F369936

General Info

Members Datasets Scaffolds Average Seq Length
260 166 520 247

Family's Representative Sequence

Representative Sequence 3300053153|Ga0500616_0020639|Ga0500616_0020639_609_1484
Length 283
Sequence LSLLQHHVLLLLIAVSKALLQYLFPFTLQDKMNETPHTIDTAKITYQLGRLNIATALSVLANEYPGKVTFSTSFSYEDQVITHEILTNNIPISIFTLDTGRLFAETYSVWSNTNEKYQAHIQPYYPQHATLEAFVAEKGPNAFYESVENRKQCCFLRKVEPLKRALAGNAVWITGLRAEHSPDRKDLPVVEWDESNQLIKYHPLLHWTNDEVKQYIRQHNIPYNPLHDKGFVSIGCAPCTRAIRPGEDFRAGRWECGLHVHQETESLEDRKSERPGAIQYIQT

Samples

Sample ID Description Type Environment
1 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
6 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
11 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
12 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
13 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
14 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
15 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
16 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
17 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
18 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
19 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
20 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
21 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
22 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
23 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
24 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
25 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
26 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
27 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
28 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
29 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
30 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
31 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
32 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
33 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
34 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
35 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
36 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
37 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
38 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
39 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
40 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
41 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
42 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
43 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
44 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
45 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
47 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
48 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
49 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
50 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
51 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
52 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
54 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
55 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
56 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
57 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
58 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
59 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
60 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
61 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
62 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
63 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
64 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
65 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
66 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
67 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
68 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
69 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
70 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
71 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
72 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
73 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
74 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
75 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
76 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
111 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
112 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
113 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
114 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
115 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
116 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
117 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
118 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
119 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
120 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
121 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
122 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
123 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
124 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
125 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
126 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
127 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
128 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
129 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
130 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
131 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
132 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
133 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
134 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
135 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
136 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
137 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
138 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
139 3300049523 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control Metagenome Rhizosphere
140 3300049528 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
141 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
142 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
145 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
146 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
147 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
148 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
149 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
150 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
151 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
152 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
153 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
154 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
155 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
156 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
157 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
158 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
159 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
160 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
161 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
162 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
163 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
164 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
165 3300059641 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 9R_AW_T1_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
166 2738541278 Niastella sp. CF465 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.85
Metatranscriptomes 0.77
Isolates 0.38

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.46
Nodule 0
Rhizoplane 0
Rhizosphere 86.54
Stem 0
Stem Tuber 0
Unclassified 1.54

