F369901
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 260 | 176 | 521 | 378 |
Family's Representative Sequence
| Representative Sequence | 3300049663|Ga0501223_006550|Ga0501223_006550_282_1634 |
| Length | 433 |
| Sequence | VLYSFFEIEVHLPRFFLQSLCLNWILPGQINFFIIHITILLNAATTRKAMKIPVFIQQLNPTVMNQKIWLSSPHMGGNESLYVKNAFDTNWIAPLGPHVDGFEKDLETYFGGDTHVAALNSGTSALHLALIILGVQAGDEVLCQSLTFSASANPIKYQGATPIFVDSEESTWNMSPEFLQIAILDRIAKGKKPKAIIVVHLYGMPAQIDRIVEIGASKGKKIGTFGDISILSFNGNKIITTSGGGAMISANEEWIAKAKFLATQARDSAPYYQHSQVGYNYRMSNVCASIGRGQMEVLLLRVSQRRKNFRLYQQYLSSIPGIQFQNEQNGDYFSNHWLSAITIEEGEGRMNNIDICMALEKENIEARPIWKPMHLQPVFARNPFYGDETSNRLFRKGLCLPSGSNLTKHDILTVISHVKKCFSKRLDRVPAVA |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300049663 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought | Metagenome | Rhizosphere |
| 2 | 2162886007 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 | Metagenome | Rhizosphere |
| 3 | 3300001979 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 | Metagenome | Rhizosphere |
| 4 | 3300002737 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA | Metagenome | Endosphere |
| 5 | 3300002738 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA | Metagenome | Unclassified |
| 6 | 3300003214 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL | Metagenome | Endosphere |
| 7 | 3300003320 | Sugarcane root Sample H2 | Metagenome | Unclassified |
| 8 | 3300003322 | Sugarcane root Sample L2 | Metagenome | Unclassified |
| 9 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 10 | 3300003578 | Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) | Metatranscriptome | Unclassified |
| 11 | 3300003762 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 | Metagenome | Endosphere |
| 12 | 3300005288 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) | Metagenome | Rhizosphere |
| 13 | 3300005289 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) | Metagenome | Rhizosphere |
| 14 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 16 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 17 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 20 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 22 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 23 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 24 | 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Metagenome | Rhizosphere |
| 25 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 26 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 27 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 28 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 29 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 30 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 31 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 32 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 33 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 34 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 35 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 36 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 37 | 3300009036 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG | Metagenome | Rhizosphere |
| 38 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 39 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 40 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 41 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 42 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 43 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 44 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 45 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 46 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 47 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 48 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 49 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 50 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 51 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 52 | 3300014497 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG | Metagenome | Rhizosphere |
| 53 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 54 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 55 | 3300025231 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 56 | 3300025233 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) | Metagenome | Endosphere |
| 57 | 3300025242 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 58 | 3300025246 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) | Metagenome | Unclassified |
| 59 | 3300025254 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 60 | 3300025261 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) | Metagenome | Endosphere |
