F369769

General Info

Members Datasets Scaffolds Average Seq Length
260 189 520 866

Family's Representative Sequence

Representative Sequence 3300045051|Ga0451576_0001459|Ga0451576_0001459_17767_20247
Length 808
Sequence MKQYNAIKVKYPGALLLFRVGDFYETFGQDAIAASKVLDIVLTKRGNGSAAETALAGFPHHALDTYLPKLVRAGHRVAICDQLEDPRFVKGIVKRGVTELVTPGISFNDNVLEKKRNNFLCSVYEGKNHLGAAFLDISTGEFYCAQGSANYIFKLIQSLSPAEIIFSKTQREKIETSIGQDYATFALDEWVYAYDYAHDKLISQFKTASLKGFGIDDLPDAIIASGSILHYLEATEHKDTHHIAAISRIDEDQYVWLDKFTIRNLELVYSQNDGGVPLLQVLDQTVTPMGSRQLRKWMVLPLKERQTIEERLEVVTWFYEHVELAEEMIEWLRQITDLERLISKVAVGRINPRELLQLKRSLQAIIPMKASLEKQSQVELRKLGDQLHRCDFLLEKIEKELREDAPMLIHQGGIIKEGINSELDELRGLAYSGKDFLLQIQKREVDRTGIGSLKISFNKVFGYYLEVSNANKDKVPADWIRKQTLVNAERYITEELKVYEEELIRHASDYISQIQQNARTIASLDCLVSFAMTAKANRYARPEISDSTRLAIKAGRHPVIEKQLPVGESYVPNDIYLDTETQQILIITGPNMAGKSAMLRQTALIVLMAQMGSYVPAESAVVGLVDKVFTRVGASDNLSRGESTFMVEMTETASILNNLSDRSLILMDEIGRGTSTYDGVSIAWAIVEYLHNHKDFRPKTLFATHYHELNQLAEDHVRVKNFNVSVKEVGDKIIFMRKLKEGGSEHSFGIHVAQLAGMPNKVVLRANDILRFLEKDKHKNEKKKFEDLPHPTPQMSLFAADPKMKEIP