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0500616_0020639 3300053153 Bacteria 3699
2 rootH2_10024559 3300003320 Bacteria 24277
3 rootH1_10023615 3300003323 Bacteria 8427
4 Ga0070658_10060154 3300005327 Bacteria 3093
5 Ga0070676_10135890 3300005328 Bacteria 1560
6 Ga0070690_100022621 3300005330 Bacteria 3847
7 Ga0070670_100233937 3300005331 Bacteria 1599
8 Ga0070670_100529026 3300005331 Bacteria 1050
9 Ga0070666_10083446 3300005335 Bacteria 2186
10 Ga0070666_10087691 3300005335 Bacteria 2133
11 Ga0070680_100096431 3300005336 Bacteria 2452
12 Ga0070682_100165645 3300005337 Bacteria 1531
13 Ga0068868_100280333 3300005338 Bacteria 1410
14 Ga0070689_100123269 3300005340 Bacteria 2072
15 Ga0070668_100244893 3300005347 Bacteria 1486
16 Ga0070669_100094228 3300005353 Bacteria 2250
17 Ga0070669_100192596 3300005353 Bacteria 1600
18 Ga0070675_100037196 3300005354 Bacteria 3964
19 Ga0070671_100007610 3300005355 Bacteria 8664
20 Ga0070673_100019755 3300005364 Bacteria 4844
21 Ga0070673_100029002 3300005364 Bacteria 4122
22 Ga0070667_100025758 3300005367 Bacteria 4891
23 Ga0070667_100030328 3300005367 Bacteria 4510
24 Ga0070667_100187981 3300005367 Bacteria 1829
25 Ga0070701_10008695 3300005438 Bacteria 4407
26 Ga0070662_100176146 3300005457 Bacteria 1683
27 Ga0068867_100240492 3300005459 Bacteria 1468
28 Ga0070685_10148326 3300005466 Bacteria 1484
29 Ga0070699_100612521 3300005518 Bacteria 993
30 Ga0070679_100043146 3300005530 Bacteria 4493
31 Ga0068853_100003264 3300005539 Bacteria 12398
32 Ga0068853_100047870 3300005539 Bacteria 3670
33 Ga0068853_100097851 3300005539 Bacteria 2591
34 Ga0070672_100048561 3300005543 Bacteria 3299
35 Ga0070686_100012921 3300005544 Bacteria 4768
36 Ga0070665_100000009 3300005548 Bacteria 562640
37 Ga0068855_100042936 3300005563 Bacteria 5357
38 Ga0068855_100303844 3300005563 Bacteria 1766
39 Ga0070664_100027319 3300005564 Bacteria 4742
40 Ga0068857_100135980 3300005577 Bacteria 2219
41 Ga0068856_100008185 3300005614 Bacteria 10194
42 Ga0068856_100037562 3300005614 Bacteria 4752
43 Ga0070702_100028921 3300005615 Bacteria 3008
44 Ga0068852_100115547 3300005616 Bacteria 2447
45 Ga0068852_100545394 3300005616 Bacteria 1159
46 Ga0068859_100000012 3300005617 Bacteria 300376
47 Ga0068859_100000859 3300005617 Bacteria 30939
48 Ga0068859_100022454 3300005617 Bacteria 6327
49 Ga0068859_100298408 3300005617 Bacteria 1704
50 Ga0068864_100027991 3300005618 Bacteria 4763
51 Ga0068864_100049799 3300005618 Bacteria 3604
52 Ga0068864_100094240 3300005618 Bacteria 2646
53 Ga0068851_10042344 3300005834 Bacteria 2292
54 Ga0068851_10056759 3300005834 Bacteria 1998
55 Ga0068870_10050722 3300005840 Bacteria 2194
56 Ga0068863_100013238 3300005841 Bacteria 7957
57 Ga0068863_100168498 3300005841 Bacteria 2100
58 Ga0068858_100004166 3300005842 Bacteria 14229
59 Ga0068858_100276114 3300005842 Bacteria 1600
60 Ga0068860_100000033 3300005843 Bacteria 245461
61 Ga0068860_100001094 3300005843 Bacteria 29839
62 Ga0068860_100003278 3300005843 Bacteria 16660
63 Ga0068860_100009501 3300005843 Bacteria 9658
64 Ga0068860_100016656 3300005843 Bacteria 7169