| 61 | 3300025302 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 62 | 3300025728 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025911 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025937 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300031238 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG | Metagenome | Rhizosphere |
| 83 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 84 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 85 | 3300033541 | Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 86 | 3300035241 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 | Metagenome | Rhizosphere |
| 87 | 3300035398 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 | Metagenome | Rhizosphere |
| 88 | 3300036712 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA | Metagenome | Rhizosphere |
| 89 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 90 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 91 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 92 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 93 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 94 | 3300041407 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 | Metagenome | Rhizosphere |
| 95 | 3300041512 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG | Metagenome | Unclassified |
| 96 | 3300041997 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 | Metagenome | Rhizosphere |
| 97 | 3300042005 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 | Metagenome | Rhizosphere |
| 98 | 3300042012 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 | Metagenome | Rhizosphere |
| 99 | 3300042014 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 | Metagenome | Rhizosphere |
| 100 | 3300042015 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 | Metagenome | Rhizosphere |
| 101 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 102 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 103 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 104 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 105 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 106 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 107 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 108 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 109 | 3300046453 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300046460 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere | Metagenome | Rhizosphere |
| 111 | 3300046558 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300046664 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300046694 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere | Metagenome | Rhizosphere |
| 114 | 3300047318 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere | Metagenome | Rhizosphere |
| 115 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 117 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 118 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 119 | 3300048923 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 | Metagenome | Unclassified |
| 120 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 121 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 122 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 123 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 124 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 125 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 126 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 127 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 128 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 129 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 130 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 131 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 132 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 133 | 3300049705 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought | Metagenome | Rhizosphere |
| 134 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 135 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 136 | 3300053086 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere | Metagenome | Endosphere |
| 137 | 3300053087 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere | Metagenome | Endosphere |
| 138 | 3300053088 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere | Metagenome | Endosphere |
| 139 | 3300053090 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere | Metagenome | Endosphere |
| 140 | 3300053092 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere | Metagenome | Endosphere |
| 141 | 3300053094 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere | Metagenome | Endosphere |
| 142 | 3300053099 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 endosphere | Metagenome | Endosphere |
| 143 | 3300053102 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere | Metagenome | Endosphere |
