3300013105 Bacteria 7308
38 Ga0157378_10272946 3300013297 Bacteria 1627
39 Ga0157380_10171114 3300014326 Bacteria 1898
40 Ga0182008_10000013 3300014497 Bacteria 286492
41 Ga0182006_1012329 3300015261 Bacteria 3737
42 Ga0182007_10000004 3300015262 Bacteria 485875
43 Ga0182005_1000254 3300015265 Bacteria 34035
44 Ga0182005_1003798 3300015265 Bacteria 5019
45 Ga0163161_10019509 3300017792 Bacteria 4757
46 Ga0163161_10023531 3300017792 Bacteria 4346
47 Ga0163161_10108217 3300017792 Bacteria 2075
48 Ga0209565_1000024 3300025263 Bacteria 379907
49 Ga0209130_1008777 3300025284 Bacteria 2948
50 Ga0209675_1000107 3300025291 Bacteria 119593
51 Ga0209676_1000011 3300025292 Bacteria 860463
52 Ga0209676_1000086 3300025292 Bacteria 264155
53 Ga0209564_1000411 3300025295 Bacteria 75939
54 Ga0209050_1000032 3300025298 Bacteria 456335
55 Ga0209050_1000069 3300025298 Bacteria 297615
56 Ga0209050_1005267 3300025298 Bacteria 8234
57 Ga0209256_1002921 3300025299 Bacteria 12857
58 Ga0209051_1001778 3300025303 Bacteria 17100
59 Ga0209051_1033978 3300025303 Bacteria 1918
60 Ga0209257_1000014 3300025304 Bacteria 946850
61 Ga0209257_1000437 3300025304 Bacteria 80060
62 Ga0209257_1001874 3300025304 Bacteria 22775
63 Ga0207671_10009850 3300025914 Bacteria 7947
64 Ga0207709_10001938 3300025935 Bacteria 13603
65 Ga0207711_10047907 3300025941 Bacteria 3656
66 Ga0207712_10000248 3300025961 Bacteria 52803
67 Ga0207668_10041368 3300025972 Bacteria 3115
68 Ga0207658_10000006 3300025986 Bacteria 392309
69 Ga0207658_10092065 3300025986 Bacteria 2354
70 Ga0207639_10007853 3300026041 Bacteria 7288
71 Ga0207639_10058169 3300026041 Bacteria 2972
72 Ga0207639_10120564 3300026041 Bacteria 2154
73 Ga0207678_10000081 3300026067 Bacteria 77634
74 Ga0207708_10019907 3300026075 Bacteria 5059
75 Ga0207641_10253841 3300026088 Bacteria 1643
76 Ga0207648_10039188 3300026089 Bacteria 4167
77 Ga0207674_10025140 3300026116 Bacteria 6355
78 Ga0207675_100002481 3300026118 Bacteria 18263
79 Ga0209371_1000023 3300027312 Bacteria 519553
80 Ga0209371_1000287 3300027312 Bacteria 57449
81 Ga0268264_10037303 3300028381 Bacteria 4007
82 Ga0268256_1000023 3300030500 Bacteria 519631
83 Ga0268256_1000246 3300030500 Bacteria 57449
84 Ga0314311_1171381 3300030733 Bacteria 1851
85 Ga0316183_1065968 3300030742 Bacteria 7624
86 Ga0316181_1265711 3300030744 Bacteria 3997
87 Ga0307513_10002557 3300031456 Bacteria 25133
88 Ga0307509_10063378 3300031507 Bacteria 3892
89 Ga0316576_10078440 3300031727 Bacteria 2447
90 Ga0316578_10013229 3300031728 Bacteria 4370
91 Ga0307516_10030183 3300031730 Bacteria 5473
92 Ga0307410_10202384 3300031852 Bacteria 1517
93 Ga0307412_10000358 3300031911 Bacteria 28395
94 Ga0307416_100209579 3300032002 Bacteria 1858
95 Ga0307414_10010895 3300032004 Bacteria 5305
96 Ga0316574_0004766 3300035398 Bacteria 7164
97 Ga0316584_0011813 3300036712 Bacteria 6149
98 Ga0237816_00293 3300039145 Bacteria 4257
99 Ga0439436_0011145 3300041404 Bacteria 2732
100 Ga0439439_0003978 3300041406 Bacteria 3295
101 Ga0439465_0001620 3300041413 Bacteria 7331
102 Ga0451800_0149260 3300041459 Bacteria 2873
103 Ga0451807_1622007 3300041486 Bacteria 5259
104 Ga0450901_002746 3300042533 Bacteria 1867
