F369435

General Info

Members Datasets Scaffolds Average Seq Length
260 175 247 569

Family's Representative Sequence

Representative Sequence 3300005843|Ga0068860_100000082|Ga0068860_10000008237
Length 622
Sequence MYGDFPLRSPLSPSQTFAPFLEKGPGFTGISPPFTGLFGLLDLQPFAPILIFLILHPMEKTKRPPIFLALLSNGLNLALPKIIAAAIDAFGVHGRHLDMHDIIVKFMMVTSGVFMLSYLQSIVQTYASEKVARDLRTRLSEKISRQSYEFLQTTSPSKLLTNLTADVDSIKMFISQAIVSISSSLVIIVGASALLLSINWKLGLIVIAIIPIIGITFFIVLRKVRTLFLKAREVIDRLNKVINESILGAAIIRVINSQQQEYNKFLDANKNALGLGLSILRLFASLIPVIIFASNMASLAILAMGGRFVITGNMTLGNFSAFNNYLAMLIFPILIIGFMSNVIAQASASYARISGVLNAPDPVETGTLKAALKGDVAVKNVSVTYKDKTVLKDISFTVAAGSKTAIIGPTAAGKTQLLHLLTALTRPNTGAIVYDGHPIADYEKETLHKQIGFVFQDSIIFNMSIRENIAFNEAVTKEDMEKAIATAELHDFIASLPDKLDTVVSERGSSLSGGQKQRIMLARALAINPRVLLLDDFTARVDSSTEQKILENVRRNYPGITLLSVTQKIAPIEEYEQIILLMEGELIASGTHGELMNTCPEYVQIYQSQRSTSHYEQHELQS

Samples

Sample ID Description Type Environment
1 2522125168 Dyadobacter beijingensis DSM 21582 Isolate Rhizosphere
2 2738541283 Pedobacter sp. OK701 Isolate Unclassified
3 2738543023 Pedobacter sp. OK628 Isolate Unclassified
4 2818991460 Chitinophaga polysaccharea 1209 Isolate Unclassified
5 2821136567 Chitinophaga sancti 1232 Isolate Unclassified
6 2896109856 Chitinophaga sp. SYP-B3965 Isolate Rhizosphere
7 2904467357 Chitinophaga sancti 3198 Isolate Unclassified
8 2929177148 Chitinophaga sp. R-72269 Hybrid assembly Isolate Unclassified
9 2929239360 Chitinophaga sp. R-73072 Hybrid assembly Isolate Unclassified
10 2929921140 Chitinophaga sp. R-72609 Hybrid assembly Isolate Unclassified
11 2945977869 Chitinophaga sp. W2I13 Isolate Rhizosphere
12 2946013367 Chitinophaga sp. W3I9 Isolate Rhizosphere
13 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
14 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
15 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
16 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
17 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
18 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
19 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
20 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
21 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
22 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
23 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
24 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
25 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
26 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
27 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
28 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
29 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
30 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
31 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
32 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
33 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
34 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
35 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
36 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
37 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
38 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
39 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
40 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
41 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
42 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
43 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
44 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
45 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
46 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
47 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
48 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
49 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
50 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
51 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
52 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
53 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
54 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
55 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
56 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
57 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
58 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
59 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
60 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
61 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
62 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
63 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
64 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
65 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
66 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
67 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
68 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
69 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
70 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
71 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
72 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
73 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
74 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
75 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
76 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
77 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
78 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
79 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
80 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
81 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
82 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
83 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
84 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
85 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
86 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
87 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
88 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
89 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
90 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
91 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
92 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
93 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
94 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
95 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
96 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
97 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
128 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
130 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
131 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
132 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
133 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
134 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
135 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
136 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
137 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
138 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
139 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
140 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
141 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
142 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
143 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
144 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
145 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
146 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
147 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
148 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
149 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
150 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
151 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
152 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
153 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
154 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
155 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
156 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
157 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
158 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
159 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
160 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
161 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
162 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
163 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
164 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
165 3300049766 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_B_4_drought Metagenome Rhizosphere
166 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
167 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
168 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
169 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
170 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
171 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
172 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
173 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
174 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
175 8003151029 Chitinophaga sp. GbtcB8 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 95
Metatranscriptomes 0
Isolates 5

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 13.85
Nodule 0
Rhizoplane 0.38
Rhizosphere 76.92
Stem 0
Stem Tuber 0
Unclassified 8.85