65 Ga0068860_100017849 3300005843 Bacteria 6911
66 Ga0068862_100003222 3300005844 Bacteria 14130
67 Ga0070712_100009021 3300006175 Bacteria 6281
68 Ga0075366_10090333 3300006195 Bacteria 1834
69 Ga0075366_10198232 3300006195 Bacteria 1221
70 Ga0097621_100041865 3300006237 Bacteria 3689
71 Ga0097621_100056177 3300006237 Bacteria 3216
72 Ga0097621_100413636 3300006237 Bacteria 1209
73 Ga0097621_100452523 3300006237 Bacteria 1157
74 Ga0068871_100013362 3300006358 Bacteria 6092
75 Ga0068871_100025489 3300006358 Bacteria 4602
76 Ga0068871_100111155 3300006358 Bacteria 2305
77 Ga0075431_100111926 3300006847 Bacteria 2817
78 Ga0075429_100094024 3300006880 Bacteria 2614
79 Ga0068865_100304900 3300006881 Bacteria 1276
80 Ga0097620_100000012 3300006931 Bacteria 300376
81 Ga0097620_100000859 3300006931 Bacteria 30939
82 Ga0097620_100022453 3300006931 Bacteria 6327
83 Ga0097620_100298400 3300006931 Bacteria 1704
84 Ga0105240_10010077 3300009093 Bacteria 13303
85 Ga0111539_10018274 3300009094 Bacteria 8685
86 Ga0111539_10084628 3300009094 Bacteria 3728
87 Ga0105245_10455736 3300009098 Bacteria 1288
88 Ga0105247_10092119 3300009101 Bacteria 1925
89 Ga0114129_10007165 3300009147 Bacteria 15870
90 Ga0114129_10251609 3300009147 Bacteria 2371
91 Ga0105241_10002077 3300009174 Bacteria 15145
92 Ga0105241_10003136 3300009174 Bacteria 12295
93 Ga0105241_10281188 3300009174 Bacteria 1421
94 Ga0105242_10296265 3300009176 Unclassified 1475
95 Ga0105237_10027180 3300009545 Bacteria 5843
96 Ga0105237_10029212 3300009545 Bacteria 5608
97 Ga0105249_10020127 3300009553 Bacteria 5960
98 Ga0105249_10127468 3300009553 Bacteria 2425
99 Ga0105239_10002925 3300010375 Bacteria 21322
100 Ga0105246_10065182 3300011119 Bacteria 2547
101 Ga0105246_10075505 3300011119 Bacteria 2386
102 Ga0157373_10002837 3300013100 Bacteria 13108
103 Ga0157371_10021599 3300013102 Bacteria 4725
104 Ga0157370_10114782 3300013104 Bacteria 2516
105 Ga0157369_10005338 3300013105 Bacteria 14973
106 Ga0157374_10667942 3300013296 Bacteria 1051
107 Ga0157378_10000557 3300013297 Bacteria 35516
108 Ga0157378_10001550 3300013297 Bacteria 20758
109 Ga0157378_10014367 3300013297 Bacteria 6932
110 Ga0157378_10025884 3300013297 Bacteria 5169
111 Ga0157378_10497658 3300013297 Bacteria 1217
112 Ga0163162_10000282 3300013306 Bacteria 46472
113 Ga0163162_10003354 3300013306 Bacteria 15318
114 Ga0163162_10008682 3300013306 Bacteria 9888
115 Ga0163162_10015373 3300013306 Bacteria 7477
116 Ga0157372_10048595 3300013307 Bacteria 4716
117 Ga0157372_10115882 3300013307 Bacteria 3072
118 Ga0157375_10052755 3300013308 Bacteria 3999
119 Ga0157375_10204064 3300013308 Bacteria 2133
120 Ga0157375_10210780 3300013308 Bacteria 2100
121 Ga0157375_10245387 3300013308 Bacteria 1951
122 Ga0157375_10601626 3300013308 Bacteria 1259
123 Ga0163163_10108894 3300014325 Bacteria 2798
124 Ga0157379_10092262 3300014968 Bacteria 2717
125 Ga0157379_10124531 3300014968 Bacteria 2319
126 Ga0157376_10061207 3300014969 Bacteria 3164
127 Ga0157376_10185315 3300014969 Bacteria 1905
128 Ga0157376_10216647 3300014969 Bacteria 1771