105 Ga0466972_0000665 3300044658 Bacteria 16562
106 Ga0466965_0019075 3300044683 Bacteria 3293
107 Ga0466965_0032648 3300044683 Bacteria 2542
108 Ga0466970_0000643 3300044765 Bacteria 17196
109 Ga0466957_0068160 3300044842 Bacteria 2196
110 Ga0495627_009527 3300046453 Bacteria 3570
111 Ga0495627_024726 3300046453 Bacteria 1956
112 Ga0495590_0025633 3300046457 Bacteria 2072
113 Ga0495638_0000573 3300046460 Bacteria 41496
114 Ga0495607_0020633 3300046501 Bacteria 4160
115 Ga0495606_0022463 3300046507 Bacteria 4596
116 Ga0495631_0000128 3300046518 Bacteria 51035
117 Ga0495643_0000862 3300046522 Bacteria 32527
118 Ga0495663_0000576 3300046525 Bacteria 12894
119 Ga0495633_0000087 3300046558 Bacteria 124323
120 Ga0495633_0058346 3300046558 Bacteria 1812
121 Ga0495633_0063665 3300046558 Bacteria 1725
122 Ga0495668_0070267 3300046616 Bacteria 1925
123 Ga0495672_0000006 3300047320 Bacteria 589807
124 Ga0495686_0046161 3300047472 Bacteria 2755
125 Ga0496116_0000081 3300048919 Bacteria 224170
126 Ga0496116_0021650 3300048919 Bacteria 4841
127 Ga0496116_0040307 3300048919 Bacteria 3217
128 Ga0496117_0000065 3300048920 Bacteria 254215
129 Ga0496117_0000297 3300048920 Bacteria 87779
130 Ga0496117_0013144 3300048920 Bacteria 7244
131 Ga0496118_0000033 3300048921 Bacteria 326357
132 Ga0496118_0000056 3300048921 Bacteria 228660
133 Ga0496118_0001630 3300048921 Bacteria 33114
134 Ga0496118_0003565 3300048921 Bacteria 19417
135 Ga0496118_0019225 3300048921 Bacteria 6113
136 Ga0496118_0020785 3300048921 Bacteria 5809
137 Ga0496118_0065456 3300048921 Bacteria 2660
138 Ga0496119_0000632 3300048922 Bacteria 47533
139 Ga0496120_0000204 3300048923 Bacteria 101626
140 Ga0496121_0000823 3300048924 Bacteria 56560
141 Ga0496121_0070940 3300048924 Bacteria 2803
142 Ga0496122_0000621 3300048925 Bacteria 72688
143 Ga0496122_0000791 3300048925 Bacteria 60779
144 Ga0496122_0002115 3300048925 Bacteria 29377
145 Ga0496122_0011269 3300048925 Bacteria 9082
146 Ga0496123_0000325 3300048926 Bacteria 90905
147 Ga0496123_0000419 3300048926 Bacteria 77130
148 Ga0496123_0006449 3300048926 Bacteria 11360
149 Ga0496123_0035212 3300048926 Bacteria 3571
150 Ga0496124_0000006 3300048927 Bacteria 904259
151 Ga0496124_0000056 3300048927 Bacteria 250907
152 Ga0496124_0001188 3300048927 Bacteria 40613
153 Ga0496124_0006956 3300048927 Bacteria 12152
154 Ga0496124_0010437 3300048927 Bacteria 9400
155 Ga0496124_0012499 3300048927 Bacteria 8374
156 Ga0496124_0177910 3300048927 Bacteria 1640
157 Ga0496125_0000132 3300048928 Bacteria 162176
158 Ga0496125_0000395 3300048928 Bacteria 81224
159 Ga0496125_0001046 3300048928 Bacteria 42789
160 Ga0496125_0001680 3300048928 Bacteria 30949
161 Ga0496125_0059732 3300048928 Bacteria 3069
162 Ga0496126_0000201 3300048929 Bacteria 132938
163 Ga0501031_0041133 3300049568 Bacteria 3018
164 Ga0501032_0003943 3300049569 Bacteria 11262
165 Ga0501032_0048120 3300049569 Bacteria 2879
166 Ga0501034_0000083 3300049571 Bacteria 169656
167 Ga0501034_0000951 3300049571 Bacteria 41863
168 Ga0501034_0011572 3300049571 Bacteria 9137
169 Ga0501034_0042949 3300049571 Bacteria 4576
170 Ga0501034_0067195 3300049571 Bacteria 3598
171 Ga0501034_0204874 3300049571 Bacteria 1929