| 144 | 3300053134 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere | Metagenome | Endosphere |
| 145 | 3300053138 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere | Metagenome | Endosphere |
| 146 | 3300053150 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere | Metagenome | Endosphere |
| 147 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 148 | 3300053156 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere | Metagenome | Endosphere |
| 149 | 3300053160 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere | Metagenome | Endosphere |
| 150 | 3300053161 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere | Metagenome | Endosphere |
| 151 | 3300053727 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere | Metagenome | Endosphere |
| 152 | 3300055283 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere | Metagenome | Endosphere |
| 153 | 3300061719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 | Metagenome | Rhizosphere |
| 154 | 2523533629 | Kaistella palustris DSM 21579 | Isolate | Rhizosphere |
| 155 | 2571042588 | Paenibacillus zanthoxyli JH29 | Isolate | Unclassified |
| 156 | 2585428061 | Chryseobacterium sp. CF356 | Isolate | Rhizosphere |
| 157 | 2585428115 | Chryseobacterium sp. YR561 | Isolate | Rhizosphere |
| 158 | 2585428185 | Chryseobacterium sp. YR459 | Isolate | Rhizosphere |
| 159 | 2643221716 | Flavobacterium sp. Root901 | Isolate | Unclassified |
| 160 | 2721755693 | Paenibacillus polymyxa YC0573 | Isolate | Rhizosphere |
| 161 | 2738541278 | Niastella sp. CF465 | Isolate | Unclassified |
| 162 | 2738541284 | Pedobacter sp. YR016 | Isolate | Unclassified |
| 163 | 2739367656 | Pedobacter sp. CF523 | Isolate | Unclassified |
| 164 | 2739367874 | Chryseobacterium sp. T16E-39 | Isolate | Unclassified |
| 165 | 2881955468 | Edaphocola flava HME-24 | Isolate | Rhizosphere |
| 166 | 2889276214 | Paenibacillus sp. PvR133 | Isolate | Rhizosphere |
| 167 | 2896344016 | Sphingobacterium sp. SGL-16 | Isolate | Rhizosphere |
| 168 | 2919177583 | Sphingobacterium sp. 2149 | Isolate | Rhizosphere |
| 169 | 2929206907 | Paenibacillus sp. R-74146 Hybrid assembly | Isolate | Unclassified |
| 170 | 2929239360 | Chitinophaga sp. R-73072 Hybrid assembly | Isolate | Unclassified |
| 171 | 2929921140 | Chitinophaga sp. R-72609 Hybrid assembly | Isolate | Unclassified |
| 172 | 2980182181 | Paenibacillus cymbidii R196 | Isolate | Unclassified |
| 173 | 2993372514 | Chryseobacterium sp. SLBN-27 | Isolate | Rhizosphere |
| 174 | 2993480792 | Chryseobacterium nepalense SLBN-92 | Isolate | Rhizosphere |
| 175 | 648028048 | Paenibacillus polymyxa E681 | Isolate | Rhizosphere |
| 176 | 8003151029 | Chitinophaga sp. GbtcB8 | Isolate | Unclassified |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 90 |
| Metatranscriptomes | 1.15 |
| Isolates | 8.85 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 12.31 |
| Nodule | 0 |
| Rhizoplane | 0 |
| Rhizosphere | 74.62 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 3.46 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0501223_006550 | 3300049663 | Bacteria | 2404 |
| 2 | SwRhRL2b_contig_320050 | 2162886007 | Bacteria | 3376 |
| 3 | JGI24740J21852_10003136 | 3300001979 | Bacteria | 7293 |
| 4 | JGI25162J39368_1000658 | 3300002737 | Bacteria | 24435 |
| 5 | JGI25154J39366_1000072 | 3300002738 | Bacteria | 93790 |
| 6 | JGI25165J46597_1000818 | 3300003214 | Bacteria | 23376 |
| 7 | rootH2_10029156 | 3300003320 | Bacteria | 5157 |
| 8 | rootL2_10044147 | 3300003322 | Bacteria | 3594 |
| 9 | rootL2_10048221 | 3300003322 | Bacteria | 2714 |
| 10 | rootH1_10016395 | 3300003316 | Bacteria | 5664 |
| 11 | rootH1_10016395 | 3300003323 | Bacteria | 39282 |
| 12 | Ga0006562J51391_1025319 | 3300003578 | Bacteria | 1260 |
| 13 | Ga0055542_1004886 | 3300003762 | Bacteria | 3131 |
| 14 | Ga0065714_10002854 | 3300005288 | Bacteria | 10156 |
| 15 | Ga0065714_10009408 | 3300005288 | Bacteria | 2318 |
| 16 | Ga0065704_10070140 | 3300005289 | Bacteria | 482257 |
| 17 | Ga0065704_10071047 | 3300005289 | Bacteria | 13510 |
| 18 | Ga0070658_10015714 | 3300005327 | Bacteria | 6054 |
| 19 | Ga0070658_10028149 | 3300005327 | Bacteria | 4510 |
| 20 | Ga0070658_10079733 | 3300005327 | Bacteria | 2689 |
| 21 | Ga0070683_100083080 | 3300005329 | Bacteria | 3000 |
| 22 | Ga0070680_100000135 | 3300005336 | Bacteria | 44656 |
| 23 | Ga0070680_100075112 | 3300005336 | Bacteria | 2782 |
| 24 | Ga0070660_100022748 | 3300005339 | Bacteria | 4641 |
| 25 | Ga0070674_100019042 | 3300005356 | Bacteria | 4354 |
| 26 | Ga0070659_100128994 | 3300005366 | Bacteria | 2052 |
| 27 | Ga0070663_100000285 | 3300005455 | Bacteria | 25745 |
| 28 | Ga0070663_100077263 | 3300005455 | Bacteria | 2437 |