129 Ga0163161_10010665 3300017792 Bacteria 6363
130 Ga0209646_1001484 3300025246 Bacteria 6242
131 Ga0207656_10004847 3300025321 Bacteria 4725
132 Ga0207710_10127235 3300025900 Bacteria 1221
133 Ga0207680_10000515 3300025903 Bacteria 18445
134 Ga0207680_10068647 3300025903 Bacteria 2187
135 Ga0207680_10084259 3300025903 Bacteria 2005
136 Ga0207645_10017986 3300025907 Bacteria 4660
137 Ga0207645_10086368 3300025907 Bacteria 2016
138 Ga0207705_10028614 3300025909 Bacteria 3972
139 Ga0207654_10003719 3300025911 Bacteria 7701
140 Ga0207695_10084540 3300025913 Bacteria 3204
141 Ga0207671_10011769 3300025914 Bacteria 7086
142 Ga0207671_10159579 3300025914 Bacteria 1746
143 Ga0207662_10015036 3300025918 Bacteria 4348
144 Ga0207652_10015459 3300025921 Bacteria 6204
145 Ga0207681_10124972 3300025923 Bacteria 1893
146 Ga0207650_10109923 3300025925 Bacteria 2132
147 Ga0207650_10248796 3300025925 Bacteria 1439
148 Ga0207650_10590064 3300025925 Bacteria 934
149 Ga0207659_10122765 3300025926 Bacteria 1993
150 Ga0207644_10049779 3300025931 Bacteria 3001
151 Ga0207665_10413273 3300025939 Bacteria 1029
152 Ga0207691_10130244 3300025940 Bacteria 2223
153 Ga0207691_10297379 3300025940 Bacteria 1387
154 Ga0207679_10077962 3300025945 Bacteria 2523
155 Ga0207667_10003319 3300025949 Bacteria 19860
156 Ga0207667_10339642 3300025949 Bacteria 1533
157 Ga0207651_10303465 3300025960 Bacteria 1328
158 Ga0207712_10054799 3300025961 Bacteria 2802
159 Ga0207712_10218457 3300025961 Bacteria 1522
160 Ga0207668_10077815 3300025972 Bacteria 2393
161 Ga0207658_10018296 3300025986 Bacteria 4837
162 Ga0207658_10033261 3300025986 Bacteria 3677
163 Ga0207658_10067976 3300025986 Bacteria 2686
164 Ga0207658_10121882 3300025986 Bacteria 2081
165 Ga0207639_10024604 3300026041 Unclassified 4360
166 Ga0207639_10068456 3300026041 Bacteria 2766
167 Ga0207639_10070214 3300026041 Bacteria 2735
168 Ga0207639_10774914 3300026041 Bacteria 893
169 Ga0207708_10367694 3300026075 Bacteria 1183
170 Ga0207702_10006520 3300026078 Bacteria 10041
171 Ga0207702_10047672 3300026078 Bacteria 3611
172 Ga0207641_10001539 3300026088 Bacteria 22567
173 Ga0207648_10103440 3300026089 Bacteria 2497
174 Ga0207648_10349510 3300026089 Bacteria 1333
175 Ga0207676_10129594 3300026095 Bacteria 2142
176 Ga0207676_10618271 3300026095 Bacteria 1042
177 Ga0207675_100285064 3300026118 Bacteria 1606
178 Ga0207675_100301254 3300026118 Bacteria 1561
179 Ga0207683_10075229 3300026121 Unclassified 2989
180 Ga0207698_10090475 3300026142 Bacteria 2503
181 Ga0207698_10441536 3300026142 Bacteria 1254
182 Ga0268266_10000014 3300028379 Bacteria 644033
183 Ga0268265_10304484 3300028380 Bacteria 1436
184 Ga0268264_10000013 3300028381 Bacteria 513859
185 Ga0268264_10001722 3300028381 Bacteria 20135
186 Ga0268264_10002806 3300028381 Bacteria 15215
187 Ga0268264_10010077 3300028381 Bacteria 7823
188 Ga0268264_10010214 3300028381 Bacteria 7770
189 Ga0268264_10011744 3300028381 Bacteria 7222
190 Ga0307515_10000010 3300028794 Bacteria 651586
191 Ga0307515_10000039 3300028794 Bacteria 323229
192 Ga0265332_10124191 3300031238 Bacteria 1084