172 Ga0501036_0080108 3300049572 Bacteria 2761
173 Ga0501037_0002971 3300049573 Bacteria 12305
174 Ga0501038_0008537 3300049574 Bacteria 9410
175 Ga0501038_0044992 3300049574 Bacteria 3833
176 Ga0501039_0014963 3300049575 Bacteria 5933
177 Ga0501043_0023027 3300049579 Bacteria 4885
178 Ga0501043_0069518 3300049579 Bacteria 2766
179 Ga0501046_0003986 3300049580 Bacteria 13481
180 Ga0501046_0064198 3300049580 Bacteria 2867
181 Ga0501047_0009069 3300049581 Bacteria 9394
182 Ga0501047_0010584 3300049581 Bacteria 8723
183 Ga0501048_0086573 3300049582 Bacteria 2210
184 Ga0501067_0012556 3300049583 Bacteria 4700
185 Ga0501067_0023882 3300049583 Bacteria 3390
186 Ga0501068_0000399 3300049584 Bacteria 22024
187 Ga0501068_0065296 3300049584 Bacteria 2215
188 Ga0501069_0008571 3300049585 Bacteria 5377
189 Ga0501070_0050300 3300049586 Bacteria 3460
190 Ga0501070_0054306 3300049586 Bacteria 3322
191 Ga0501070_0096295 3300049586 Bacteria 2448
192 Ga0501071_0005612 3300049587 Bacteria 8086
193 Ga0501073_0073620 3300049589 Bacteria 2378
194 Ga0501074_0006140 3300049590 Bacteria 8678
195 Ga0501077_0002359 3300049593 Bacteria 11373
196 Ga0501079_0000342 3300049741 Bacteria 29539
197 Ga0501079_0042526 3300049741 Bacteria 3508
198 Ga0501080_0000180 3300049742 Bacteria 46199
199 Ga0501080_0002260 3300049742 Bacteria 16758
200 Ga0501080_0258955 3300049742 Bacteria 1585
201 Ga0501083_0004041 3300049744 Bacteria 10320
202 Ga0501083_0006958 3300049744 Bacteria 8024
203 Ga0501035_0005407 3300049822 Bacteria 12073
204 Ga0501035_0034938 3300049822 Bacteria 4566
205 Ga0501044_0000842 3300049823 Bacteria 36784
206 Ga0501044_0023090 3300049823 Bacteria 6621
207 nmdc:mga00v17_330_c1 3300050491 Bacteria 26662
208 Ga0500634_0000217 3300053161 Bacteria 18600
209 Ga0501084_0017612 3300054114 Bacteria 5944
210 Ga0466962_0189370 3300061719 Bacteria 1004

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300061719 Ga0466962_0189370 Ga0466962_0189370_15_992 323
2 3300014497 Ga0182008_10000013 Ga0182008_1000001391 367
3 3300046460 Ga0495638_0000573 Ga0495638_0000573_24405_25742 367
4 3300013104 Ga0157370_10010784 Ga0157370_100107842 369
5 3300017792 Ga0163161_10023531 Ga0163161_100235312 369
6 3300048920 Ga0496117_0000065 Ga0496117_0000065_137567_138904 369
7 3300048921 Ga0496118_0000033 Ga0496118_0000033_187454_188791 369
8 3300048924 Ga0496121_0000823 Ga0496121_0000823_42242_43579 369
9 3300048925 Ga0496122_0000621 Ga0496122_0000621_18487_19824 369
10 3300048926 Ga0496123_0006449 Ga0496123_0006449_5362_6699 369
11 3300048928 Ga0496125_0001046 Ga0496125_0001046_17655_18992 369
12 3300031727 Ga0316576_10078440 Ga0316576_100784402 370
13 3300031728 Ga0316578_10013229 Ga0316578_100132293 370
14 3300035398 Ga0316574_0004766 Ga0316574_0004766_2398_3633 370
15 3300036712 Ga0316584_0011813 Ga0316584_0011813_3887_5122 370
16 3300025298 Ga0209050_1005267 Ga0209050_10052676 372
17 3300005367 Ga0070667_100009125 Ga0070667_1000091253 373
18 3300009553 Ga0105249_10000222 Ga0105249_1000022244 376
19 3300010375 Ga0105239_10062783 Ga0105239_100627834 376
20 3300025961 Ga0207712_10000248 Ga0207712_1000024834 376
21 3300048925 Ga0496122_0011269 Ga0496122_0011269_7297_8613 376