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10010733 3300001979 Bacteria 3513
2 JGI24739J22299_10013236 3300001989 Unclassified 3015
3 JGI25154J39366_1000001 3300002738 Bacteria 483450
4 JGI25153J46596_10005319 3300003215 Bacteria 6768
5 rootH1_10054401 3300003316 Bacteria 3296
6 rootH2_10004603 3300003320 Bacteria 14289
7 rootH2_10024706 3300003320 Bacteria 21938
8 rootL2_10151976 3300003322 Bacteria 2537
9 JGI25160J50197_1002491 3300003354 Bacteria 8557
10 JGI25160J50197_1004747 3300003354 Bacteria 5809
11 JGI25160J50197_1005981 3300003354 Bacteria 4993
12 Ga0055535_1002335 3300003761 Bacteria 6868
13 Ga0055528_1000086 3300003790 Bacteria 73314
14 Ga0055530_10007768 3300003791 Bacteria 4443
15 Ga0055531_10000160 3300003794 Bacteria 77077
16 Ga0055543_1007717 3300004625 Bacteria 2456
17 Ga0065165_1000112 3300005262 Bacteria 135988
18 Ga0065165_1006155 3300005262 Bacteria 6412
19 Ga0065714_10002411 3300005288 Bacteria 34982
20 Ga0065714_10011487 3300005288 Bacteria 3908
21 Ga0065704_10070960 3300005289 Bacteria 14265
22 Ga0065704_10073991 3300005289 Bacteria 6613
23 Ga0070658_10004237 3300005327 Bacteria 11729
24 Ga0070683_100102663 3300005329 Bacteria 2693
25 Ga0068869_100079734 3300005334 Bacteria 2440
26 Ga0070666_10007852 3300005335 Bacteria 6592
27 Ga0070666_10087642 3300005335 Bacteria 2134
28 Ga0068868_100047280 3300005338 Unclassified 3371
29 Ga0070668_100025241 3300005347 Unclassified 4504
30 Ga0070668_100033998 3300005347 Bacteria 3885
31 Ga0070669_100022506 3300005353 Bacteria 4506
32 Ga0070674_100062842 3300005356 Bacteria 2596
33 Ga0070673_100025669 3300005364 Bacteria 4341
34 Ga0070659_100025139 3300005366 Bacteria 4572
35 Ga0070667_100000706 3300005367 Bacteria 32167
36 Ga0070667_100049441 3300005367 Bacteria 3541
37 Ga0070663_100063805 3300005455 Bacteria 2661
38 Ga0068867_100000738 3300005459 Bacteria 21923
39 Ga0070679_100034806 3300005530 Bacteria 4994
40 Ga0070684_100016235 3300005535 Bacteria 6082
41 Ga0068853_100000353 3300005539 Bacteria 31659
42 Ga0068853_100010548 3300005539 Bacteria 7471
43 Ga0068853_100034087 3300005539 Bacteria 4320
44 Ga0070672_100014643 3300005543 Bacteria 5563
45 Ga0070693_100032888 3300005547 Bacteria 2857
46 Ga0070665_100000031 3300005548 Bacteria 333365
47 Ga0070665_100015141 3300005548 Bacteria 7742
48 Ga0068855_100000108 3300005563 Bacteria 103059
49 Ga0068855_100049918 3300005563 Bacteria 4933
50 Ga0068855_100083386 3300005563 Unclassified 3703
51 Ga0068855_100203658 3300005563 Unclassified 2227
52 Ga0068856_100088888 3300005614 Bacteria 3072
53 Ga0068852_100040904 3300005616 Unclassified 3915
54 Ga0068864_100000893 3300005618 Bacteria 25102
55 Ga0068851_10000192 3300005834 Bacteria 30098
56 Ga0068863_100001423 3300005841 Bacteria 23703
57 Ga0068858_100005826 3300005842 Bacteria 12036
58 Ga0068860_100000082 3300005843 Bacteria 169805
59 Ga0068860_100002398 3300005843 Bacteria 19671
60 Ga0068862_100098592 3300005844 Bacteria 2553
61 Ga0081540_1024258 3300005983 Bacteria 3523
62 Ga0075366_10001924 3300006195 Bacteria 10504
63 Ga0097621_100002152 3300006237 Bacteria 13484
64 Ga0097621_100016666 3300006237 Bacteria 5562
65 Ga0068871_100062426 3300006358 Bacteria 3045
66 Ga0068871_100063309 3300006358 Unclassified 3025
67 Ga0068865_100000222 3300006881 Bacteria 31621
68 Ga0068865_100009022 3300006881 Bacteria 6168
69 Ga0105240_10000107 3300009093 Bacteria 171629
70 Ga0105240_10000180 3300009093 Bacteria 128683
71 Ga0105240_10000745 3300009093 Bacteria 59414
72 Ga0105240_10001977 3300009093 Bacteria 33873
73 Ga0105240_10005405 3300009093 Bacteria 19045
74 Ga0105240_10006389 3300009093 Bacteria 17337
75 Ga0105240_10011376 3300009093 Bacteria 12396
76 Ga0105243_10068998 3300009148 Unclassified 2850
77 Ga0105241_10049937 3300009174 Bacteria 3187
78 Ga0105242_10090417 3300009176 Bacteria 2575
79 Ga0105237_10001150 3300009545 Bacteria 35497
80 Ga0105237_10001527 3300009545 Bacteria 30353
81 Ga0105237_10002032 3300009545 Bacteria 25723
82 Ga0105237_10004736 3300009545 Bacteria 15648
