F369979

General Info

Members Datasets Scaffolds Average Seq Length
260 193 199 498

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2954691527|2954699293
Length 543
Sequence RTRNSASLISVTRQEFSSRTAVPLSALMPPKAGAAVTTASPSDVRPDPPHSSSPDDRSLTEFGYHQELHRSLGRYASFAAGFSFISVLTTVFQFFAFGYAFGGPVFFWAWPVVLVGQFLVAACFAELAARYPLSGAIYQWSSRLATPAFGWFAGWIMVIGQIVVVAAAALALQMVLPAIWSGFQLVGTDPAPTSADGAANAALLGVILLVLTTVVNILDNRVLSLVNRVGVTAEIIGAVLIIVLLLTHSERTPSITFHTTGAAQSGLLGALLVGSFAAAYVMIGFDSAGEMSEETHAPRRTAPRTILTALGAAGVLGGLLVLGGLLAAPSLTDGHLSVDGLSYVLTSSLGDGVGKALLADVVVAIAVATLAIQTAACRMLFSMARDGQLPFAGRLARVNPRTGMPTAPALVVGILAAALLLLNFASPEAFLAIGTTCIVMLYLAYAMVTGPLLIRRVRGEFTSEGTDETGARLFSLGRWGVPVNALALLYGLLMTVNLAWPRAEVYDPAGGHWYFQWFTVLFLAATLAVGVAWRAVRGRTPTG

Samples

Sample ID Description Type Environment
1 2523231044 Gordonia rhizosphera NBRC 16068 Isolate Rhizosphere
2 2565956761 Rhodococcus qingshengii BKS 20-40 Isolate Rhizosphere
3 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
4 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
5 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
6 2643221647 Streptomyces sp. Root369 Isolate Unclassified
7 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
8 2643221714 Streptomyces sp. Root264 Isolate Unclassified
9 2643221961 Aeromicrobium sp. Root236 Isolate Unclassified
10 2643221962 Aeromicrobium sp. Root344 Isolate Unclassified
11 2728369276 Kineococcus rhizosphaerae DSM 19711 Isolate Rhizosphere
12 2738541308 Rhodococcus sp. OK551 Isolate Unclassified
13 2738543005 Rhodococcus sp. OK519 Isolate Unclassified
14 2738543011 Rhodococcus sp. OK611 Isolate Unclassified
15 2738543034 Rhodococcus sp. OK269 Isolate Unclassified
16 2744054611 Aldersonia kunmingensis DSM 45001 Isolate Rhizosphere
17 2751185725 Microbispora sp. NRRL B-24597 Isolate Unclassified
18 2751185792 Kitasatospora arboriphila NRRL B-24581 Isolate Unclassified
19 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
20 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
21 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
22 2799112218 Motilibacter rhizosphaerae DSM 45622 Isolate Rhizosphere
23 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
24 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
25 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
26 2862574272 Streptomyces sp. AcE210 Isolate Nodule
27 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
28 2867428634 Streptomyces sp. RP5T Isolate Unclassified
29 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
30 2889300758 Rhodococcus sp. PvR099 Isolate Rhizosphere
31 2891395885 Microbispora catharanthi CR1-09 Isolate Unclassified
32 2891554331 Microbispora sp. CL1-1 Isolate Unclassified
33 2895427314 Nonomuraea sp. PA05 Isolate Unclassified
34 2904535858 Rhodococcus erythropolis 2017 Isolate Unclassified
35 2904765812 Rhodococcus fascians 1590 Isolate Rhizosphere
36 2904770941 Rhodococcus fascians 1339 Isolate Rhizosphere
37 2908811453 Rhodococcus sp. 1R11 Isolate Unclassified
38 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
39 2919420072 Rhodococcus fascians 3241 Isolate Rhizosphere
40 2919432681 Rhodococcus sp. 3258 Isolate Rhizosphere
41 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
42 2922554459 Rhodococcus sp. 66b Isolate Unclassified
43 2928142448 Prescottella equi DPS 2018 Isolate Unclassified
44 2932398195 Dietzia sp. 2505 Isolate Rhizosphere
45 2939743619 Rhodococcus sp. PvR044 Isolate Rhizosphere
46 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
47 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
48 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
49 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
50 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
51 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
52 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
53 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
54 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
55 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
56 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
57 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
58 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
59 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
60 3006321560 Actinacidiphila epipremni PRB2-1 Isolate Unclassified
61 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
62 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
63 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
64 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
65 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
66 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
67 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
68 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
69 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
70 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
71 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
72 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
73 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
74 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
75 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
76 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
77 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
78 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
79 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
84 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
85 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
86 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
87 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
88 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
89 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
90 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
91 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
92 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
93 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
94 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
95 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
96 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
97 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
98 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
99 3300042135 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_070716_127 Metagenome Rhizosphere
100 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
101 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
102 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
103 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
104 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
105 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
106 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
107 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
108 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
109 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
110 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
111 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
112 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
113 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
114 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
115 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
116 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
117 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
118 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
119 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
120 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
121 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
122 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
123 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
124 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
125 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
126 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
127 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
128 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
129 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
130 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
131 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
132 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
133 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
134 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
135 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
136 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
137 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
138 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
139 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
140 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
141 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
142 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
143 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
144 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
145 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
146 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
147 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
148 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
149 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
150 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
151 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
152 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
153 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
154 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
155 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
156 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
157 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
158 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
159 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
160 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
161 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
162 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
163 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
164 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
165 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
166 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
167 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
168 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
169 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
170 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
171 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
172 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
173 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
174 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
175 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
176 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
177 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
178 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
179 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
180 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
181 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
182 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
183 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
184 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
185 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
186 3300053099 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 endosphere Metagenome Endosphere
187 3300053100 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 endosphere Metagenome Endosphere
188 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
189 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
190 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
191 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
192 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
193 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 76.15
Metatranscriptomes 0.38
Isolates 23.46