22 3300048926 Ga0496123_0000325 Ga0496123_0000325_82302_83618 376
23 3300005367 Ga0070667_100000399 Ga0070667_1000003996 377
24 3300009545 Ga0105237_10002385 Ga0105237_1000238528 377
25 3300025914 Ga0207671_10009850 Ga0207671_100098504 377
26 3300025935 Ga0207709_10001938 Ga0207709_100019384 377
27 3300025986 Ga0207658_10000006 Ga0207658_1000000634 377
28 3300015265 Ga0182005_1003798 Ga0182005_10037982 382
29 3300003856 Ga0058692_1000134 Ga0058692_100013432 383
30 3300009093 Ga0105240_10187345 Ga0105240_101873453 383
31 3300026041 Ga0207639_10007853 Ga0207639_100078535 383
32 3300027312 Ga0209371_1000287 Ga0209371_100028734 383
33 3300030500 Ga0268256_1000246 Ga0268256_100024619 383
34 3300005455 Ga0070663_100000256 Ga0070663_10000025616 384
35 3300026067 Ga0207678_10000081 Ga0207678_1000008138 384
36 3300005548 Ga0070665_100105895 Ga0070665_1001058953 385
37 3300009177 Ga0105248_10000431 Ga0105248_100004316 386
38 3300026041 Ga0207639_10058169 Ga0207639_100581692 386
39 3300044658 Ga0466972_0000665 Ga0466972_0000665_14736_16043 386
40 3300017792 Ga0163161_10108217 Ga0163161_101082172 387
41 3300048929 Ga0496126_0000201 Ga0496126_0000201_124705_126051 387
42 3300003791 Ga0055530_10000021 Ga0055530_1000002127 388
43 3300025298 Ga0209050_1000069 Ga0209050_1000069150 388
44 3300025986 Ga0207658_10092065 Ga0207658_100920652 388
45 3300044683 Ga0466965_0032648 Ga0466965_0032648_63_1322 388
46 3300046558 Ga0495633_0063665 Ga0495633_0063665_146_1492 388
47 3300048925 Ga0496122_0002115 Ga0496122_0002115_12315_13652 389
48 3300048926 Ga0496123_0000419 Ga0496123_0000419_60038_61375 389
49 3300013100 Ga0157373_10182520 Ga0157373_101825202 390
50 3300013105 Ga0157369_10020961 Ga0157369_100209616 390
51 3300017792 Ga0163161_10019509 Ga0163161_100195092 390
52 3300031911 Ga0307412_10000358 Ga0307412_100003582 390
53 3300048919 Ga0496116_0000081 Ga0496116_0000081_153490_154839 390
54 3300048921 Ga0496118_0019225 Ga0496118_0019225_3194_4543 390
55 3300048927 Ga0496124_0010437 Ga0496124_0010437_1365_2702 390
56 3300013102 Ga0157371_10000022 Ga0157371_10000022138 391
57 3300015261 Ga0182006_1012329 Ga0182006_10123294 391
58 3300015262 Ga0182007_10000004 Ga0182007_10000004260 391
59 3300015265 Ga0182005_1000254 Ga0182005_100025424 391
60 3300048919 Ga0496116_0021650 Ga0496116_0021650_184_1530 391
61 3300048921 Ga0496118_0065456 Ga0496118_0065456_964_2310 391
62 3300048922 Ga0496119_0000632 Ga0496119_0000632_33866_35212 391
63 3300048923 Ga0496120_0000204 Ga0496120_0000204_88545_89891 391
64 3300048924 Ga0496121_0070940 Ga0496121_0070940_1370_2716 391
65 3300048927 Ga0496124_0006956 Ga0496124_0006956_256_1602 391
66 3300048928 Ga0496125_0000132 Ga0496125_0000132_80788_82134 391
67 3300048928 Ga0496125_0001680 Ga0496125_0001680_326_1672 391
68 3300005563 Ga0068855_100181319 Ga0068855_1001813192 392
69 3300009553 Ga0105249_10058026 Ga0105249_100580262 392
70 3300010375 Ga0105239_10074366 Ga0105239_100743663 392
71 3300026088 Ga0207641_10253841 Ga0207641_102538412 392
72 3300048921 Ga0496118_0020785 Ga0496118_0020785_4123_5460 392
73 3300048925 Ga0496122_0000791 Ga0496122_0000791_325_1671 392
74 3300048926 Ga0496123_0035212 Ga0496123_0035212_409_1755 392