Samples

Sample ID Description Type Environment
1 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
2 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
3 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
4 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
5 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
6 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
7 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
8 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
9 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
10 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
11 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
12 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
13 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
14 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
15 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
16 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
17 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
18 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
19 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
20 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
21 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
22 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
23 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
24 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
25 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
26 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
27 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
28 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
29 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
30 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
32 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
33 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
34 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
35 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
36 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
37 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
38 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
39 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
40 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
41 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
42 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
43 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
44 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
45 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
46 3300015682 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A01 Metagenome Rhizosphere
47 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
48 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
49 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
50 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
51 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
52 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
53 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
54 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
55 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
56 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
57 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
75 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
76 3300030083 Coralloid root microbial communities from Jiquipilas, Chiapas, Mexico - JPPOOL-T1 Metagenome Unclassified
77 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
78 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
79 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
80 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
81 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
82 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
83 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
84 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
85 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
86 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
87 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
88 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
89 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
90 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
91 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
92 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
93 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
94 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
95 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
96 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
97 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
98 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
99 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
100 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
101 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
102 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
103 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
104 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
105 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
106 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
107 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
108 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
109 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
110 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
111 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
112 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
113 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
114 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
115 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
116 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
117 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
118 2551306519 Bacillus sp. WBUNB004 Isolate Rhizosphere
119 2585427687 Pedobacter borealis DSM 19626 Isolate Rhizosphere
120 2593339131 Bacillus sp. UNCCL81 Isolate Unclassified
121 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
122 2643221730 Bacillus sp. Root131 Isolate Unclassified
123 2684622632 Bacillus cereus 905 Isolate Unclassified
124 2695420987 Bacillus thuringiensis KNU-07 Isolate Unclassified
125 2703719227 Bacillus mycoides GOE6 Isolate Rhizosphere
126 2718218445 Bacillus sp. B25(2016b) Isolate Rhizosphere
127 2721755487 Sphingobacterium sp. B29 Isolate Rhizosphere
128 2738541302 Pedobacter sp. CF074 Isolate Unclassified
129 2738541358 Bacillus sp. OV752 Isolate Unclassified
130 2738543006 Bacillus sp. OK077 Isolate Unclassified
131 2738543017 Bacillus sp. OV186 Isolate Unclassified
132 2738543023 Pedobacter sp. OK628 Isolate Unclassified
133 2739367651 Pedobacter sp. OK291 Isolate Unclassified
134 2739367656 Pedobacter sp. CF523 Isolate Unclassified
135 2739367663 Pedobacter sp. YR510 Isolate Unclassified
136 2739367866 Hymenobacter sp. YR204 Isolate Unclassified
137 2757320391 Bacillus sp. NFR08 Isolate Rhizoplane
138 2775507177 Bacillus sp. AFS055030 Isolate Unclassified
139 2775507192 Bacillus sp. AFS041924 Isolate Unclassified
140 2818991437 Pedobacter terrae 518 Isolate Unclassified
141 2818991443 Bacillus thuringiensis 1230 Isolate Unclassified
142 2839989709 Pontibacter arcticus 2b14 Isolate Unclassified
143 2842722452 Pedobacter sp. R-72249 Isolate Unclassified
144 2842903701 Olivibacter sp. R-72191 Isolate Unclassified
145 2842909656 Pedobacter sp. R-72393 Isolate Unclassified
146 2849281842 Pedobacter sp. AK013 Isolate Rhizosphere
147 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
148 2852627209 Pedobacter sp. AK017 Isolate Rhizosphere
149 2857586860 Bacillus sp. R-71935 Isolate Unclassified
150 2857627736 Pedobacter sp. R-74587 Isolate Unclassified
151 2881644220 Siminovitchia terrae LMG 29736 Isolate Rhizosphere
152 2884634485 Algoriphagus kandeliae XY-J91 Isolate Unclassified
153 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
154 2890737413 Parapedobacter sp. SGR-10 Isolate Rhizosphere
155 2890804823 Fluviicola sp. SGL-29 Isolate Rhizosphere
156 2896085136 Chitinophaga alhagiae T22 Isolate Unclassified
157 2896317667 Sphingobacterium sp. SGR-19 Isolate Rhizosphere
158 2896344016 Sphingobacterium sp. SGL-16 Isolate Rhizosphere
159 2898713307 Sphingobacterium sp. SGG-5 Isolate Rhizosphere
160 2904445276 Pedobacter terrae 1734 Isolate Rhizosphere
161 2904780799 Sphingobacterium sp. 1304 Isolate Rhizosphere
162 2910245624 Adhaeribacter radiodurans KUDC8001 Isolate Rhizosphere
163 2919177583 Sphingobacterium sp. 2149 Isolate Rhizosphere
164 2919186247 Pedobacter africanus 2697 Isolate Rhizosphere
165 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
166 2919692658 Algoriphagus sp. 4150 Isolate Rhizosphere
167 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
168 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
169 2929233124 Bacillus sp. R-74298 Hybrid assembly Isolate Unclassified
170 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
171 2936340661 Gottfriedia acidiceleris 1-17 Isolate Rhizosphere
172 2938917290 Bacillus sp. CR71 Isolate Unclassified
173 2939664404 Pedobacter africanus 2990 Isolate Rhizosphere
174 2945997725 Pedobacter sp. W3I1 Isolate Rhizosphere
175 2947426588 Bacillus sp. RZ2MS9 Isolate Rhizosphere
176 2954016120 Flavobacterium sp. W4I14 Isolate Rhizosphere
177 2956897341 Ectobacillus funiculus W18-2 Isolate Rhizosphere
178 2965761152 Bacillus sp. COPE52 Isolate Unclassified
179 2979083700 Bacillus toyonensis SORGH_AS 407 Isolate Unclassified
180 3001267043 Bacillus sp. FJAT-49870 Isolate Rhizosphere
181 3001272096 Lederbergia citrisecunda FJAT-49732 Isolate Rhizosphere
182 3003233435 Sphingobacterium shayense CrR18 Isolate Unclassified
183 3006969106 Bacillus sp. FJAT-50079 Isolate Rhizosphere
184 3006984091 Lederbergia citrea FJAT-49754 Isolate Rhizosphere
185 3006988479 Bacillus sp. FJAT-49711 Isolate Rhizosphere
186 8022621104 Bacillus sp. PIC28 Isolate Rhizosphere
187 8023438354 Bacillus sp. BH2 Isolate Unclassified
188 8023444577 Bacillus sp. BH32 Isolate Unclassified
189 8055588893 Parapedobacter lycopersici KACC 18788 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 72.31
Metatranscriptomes 0
Isolates 27.69