83 Ga0105237_10008062 3300009545 Bacteria 11455
84 Ga0105237_10177195 3300009545 Bacteria 2132
85 Ga0105238_10021444 3300009551 Bacteria 6580
86 Ga0105238_10031367 3300009551 Bacteria 5410
87 Ga0105239_10000313 3300010375 Bacteria 71404
88 Ga0105239_10005024 3300010375 Bacteria 15617
89 Ga0105239_10089837 3300010375 Unclassified 3388
90 Ga0105239_10128693 3300010375 Bacteria 2815
91 Ga0105246_10030791 3300011119 Bacteria 3546
92 Ga0157373_10000377 3300013100 Bacteria 35725
93 Ga0157373_10038470 3300013100 Bacteria 3429
94 Ga0157371_10000141 3300013102 Bacteria 104396
95 Ga0157371_10002594 3300013102 Bacteria 17154
96 Ga0157371_10007827 3300013102 Bacteria 8580
97 Ga0157370_10001558 3300013104 Bacteria 28409
98 Ga0157370_10016249 3300013104 Bacteria 7541
99 Ga0157370_10072782 3300013104 Bacteria 3242
100 Ga0157370_10167665 3300013104 Bacteria 2042
101 Ga0157369_10000649 3300013105 Bacteria 44919
102 Ga0157374_10000002 3300013296 Bacteria 1054226
103 Ga0157374_10002153 3300013296 Bacteria 16592
104 Ga0157374_10116561 3300013296 Bacteria 2574
105 Ga0157378_10023116 3300013297 Bacteria 5470
106 Ga0157378_10041727 3300013297 Bacteria 4071
107 Ga0163162_10000096 3300013306 Bacteria 80090
108 Ga0163162_10000422 3300013306 Bacteria 39018
109 Ga0163162_10000774 3300013306 Bacteria 29743
110 Ga0157372_10000286 3300013307 Bacteria 56140
111 Ga0157372_10000851 3300013307 Bacteria 33164
112 Ga0157372_10001847 3300013307 Bacteria 22950
113 Ga0157372_10003994 3300013307 Bacteria 15830
114 Ga0157372_10037944 3300013307 Bacteria 5316
115 Ga0157375_10003178 3300013308 Bacteria 14275
116 Ga0163163_10001021 3300014325 Bacteria 23706
117 Ga0182008_10000008 3300014497 Bacteria 371823
118 Ga0182008_10000423 3300014497 Bacteria 32646
119 Ga0157379_10001680 3300014968 Bacteria 18291
120 Ga0157376_10000252 3300014969 Bacteria 37037
121 Ga0157376_10017990 3300014969 Bacteria 5407
122 Ga0157376_10022367 3300014969 Bacteria 4926
123 Ga0182006_1000091 3300015261 Bacteria 109227
124 Ga0182006_1002349 3300015261 Bacteria 10386
125 Ga0182006_1002796 3300015261 Bacteria 9314
126 Ga0182006_1003844 3300015261 Bacteria 7540
127 Ga0163161_10000681 3300017792 Bacteria 27156
128 Ga0209436_102229 3300025208 Bacteria 6018
129 Ga0209436_103110 3300025208 Bacteria 4565
130 Ga0209258_100156 3300025242 Bacteria 156926
131 Ga0209646_1000002 3300025246 Bacteria 1425781
132 Ga0209026_1000218 3300025250 Bacteria 79205
133 Ga0209148_1000378 3300025254 Bacteria 54132
134 Ga0209673_1000096 3300025273 Bacteria 194819
135 Ga0209130_1003283 3300025284 Bacteria 7044
136 Ga0209564_1002038 3300025295 Bacteria 17470
137 Ga0209758_1001153 3300025297 Bacteria 33831
138 Ga0209050_1025037 3300025298 Unclassified 2042
139 Ga0207426_1000040 3300025302 Bacteria 433920
140 Ga0207426_1000073 3300025302 Bacteria 323756
141 Ga0207426_1000502 3300025302 Bacteria 58023
142 Ga0207426_1008015 3300025302 Bacteria 4336
143 Ga0209257_1000013 3300025304 Bacteria 1047305
144 Ga0209257_1007578 3300025304 Bacteria 6507
145 Ga0207680_10007634 3300025903 Bacteria 5281
146 Ga0207680_10043585 3300025903 Unclassified 2632
147 Ga0207645_10002369 3300025907 Bacteria 14862
148 Ga0207645_10003768 3300025907 Bacteria 11387
149 Ga0207643_10004791 3300025908 Bacteria 7250
150 Ga0207705_10019895 3300025909 Unclassified 4802
151 Ga0207654_10019417 3300025911 Bacteria 3587
152 Ga0207707_10001079 3300025912 Bacteria 26123
153 Ga0207695_10000060 3300025913 Bacteria 360217
154 Ga0207695_10000077 3300025913 Bacteria 307107
155 Ga0207695_10000199 3300025913 Bacteria 166179
156 Ga0207695_10000833 3300025913 Bacteria 57159
157 Ga0207695_10011044 3300025913 Bacteria 10973
158 Ga0207671_10001156 3300025914 Bacteria 31490
159 Ga0207671_10001957 3300025914 Bacteria 22719
160 Ga0207671_10004949 3300025914 Bacteria 12498
161 Ga0207671_10012683 3300025914 Bacteria 6761
162 Ga0207660_10022076 3300025917 Bacteria 4285
163 Ga0207690_10005188 3300025932 Bacteria 7684
164 Ga0207686_10020698 3300025934 Bacteria 3763
165 Ga0207704_10038789 3300025938 Unclassified 2767