75 3300048928 Ga0496125_0000395 Ga0496125_0000395_78268_79632 392
76 3300049580 Ga0501046_0064198 Ga0501046_0064198_1129_2427 393
77 3300049586 Ga0501070_0096295 Ga0501070_0096295_418_1716 393
78 3300048920 Ga0496117_0013144 Ga0496117_0013144_480_1787 394
79 3300044765 Ga0466970_0000643 Ga0466970_0000643_15383_16690 395
80 3300044683 Ga0466965_0019075 Ga0466965_0019075_224_1429 396
81 3300013297 Ga0157378_10272946 Ga0157378_102729462 397
82 3300046501 Ga0495607_0020633 Ga0495607_0020633_1976_3301 398
83 3300046558 Ga0495633_0058346 Ga0495633_0058346_38_1363 398
84 3300046507 Ga0495606_0022463 Ga0495606_0022463_2725_4050 399
85 3300046453 Ga0495627_009527 Ga0495627_009527_72_1319 401
86 3300049571 Ga0501034_0204874 Ga0501034_0204874_327_1673 401
87 3300005548 Ga0070665_100014381 Ga0070665_1000143818 402
88 3300025292 Ga0209676_1000086 Ga0209676_100008612 402
89 3300025303 Ga0209051_1033978 Ga0209051_10339781 402
90 3300025972 Ga0207668_10041368 Ga0207668_100413682 402
91 3300026041 Ga0207639_10120564 Ga0207639_101205642 402
92 3300026116 Ga0207674_10025140 Ga0207674_100251404 402
93 3300030742 Ga0316183_1065968 Ga0316183_10659686 402
94 3300049571 Ga0501034_0000083 Ga0501034_0000083_86571_87893 402
95 3300048921 Ga0496118_0001630 Ga0496118_0001630_3130_4443 403
96 3300005543 Ga0070672_100007011 Ga0070672_1000070113 404
97 iso_pu_bacteria 2643221617 2644102473 404
98 iso_pu_bacteria 2643221620 2644118136 404
99 iso_pu_bacteria 2811994874 2812333777 404
100 3300041486 Ga0451807_1622007 Ga0451807_1622007_3300_4616 405
101 3300030744 Ga0316181_1265711 Ga0316181_12657112 406
102 iso_pu_bacteria 2643221576 2643893098 406
103 iso_pu_bacteria 2643221590 2643961843 406
104 iso_pu_bacteria 2747842501 2748016314 406
105 3300003856 Ga0058692_1000009 Ga0058692_1000009224 407
106 3300006051 Ga0075364_10000148 Ga0075364_1000014829 407
107 3300013104 Ga0157370_10050781 Ga0157370_100507815 407
108 3300025304 Ga0209257_1000437 Ga0209257_100043738 407
109 3300027312 Ga0209371_1000023 Ga0209371_1000023221 407
110 3300030500 Ga0268256_1000023 Ga0268256_1000023219 407
111 3300041413 Ga0439465_0001620 Ga0439465_0001620_2598_3914 407
112 3300044842 Ga0466957_0068160 Ga0466957_0068160_925_2181 407
113 3300048920 Ga0496117_0000297 Ga0496117_0000297_20268_21614 407
114 3300048921 Ga0496118_0000056 Ga0496118_0000056_66155_67501 407
115 3300048927 Ga0496124_0177910 Ga0496124_0177910_41_1378 407
116 3300049568 Ga0501031_0041133 Ga0501031_0041133_349_1671 407
117 3300049571 Ga0501034_0067195 Ga0501034_0067195_1724_3046 407
118 3300049572 Ga0501036_0080108 Ga0501036_0080108_552_1874 407
119 3300049574 Ga0501038_0044992 Ga0501038_0044992_923_2245 407
120 3300049586 Ga0501070_0050300 Ga0501070_0050300_785_2107 407
121 3300049822 Ga0501035_0034938 Ga0501035_0034938_1543_2865 407
122 3300050491 nmdc:mga00v17_330_c1 nmdc:mga00v17_330_c1_22092_23408 407
123 3300003771 Ga0055526_1001799 Ga0055526_10017999 408
124 3300003773 Ga0055537_1001049 Ga0055537_10010495 408
125 3300003784 Ga0055534_1000030 Ga0055534_100003072 408
126 3300003790 Ga0055528_1001204 Ga0055528_100120412 408
127 3300003794 Ga0055531_10008677 Ga0055531_100086776 408