193 Ga0307513_10165546 3300031456 Bacteria 2096
194 Ga0307513_10194455 3300031456 Bacteria 1876
195 Ga0307513_10317355 3300031456 Bacteria 1318
196 Ga0307509_10107516 3300031507 Bacteria 2805
197 Ga0307509_10267622 3300031507 Bacteria 1479
198 Ga0307508_10382811 3300031616 Bacteria 998
199 Ga0307416_100245969 3300032002 Bacteria 1737
200 Ga0395899_0273792 3300037312 Bacteria 1151
201 Ga0395905_0028527 3300037471 Bacteria 5261
202 Ga0439436_0000413 3300041404 Bacteria 10744
203 Ga0439439_0011260 3300041406 Bacteria 2151
204 Ga0439439_0017625 3300041406 Bacteria 1758
205 Ga0451841_0373863 3300041498 Bacteria 989
206 Ga0439449_0037016 3300042007 Bacteria 1815
207 Ga0439457_003832 3300042014 Bacteria 4030
208 Ga0439462_0028262 3300042015 Bacteria 1482
209 Ga0451577_0334818 3300042876 Unclassified 1373
210 Ga0466969_0004123 3300044656 Bacteria 7712
211 Ga0466972_0000104 3300044658 Bacteria 73886
212 Ga0466972_0062493 3300044658 Bacteria 1784
213 Ga0466966_0000193 3300044684 Bacteria 40730
214 Ga0453684_0610719 3300044712 Bacteria 1194
215 Ga0466957_0001943 3300044842 Bacteria 10977
216 Ga0466959_0002486 3300045049 Bacteria 11803
217 Ga0495650_0047341 3300046471 Bacteria 1799
218 Ga0495632_0051352 3300046519 Bacteria 2030
219 Ga0495648_0001328 3300046524 Bacteria 24502
220 Ga0495609_0195499 3300046538 Bacteria 847
221 Ga0495668_0002342 3300046616 Bacteria 15781
222 Ga0495611_0024445 3300046648 Bacteria 2628
223 Ga0495625_0147530 3300046660 Bacteria 1583
224 Ga0495687_000106 3300047443 Bacteria 128130
225 Ga0501300_000732 3300049523 Bacteria 4932
226 Ga0501312_044965 3300049528 Bacteria 731
227 Ga0501033_0031966 3300049570 Bacteria 3951
228 Ga0501034_0005007 3300049571 Bacteria 14572
229 Ga0501047_0067097 3300049581 Bacteria 3458
230 Ga0501047_0601434 3300049581 Bacteria 921
231 Ga0501048_0363335 3300049582 Bacteria 1033
232 Ga0501235_027344 3300049669 Bacteria 1279
233 Ga0501225_0001014 3300049705 Bacteria 8815
234 Ga0501044_0006821 3300049823 Bacteria 12583
235 Ga0501044_0039783 3300049823 Bacteria 4903
236 nmdc:mga0k408_337431_c1 3300050493 Bacteria 899
237 nmdc:mga0k408_479856_c1 3300050493 Bacteria 737
238 nmdc:mga0k408_54565_c1 3300050493 Bacteria 1227
239 nmdc:mga05p37_210999_c1 3300050507 Bacteria 2347
240 nmdc:mga05p37_48940_c1 3300050507 Bacteria 5198
241 nmdc:mga06r32_110513_c1 3300050510 Bacteria 2704
242 nmdc:mga08y16_417857_c1 3300050511 Bacteria 1371
243 Ga0500578_0000100 3300053086 Bacteria 99827
244 Ga0500578_0011031 3300053086 Bacteria 5839
245 Ga0500644_0010817 3300053088 Bacteria 2477
246 Ga0500646_0020734 3300053090 Bacteria 1747
247 Ga0500583_0000009 3300053092 Bacteria 160749
248 Ga0500583_0000258 3300053092 Bacteria 18965
249 Ga0500650_0034448 3300053098 Bacteria 2314
250 Ga0500554_090434 3300053102 Bacteria 1017
251 Ga0500556_0025167 3300053104 Bacteria 1964
252 Ga0500572_003785 3300053111 Bacteria 3435
253 Ga0500594_0041917 3300053118 Bacteria 1256
254 Ga0500568_0009973 3300053139 Bacteria 4481
255 Ga0500588_0002111 3300053146 Bacteria 3966
256 Ga0500616_0042554 3300053153 Bacteria 2432