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 13.08
Nodule 0
Rhizoplane 1.15
Rhizosphere 68.85
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0451576_0001459 3300045051 Bacteria 40206
2 JGI24735J21928_10000004 3300002067 Bacteria 381713
3 JGI25162J39368_1000089 3300002737 Bacteria 104054
4 JGI25162J39368_1000779 3300002737 Bacteria 21435
5 JGI25152J39213_1000056 3300002773 Bacteria 75516
6 JGI25150J39212_1000009 3300002774 Bacteria 249509
7 JGI25159J45721_1004594 3300002987 Bacteria 4538
8 JGI25151J46595_10000017 3300003187 Bacteria 249509
9 JGI25151J46595_10002970 3300003187 Bacteria 9683
10 JGI25151J46595_10005832 3300003187 Bacteria 6302
11 JGI25165J46597_1000978 3300003214 Bacteria 19157
12 JGI25153J46596_10000023 3300003215 Bacteria 249509
13 rootH2_10001891 3300003320 Bacteria 464318
14 rootH2_10034357 3300003320 Bacteria 16673
15 rootH1_10031240 3300003323 Bacteria 24555
16 Ga0055532_1000004 3300003758 Bacteria 471824
17 Ga0055536_1000030 3300003781 Bacteria 153926
18 Ga0065714_10006420 3300005288 Bacteria 5925
19 Ga0065714_10064922 3300005288 Bacteria 15411
20 Ga0065714_10070850 3300005288 Bacteria 3669
21 Ga0065704_10072353 3300005289 Bacteria 8682
22 Ga0070658_10000049 3300005327 Bacteria 119985
23 Ga0070676_10000670 3300005328 Bacteria 16699
24 Ga0070671_100006787 3300005355 Bacteria 9161
25 Ga0070678_100008725 3300005456 Bacteria 6089
26 Ga0070662_100000200 3300005457 Bacteria 35252
27 Ga0068853_100050651 3300005539 Bacteria 3573
28 Ga0070665_100000020 3300005548 Bacteria 389687
29 Ga0068855_100000019 3300005563 Bacteria 205963
30 Ga0068855_100001648 3300005563 Bacteria 27984
31 Ga0068855_100008300 3300005563 Bacteria 12553
32 Ga0068856_100000015 3300005614 Bacteria 157353
33 Ga0068856_100006470 3300005614 Bacteria 11488
34 Ga0068856_100022309 3300005614 Bacteria 6154
35 Ga0075366_10010122 3300006195 Bacteria 5288
36 Ga0068871_100005658 3300006358 Bacteria 8767
37 Ga0068865_100003067 3300006881 Bacteria 9993
38 Ga0105251_10011133 3300009011 Bacteria 5157
39 Ga0105240_10001584 3300009093 Bacteria 38608
40 Ga0105240_10088052 3300009093 Bacteria 3800
41 Ga0111539_10008369 3300009094 Bacteria 13164
42 Ga0105243_10000018 3300009148 Bacteria 227618
43 Ga0105241_10000086 3300009174 Bacteria 69935
44 Ga0105241_10005160 3300009174 Bacteria 9637
45 Ga0105237_10000271 3300009545 Bacteria 73094
46 Ga0105237_10000408 3300009545 Bacteria 61180
47 Ga0105239_10000758 3300010375 Bacteria 45640
48 Ga0105239_10000987 3300010375 Bacteria 39852
49 Ga0105239_10000999 3300010375 Bacteria 39639
50 Ga0105239_10004748 3300010375 Bacteria 16133
51 Ga0105239_10019173 3300010375 Bacteria 7557
52 Ga0157373_10000249 3300013100 Bacteria 44077
53 Ga0157373_10024845 3300013100 Bacteria 4337
54 Ga0157371_10000034 3300013102 Bacteria 223947
55 Ga0157371_10002298 3300013102 Bacteria 18416
56 Ga0157371_10002487 3300013102 Bacteria 17524
57 Ga0157371_10024580 3300013102 Bacteria 4397
58 Ga0157369_10000002 3300013105 Bacteria 524510
59 Ga0157369_10001709 3300013105 Bacteria 26733
60 Ga0157374_10000128 3300013296 Bacteria 69753
61 Ga0157374_10001875 3300013296 Bacteria 17668
62 Ga0157374_10005779 3300013296 Bacteria 10445
63 Ga0163162_10000608 3300013306 Bacteria 33219
64 Ga0163162_10015844 3300013306 Bacteria 7366
65 Ga0157372_10000017 3300013307 Bacteria 219543
66 Ga0157372_10000250 3300013307 Bacteria 59465
67 Ga0157372_10008776 3300013307 Bacteria 10735
68 Ga0157375_10034310 3300013308 Bacteria 4833
69 Ga0157380_10000018 3300014326 Bacteria 116537
70 Ga0182008_10002154 3300014497 Bacteria 12555