128 3300025263 Ga0209565_1000024 Ga0209565_1000024180 408
129 3300025284 Ga0209130_1008777 Ga0209130_10087773 408
130 3300025291 Ga0209675_1000107 Ga0209675_100010772 408
131 3300025295 Ga0209564_1000411 Ga0209564_100041153 408
132 3300025304 Ga0209257_1001874 Ga0209257_100187416 408
133 iso_pu_bacteria 2643221641 2644230458 408
134 iso_pu_bacteria 2739367898 2740168875 408
135 3300013104 Ga0157370_10035027 Ga0157370_100350275 409
136 3300046558 Ga0495633_0000087 Ga0495633_0000087_47879_49120 409
137 3300049571 Ga0501034_0011572 Ga0501034_0011572_704_1999 409
138 3300048927 Ga0496124_0001188 Ga0496124_0001188_19463_20737 410
139 3300048927 Ga0496124_0012499 Ga0496124_0012499_6638_7912 410
140 3300049571 Ga0501034_0042949 Ga0501034_0042949_2098_3408 410
141 3300049581 Ga0501047_0009069 Ga0501047_0009069_945_2243 410
142 3300049742 Ga0501080_0258955 Ga0501080_0258955_178_1476 410
143 3300003791 Ga0055530_10000519 Ga0055530_1000051915 411
144 3300006051 Ga0075364_10031670 Ga0075364_100316702 411
145 3300025292 Ga0209676_1000011 Ga0209676_1000011278 411
146 3300025298 Ga0209050_1000032 Ga0209050_1000032157 411
147 3300025303 Ga0209051_1001778 Ga0209051_100177811 411
148 3300025304 Ga0209257_1000014 Ga0209257_1000014337 411
149 3300031730 Ga0307516_10030183 Ga0307516_100301833 411
150 3300026075 Ga0207708_10019907 Ga0207708_100199073 412
151 3300026118 Ga0207675_100002481 Ga0207675_10000248118 412
152 3300041404 Ga0439436_0011145 Ga0439436_0011145_265_1578 412
153 3300041406 Ga0439439_0003978 Ga0439439_0003978_1424_2737 412
154 3300041459 Ga0451800_0149260 Ga0451800_0149260_31_1278 414
155 3300025299 Ga0209256_1002921 Ga0209256_10029215 415
156 3300039145 Ga0237816_00293 Ga0237816_00293_802_2118 415
157 3300046453 Ga0495627_024726 Ga0495627_024726_240_1586 415
158 3300049569 Ga0501032_0003943 Ga0501032_0003943_455_1759 415
159 3300049573 Ga0501037_0002971 Ga0501037_0002971_4917_6221 415
160 3300049574 Ga0501038_0008537 Ga0501038_0008537_4417_5721 415
161 3300049575 Ga0501039_0014963 Ga0501039_0014963_4513_5817 415
162 3300049579 Ga0501043_0023027 Ga0501043_0023027_3525_4829 415
163 3300049580 Ga0501046_0003986 Ga0501046_0003986_11459_12856 415
164 3300049582 Ga0501048_0086573 Ga0501048_0086573_379_1683 415
165 3300049589 Ga0501073_0073620 Ga0501073_0073620_438_1742 415
166 3300049822 Ga0501035_0005407 Ga0501035_0005407_3995_5299 415
167 3300049823 Ga0501044_0023090 Ga0501044_0023090_1637_2941 415
168 3300030733 Ga0314311_1171381 Ga0314311_11713813 416
169 3300046525 Ga0495663_0000576 Ga0495663_0000576_4722_6035 418
170 3300009177 Ga0105248_10002139 Ga0105248_1000213923 419
171 3300025941 Ga0207711_10047907 Ga0207711_100479075 419
172 3300032004 Ga0307414_10010895 Ga0307414_100108955 420
173 3300031456 Ga0307513_10002557 Ga0307513_1000255724 422
174 3300013100 Ga0157373_10046166 Ga0157373_100461664 423
175 3300046518 Ga0495631_0000128 Ga0495631_0000128_48910_50196 423
176 3300046522 Ga0495643_0000862 Ga0495643_0000862_626_1912 423
177 3300047320 Ga0495672_0000006 Ga0495672_0000006_215283_216569 423
178 3300047472 Ga0495686_0046161 Ga0495686_0046161_439_1725 423
179 3300048919 Ga0496116_0040307 Ga0496116_0040307_1521_2807 423