166 Ga0207691_10000057 3300025940 Bacteria 89823
167 Ga0207691_10013075 3300025940 Bacteria 7947
168 Ga0207689_10029193 3300025942 Unclassified 4608
169 Ga0207661_10020575 3300025944 Bacteria 4935
170 Ga0207667_10006394 3300025949 Bacteria 14281
171 Ga0207667_10068370 3300025949 Unclassified 3700
172 Ga0207651_10001225 3300025960 Bacteria 11514
173 Ga0207651_10086952 3300025960 Bacteria 2274
174 Ga0207668_10000170 3300025972 Bacteria 45140
175 Ga0207668_10028383 3300025972 Bacteria 3659
176 Ga0207668_10101020 3300025972 Bacteria 2143
177 Ga0207658_10003948 3300025986 Bacteria 10418
178 Ga0207658_10039147 3300025986 Bacteria 3420
179 Ga0207677_10023320 3300026023 Unclassified 3820
180 Ga0207703_10007504 3300026035 Bacteria 8656
181 Ga0207639_10004339 3300026041 Bacteria 9562
182 Ga0207678_10086087 3300026067 Bacteria 2686
183 Ga0207702_10069122 3300026078 Bacteria 3036
184 Ga0207641_10005909 3300026088 Bacteria 10382
185 Ga0207648_10001961 3300026089 Bacteria 22489
186 Ga0207648_10004329 3300026089 Bacteria 14622
187 Ga0207648_10179919 3300026089 Bacteria 1871
188 Ga0207676_10003844 3300026095 Bacteria 10606
189 Ga0207675_100100816 3300026118 Unclassified 2720
190 Ga0207683_10001520 3300026121 Bacteria 20897
191 Ga0207698_10055044 3300026142 Unclassified 3063
192 Ga0207698_10102153 3300026142 Bacteria 2379
193 Ga0268266_10000146 3300028379 Bacteria 135225
194 Ga0268266_10006731 3300028379 Bacteria 10481
195 Ga0268264_10000013 3300028381 Bacteria 513859
196 Ga0268264_10003357 3300028381 Bacteria 13839
197 Ga0268264_10020467 3300028381 Bacteria 5406
198 Ga0265326_10017955 3300028558 Bacteria 2038
199 Ga0316176_1057051 3300030732 Bacteria 34395
200 Ga0265330_10002783 3300031235 Bacteria 9387
201 Ga0265330_10006022 3300031235 Bacteria 6005
202 Ga0265329_10000006 3300031242 Bacteria 100215
203 Ga0265327_10000055 3300031251 Bacteria 247188
204 Ga0265316_10000009 3300031344 Bacteria 244484
205 Ga0307509_10083977 3300031507 Unclassified 3281
206 Ga0265313_10012612 3300031595 Bacteria 5143
207 Ga0265314_10008766 3300031711 Bacteria 8646
208 Ga0265342_10000070 3300031712 Bacteria 109443
209 Ga0316576_10092330 3300031727 Bacteria 2256
210 Ga0307516_10027294 3300031730 Bacteria 5789
211 Ga0307412_10000023 3300031911 Bacteria 237005
212 Ga0307414_10031643 3300032004 Bacteria 3473
213 Ga0307510_10005431 3300033180 Bacteria 15172
214 Ga0466961_0008447 3300044693 Bacteria 6558
215 Ga0453684_0001244 3300044712 Bacteria 77266
216 Ga0453684_0008991 3300044712 Bacteria 17647
217 Ga0453684_0011854 3300044712 Bacteria 14523
218 Ga0466970_0013486 3300044765 Bacteria 4190
219 Ga0495627_020653 3300046453 Unclassified 2192
220 Ga0495643_0000924 3300046522 Bacteria 30688
221 Ga0495648_0001906 3300046524 Bacteria 19916
222 Ga0495633_0001379 3300046558 Bacteria 18976
223 Ga0495668_0000423 3300046616 Bacteria 55097
224 Ga0495625_0067354 3300046660 Bacteria 2520
225 Ga0495636_0008341 3300047318 Bacteria 4092
226 Ga0495687_000010 3300047443 Bacteria 413735
227 Ga0495686_0000102 3300047472 Bacteria 177525
228 Ga0495686_0000322 3300047472 Bacteria 79695
229 Ga0496109_0121456 3300048912 Unclassified 2434
230 Ga0496121_0000043 3300048924 Bacteria 341882
231 Ga0496122_0000614 3300048925 Bacteria 73190
232 Ga0496123_0007541 3300048926 Bacteria 10203
233 Ga0496126_0036476 3300048929 Bacteria 4597
234 Ga0501047_0010802 3300049581 Bacteria 8631
235 Ga0501070_0009790 3300049586 Bacteria 8109
236 Ga0501074_0002077 3300049590 Bacteria 13842
237 Ga0501241_004456 3300049758 Bacteria 2624
238 Ga0501269_001386 3300049766 Bacteria 3176
239 nmdc:mga0k408_30533_c1 3300050493 Bacteria 3073
240 Ga0500644_0000292 3300053088 Bacteria 27065
241 Ga0500646_0001339 3300053090 Bacteria 6532
242 Ga0500651_0000084 3300053093 Bacteria 60127
243 Ga0500569_002241 3300053109 Bacteria 3781
244 Ga0500658_0012391 3300053134 Bacteria 3146
245 Ga0500577_0001320 3300053142 Bacteria 6346
246 Ga0500622_0000607 3300053156 Bacteria 32515
247 Ga0500627_0036711 3300053158 Bacteria 2088