| 29 | Ga0070681_10000020 | 3300005458 | Bacteria | 123918 |
| 30 | Ga0070681_10146217 | 3300005458 | Bacteria | 2293 |
| 31 | Ga0070706_100005100 | 3300005467 | Bacteria | 12535 |
| 32 | Ga0070698_100004184 | 3300005471 | Bacteria | 15854 |
| 33 | Ga0070698_100092025 | 3300005471 | Bacteria | 3014 |
| 34 | Ga0070699_100002147 | 3300005518 | Bacteria | 17849 |
| 35 | Ga0070679_100000044 | 3300005530 | Bacteria | 94029 |
| 36 | Ga0070679_100009561 | 3300005530 | Bacteria | 9170 |
| 37 | Ga0070679_100048350 | 3300005530 | Bacteria | 4238 |
| 38 | Ga0070679_100133122 | 3300005530 | Bacteria | 2467 |
| 39 | Ga0070679_100166798 | 3300005530 | Bacteria | 2175 |
| 40 | Ga0068853_100012304 | 3300005539 | Bacteria | 6959 |
| 41 | Ga0068855_100005474 | 3300005563 | Bacteria | 15494 |
| 42 | Ga0068855_100037743 | 3300005563 | Bacteria | 5742 |
| 43 | Ga0068857_100015312 | 3300005577 | Bacteria | 6695 |
| 44 | Ga0068857_100099098 | 3300005577 | Bacteria | 2614 |
| 45 | Ga0068854_100000306 | 3300005578 | Bacteria | 32300 |
| 46 | Ga0068856_100034485 | 3300005614 | Bacteria | 4957 |
| 47 | Ga0068852_100004212 | 3300005616 | Bacteria | 10145 |
| 48 | Ga0068852_100299809 | 3300005616 | Unclassified | 1555 |
| 49 | Ga0068859_100021127 | 3300005617 | Bacteria | 6532 |
| 50 | Ga0070717_10081666 | 3300006028 | Bacteria | 2714 |
| 51 | Ga0097621_100005321 | 3300006237 | Bacteria | 9065 |
| 52 | Ga0097621_100029713 | 3300006237 | Bacteria | 4319 |
| 53 | Ga0068871_100000761 | 3300006358 | Bacteria | 21702 |
| 54 | Ga0068871_100097635 | 3300006358 | Bacteria | 2456 |
| 55 | Ga0097620_100021126 | 3300006931 | Bacteria | 6532 |
| 56 | Ga0105244_10000027 | 3300009036 | Bacteria | 207569 |
| 57 | Ga0105240_10000047 | 3300009093 | Bacteria | 239067 |
| 58 | Ga0105241_10017286 | 3300009174 | Bacteria | 5299 |
| 59 | Ga0105241_10044542 | 3300009174 | Bacteria | 3362 |
| 60 | Ga0105237_10006559 | 3300009545 | Bacteria | 12873 |
| 61 | Ga0105238_10027863 | 3300009551 | Bacteria | 5757 |
| 62 | Ga0105239_10001231 | 3300010375 | Bacteria | 34884 |
| 63 | Ga0105239_10002112 | 3300010375 | Bacteria | 25661 |
| 64 | Ga0105239_10003483 | 3300010375 | Bacteria | 19261 |
| 65 | Ga0105239_10088624 | 3300010375 | Unclassified | 3412 |
| 66 | Ga0157373_10000066 | 3300013100 | Bacteria | 92922 |
| 67 | Ga0157373_10002808 | 3300013100 | Bacteria | 13172 |
| 68 | Ga0157371_10000521 | 3300013102 | Bacteria | 45906 |
| 69 | Ga0157371_10010111 | 3300013102 | Bacteria | 7374 |
| 70 | Ga0157371_10011631 | 3300013102 | Bacteria | 6765 |
| 71 | Ga0157371_10021551 | 3300013102 | Bacteria | 4730 |
| 72 | Ga0157371_10056157 | 3300013102 | Bacteria | 2793 |
| 73 | Ga0157371_10083823 | 3300013102 | Bacteria | 2257 |
| 74 | Ga0157371_10172270 | 3300013102 | Bacteria | 1547 |
| 75 | Ga0157370_10000468 | 3300013104 | Bacteria | 50304 |
| 76 | Ga0157370_10000885 | 3300013104 | Bacteria | 38082 |
| 77 | Ga0157370_10002335 | 3300013104 | Bacteria | 22936 |
| 78 | Ga0157369_10012997 | 3300013105 | Bacteria | 9432 |
| 79 | Ga0157369_10047590 | 3300013105 | Bacteria | 4655 |
| 80 | Ga0157374_10003522 | 3300013296 | Bacteria | 13165 |
| 81 | Ga0157378_10019444 | 3300013297 | Bacteria | 5971 |
| 82 | Ga0163162_10129628 | 3300013306 | Bacteria | 2630 |
| 83 | Ga0157372_10048145 | 3300013307 | Bacteria | 4738 |
| 84 | Ga0157372_10108585 | 3300013307 | Bacteria | 3176 |
| 85 | Ga0157372_10125306 | 3300013307 | Bacteria | 2953 |
| 86 | Ga0157375_10024595 | 3300013308 | Bacteria | 5577 |
| 87 | Ga0157375_10449953 | 3300013308 | Unclassified | 1453 |
| 88 | Ga0182008_10000022 | 3300014497 | Bacteria | 207052 |
| 89 | Ga0182008_10000054 | 3300014497 | Bacteria | 102738 |
| 90 | Ga0157379_10017805 | 3300014968 | Bacteria | 6259 |
| 91 | Ga0163161_10005519 | 3300017792 | Bacteria | 8763 |
| 92 | Ga0207427_100641 | 3300025231 | Bacteria | 16945 |
| 93 | Ga0209437_100164 | 3300025233 | Bacteria | 145317 |
| 94 | Ga0209258_100228 | 3300025242 | Bacteria | 105712 |
| 95 | Ga0209646_1000037 | 3300025246 | Bacteria | 355116 |
| 96 | Ga0209646_1001350 | 3300025246 | Bacteria | 6772 |
| 97 | Ga0209148_1000074 | 3300025254 | Bacteria | 314356 |
| 98 | Ga0209148_1000204 | 3300025254 | Bacteria | 105778 |
| 99 | Ga0209233_1000242 | 3300025261 | Bacteria | 90301 |
| 100 | Ga0207426_1000193 | 3300025302 | Bacteria | 151669 |
| 101 | Ga0207655_1000038 | 3300025728 | Bacteria | 348340 |
| 102 | Ga0207705_10009118 | 3300025909 | Bacteria | 7232 |
| 103 | Ga0207705_10018929 | 3300025909 | Unclassified | 4924 |
| 104 | Ga0207705_10043030 | 3300025909 | Bacteria | 3243 |
| 105 | Ga0207684_10000590 | 3300025910 | Bacteria | 43699 |
| 106 | Ga0207654_10018116 | 3300025911 | Bacteria | 3691 |
| 107 | Ga0207707_10000090 | 3300025912 | Bacteria | 90918 |
| 108 | Ga0207707_10146866 | 3300025912 | Bacteria | 2062 |