257 Ga0500622_0004860 3300053156 Bacteria 8234
258 Ga0500645_046730 3300053730 Bacteria 1270
259 Ga0587068_032997 3300059641 Bacteria 907
260 2738725991 2738541278 Bacteria 9755573
261 Ga0500616_0020639
262 rootH2_10024559
263 rootH1_10023615
264 Ga0070658_10060154
265 Ga0070676_10135890
266 Ga0070690_100022621
267 Ga0070670_100233937
268 Ga0070670_100529026
269 Ga0070666_10083446
270 Ga0070666_10087691
271 Ga0070680_100096431
272 Ga0070682_100165645
273 Ga0068868_100280333
274 Ga0070689_100123269
275 Ga0070668_100244893
276 Ga0070669_100094228
277 Ga0070669_100192596
278 Ga0070675_100037196
279 Ga0070671_100007610
280 Ga0070673_100019755
281 Ga0070673_100029002
282 Ga0070667_100025758
283 Ga0070667_100030328
284 Ga0070667_100187981
285 Ga0070701_10008695
286 Ga0070662_100176146
287 Ga0068867_100240492
288 Ga0070685_10148326
289 Ga0070699_100612521
290 Ga0070679_100043146
291 Ga0068853_100003264
292 Ga0068853_100047870
293 Ga0068853_100097851
294 Ga0070672_100048561
295 Ga0070686_100012921
296 Ga0070665_100000009
297 Ga0068855_100042936
298 Ga0068855_100303844
299 Ga0070664_100027319
300 Ga0068857_100135980
301 Ga0068856_100008185
302 Ga0068856_100037562
303 Ga0070702_100028921
304 Ga0068852_100115547
305 Ga0068852_100545394
306 Ga0068859_100000012
307 Ga0068859_100000859
308 Ga0068859_100022454
309 Ga0068859_100298408
310 Ga0068864_100027991
311 Ga0068864_100049799
312 Ga0068864_100094240
313 Ga0068851_10042344
314 Ga0068851_10056759
315 Ga0068870_10050722
316 Ga0068863_100013238
317 Ga0068863_100168498
318 Ga0068858_100004166
319 Ga0068858_100276114
320 Ga0068860_100000033
321 Ga0068860_100001094
322 Ga0068860_100003278
323 Ga0068860_100009501
324 Ga0068860_100016656
325 Ga0068860_100017849
326 Ga0068862_100003222
327 Ga0070712_100009021
328 Ga0075366_10090333
329 Ga0075366_10198232
330 Ga0097621_100041865
331 Ga0097621_100056177
332 Ga0097621_100413636
333 Ga0097621_100452523
334 Ga0068871_100013362
335 Ga0068871_100025489
336 Ga0068871_100111155
337 Ga0075431_100111926
338 Ga0075429_100094024
339 Ga0068865_100304900
340 Ga0097620_100000012
341 Ga0097620_100000859
342 Ga0097620_100022453
343 Ga0097620_100298400
344 Ga0105240_10010077
345 Ga0111539_10018274
346 Ga0111539_10084628
347 Ga0105245_10455736
348 Ga0105247_10092119
349 Ga0114129_10007165
350 Ga0114129_10251609
351 Ga0105241_10002077
352 Ga0105241_10003136
353 Ga0105241_10281188
354 Ga0105242_10296265
355 Ga0105237_10027180
356 Ga0105237_10029212
357 Ga0105249_10020127
358 Ga0105249_10127468
359 Ga0105239_10002925
360 Ga0105246_10065182
361 Ga0105246_10075505
362 Ga0157373_10002837
363 Ga0157371_10021599
364 Ga0157370_10114782
365 Ga0157369_10005338
366 Ga0157374_10667942
367 Ga0157378_10000557
368 Ga0157378_10001550
369 Ga0157378_10014367
370 Ga0157378_10025884
371 Ga0157378_10497658
372 Ga0163162_10000282
373 Ga0163162_10003354
374 Ga0163162_10008682
375 Ga0163162_10015373
376 Ga0157372_10048595
377 Ga0157372_10115882
378 Ga0157375_10052755
379 Ga0157375_10204064
380 Ga0157375_10210780
381 Ga0157375_10245387
382 Ga0157375_10601626
383 Ga0163163_10108894
384 Ga0157379_10092262