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300049758 Ga0501241_004456 Ga0501241_004456_1044_2612 493
2 3300009148 Ga0105243_10068998 Ga0105243_100689982 504
3 3300044765 Ga0466970_0013486 Ga0466970_0013486_11_1555 510
4 3300046522 Ga0495643_0000924 Ga0495643_0000924_16558_18294 514
5 3300046660 Ga0495625_0067354 Ga0495625_0067354_295_2031 514
6 3300003316 rootH1_10054401 rootH1_100544012 515
7 3300013296 Ga0157374_10000002 Ga0157374_10000002621 526
8 3300014969 Ga0157376_10017990 Ga0157376_100179903 526
9 3300047443 Ga0495687_000010 Ga0495687_000010_231497_233245 527
10 3300015261 Ga0182006_1002796 Ga0182006_10027962 530
11 3300046524 Ga0495648_0001906 Ga0495648_0001906_15255_16937 531
12 3300053156 Ga0500622_0000607 Ga0500622_0000607_9277_10959 531
13 3300003354 JGI25160J50197_1005981 JGI25160J50197_10059812 533
14 3300025208 Ga0209436_103110 Ga0209436_1031102 533
15 3300025284 Ga0209130_1003283 Ga0209130_10032835 533
16 3300025302 Ga0207426_1000073 Ga0207426_1000073183 533
17 3300009545 Ga0105237_10008062 Ga0105237_100080626 537
18 3300047472 Ga0495686_0000322 Ga0495686_0000322_60771_62507 538
19 3300053158 Ga0500627_0036711 Ga0500627_0036711_122_1864 538
20 3300031727 Ga0316576_10092330 Ga0316576_100923302 539
21 3300009545 Ga0105237_10004736 Ga0105237_100047368 541
22 3300013104 Ga0157370_10167665 Ga0157370_101676652 543
23 3300015261 Ga0182006_1000091 Ga0182006_100009163 543
24 3300044712 Ga0453684_0008991 Ga0453684_0008991_7481_9223 543
25 3300005366 Ga0070659_100025139 Ga0070659_1000251391 544
26 3300005563 Ga0068855_100203658 Ga0068855_1002036582 544
27 3300013102 Ga0157371_10000141 Ga0157371_1000014196 544
28 3300013307 Ga0157372_10000851 Ga0157372_1000085120 544
29 3300013307 Ga0157372_10037944 Ga0157372_100379442 544
30 3300025932 Ga0207690_10005188 Ga0207690_100051881 544
31 3300048924 Ga0496121_0000043 Ga0496121_0000043_206332_208008 547
32 3300010375 Ga0105239_10000313 Ga0105239_100003138 548
33 3300003322 rootL2_10151976 rootL2_101519762 549
34 3300005288 Ga0065714_10011487 Ga0065714_100114872 549
35 3300005289 Ga0065704_10073991 Ga0065704_100739911 549
36 3300013100 Ga0157373_10000377 Ga0157373_1000037719 549
37 3300015261 Ga0182006_1003844 Ga0182006_10038445 549
38 3300031911 Ga0307412_10000023 Ga0307412_1000002341 549
39 3300032004 Ga0307414_10031643 Ga0307414_100316432 549
40 3300005327 Ga0070658_10004237 Ga0070658_100042373 550
41 3300005338 Ga0068868_100047280 Ga0068868_1000472803 550
42 3300005347 Ga0070668_100025241 Ga0070668_1000252413 550
43 3300005367 Ga0070667_100000706 Ga0070667_10000070628 550
44 3300005459 Ga0068867_100000738 Ga0068867_1000007381 550
45 3300005539 Ga0068853_100010548 Ga0068853_1000105482 550
46 3300005543 Ga0070672_100014643 Ga0070672_1000146433 550
47 3300005548 Ga0070665_100015141 Ga0070665_1000151413 550
48 3300005563 Ga0068855_100083386 Ga0068855_1000833861 550
49 3300005616 Ga0068852_100040904 Ga0068852_1000409043 550
50 3300005618 Ga0068864_100000893 Ga0068864_10000089316 550
51 3300005834 Ga0068851_10000192 Ga0068851_1000019212 550
52 3300005841 Ga0068863_100001423 Ga0068863_10000142318 550
53 3300005842 Ga0068858_100005826 Ga0068858_1000058266 550
54 3300005843 Ga0068860_100002398 Ga0068860_1000023984 550
55 3300006237 Ga0097621_100002152 Ga0097621_1000021522 550
56 3300006358 Ga0068871_100063309 Ga0068871_1000633092 550
57 3300006881 Ga0068865_100000222 Ga0068865_10000022226 550
58 3300009545 Ga0105237_10001527 Ga0105237_1000152712 550
59 3300013104 Ga0157370_10001558 Ga0157370_100015587 550
60 3300013296 Ga0157374_10002153 Ga0157374_1000215315 550
61 3300013297 Ga0157378_10023116 Ga0157378_100231164 550
62 3300013306 Ga0163162_10000096 Ga0163162_100000962 550
63 3300013308 Ga0157375_10003178 Ga0157375_100031783 550
64 3300014325 Ga0163163_10001021 Ga0163163_100010212 550
65 3300014497 Ga0182008_10000423 Ga0182008_100004236 550
66 3300014968 Ga0157379_10001680 Ga0157379_1000168017 550
67 3300014969 Ga0157376_10000252 Ga0157376_100002523 550
68 3300015261 Ga0182006_1002349 Ga0182006_10023492 550
69 3300017792 Ga0163161_10000681 Ga0163161_100006817 550
70 3300025903 Ga0207680_10043585 Ga0207680_100435852 550
71 3300025907 Ga0207645_10003768 Ga0207645_100037685 550
72 3300025909 Ga0207705_10019895 Ga0207705_100198953 550
73 3300025914 Ga0207671_10012683 Ga0207671_100126834 550
74 3300025938 Ga0207704_10038789 Ga0207704_100387893 550
75 3300025940 Ga0207691_10000057 Ga0207691_1000005764 550
76 3300025942 Ga0207689_10029193 Ga0207689_100291934 550
77 3300025949 Ga0207667_10068370 Ga0207667_100683701 550
78 3300025960 Ga0207651_10001225 Ga0207651_1000122511 550
79 3300025972 Ga0207668_10000170 Ga0207668_100001702 550
80 3300025986 Ga0207658_10003948 Ga0207658_100039482 550
81 3300026023 Ga0207677_10023320 Ga0207677_100233201 550
82 3300026035 Ga0207703_10007504 Ga0207703_100075043 550
83 3300026041 Ga0207639_10004339 Ga0207639_100043392 550
84 3300026088 Ga0207641_10005909 Ga0207641_100059092 550
85 3300026089 Ga0207648_10001961 Ga0207648_1000196115 550
86 3300026095 Ga0207676_10003844 Ga0207676_1000384412 550