| 109 | Ga0207695_10000010 | 3300025913 | Bacteria | 981919 |
| 110 | Ga0207671_10277694 | 3300025914 | Unclassified | 1321 |
| 111 | Ga0207693_10038659 | 3300025915 | Bacteria | 3756 |
| 112 | Ga0207660_10000219 | 3300025917 | Bacteria | 36887 |
| 113 | Ga0207660_10049134 | 3300025917 | Bacteria | 2988 |
| 114 | Ga0207657_10033639 | 3300025919 | Bacteria | 4618 |
| 115 | Ga0207652_10000485 | 3300025921 | Bacteria | 40829 |
| 116 | Ga0207652_10006063 | 3300025921 | Bacteria | 9783 |
| 117 | Ga0207652_10007759 | 3300025921 | Bacteria | 8620 |
| 118 | Ga0207694_10047938 | 3300025924 | Unclassified | 3305 |
| 119 | Ga0207669_10068634 | 3300025937 | Bacteria | 2215 |
| 120 | Ga0207667_10008168 | 3300025949 | Bacteria | 12457 |
| 121 | Ga0207667_10011372 | 3300025949 | Bacteria | 10351 |
| 122 | Ga0207640_10000139 | 3300025981 | Bacteria | 53517 |
| 123 | Ga0207639_10013737 | 3300026041 | Bacteria | 5678 |
| 124 | Ga0207678_10003413 | 3300026067 | Bacteria | 14300 |
| 125 | Ga0207678_10091853 | 3300026067 | Bacteria | 2595 |
| 126 | Ga0207641_10032376 | 3300026088 | Bacteria | 4341 |
| 127 | Ga0207676_10287638 | 3300026095 | Bacteria | 1495 |
| 128 | Ga0207674_10015685 | 3300026116 | Bacteria | 8315 |
| 129 | Ga0207674_10169738 | 3300026116 | Bacteria | 2135 |
| 130 | Ga0265332_10011212 | 3300031238 | Bacteria | 3984 |
| 131 | Ga0307513_10036869 | 3300031456 | Bacteria | 5447 |
| 132 | Ga0307414_10000074 | 3300032004 | Bacteria | 94049 |
| 133 | Ga0307414_10001539 | 3300032004 | Bacteria | 11997 |
| 134 | Ga0307414_10090395 | 3300032004 | Bacteria | 2272 |
| 135 | Ga0316596_1001156 | 3300033541 | Bacteria | 5174 |
| 136 | Ga0316596_1007832 | 3300033541 | Bacteria | 2531 |
| 137 | Ga0373961_0000146 | 3300035241 | Bacteria | 34486 |
| 138 | Ga0316574_0119341 | 3300035398 | Unclassified | 1693 |
| 139 | Ga0316584_0040471 | 3300036712 | Bacteria | 3472 |
| 140 | Ga0395899_0002461 | 3300037312 | Bacteria | 15037 |
| 141 | Ga0395899_0004476 | 3300037312 | Bacteria | 10894 |
| 142 | Ga0395899_0007268 | 3300037312 | Bacteria | 8567 |
| 143 | Ga0395899_0147569 | 3300037312 | Bacteria | 1669 |
| 144 | Ga0395900_0003049 | 3300037418 | Bacteria | 18243 |
| 145 | Ga0395900_0004065 | 3300037418 | Bacteria | 15601 |
| 146 | Ga0395900_0010294 | 3300037418 | Bacteria | 9568 |
| 147 | Ga0395900_0057487 | 3300037418 | Bacteria | 4005 |
| 148 | Ga0395900_0155992 | 3300037418 | Bacteria | 2331 |
| 149 | Ga0395898_0004370 | 3300037466 | Bacteria | 15465 |
| 150 | Ga0395898_0014871 | 3300037466 | Bacteria | 7989 |
| 151 | Ga0395898_0036392 | 3300037466 | Bacteria | 4887 |
| 152 | Ga0395905_0067588 | 3300037471 | Bacteria | 3348 |
| 153 | Ga0395901_0002880 | 3300038443 | Bacteria | 17364 |
| 154 | Ga0395901_0028538 | 3300038443 | Bacteria | 5739 |
| 155 | Ga0395901_0356344 | 3300038443 | Bacteria | 1509 |
| 156 | Ga0395901_0454203 | 3300038443 | Bacteria | 1310 |
| 157 | Ga0439447_000820 | 3300041407 | Bacteria | 11391 |
| 158 | Ga0451853_1521946 | 3300041512 | Bacteria | 1504 |
| 159 | Ga0439431_0009928 | 3300041997 | Bacteria | 2155 |
| 160 | Ga0439448_0003134 | 3300042005 | Bacteria | 4560 |
| 161 | Ga0439455_0035082 | 3300042012 | Bacteria | 1264 |
| 162 | Ga0439457_001988 | 3300042014 | Bacteria | 6007 |
| 163 | Ga0439462_0014364 | 3300042015 | Bacteria | 2034 |
| 164 | Ga0451577_0065382 | 3300042876 | Bacteria | 3244 |
| 165 | Ga0451577_0160299 | 3300042876 | Bacteria | 2026 |
| 166 | Ga0466969_0000823 | 3300044656 | Bacteria | 16860 |
| 167 | Ga0466972_0017804 | 3300044658 | Bacteria | 3555 |
| 168 | Ga0466972_0021762 | 3300044658 | Bacteria | 3195 |
| 169 | Ga0466966_0004102 | 3300044684 | Bacteria | 9617 |
| 170 | Ga0453684_0008476 | 3300044712 | Bacteria | 18390 |
| 171 | Ga0453684_0024952 | 3300044712 | Bacteria | 8702 |
| 172 | Ga0453684_0040467 | 3300044712 | Bacteria | 6328 |
| 173 | Ga0453684_0059976 | 3300044712 | Bacteria | 4899 |
| 174 | Ga0466970_0030942 | 3300044765 | Bacteria | 2825 |
| 175 | Ga0466959_0000411 | 3300045049 | Bacteria | 25084 |
| 176 | Ga0466959_0108487 | 3300045049 | Bacteria | 1983 |
| 177 | Ga0451576_0034322 | 3300045051 | Bacteria | 5389 |
| 178 | Ga0451576_0090038 | 3300045051 | Bacteria | 3191 |
| 179 | Ga0451576_0230196 | 3300045051 | Bacteria | 1936 |
| 180 | Ga0495627_000002 | 3300046453 | Bacteria | 903861 |
| 181 | Ga0495638_0141449 | 3300046460 | Bacteria | 1404 |
| 182 | Ga0495633_0000003 | 3300046558 | Bacteria | 472476 |
| 183 | Ga0495633_0047962 | 3300046558 | Unclassified | 2018 |
| 184 | Ga0495659_0000181 | 3300046664 | Bacteria | 27634 |
| 185 | Ga0495649_0092105 | 3300046694 | Bacteria | 1615 |
| 186 | Ga0495636_0000006 | 3300047318 | Bacteria | 107323 |
| 187 | Ga0495686_0001702 | 3300047472 | Bacteria | 22722 |
| 188 | Ga0496116_0000424 | 3300048919 | Bacteria | 59482 |