385 Ga0157379_10124531
386 Ga0157376_10061207
387 Ga0157376_10185315
388 Ga0157376_10216647
389 Ga0163161_10010665
390 Ga0209646_1001484
391 Ga0207656_10004847
392 Ga0207710_10127235
393 Ga0207680_10000515
394 Ga0207680_10068647
395 Ga0207680_10084259
396 Ga0207645_10017986
397 Ga0207645_10086368
398 Ga0207705_10028614
399 Ga0207654_10003719
400 Ga0207695_10084540
401 Ga0207671_10011769
402 Ga0207671_10159579
403 Ga0207662_10015036
404 Ga0207652_10015459
405 Ga0207681_10124972
406 Ga0207650_10109923
407 Ga0207650_10248796
408 Ga0207650_10590064
409 Ga0207659_10122765
410 Ga0207644_10049779
411 Ga0207665_10413273
412 Ga0207691_10130244
413 Ga0207691_10297379
414 Ga0207679_10077962
415 Ga0207667_10003319
416 Ga0207667_10339642
417 Ga0207651_10303465
418 Ga0207712_10054799
419 Ga0207712_10218457
420 Ga0207668_10077815
421 Ga0207658_10018296
422 Ga0207658_10033261
423 Ga0207658_10067976
424 Ga0207658_10121882
425 Ga0207639_10024604
426 Ga0207639_10068456
427 Ga0207639_10070214
428 Ga0207639_10774914
429 Ga0207708_10367694
430 Ga0207702_10006520
431 Ga0207702_10047672
432 Ga0207641_10001539
433 Ga0207648_10103440
434 Ga0207648_10349510
435 Ga0207676_10129594
436 Ga0207676_10618271
437 Ga0207675_100285064
438 Ga0207675_100301254
439 Ga0207683_10075229
440 Ga0207698_10090475
441 Ga0207698_10441536
442 Ga0268266_10000014
443 Ga0268265_10304484
444 Ga0268264_10000013
445 Ga0268264_10001722
446 Ga0268264_10002806
447 Ga0268264_10010077
448 Ga0268264_10010214
449 Ga0268264_10011744
450 Ga0307515_10000010
451 Ga0307515_10000039
452 Ga0265332_10124191
453 Ga0307513_10165546
454 Ga0307513_10194455
455 Ga0307513_10317355
456 Ga0307509_10107516
457 Ga0307509_10267622
458 Ga0307508_10382811
459 Ga0307416_100245969
460 Ga0395899_0273792
461 Ga0395905_0028527
462 Ga0439436_0000413
463 Ga0439439_0011260
464 Ga0439439_0017625
465 Ga0451841_0373863
466 Ga0439449_0037016
467 Ga0439457_003832
468 Ga0439462_0028262
469 Ga0451577_0334818
470 Ga0466969_0004123
471 Ga0466972_0000104
472 Ga0466972_0062493
473 Ga0466966_0000193
474 Ga0453684_0610719
475 Ga0466957_0001943
476 Ga0466959_0002486
477 Ga0495650_0047341
478 Ga0495632_0051352
479 Ga0495648_0001328
480 Ga0495609_0195499
481 Ga0495668_0002342
482 Ga0495611_0024445
483 Ga0495625_0147530
484 Ga0495687_000106
485 Ga0501300_000732
486 Ga0501312_044965
487 Ga0501033_0031966
488 Ga0501034_0005007
489 Ga0501047_0067097
490 Ga0501047_0601434
491 Ga0501048_0363335
492 Ga0501235_027344
493 Ga0501225_0001014
494 Ga0501044_0006821
495 Ga0501044_0039783
496 nmdc:mga0k408_337431_c1
497 nmdc:mga0k408_479856_c1
498 nmdc:mga0k408_54565_c1
499 nmdc:mga05p37_210999_c1
500 nmdc:mga05p37_48940_c1
501 nmdc:mga06r32_110513_c1
502 nmdc:mga08y16_417857_c1
503 Ga0500578_0000100
504 Ga0500578_0011031
505 Ga0500644_0010817
506 Ga0500646_0020734
507 Ga0500583_0000009
508 Ga0500583_0000258
509 Ga0500650_0034448
510 Ga0500554_090434
511 Ga0500556_0025167
512 Ga0500572_003785
513 Ga0500594_0041917
514 Ga0500568_0009973
515 Ga0500588_0002111
516 Ga0500616_0042554
517 Ga0500622_0004860
518 Ga0500645_046730
519 Ga0587068_032997
520 2738725991