87 3300026118 Ga0207675_100100816 Ga0207675_1001008161 550
88 3300026142 Ga0207698_10055044 Ga0207698_100550442 550
89 3300028379 Ga0268266_10006731 Ga0268266_1000673112 550
90 3300028381 Ga0268264_10020467 Ga0268264_100204676 550
91 3300047472 Ga0495686_0000102 Ga0495686_0000102_104877_106538 550
92 3300048912 Ga0496109_0121456 Ga0496109_0121456_123_1877 550
93 3300048925 Ga0496122_0000614 Ga0496122_0000614_1956_3692 550
94 3300048926 Ga0496123_0007541 Ga0496123_0007541_2223_3959 550
95 3300009093 Ga0105240_10001977 Ga0105240_1000197716 552
96 3300025913 Ga0207695_10011044 Ga0207695_100110442 552
97 3300013104 Ga0157370_10072782 Ga0157370_100727822 553
98 3300014497 Ga0182008_10000008 Ga0182008_10000008290 553
99 3300003354 JGI25160J50197_1004747 JGI25160J50197_10047472 556
100 3300025302 Ga0207426_1000040 Ga0207426_1000040178 556
101 3300005335 Ga0070666_10007852 Ga0070666_100078524 557
102 3300003794 Ga0055531_10000160 Ga0055531_1000016038 558
103 3300005289 Ga0065704_10070960 Ga0065704_100709602 558
104 3300025304 Ga0209257_1000013 Ga0209257_1000013807 558
105 3300048929 Ga0496126_0036476 Ga0496126_0036476_1690_3447 558
106 3300046453 Ga0495627_020653 Ga0495627_020653_102_1859 559
107 3300046558 Ga0495633_0001379 Ga0495633_0001379_1026_2783 559
108 3300049766 Ga0501269_001386 Ga0501269_001386_107_1846 559
109 3300046616 Ga0495668_0000423 Ga0495668_0000423_47790_49529 560
110 3300006237 Ga0097621_100016666 Ga0097621_1000166662 562
111 3300044693 Ga0466961_0008447 Ga0466961_0008447_1835_3589 562
112 3300005288 Ga0065714_10002411 Ga0065714_1000241113 564
113 3300013102 Ga0157371_10002594 Ga0157371_100025943 564
114 3300053090 Ga0500646_0001339 Ga0500646_0001339_2438_4165 564
115 3300053109 Ga0500569_002241 Ga0500569_002241_1845_3572 564
116 3300053134 Ga0500658_0012391 Ga0500658_0012391_1292_3019 564
117 3300053142 Ga0500577_0001320 Ga0500577_0001320_3251_4978 564
118 3300013102 Ga0157371_10007827 Ga0157371_100078275 566
119 3300030732 Ga0316176_1057051 Ga0316176_10570514 566
120 3300031251 Ga0265327_10000055 Ga0265327_10000055211 566
121 3300053093 Ga0500651_0000084 Ga0500651_0000084_129_1880 566
122 3300009093 Ga0105240_10006389 Ga0105240_1000638913 567
123 3300025903 Ga0207680_10007634 Ga0207680_100076342 567
124 3300005614 Ga0068856_100088888 Ga0068856_1000888882 569
125 3300009093 Ga0105240_10000745 Ga0105240_1000074517 569
126 3300009174 Ga0105241_10049937 Ga0105241_100499372 569
127 3300009551 Ga0105238_10031367 Ga0105238_100313673 569
128 3300025911 Ga0207654_10019417 Ga0207654_100194172 569
129 3300025913 Ga0207695_10000833 Ga0207695_100008337 569
130 3300025914 Ga0207671_10004949 Ga0207671_100049496 569
131 3300026078 Ga0207702_10069122 Ga0207702_100691223 569
132 3300049581 Ga0501047_0010802 Ga0501047_0010802_5992_7758 569
133 3300013296 Ga0157374_10116561 Ga0157374_101165612 571
134 3300031235 Ga0265330_10002783 Ga0265330_100027839 571
135 3300031235 Ga0265330_10006022 Ga0265330_100060223 571
136 3300031242 Ga0265329_10000006 Ga0265329_1000000690 571
137 3300031344 Ga0265316_10000009 Ga0265316_10000009146 571
138 3300031712 Ga0265342_10000070 Ga0265342_1000007015 571
139 iso_pu_bacteria 2738541283 2738757518 571
140 3300005563 Ga0068855_100049918 Ga0068855_1000499184 572
141 iso_pu_bacteria 2522125168 2522548690 572
142 3300005455 Ga0070663_100063805 Ga0070663_1000638052 573
143 3300013307 Ga0157372_10000286 Ga0157372_1000028628 573
144 3300026067 Ga0207678_10086087 Ga0207678_100860872 573
145 3300053088 Ga0500644_0000292 Ga0500644_0000292_19906_21735 573
146 iso_pu_bacteria 2738543023 2739305458 573
147 3300003761 Ga0055535_1002335 Ga0055535_10023352 574
148 3300005983 Ga0081540_1024258 Ga0081540_10242582 574
149 3300013105 Ga0157369_10000649 Ga0157369_100006496 574
150 3300025242 Ga0209258_100156 Ga0209258_100156100 574
151 3300025254 Ga0209148_1000378 Ga0209148_10003784 574
152 iso_pu_bacteria 2818991460 2819678752 574
153 iso_pu_bacteria 2929177148 2929182347 574
154 iso_pu_bacteria 2945977869 2945978261 574
155 iso_pu_bacteria 2946013367 2946015878 574
156 3300003320 rootH2_10024706 rootH2_1002470614 577
157 3300005548 Ga0070665_100000031 Ga0070665_10000003190 577
158 3300009545 Ga0105237_10177195 Ga0105237_101771951 577
159 3300013306 Ga0163162_10000774 Ga0163162_100007742 577
160 3300025914 Ga0207671_10001156 Ga0207671_1000115620 577
161 3300025972 Ga0207668_10028383 Ga0207668_100283832 577
162 3300028379 Ga0268266_10000146 Ga0268266_1000014689 577
163 3300006195 Ga0075366_10001924 Ga0075366_100019246 578
164 3300009545 Ga0105237_10002032 Ga0105237_1000203215 578
165 3300010375 Ga0105239_10005024 Ga0105239_100050246 578
166 3300031595 Ga0265313_10012612 Ga0265313_100126123 578
167 3300049586 Ga0501070_0009790 Ga0501070_0009790_2814_4559 578
168 3300049590 Ga0501074_0002077 Ga0501074_0002077_3340_5085 578
169 3300050493 nmdc:mga0k408_30533_c1 nmdc:mga0k408_30533_c1_503_2248 578
170 iso_pu_bacteria 2896109856 2896115414 578
171 3300005329 Ga0070683_100102663 Ga0070683_1001026632 579
172 3300005335 Ga0070666_10087642 Ga0070666_100876421 579
173 3300005347 Ga0070668_100033998 Ga0070668_1000339984 579