71 Ga0182006_1000228 3300015261 Bacteria 53618
72 Ga0182006_1000638 3300015261 Bacteria 24857
73 Ga0182007_10000001 3300015262 Bacteria 1127301
74 Ga0183373_1010 3300015682 Bacteria 196982
75 Ga0163161_10000218 3300017792 Bacteria 52323
76 Ga0209147_100010 3300025229 Bacteria 741391
77 Ga0209437_100101 3300025233 Bacteria 226668
78 Ga0209437_100221 3300025233 Bacteria 104135
79 Ga0207425_1000007 3300025245 Bacteria 777411
80 Ga0209129_1000006 3300025258 Bacteria 777761
81 Ga0209233_1000124 3300025261 Bacteria 226743
82 Ga0209676_1000001 3300025292 Bacteria 1852142
83 Ga0209676_1005304 3300025292 Bacteria 6792
84 Ga0209025_1000025 3300025294 Bacteria 524454
85 Ga0209025_1000302 3300025294 Bacteria 110301
86 Ga0209025_1000577 3300025294 Bacteria 66553
87 Ga0209025_1000931 3300025294 Bacteria 44624
88 Ga0209025_1001875 3300025294 Bacteria 24630
89 Ga0209025_1004405 3300025294 Bacteria 12255
90 Ga0209758_1000016 3300025297 Bacteria 778557
91 Ga0209050_1000018 3300025298 Bacteria 723263
92 Ga0207696_1013301 3300025711 Bacteria 2874
93 Ga0207655_1003392 3300025728 Bacteria 11893
94 Ga0207647_10020029 3300025904 Bacteria 4491
95 Ga0207645_10004385 3300025907 Bacteria 10452
96 Ga0207705_10000079 3300025909 Bacteria 119999
97 Ga0207695_10000916 3300025913 Bacteria 52837
98 Ga0207695_10030576 3300025913 Bacteria 5925
99 Ga0207671_10002034 3300025914 Bacteria 22208
100 Ga0207671_10002763 3300025914 Bacteria 18331
101 Ga0207671_10005705 3300025914 Bacteria 11371
102 Ga0207671_10008710 3300025914 Bacteria 8559
103 Ga0207706_10000120 3300025933 Bacteria 84222
104 Ga0207709_10000021 3300025935 Bacteria 386722
105 Ga0207709_10036188 3300025935 Bacteria 2924
106 Ga0207704_10000211 3300025938 Bacteria 29511
107 Ga0207667_10000020 3300025949 Bacteria 374770
108 Ga0207667_10013407 3300025949 Bacteria 9378
109 Ga0207667_10018402 3300025949 Bacteria 7835
110 Ga0207651_10012447 3300025960 Bacteria 4816
111 Ga0207702_10001062 3300026078 Bacteria 28135
112 Ga0207648_10003765 3300026089 Bacteria 15844
113 Ga0207683_10033994 3300026121 Bacteria 4430
114 Ga0207698_10003178 3300026142 Bacteria 9854
115 Ga0268266_10000018 3300028379 Bacteria 569141
116 Ga0265323_10002539 3300028653 Bacteria 8313
117 Ga0307515_10000094 3300028794 Bacteria 210723
118 Ga0307515_10000778 3300028794 Bacteria 73451
119 Ga0307515_10003061 3300028794 Bacteria 35405
120 Ga0237817_10006 3300030083 Bacteria 90374
121 Ga0316177_1149054 3300030731 Bacteria 6276
122 Ga0316181_1184716 3300030744 Bacteria 17773
123 Ga0265316_10011044 3300031344 Bacteria 8185
124 Ga0307408_100003667 3300031548 Bacteria 10465
125 Ga0307405_10000046 3300031731 Bacteria 71442
126 Ga0307407_10000090 3300031903 Bacteria 32483
127 Ga0307416_100000195 3300032002 Bacteria 32400
128 Ga0307414_10000059 3300032004 Bacteria 112136
129 Ga0307507_10002030 3300033179 Bacteria 43887
130 Ga0307510_10021194 3300033180 Bacteria 7577
131 Ga0316584_0000112 3300036712 Bacteria 34210
132 Ga0395899_0000121 3300037312 Bacteria 125324
133 Ga0395899_0000328 3300037312 Bacteria 60257
134 Ga0395900_0028668 3300037418 Bacteria 5705
135 Ga0395898_0002838 3300037466 Bacteria 19832
136 Ga0395905_0023597 3300037471 Bacteria 5811
137 Ga0395905_0028071 3300037471 Bacteria 5306
138 Ga0395901_0001629 3300038443 Bacteria 23216
139 Ga0451577_0000703 3300042876 Bacteria 52315
140 Ga0451577_0002924 3300042876 Bacteria 19583
141 Ga0451577_0009043 3300042876 Bacteria 9618
142 Ga0453683_0000045 3300044673 Bacteria 211088
143 Ga0453683_0000759 3300044673 Bacteria 32471