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01507

PAPS_reduct

Phosphoadenosine phosphosulfate reductase family

67

242

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
7lhs-assembly2.cif.gz_B crystal structure of adenosine-5'-phosphosulfate reductase from mycobacterium tuberculosis in a complex with substrate aps 0.8576 6 214
6vpu-assembly3.cif.gz_C 1.90 angstrom resolution crystal structure phosphoadenosine phosphosulfate reductase (cysh) from vibrio vulnificus 0.8535 5 203
7rge-assembly1.cif.gz_A crystal structure of phosphoadenylyl-sulfate (paps) reductase from candida auris, phosphate complex 0.851 11 205
7lhu-assembly2.cif.gz_B crystal structure of adenosine-5'-phosphosulfate reductase from mycobacterium tuberculosis in a complex with product amp 0.8501 6 214
7lhs-assembly1.cif.gz_A crystal structure of adenosine-5'-phosphosulfate reductase from mycobacterium tuberculosis in a complex with substrate aps 0.8488 6 212
ID Description Score Start End Superfamily
af_P17854_2_216_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8464 5 202 3.40.50.620
2goyE00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8418 12 224 3.40.50.620
2goyE00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8068 12 224 3.40.50.620
af_P9WIK3_10_254_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8049 6 231 3.40.50.620
2oq2D00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.785 16 229 3.40.50.620
ID Description Score Start End GO Terms
AF-A0A4Q3SK84-F1-model_v4 Phosphoadenylyl-sulfate reductase 0.9831 8 142 GO:0003824
GO:0051536
AF-A0A4Q3VIW1-F1-model_v4 Phosphoadenylyl-sulfate reductase (EC 1.8.4.8) 0.9788 12 198 GO:0004604
GO:0019379
AF-A0A4Q3VPX6-F1-model_v4 Phosphoadenylyl-sulfate reductase (EC 1.8.4.8) 0.9738 7 194 GO:0004604
GO:0019379
GO:0051536
AF-A0A662AVE9-F1-model_v4 Phosphoadenylyl-sulfate reductase (EC 1.8.4.8) 0.973 12 186 GO:0004604
GO:0019379
GO:0051536
AF-A0A4Q3ERI3-F1-model_v4 Phosphoadenylyl-sulfate reductase (EC 1.8.4.8) 0.9685 10 194 GO:0004604
GO:0019379
GO:0051536

Map