174 3300005353 Ga0070669_100022506 Ga0070669_1000225063 579
175 3300005356 Ga0070674_100062842 Ga0070674_1000628422 579
176 3300005364 Ga0070673_100025669 Ga0070673_1000256692 579
177 3300005535 Ga0070684_100016235 Ga0070684_1000162354 579
178 3300005563 Ga0068855_100000108 Ga0068855_10000010822 579
179 3300005844 Ga0068862_100098592 Ga0068862_1000985922 579
180 3300006881 Ga0068865_100009022 Ga0068865_1000090225 579
181 3300009093 Ga0105240_10005405 Ga0105240_100054058 579
182 3300009176 Ga0105242_10090417 Ga0105242_100904171 579
183 3300010375 Ga0105239_10128693 Ga0105239_101286932 579
184 3300011119 Ga0105246_10030791 Ga0105246_100307912 579
185 3300013297 Ga0157378_10041727 Ga0157378_100417272 579
186 3300013307 Ga0157372_10001847 Ga0157372_100018478 579
187 3300025907 Ga0207645_10002369 Ga0207645_100023695 579
188 3300025908 Ga0207643_10004791 Ga0207643_100047916 579
189 3300025913 Ga0207695_10000060 Ga0207695_10000060126 579
190 3300025940 Ga0207691_10013075 Ga0207691_100130752 579
191 3300025944 Ga0207661_10020575 Ga0207661_100205752 579
192 3300025949 Ga0207667_10006394 Ga0207667_1000639410 579
193 3300025960 Ga0207651_10086952 Ga0207651_100869522 579
194 3300025972 Ga0207668_10101020 Ga0207668_101010202 579
195 3300026089 Ga0207648_10004329 Ga0207648_100043297 579
196 3300026121 Ga0207683_10001520 Ga0207683_100015209 579
197 iso_pu_bacteria 2821136567 2821139107 579
198 iso_pu_bacteria 2904467357 2904473332 579
199 iso_pu_bacteria 2929239360 2929243826 579
200 3300006358 Ga0068871_100062426 Ga0068871_1000624262 580
201 3300013306 Ga0163162_10000422 Ga0163162_1000042220 580
202 3300014969 Ga0157376_10022367 Ga0157376_100223673 580
203 3300025934 Ga0207686_10020698 Ga0207686_100206982 581
204 3300047318 Ga0495636_0008341 Ga0495636_0008341_1209_2972 581
205 iso_pu_bacteria 2929921140 2929923133 581
206 iso_pu_bacteria 8003151029 8003155968 581
207 3300005367 Ga0070667_100049441 Ga0070667_1000494412 582
208 3300005530 Ga0070679_100034806 Ga0070679_1000348063 582
209 3300005539 Ga0068853_100000353 Ga0068853_10000035320 582
210 3300005539 Ga0068853_100034087 Ga0068853_1000340872 582
211 3300005547 Ga0070693_100032888 Ga0070693_1000328881 582
212 3300009093 Ga0105240_10000107 Ga0105240_10000107108 582
213 3300009093 Ga0105240_10000180 Ga0105240_1000018078 582
214 3300009093 Ga0105240_10011376 Ga0105240_100113762 582
215 3300009545 Ga0105237_10001150 Ga0105237_100011509 582
216 3300009551 Ga0105238_10021444 Ga0105238_100214443 582
217 3300013100 Ga0157373_10038470 Ga0157373_100384702 582
218 3300013104 Ga0157370_10016249 Ga0157370_100162492 582
219 3300013307 Ga0157372_10003994 Ga0157372_100039949 582
220 3300025912 Ga0207707_10001079 Ga0207707_1000107922 582
221 3300025913 Ga0207695_10000077 Ga0207695_1000007732 582
222 3300025913 Ga0207695_10000199 Ga0207695_1000019938 582
223 3300025914 Ga0207671_10001957 Ga0207671_100019577 582
224 3300025917 Ga0207660_10022076 Ga0207660_100220763 582
225 3300025986 Ga0207658_10039147 Ga0207658_100391472 582
226 3300026142 Ga0207698_10102153 Ga0207698_101021532 582
227 3300028381 Ga0268264_10003357 Ga0268264_1000335710 582
228 3300028558 Ga0265326_10017955 Ga0265326_100179551 582
229 3300031730 Ga0307516_10027294 Ga0307516_100272943 582
230 3300044712 Ga0453684_0001244 Ga0453684_0001244_60188_61942 582
231 3300044712 Ga0453684_0011854 Ga0453684_0011854_10211_11965 582
232 3300005262 Ga0065165_1006155 Ga0065165_10061552 583
233 3300025208 Ga0209436_102229 Ga0209436_1022294 583
234 3300003320 rootH2_10004603 rootH2_100046033 584
235 3300005334 Ga0068869_100079734 Ga0068869_1000797342 584
236 3300005843 Ga0068860_100000082 Ga0068860_10000008237 584
237 3300010375 Ga0105239_10089837 Ga0105239_100898372 584
238 3300026089 Ga0207648_10179919 Ga0207648_101799192 584
239 3300028381 Ga0268264_10000013 Ga0268264_10000013422 584
240 3300031507 Ga0307509_10083977 Ga0307509_100839772 584
241 3300033180 Ga0307510_10005431 Ga0307510_100054312 584
242 3300001979 JGI24740J21852_10010733 JGI24740J21852_100107332 585
243 3300001989 JGI24739J22299_10013236 JGI24739J22299_100132362 585
244 3300002738 JGI25154J39366_1000001 JGI25154J39366_1000001420 585
245 3300003215 JGI25153J46596_10005319 JGI25153J46596_100053198 585
246 3300003354 JGI25160J50197_1002491 JGI25160J50197_10024912 585
247 3300003790 Ga0055528_1000086 Ga0055528_100008637 585
248 3300003791 Ga0055530_10007768 Ga0055530_100077683 585
249 3300004625 Ga0055543_1007717 Ga0055543_10077172 585
250 3300005262 Ga0065165_1000112 Ga0065165_100011272 585
251 3300025246 Ga0209646_1000002 Ga0209646_1000002417 585
252 3300025250 Ga0209026_1000218 Ga0209026_100021817 585
253 3300025273 Ga0209673_1000096 Ga0209673_100009642 585
254 3300025295 Ga0209564_1002038 Ga0209564_100203814 585
255 3300025297 Ga0209758_1001153 Ga0209758_100115316 585
256 3300025298 Ga0209050_1025037 Ga0209050_10250372 585
257 3300025302 Ga0207426_1000502 Ga0207426_10005022 585
258 3300025302 Ga0207426_1008015 Ga0207426_10080152 585
259 3300025304 Ga0209257_1007578 Ga0209257_10075784 585
260 3300031711 Ga0265314_10008766 Ga0265314_100087662 585