| 189 | Ga0496116_0006875 | 3300048919 | Bacteria | 10218 |
| 190 | Ga0496118_0015278 | 3300048921 | Bacteria | 7119 |
| 191 | Ga0496119_0012101 | 3300048922 | Bacteria | 7048 |
| 192 | Ga0496119_0025507 | 3300048922 | Bacteria | 4127 |
| 193 | Ga0496120_0016980 | 3300048923 | Bacteria | 4734 |
| 194 | Ga0496121_0007272 | 3300048924 | Bacteria | 13401 |
| 195 | Ga0496121_0028150 | 3300048924 | Bacteria | 5238 |
| 196 | Ga0496122_0001862 | 3300048925 | Bacteria | 32157 |
| 197 | Ga0496122_0034351 | 3300048925 | Bacteria | 4151 |
| 198 | Ga0496124_0109883 | 3300048927 | Bacteria | 2221 |
| 199 | Ga0496125_0000697 | 3300048928 | Bacteria | 55480 |
| 200 | Ga0496126_0014950 | 3300048929 | Bacteria | 7826 |
| 201 | Ga0501032_0158477 | 3300049569 | Bacteria | 1486 |
| 202 | Ga0501034_0000981 | 3300049571 | Bacteria | 41010 |
| 203 | Ga0501034_0015938 | 3300049571 | Bacteria | 7714 |
| 204 | Ga0501034_0231725 | 3300049571 | Bacteria | 1795 |
| 205 | Ga0501036_0152033 | 3300049572 | Bacteria | 1952 |
| 206 | Ga0501037_0059800 | 3300049573 | Bacteria | 2779 |
| 207 | Ga0501039_0138615 | 3300049575 | Bacteria | 1910 |
| 208 | Ga0501043_0187743 | 3300049579 | Bacteria | 1608 |
| 209 | Ga0501047_0208477 | 3300049581 | Bacteria | 1813 |
| 210 | Ga0501073_0143903 | 3300049589 | Bacteria | 1652 |
| 211 | Ga0501225_0000359 | 3300049705 | Bacteria | 14353 |
| 212 | Ga0501035_0079547 | 3300049822 | Bacteria | 2896 |
| 213 | Ga0501044_0004633 | 3300049823 | Bacteria | 15394 |
| 214 | Ga0501044_0098876 | 3300049823 | Bacteria | 2937 |
| 215 | Ga0501044_0179459 | 3300049823 | Bacteria | 2085 |
| 216 | Ga0500578_0000554 | 3300053086 | Bacteria | 45443 |
| 217 | Ga0500578_0043773 | 3300053086 | Bacteria | 2874 |
| 218 | Ga0500578_0135065 | 3300053086 | Unclassified | 1545 |
| 219 | Ga0500643_019216 | 3300053087 | Bacteria | 2254 |
| 220 | Ga0500644_0000437 | 3300053088 | Bacteria | 19264 |
| 221 | Ga0500646_0001962 | 3300053090 | Bacteria | 5377 |
| 222 | Ga0500646_0002298 | 3300053090 | Bacteria | 4977 |
| 223 | Ga0500646_0015198 | 3300053090 | Bacteria | 2004 |
| 224 | Ga0500583_0000028 | 3300053092 | Bacteria | 108276 |
| 225 | Ga0500583_0000425 | 3300053092 | Bacteria | 13360 |
| 226 | Ga0500566_0001847 | 3300053094 | Bacteria | 12458 |
| 227 | Ga0500654_079919 | 3300053099 | Bacteria | 1531 |
| 228 | Ga0500554_041579 | 3300053102 | Bacteria | 1413 |
| 229 | Ga0500658_0000002 | 3300053134 | Bacteria | 548440 |
| 230 | Ga0500564_060324 | 3300053138 | Bacteria | 1722 |
| 231 | Ga0500603_011352 | 3300053150 | Bacteria | 2026 |
| 232 | Ga0500616_0017106 | 3300053153 | Bacteria | 4117 |
| 233 | Ga0500622_0000123 | 3300053156 | Bacteria | 81320 |
| 234 | Ga0500633_0000612 | 3300053160 | Bacteria | 5904 |
| 235 | Ga0500634_0007200 | 3300053161 | Bacteria | 5462 |
| 236 | Ga0500611_001717 | 3300053727 | Bacteria | 2481 |
| 237 | Ga0500661_003408 | 3300055283 | Bacteria | 2981 |
| 238 | Ga0466962_0094544 | 3300061719 | Bacteria | 1433 |
| 239 | 2524004991 | 2523533629 | Bacteria | 2982326 |
| 240 | 2573036612 | 2571042588 | Bacteria | 5045676 |
| 241 | 2587751465 | 2585428061 | Bacteria | 3939663 |
| 242 | 2587943974 | 2585428115 | Bacteria | 4420269 |
| 243 | 2588223011 | 2585428185 | Bacteria | 4969476 |
| 244 | 2644643877 | 2643221716 | Bacteria | 4986332 |
| 245 | 2723606321 | 2721755693 | Bacteria | 6126117 |
| 246 | 2738724330 | 2738541278 | Bacteria | 9755573 |
| 247 | 2738763212 | 2738541284 | Bacteria | 5199923 |
| 248 | 2739616935 | 2739367656 | Bacteria | 5152243 |
| 249 | 2740058994 | 2739367874 | Bacteria | 4872888 |
| 250 | 2881958443 | 2881955468 | Bacteria | 3545609 |
| 251 | 2889276871 | 2889276214 | Bacteria | 5979355 |
| 252 | 2896344688 | 2896344016 | Bacteria | 3811746 |
| 253 | 2919178248 | 2919177583 | Bacteria | 5641607 |
| 254 | 2929210924 | 2929206907 | Bacteria | 5918291 |
| 255 | 2929244005 | 2929239360 | Bacteria | 7745570 |
| 256 | 2929925998 | 2929921140 | Bacteria | 8649150 |
| 257 | 2980190036 | 2980182181 | Bacteria | 9454109 |
| 258 | 2993373800 | 2993372514 | Bacteria | 4214139 |
| 259 | 2993484477 | 2993480792 | Bacteria | 4022225 |
| 260 | 648172311 | 648028048 | Bacteria | 5394884 |
| 261 | 8003153046 | 8003151029 | Bacteria | 8187759 |
| 262 | Ga0501223_006550 | |||
| 263 | SwRhRL2b_contig_320050 | |||
| 264 | JGI24740J21852_10003136 | |||
| 265 | JGI25162J39368_1000658 | |||
| 266 | JGI25154J39366_1000072 | |||
| 267 | JGI25165J46597_1000818 | |||
| 268 | rootH2_10029156 | |||
| 269 | rootL2_10044147 | |||
| 270 | rootL2_10048221 | |||
| 271 | rootH1_10016395 | |||
| 272 | Ga0006562J51391_1025319 | |||
| 273 | Ga0055542_1004886 | |||
| 274 | Ga0065714_10002854 | |||
| 275 | Ga0065714_10009408 | |||
| 276 | Ga0065704_10070140 | |||