144 Ga0453683_0002370 3300044673 Bacteria 14734
145 Ga0466966_0016870 3300044684 Bacteria 4825
146 Ga0453684_0001715 3300044712 Bacteria 58849
147 Ga0453684_0001990 3300044712 Bacteria 52425
148 Ga0453684_0008555 3300044712 Bacteria 18262
149 Ga0453684_0013482 3300044712 Bacteria 13267
150 Ga0453684_0014717 3300044712 Bacteria 12471
151 Ga0453684_0028631 3300044712 Bacteria 7940
152 Ga0453684_0082665 3300044712 Bacteria 4000
153 Ga0453684_0120596 3300044712 Bacteria 3167
154 Ga0451576_0000175 3300045051 Bacteria 161976
155 Ga0451576_0000352 3300045051 Bacteria 110468
156 Ga0451576_0013680 3300045051 Bacteria 9066
157 Ga0451576_0023669 3300045051 Bacteria 6648
158 Ga0451576_0039025 3300045051 Bacteria 5025
159 Ga0466967_0000070 3300045976 Bacteria 37759
160 Ga0495638_0000004 3300046460 Bacteria 700795
161 Ga0495650_0000132 3300046471 Bacteria 174226
162 Ga0495585_0000429 3300046492 Bacteria 40273
163 Ga0495585_0000758 3300046492 Bacteria 28597
164 Ga0495606_0000100 3300046507 Bacteria 147592
165 Ga0495606_0003600 3300046507 Bacteria 16307
166 Ga0495606_0016143 3300046507 Bacteria 5712
167 Ga0495610_0000126 3300046512 Bacteria 85368
168 Ga0495610_0000719 3300046512 Bacteria 31465
169 Ga0495610_0007922 3300046512 Bacteria 6975
170 Ga0495648_0033760 3300046524 Bacteria 3338
171 Ga0495609_0005798 3300046538 Bacteria 6411
172 Ga0495633_0000035 3300046558 Bacteria 185403
173 Ga0495633_0004165 3300046558 Bacteria 9294
174 Ga0495668_0000032 3300046616 Bacteria 254951
175 Ga0495625_0000036 3300046660 Bacteria 221680
176 Ga0495625_0000227 3300046660 Bacteria 88834
177 Ga0495661_0006094 3300046665 Bacteria 8496
178 Ga0495649_0000017 3300046694 Bacteria 221685
179 Ga0495687_001106 3300047443 Bacteria 26243
180 Ga0495687_001261 3300047443 Bacteria 23987
181 Ga0495686_0001209 3300047472 Bacteria 29698
182 Ga0496102_0006071 3300048905 Bacteria 10301
183 Ga0496117_0000934 3300048920 Bacteria 44763
184 nmdc:mga0k408_5136_c1 3300050493 Bacteria 6935
185 Ga0500618_000004 3300053125 Bacteria 293180
186 Ga0500616_0000015 3300053153 Bacteria 633259
187 Ga0500622_0000086 3300053156 Bacteria 99366
188 Ga0500622_0000601 3300053156 Bacteria 32719
189 2553391146 2551306519 Bacteria 5465154
190 2586207603 2585427687 Bacteria 5544917
191 2595089246 2593339131 Bacteria 5116855
192 2599478379 2599185184 Bacteria 6430550
193 2644710077 2643221730 Bacteria 6523787
194 2685151734 2684622632 Bacteria 5380049
195 2698321481 2695420987 Bacteria 6152737
196 2705995679 2703719227 Bacteria 5631989
197 2721506898 2718218445 Bacteria 5113413
198 2722726430 2721755487 Bacteria 6357185
199 2738853227 2738541302 Bacteria 5944758
200 2739155114 2738541358 Bacteria 5932299
201 2739207564 2738543006 Bacteria 5904091
202 2739268493 2738543017 Bacteria 4271950
203 2739303998 2738543023 Bacteria 6767879
204 2739588762 2739367651 Bacteria 6359826
205 2739616044 2739367656 Bacteria 5152243
206 2739645181 2739367663 Bacteria 5040914
207 2740031642 2739367866 Bacteria 4215900
208 2757565001 2757320391 Bacteria 4746095
209 2777764024 2775507177 Bacteria 4384303
210 2777839819 2775507192 Bacteria 4622234
211 2819548038 2818991437 Bacteria 5805520
212 2819580909 2818991443 Bacteria 6598732
213 2839990265 2839989709 Bacteria 3773432
214 2842726184 2842722452 Bacteria 6263924
215 2842906844 2842903701 Bacteria 6986368
216 2842910427 2842909656 Bacteria 6185908
217 2849282276 2849281842 Bacteria 6065644
218 2852624035 2852623160 Bacteria 4376875
219 2852627329 2852627209 Bacteria 5896285
220 2857588521 2857586860 Bacteria 4354574