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00664

ABC_membrane

ABC transporter transmembrane region

65

333

0.99

PF00005

ABC_tran

ABC transporter

391

539

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
2ixf-assembly2.cif.gz_C crystal structure of the atpase domain of tap1 with atp (d645q, q678h mutant) 0.9451 331 573
3vx4-assembly1.cif.gz_A crystal structure of the nucleotide-binding domain of s. mutans coma, a bifunctional atp-binding cassette transporter involved in the quorum-sensing pathway 0.9423 335 571
2ixf-assembly2.cif.gz_D crystal structure of the atpase domain of tap1 with atp (d645q, q678h mutant) 0.9381 331 572
2fgk-assembly2.cif.gz_B crystal structure of the abc-cassette e631q mutant of hlyb with bound atp 0.9344 341 572
4k8o-assembly1.cif.gz_A-2 crystal structure of the atpase domain of tap1 with atp (d645n, d651a mutant) 0.9343 331 568
ID Description Score Start End Superfamily
5mkkB02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9532 334 575 3.40.50.300
af_A4I2J3_1020_1267_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9482 340 575 3.40.50.300
af_P9WQJ1_326_578_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9406 333 579 3.40.50.300
af_Q8IHR3_602_823_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9401 341 552 3.40.50.300
af_P9WQJ7_327_576_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9393 336 578 3.40.50.300
ID Description Score Start End GO Terms
AF-M5C5N4-F1-model_v4 ATP-binding cassette, subfamily B (MDR/TAP),member 1 (EC 3.6.1.3) 0.9398 330 573 GO:0005524
GO:0016020
GO:0016887
GO:0042626
AF-A0A4Y4X267-F1-model_v4 ABC transporter permease 0.9252 19 335 GO:0005524
GO:0005886
GO:0015421
AF-A0A0T8EKT0-F1-model_v4 deleted 0.9138 361 547
AF-A0A660MZS5-F1-model_v4 ATP-binding cassette domain-containing protein 0.9073 363 549 GO:0005524
GO:0005886
GO:0016887
GO:0034040
AF-A0A7R9FZB9-F1-model_v4 ABC transporter domain-containing protein 0.9023 381 573 GO:0005524
GO:0016020
GO:0016887
GO:0042626

Feature Viewer

pLDDT pTM Quality
76.44 0.53 Medium
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Predicted Structure (AlphaFold2)

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