180 3300048921 Ga0496118_0003565 Ga0496118_0003565_17421_18707 423
181 3300048927 Ga0496124_0000056 Ga0496124_0000056_97863_99149 423
182 iso_pu_bacteria 2818991457 2819664035 423
183 iso_pu_bacteria 2929195423 2929197713 423
184 3300042533 Ga0450901_002746 Ga0450901_002746_520_1833 424
185 iso_pu_bacteria 2537561836 2538834470 425
186 iso_pu_bacteria 2643221562 2643830025 425
187 iso_pu_bacteria 2643221579 2643907955 425
188 iso_pu_bacteria 2923516293 2923518611 425
189 iso_pu_bacteria 2643221573 2643880495 426
190 iso_pu_bacteria 2643221720 2644661065 426
191 iso_pu_bacteria 2643221728 2644699146 426
192 iso_pu_bacteria 2842757796 2842758034 426
193 3300046457 Ga0495590_0025633 Ga0495590_0025633_457_1746 427
194 3300046616 Ga0495668_0070267 Ga0495668_0070267_410_1699 427
195 3300048928 Ga0496125_0059732 Ga0496125_0059732_1550_2848 427
196 iso_pu_bacteria 2576861471 2578458274 427
197 iso_pu_bacteria 2643221581 2643915841 427
198 iso_pu_bacteria 2643221586 2643937962 427
199 iso_pu_bacteria 2643221612 2644078880 427
200 iso_pu_bacteria 2643221727 2644693657 427
201 iso_pu_bacteria 2747842428 2747951570 427
202 iso_pu_bacteria 2765235840 2765579189 427
203 iso_pu_bacteria 2816332141 2816517260 427
204 iso_pu_bacteria 2842391507 2842392157 427
205 iso_pu_bacteria 2842780639 2842782867 427
206 iso_pu_bacteria 2852649853 2852650676 427
207 iso_pu_bacteria 2852684882 2852685812 427
208 iso_pu_bacteria 2919089067 2919089509 427
209 iso_pu_bacteria 2919130084 2919131919 427
210 iso_pu_bacteria 2919134579 2919135864 427
211 iso_pu_bacteria 2919675420 2919678785 427
212 iso_pu_bacteria 2919704043 2919708527 427
213 iso_pu_bacteria 2928496128 2928497326 427
214 iso_pu_bacteria 2931380184 2931380544 427
215 iso_pu_bacteria 2937610967 2937612706 427
216 iso_pu_bacteria 2939622612 2939626510 427
217 iso_pu_bacteria 2939626828 2939627127 427
218 iso_pu_bacteria 2941475908 2941475937 427
219 iso_pu_bacteria 2961047084 2961048627 427
220 iso_pu_bacteria 2961064222 2961067504 427
221 iso_pu_bacteria 8002869464 8002872310 427
222 3300005337 Ga0070682_100049055 Ga0070682_1000490553 428
223 3300010375 Ga0105239_10308509 Ga0105239_103085092 428
224 3300031852 Ga0307410_10202384 Ga0307410_102023842 428
225 3300032002 Ga0307416_100209579 Ga0307416_1002095791 428
226 3300053161 Ga0500634_0000217 Ga0500634_0000217_16775_18121 428
227 3300005844 Ga0068862_100172164 Ga0068862_1001721641 429
228 3300014326 Ga0157380_10171114 Ga0157380_101711142 429
229 3300026089 Ga0207648_10039188 Ga0207648_100391882 429
230 3300048927 Ga0496124_0000006 Ga0496124_0000006_26197_27522 429
231 3300003322 rootL2_10088418 rootL2_100884182 430
232 3300028381 Ga0268264_10037303 Ga0268264_100373034 430
233 3300031507 Ga0307509_10063378 Ga0307509_100633782 430
234 3300049569 Ga0501032_0048120 Ga0501032_0048120_854_2152 430
235 3300049571 Ga0501034_0000951 Ga0501034_0000951_36730_38028 430
236 3300049579 Ga0501043_0069518 Ga0501043_0069518_272_1570 430
237 3300049581 Ga0501047_0010584 Ga0501047_0010584_2386_3684 430
238 3300049583 Ga0501067_0012556 Ga0501067_0012556_2603_3901 430
239 3300049583 Ga0501067_0023882 Ga0501067_0023882_1910_3211 430
240 3300049584 Ga0501068_0000399 Ga0501068_0000399_16661_17962 430