221 2857629160 2857627736 Bacteria 5625397
222 2881647418 2881644220 Bacteria 5302661
223 2884635654 2884634485 Bacteria 3928637
224 2884937042 2884933994 Bacteria 4535041
225 2890738008 2890737413 Bacteria 4269751
226 2890807871 2890804823 Bacteria 3717572
227 2896087821 2896085136 Bacteria 6129793
228 2896319365 2896317667 Bacteria 4606601
229 2896346636 2896344016 Bacteria 3811746
230 2898713577 2898713307 Bacteria 4110805
231 2904445611 2904445276 Bacteria 5310396
232 2904783700 2904780799 Bacteria 5840761
233 2910250119 2910245624 Bacteria 6935613
234 2919182250 2919177583 Bacteria 5641607
235 2919187363 2919186247 Bacteria 6244071
236 2919442244 2919437846 Bacteria 6199444
237 2919693468 2919692658 Bacteria 5943958
238 2928080568 2928078545 Bacteria 6534839
239 2928150796 2928147474 Bacteria 6512076
240 2929237424 2929233124 Bacteria 5948380
241 2932083047 2932082852 Bacteria 6563563
242 2936343550 2936340661 Bacteria 5139038
243 2938921621 2938917290 Bacteria 5914775
244 2939665369 2939664404 Bacteria 6364494
245 2946000780 2945997725 Bacteria 6404843
246 2947430509 2947426588 Bacteria 5357194
247 2954017655 2954016120 Bacteria 6446024
248 2956901262 2956897341 Bacteria 5447711
249 2965765308 2965761152 Bacteria 5806513
250 2979087384 2979083700 Bacteria 5894929
251 3001267703 3001267043 Bacteria 4823521
252 3001273178 3001272096 Bacteria 4729684
253 3003233464 3003233435 Bacteria 4458031
254 3006970528 3006969106 Bacteria 4739423
255 3006985443 3006984091 Bacteria 4207523
256 3006989527 3006988479 Bacteria 4767936
257 8022623631 8022621104 Bacteria 5241040
258 8023440514 8023438354 Bacteria 5779374
259 8023444582 8023444577 Bacteria 5661597
260 8055591150 8055588893 Bacteria 3619545
261 Ga0451576_0001459
262 JGI24735J21928_10000004
263 JGI25162J39368_1000089
264 JGI25162J39368_1000779
265 JGI25152J39213_1000056
266 JGI25150J39212_1000009
267 JGI25159J45721_1004594
268 JGI25151J46595_10000017
269 JGI25151J46595_10002970
270 JGI25151J46595_10005832
271 JGI25165J46597_1000978
272 JGI25153J46596_10000023
273 rootH2_10001891
274 rootH2_10034357
275 rootH1_10031240
276 Ga0055532_1000004
277 Ga0055536_1000030
278 Ga0065714_10006420
279 Ga0065714_10064922
280 Ga0065714_10070850
281 Ga0065704_10072353
282 Ga0070658_10000049
283 Ga0070676_10000670
284 Ga0070671_100006787
285 Ga0070678_100008725
286 Ga0070662_100000200
287 Ga0068853_100050651
288 Ga0070665_100000020
289 Ga0068855_100000019
290 Ga0068855_100001648
291 Ga0068855_100008300
292 Ga0068856_100000015
293 Ga0068856_100006470
294 Ga0068856_100022309
295 Ga0075366_10010122
296 Ga0068871_100005658
297 Ga0068865_100003067
298 Ga0105251_10011133
299 Ga0105240_10001584
300 Ga0105240_10088052
301 Ga0111539_10008369
302 Ga0105243_10000018
303 Ga0105241_10000086
304 Ga0105241_10005160
305 Ga0105237_10000271
306 Ga0105237_10000408
307 Ga0105239_10000758
308 Ga0105239_10000987
309 Ga0105239_10000999
310 Ga0105239_10004748
311 Ga0105239_10019173
312 Ga0157373_10000249
313 Ga0157373_10024845
314 Ga0157371_10000034
315 Ga0157371_10002298
316 Ga0157371_10002487
317 Ga0157371_10024580
318 Ga0157369_10000002
319 Ga0157369_10001709
320 Ga0157374_10000128
321 Ga0157374_10001875
322 Ga0157374_10005779
323 Ga0163162_10000608
324 Ga0163162_10015844
325 Ga0157372_10000017
326 Ga0157372_10000250
327 Ga0157372_10008776
328 Ga0157375_10034310
329 Ga0157380_10000018
330 Ga0182008_10002154
331 Ga0182006_1000228
332 Ga0182006_1000638
333 Ga0182007_10000001
334 Ga0183373_1010
335 Ga0163161_10000218
336 Ga0209147_100010
337 Ga0209437_100101
338 Ga0209437_100221