| 277 | Ga0065704_10071047 | |||
| 278 | Ga0070658_10015714 | |||
| 279 | Ga0070658_10028149 | |||
| 280 | Ga0070658_10079733 | |||
| 281 | Ga0070683_100083080 | |||
| 282 | Ga0070680_100000135 | |||
| 283 | Ga0070680_100075112 | |||
| 284 | Ga0070660_100022748 | |||
| 285 | Ga0070674_100019042 | |||
| 286 | Ga0070659_100128994 | |||
| 287 | Ga0070663_100000285 | |||
| 288 | Ga0070663_100077263 | |||
| 289 | Ga0070681_10000020 | |||
| 290 | Ga0070681_10146217 | |||
| 291 | Ga0070706_100005100 | |||
| 292 | Ga0070698_100004184 | |||
| 293 | Ga0070698_100092025 | |||
| 294 | Ga0070699_100002147 | |||
| 295 | Ga0070679_100000044 | |||
| 296 | Ga0070679_100009561 | |||
| 297 | Ga0070679_100048350 | |||
| 298 | Ga0070679_100133122 | |||
| 299 | Ga0070679_100166798 | |||
| 300 | Ga0068853_100012304 | |||
| 301 | Ga0068855_100005474 | |||
| 302 | Ga0068855_100037743 | |||
| 303 | Ga0068857_100015312 | |||
| 304 | Ga0068857_100099098 | |||
| 305 | Ga0068854_100000306 | |||
| 306 | Ga0068856_100034485 | |||
| 307 | Ga0068852_100004212 | |||
| 308 | Ga0068852_100299809 | |||
| 309 | Ga0068859_100021127 | |||
| 310 | Ga0070717_10081666 | |||
| 311 | Ga0097621_100005321 | |||
| 312 | Ga0097621_100029713 | |||
| 313 | Ga0068871_100000761 | |||
| 314 | Ga0068871_100097635 | |||
| 315 | Ga0097620_100021126 | |||
| 316 | Ga0105244_10000027 | |||
| 317 | Ga0105240_10000047 | |||
| 318 | Ga0105241_10017286 | |||
| 319 | Ga0105241_10044542 | |||
| 320 | Ga0105237_10006559 | |||
| 321 | Ga0105238_10027863 | |||
| 322 | Ga0105239_10001231 | |||
| 323 | Ga0105239_10002112 | |||
| 324 | Ga0105239_10003483 | |||
| 325 | Ga0105239_10088624 | |||
| 326 | Ga0157373_10000066 | |||
| 327 | Ga0157373_10002808 | |||
| 328 | Ga0157371_10000521 | |||
| 329 | Ga0157371_10010111 | |||
| 330 | Ga0157371_10011631 | |||
| 331 | Ga0157371_10021551 | |||
| 332 | Ga0157371_10056157 | |||
| 333 | Ga0157371_10083823 | |||
| 334 | Ga0157371_10172270 | |||
| 335 | Ga0157370_10000468 | |||
| 336 | Ga0157370_10000885 | |||
| 337 | Ga0157370_10002335 | |||
| 338 | Ga0157369_10012997 | |||
| 339 | Ga0157369_10047590 | |||
| 340 | Ga0157374_10003522 | |||
| 341 | Ga0157378_10019444 | |||
| 342 | Ga0163162_10129628 | |||
| 343 | Ga0157372_10048145 | |||
| 344 | Ga0157372_10108585 | |||
| 345 | Ga0157372_10125306 | |||
| 346 | Ga0157375_10024595 | |||
| 347 | Ga0157375_10449953 | |||
| 348 | Ga0182008_10000022 | |||
| 349 | Ga0182008_10000054 | |||
| 350 | Ga0157379_10017805 | |||
| 351 | Ga0163161_10005519 | |||
| 352 | Ga0207427_100641 | |||
| 353 | Ga0209437_100164 | |||
| 354 | Ga0209258_100228 | |||
| 355 | Ga0209646_1000037 | |||
| 356 | Ga0209646_1001350 | |||
| 357 | Ga0209148_1000074 | |||
| 358 | Ga0209148_1000204 | |||
| 359 | Ga0209233_1000242 | |||
| 360 | Ga0207426_1000193 | |||
| 361 | Ga0207655_1000038 | |||
| 362 | Ga0207705_10009118 | |||
| 363 | Ga0207705_10018929 | |||
| 364 | Ga0207705_10043030 | |||
| 365 | Ga0207684_10000590 | |||
| 366 | Ga0207654_10018116 | |||
| 367 | Ga0207707_10000090 | |||
| 368 | Ga0207707_10146866 | |||
| 369 | Ga0207695_10000010 | |||
| 370 | Ga0207671_10277694 | |||
| 371 | Ga0207693_10038659 | |||
| 372 | Ga0207660_10000219 | |||
| 373 | Ga0207660_10049134 | |||
| 374 | Ga0207657_10033639 | |||
| 375 | Ga0207652_10000485 | |||
| 376 | Ga0207652_10006063 | |||
| 377 | Ga0207652_10007759 | |||
| 378 | Ga0207694_10047938 | |||
| 379 | Ga0207669_10068634 | |||
| 380 | Ga0207667_10008168 | |||
| 381 | Ga0207667_10011372 | |||
| 382 | Ga0207640_10000139 | |||
| 383 | Ga0207639_10013737 | |||
| 384 | Ga0207678_10003413 | |||
| 385 | Ga0207678_10091853 | |||
| 386 | Ga0207641_10032376 | |||
| 387 | Ga0207676_10287638 | |||
| 388 | Ga0207674_10015685 | |||
| 389 | Ga0207674_10169738 | |||
| 390 | Ga0265332_10011212 | |||
| 391 | Ga0307513_10036869 | |||
| 392 | Ga0307414_10000074 | |||
| 393 | Ga0307414_10001539 | |||
| 394 | Ga0307414_10090395 | |||
| 395 | Ga0316596_1001156 | |||
| 396 | Ga0316596_1007832 | |||
| 397 | Ga0373961_0000146 | |||
| 398 | Ga0316574_0119341 | |||
| 399 | Ga0316584_0040471 | |||
| 400 | Ga0395899_0002461 | |||
| 401 | Ga0395899_0004476 | |||
| 402 | Ga0395899_0007268 | |||
| 403 | Ga0395899_0147569 | |||
| 404 | Ga0395900_0003049 | |||
| 405 | Ga0395900_0004065 | |||
| 406 | Ga0395900_0010294 | |||
| 407 | Ga0395900_0057487 | |||
| 408 | Ga0395900_0155992 | |||
| 409 | Ga0395898_0004370 | |||
| 410 | Ga0395898_0014871 | |||
| 411 | Ga0395898_0036392 | |||
| 412 | Ga0395905_0067588 | |||
| 413 | Ga0395901_0002880 | |||
| 414 | Ga0395901_0028538 | |||
| 415 | Ga0395901_0356344 | |||
| 416 | Ga0395901_0454203 | |||
| 417 | Ga0439447_000820 | |||
| 418 | Ga0451853_1521946 | |||
| 419 | Ga0439431_0009928 | |||
| 420 | Ga0439448_0003134 | |||
| 421 | Ga0439455_0035082 | |||
| 422 | Ga0439457_001988 | |||