241 3300049584 Ga0501068_0065296 Ga0501068_0065296_434_1732 430
242 3300049585 Ga0501069_0008571 Ga0501069_0008571_774_2072 430
243 3300049586 Ga0501070_0054306 Ga0501070_0054306_1562_2860 430
244 3300049587 Ga0501071_0005612 Ga0501071_0005612_554_1855 430
245 3300049590 Ga0501074_0006140 Ga0501074_0006140_4143_5444 430
246 3300049593 Ga0501077_0002359 Ga0501077_0002359_9469_10770 430
247 3300049741 Ga0501079_0000342 Ga0501079_0000342_26485_27786 430
248 3300049741 Ga0501079_0042526 Ga0501079_0042526_1481_2779 430
249 3300049742 Ga0501080_0000180 Ga0501080_0000180_34595_35896 430
250 3300049742 Ga0501080_0002260 Ga0501080_0002260_15169_16467 430
251 3300049744 Ga0501083_0004041 Ga0501083_0004041_5033_6331 430
252 3300049744 Ga0501083_0006958 Ga0501083_0006958_364_1665 430
253 3300049823 Ga0501044_0000842 Ga0501044_0000842_34709_36007 430
254 3300054114 Ga0501084_0017612 Ga0501084_0017612_3902_5203 430
255 iso_pu_bacteria 2857442823 2857443353 430
256 iso_pu_bacteria 2939589442 2939591699 430
257 iso_pu_bacteria 2974307012 2974308769 430
258 iso_pu_bacteria 2977247770 2977249497 430
259 iso_pu_bacteria 2984514374 2984516023 430

Structural Annotation

Top 5 Hits

ID Description Score Start End
6th6-assembly1.cif.gz_Ax cryo-em structure of t. kodakarensis 70s ribosome 0.7322 124 154
8hkx-assembly1.cif.gz_S27E cryo-em structures and translocation mechanism of crenarchaeota ribosome 0.7281 124 152
6gz5-assembly1.cif.gz_Bb trna translocation by the eukaryotic 80s ribosome and the impact of gtp hydrolysis, translocation-intermediate-post-3 (ti-post-3) 0.6766 123 155
6olg-assembly1.cif.gz_Bb human ribosome nascent chain complex stalled by a drug-like small molecule (cdh1_rnc with pp trna) 0.6725 121 155
5f0p-assembly1.cif.gz_C structure of retromer vps26-vps35 subunits bound to snx3 and dmt1(l557m) (semet labeled) 0.6434 229 258
ID Description Score Start End Superfamily
af_K7TJ84_334_404_2.30.30.380 Mainly Beta;Roll;SH3 type barrels.;Zn-finger domain of Sec23/24 0.6918 55 90 2.30.30.380
af_A0A0R4IWH1_21_63_3.30.160.60 Alpha Beta;2-Layer Sandwich;Double Stranded RNA Binding Domain;Classic Zinc Finger 0.6896 68 95 3.30.160.60
5f0mC00 Alpha Beta;2-Layer Sandwich;PX Domain;Phox-like domain 0.6393 229 258 3.30.1520.10
5adxL01 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;F-actin capping protein, alpha/beta subunit, N-terminal domain 0.6149 119 154 1.20.58.570
af_O94291_20_140_3.30.1520.10 Alpha Beta;2-Layer Sandwich;PX Domain;Phox-like domain 0.6069 227 263 3.30.1520.10
ID Description Score Start End GO Terms
AF-A0A5C7ZQ12-F1-model_v4 TFIIB-type zinc ribbon-containing protein 0.921 176 430 GO:0016020
AF-A0A5C7ZQ12-F1-model_v4 TFIIB-type zinc ribbon-containing protein 0.9142 176 430 GO:0016020
AF-A0A2G6HFH4-F1-model_v4 TFIIB-type zinc ribbon-containing protein 0.8899 55 430 GO:0016020
AF-M5D060-F1-model_v4 deleted 0.8868 42 430
AF-A0A2A3YLX3-F1-model_v4 TFIIB-type zinc ribbon-containing protein 0.877 56 425 GO:0016020

Feature Viewer

pLDDT pTM Quality
66.38 0.59 Medium
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Predicted Structure (AlphaFold2)

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