339 Ga0207425_1000007
340 Ga0209129_1000006
341 Ga0209233_1000124
342 Ga0209676_1000001
343 Ga0209676_1005304
344 Ga0209025_1000025
345 Ga0209025_1000302
346 Ga0209025_1000577
347 Ga0209025_1000931
348 Ga0209025_1001875
349 Ga0209025_1004405
350 Ga0209758_1000016
351 Ga0209050_1000018
352 Ga0207696_1013301
353 Ga0207655_1003392
354 Ga0207647_10020029
355 Ga0207645_10004385
356 Ga0207705_10000079
357 Ga0207695_10000916
358 Ga0207695_10030576
359 Ga0207671_10002034
360 Ga0207671_10002763
361 Ga0207671_10005705
362 Ga0207671_10008710
363 Ga0207706_10000120
364 Ga0207709_10000021
365 Ga0207709_10036188
366 Ga0207704_10000211
367 Ga0207667_10000020
368 Ga0207667_10013407
369 Ga0207667_10018402
370 Ga0207651_10012447
371 Ga0207702_10001062
372 Ga0207648_10003765
373 Ga0207683_10033994
374 Ga0207698_10003178
375 Ga0268266_10000018
376 Ga0265323_10002539
377 Ga0307515_10000094
378 Ga0307515_10000778
379 Ga0307515_10003061
380 Ga0237817_10006
381 Ga0316177_1149054
382 Ga0316181_1184716
383 Ga0265316_10011044
384 Ga0307408_100003667
385 Ga0307405_10000046
386 Ga0307407_10000090
387 Ga0307416_100000195
388 Ga0307414_10000059
389 Ga0307507_10002030
390 Ga0307510_10021194
391 Ga0316584_0000112
392 Ga0395899_0000121
393 Ga0395899_0000328
394 Ga0395900_0028668
395 Ga0395898_0002838
396 Ga0395905_0023597
397 Ga0395905_0028071
398 Ga0395901_0001629
399 Ga0451577_0000703
400 Ga0451577_0002924
401 Ga0451577_0009043
402 Ga0453683_0000045
403 Ga0453683_0000759
404 Ga0453683_0002370
405 Ga0466966_0016870
406 Ga0453684_0001715
407 Ga0453684_0001990
408 Ga0453684_0008555
409 Ga0453684_0013482
410 Ga0453684_0014717
411 Ga0453684_0028631
412 Ga0453684_0082665
413 Ga0453684_0120596
414 Ga0451576_0000175
415 Ga0451576_0000352
416 Ga0451576_0013680
417 Ga0451576_0023669
418 Ga0451576_0039025
419 Ga0466967_0000070
420 Ga0495638_0000004
421 Ga0495650_0000132
422 Ga0495585_0000429
423 Ga0495585_0000758
424 Ga0495606_0000100
425 Ga0495606_0003600
426 Ga0495606_0016143
427 Ga0495610_0000126
428 Ga0495610_0000719
429 Ga0495610_0007922
430 Ga0495648_0033760
431 Ga0495609_0005798
432 Ga0495633_0000035
433 Ga0495633_0004165
434 Ga0495668_0000032
435 Ga0495625_0000036
436 Ga0495625_0000227
437 Ga0495661_0006094
438 Ga0495649_0000017
439 Ga0495687_001106
440 Ga0495687_001261
441 Ga0495686_0001209
442 Ga0496102_0006071
443 Ga0496117_0000934
444 nmdc:mga0k408_5136_c1
445 Ga0500618_000004
446 Ga0500616_0000015
447 Ga0500622_0000086
448 Ga0500622_0000601
449 2553391146
450 2586207603
451 2595089246
452 2599478379
453 2644710077
454 2685151734
455 2698321481
456 2705995679
457 2721506898
458 2722726430
459 2738853227
460 2739155114
461 2739207564
462 2739268493
463 2739303998
464 2739588762
465 2739616044
466 2739645181
467 2740031642
468 2757565001
469 2777764024
470 2777839819
471 2819548038
472 2819580909
473 2839990265
474 2842726184
475 2842906844
476 2842910427
477 2849282276
478 2852624035
479 2852627329
480 2857588521
481 2857629160
482 2881647418
483 2884635654
484 2884937042
485 2890738008
486 2890807871
487 2896087821
488 2896319365
489 2896346636
490 2898713577
491 2904445611
492 2904783700
493 2910250119
494 2919182250
495 2919187363
496 2919442244
497 2919693468
498 2928080568
499 2928150796
500 2929237424
501 2932083047
502 2936343550
503 2938921621
504 2939665369
505 2946000780
506 2947430509
507 2954017655
508 2956901262
509 2965765308
510 2979087384
511 3001267703
512 3001273178
513 3003233464
514 3006970528
515 3006985443
516 3006989527
517 8022623631
518 8023440514
519 8023444582
520 8055591150