| 423 | Ga0439462_0014364 | |||
| 424 | Ga0451577_0065382 | |||
| 425 | Ga0451577_0160299 | |||
| 426 | Ga0466969_0000823 | |||
| 427 | Ga0466972_0017804 | |||
| 428 | Ga0466972_0021762 | |||
| 429 | Ga0466966_0004102 | |||
| 430 | Ga0453684_0008476 | |||
| 431 | Ga0453684_0024952 | |||
| 432 | Ga0453684_0040467 | |||
| 433 | Ga0453684_0059976 | |||
| 434 | Ga0466970_0030942 | |||
| 435 | Ga0466959_0000411 | |||
| 436 | Ga0466959_0108487 | |||
| 437 | Ga0451576_0034322 | |||
| 438 | Ga0451576_0090038 | |||
| 439 | Ga0451576_0230196 | |||
| 440 | Ga0495627_000002 | |||
| 441 | Ga0495638_0141449 | |||
| 442 | Ga0495633_0000003 | |||
| 443 | Ga0495633_0047962 | |||
| 444 | Ga0495659_0000181 | |||
| 445 | Ga0495649_0092105 | |||
| 446 | Ga0495636_0000006 | |||
| 447 | Ga0495686_0001702 | |||
| 448 | Ga0496116_0000424 | |||
| 449 | Ga0496116_0006875 | |||
| 450 | Ga0496118_0015278 | |||
| 451 | Ga0496119_0012101 | |||
| 452 | Ga0496119_0025507 | |||
| 453 | Ga0496120_0016980 | |||
| 454 | Ga0496121_0007272 | |||
| 455 | Ga0496121_0028150 | |||
| 456 | Ga0496122_0001862 | |||
| 457 | Ga0496122_0034351 | |||
| 458 | Ga0496124_0109883 | |||
| 459 | Ga0496125_0000697 | |||
| 460 | Ga0496126_0014950 | |||
| 461 | Ga0501032_0158477 | |||
| 462 | Ga0501034_0000981 | |||
| 463 | Ga0501034_0015938 | |||
| 464 | Ga0501034_0231725 | |||
| 465 | Ga0501036_0152033 | |||
| 466 | Ga0501037_0059800 | |||
| 467 | Ga0501039_0138615 | |||
| 468 | Ga0501043_0187743 | |||
| 469 | Ga0501047_0208477 | |||
| 470 | Ga0501073_0143903 | |||
| 471 | Ga0501225_0000359 | |||
| 472 | Ga0501035_0079547 | |||
| 473 | Ga0501044_0004633 | |||
| 474 | Ga0501044_0098876 | |||
| 475 | Ga0501044_0179459 | |||
| 476 | Ga0500578_0000554 | |||
| 477 | Ga0500578_0043773 | |||
| 478 | Ga0500578_0135065 | |||
| 479 | Ga0500643_019216 | |||
| 480 | Ga0500644_0000437 | |||
| 481 | Ga0500646_0001962 | |||
| 482 | Ga0500646_0002298 | |||
| 483 | Ga0500646_0015198 | |||
| 484 | Ga0500583_0000028 | |||
| 485 | Ga0500583_0000425 | |||
| 486 | Ga0500566_0001847 | |||
| 487 | Ga0500654_079919 | |||
| 488 | Ga0500554_041579 | |||
| 489 | Ga0500658_0000002 | |||
| 490 | Ga0500564_060324 | |||
| 491 | Ga0500603_011352 | |||
| 492 | Ga0500616_0017106 | |||
| 493 | Ga0500622_0000123 | |||
| 494 | Ga0500633_0000612 | |||
| 495 | Ga0500634_0007200 | |||
| 496 | Ga0500611_001717 | |||
| 497 | Ga0500661_003408 | |||
| 498 | Ga0466962_0094544 | |||
| 499 | 2524004991 | |||
| 500 | 2573036612 | |||
| 501 | 2587751465 | |||
| 502 | 2587943974 | |||
| 503 | 2588223011 | |||
| 504 | 2644643877 | |||
| 505 | 2723606321 | |||
| 506 | 2738724330 | |||
| 507 | 2738763212 | |||
| 508 | 2739616935 | |||
| 509 | 2740058994 | |||
| 510 | 2881958443 | |||
| 511 | 2889276871 | |||
| 512 | 2896344688 | |||
| 513 | 2919178248 | |||
| 514 | 2929210924 | |||
| 515 | 2929244005 | |||
| 516 | 2929925998 | |||
| 517 | 2980190036 | |||
| 518 | 2993373800 | |||
| 519 | 2993484477 | |||
| 520 | 648172311 | |||
| 521 | 8003153046 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 7b0m-assembly1.cif.gz_AAA-2 | sugar transaminase from a metagenome collected from troll oil field production water | 0.9389 | 1 | 365 |
| 4ztc-assembly1.cif.gz_A-2 | pgle aminotransferase in complex with external aldimine, mutant k184a | 0.924 | 1 | 366 |
| 3bn1-assembly2.cif.gz_C | crystal structure of gdp-perosamine synthase | 0.9236 | 3 | 366 |
| 4oca-assembly1.cif.gz_A-2 | cryatal structure of arnb k188a complexted with plp and udp-ara4n | 0.9217 | 1 | 366 |
| 7b0d-assembly1.cif.gz_B | sugar transaminase from archaeoglobus veneficus | 0.9215 | 4 | 364 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 1o62B01 | Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.9406 | 3 | 240 | 3.40.640.10 |
| 1o62B01 | Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.9366 | 3 | 240 | 3.40.640.10 |
| 3bn1B01 | Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.9327 | 3 | 239 | 3.40.640.10 |
| 4qgrB01 | Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.9264 | 4 | 239 | 3.40.640.10 |
| 2ogeD01 | Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.9159 | 4 | 239 | 3.40.640.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-J0LAA1-F1-model_v4 | DegT/DnrJ/EryC1/StrS aminotransferase | 0.9863 | 1 | 155 |
GO:0000271
GO:0008483 GO:0030170 |
| AF-A0A559RD97-F1-model_v4 | dTDP-4-amino-4,6-dideoxygalactose transaminase | 0.9858 | 1 | 364 |
GO:0000271
GO:0008483 GO:0030170 |
| AF-A0A6L5DE58-F1-model_v4 | deleted | 0.9853 | 1 | 148 |
|
| AF-A0A2W6THS5-F1-model_v4 | Pyridoxal phosphate-dependent aminotransferase | 0.9817 | 108 | 366 |
GO:0000271
GO:0008483 GO:0030170 |
| AF-A0A843JJ44-F1-model_v4 | DegT/DnrJ/EryC1/StrS family aminotransferase | 0.9777 | 3 | 141 |
GO:0000271
GO:0008483 GO:0030170 |