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00488

MutS_V

MutS domain V

585

774

0.97

PF01624

MutS_I

MutS domain I

1

110

0.97

PF05190

MutS_IV

MutS family domain IV

418

509

0.97

PF05192

MutS_III

MutS domain III

260

531

0.94

PF05188

MutS_II

MutS domain II

118

244

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
7ou0-assembly1.cif.gz_A the structure of muts bound to two molecules of adp-vanadate 0.894 1 792
7ou2-assembly1.cif.gz_A the structure of muts bound to two molecules of adp 0.8939 1 792
7ou4-assembly1.cif.gz_B the structure of muts bound to one molecule of atp and one molecule of adp 0.8908 1 792
7ou4-assembly1.cif.gz_B the structure of muts bound to one molecule of atp and one molecule of adp 0.8883 1 792
7ou2-assembly1.cif.gz_B the structure of muts bound to two molecules of adp 0.8881 4 792
ID Description Score Start End Superfamily
1e3mB04 Mainly Alpha;Orthogonal Bundle;MutS, DNA mismatch repair protein; Chain A, domain 3; 0.9327 304 554 1.10.1420.10
3zljA05 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9263 557 792 3.40.50.300
1oh6B02 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;MutS, connector domain 0.9221 117 252 3.30.420.110
2wtuB03 Mainly Alpha;Orthogonal Bundle;MutS, DNA mismatch repair protein; Chain A, domain 3; 0.9176 253 554 1.10.1420.10
1e3mB04 Mainly Alpha;Orthogonal Bundle;MutS, DNA mismatch repair protein; Chain A, domain 3; 0.915 304 554 1.10.1420.10
ID Description Score Start End GO Terms
AF-K1U212-F1-model_v4 DNA mismatch repair protein MutS domain protein 0.9732 584 760 GO:0005524
GO:0005829
GO:0006298
GO:0030983
GO:0140664
AF-D5LU65-F1-model_v4 Methyl-directed mismatch repair protein 0.9707 569 739 GO:0005524
GO:0005829
GO:0006298
GO:0030983
GO:0140664
AF-K1U212-F1-model_v4 DNA mismatch repair protein MutS domain protein 0.9678 584 760 GO:0005524
GO:0005829
GO:0006298
GO:0030983
GO:0140664
AF-A0A1B1GFK4-F1-model_v4 DNA mismatch repair protein MutS 0.9554 588 771 GO:0005524
GO:0005829
GO:0006298
GO:0030983
GO:0140664
AF-A0A161TEZ9-F1-model_v4 Dna mismatch repair protein msh6 0.9497 586 722 GO:0005524
GO:0006298
GO:0030983
GO:0032301
GO:0140664

Map