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5
Nodule 0.77
Rhizoplane 0.38
Rhizosphere 75.38
Stem 0
Stem Tuber 0
Unclassified 18.46

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24739J22299_10030298 3300001989 Bacteria 1876
2 rootH1_10006355 3300003316 Bacteria 4813
3 rootH1_10007279 3300003316 Bacteria 13019
4 rootH2_10004069 3300003320 Bacteria 8838
5 rootH1_10123235 3300003323 Bacteria 5202
6 Ga0070713_100023555 3300005436 Bacteria 4780
7 Ga0068853_100020742 3300005539 Bacteria 5466
8 Ga0068853_100026706 3300005539 Bacteria 4850
9 Ga0075368_10000771 3300006042 Bacteria 9833
10 Ga0075363_100012186 3300006048 Bacteria 4138
11 Ga0070712_100113838 3300006175 Bacteria 2024
12 Ga0075367_10001077 3300006178 Bacteria 11250
13 Ga0075370_10069735 3300006353 Bacteria 2010
14 Ga0105243_10009325 3300009148 Bacteria 7485
15 Ga0105241_10000714 3300009174 Bacteria 25119
16 Ga0105238_10053999 3300009551 Bacteria 4037
17 Ga0182008_10003412 3300014497 Bacteria 9600
18 Ga0182007_10002475 3300015262 Bacteria 9155
19 Ga0183367_1010 3300015688 Bacteria 416164
20 Ga0206353_10880740 3300020082 Bacteria 2770
21 Ga0207693_10123546 3300025915 Bacteria 2033
22 Ga0207694_10065482 3300025924 Bacteria 2833
23 Ga0207700_10036992 3300025928 Bacteria 3531
24 Ga0207709_10013846 3300025935 Bacteria 4453
25 Ga0307517_10003333 3300028786 Bacteria 25000
26 Ga0307517_10004494 3300028786 Bacteria 21409
27 Ga0307515_10001737 3300028794 Bacteria 48507
28 Ga0307511_10000706 3300030521 Bacteria 35610
29 Ga0307512_10000948 3300030522 Bacteria 42647
30 Ga0265327_10000001 3300031251 Bacteria 894475
31 Ga0307513_10123738 3300031456 Bacteria 2547
32 Ga0307509_10010908 3300031507 Bacteria 11077
33 Ga0307508_10007960 3300031616 Bacteria 9831
34 Ga0307508_10022659 3300031616 Bacteria 5708
35 Ga0307514_10006063 3300031649 Bacteria 10622
36 Ga0307516_10041434 3300031730 Bacteria 4577
37 Ga0307507_10000005 3300033179 Bacteria 281494
38 Ga0307507_10023543 3300033179 Bacteria 6754
39 Ga0307507_10033031 3300033179 Bacteria 5383
40 Ga0395898_0005400 3300037466 Bacteria 13812
41 Ga0451853_1511634 3300041512 Bacteria 7064
42 Ga0439455_0011201 3300042012 Bacteria 1987
43 Ga0450894_000156 3300042131 Bacteria 11986
44 Ga0450898_000025 3300042134 Bacteria 11730
45 Ga0450899_000377 3300042135 Bacteria 4957
46 Ga0450903_000774 3300042138 Bacteria 6233
47 Ga0450906_000326 3300042145 Bacteria 9695
48 Ga0439458_0000055 3300042157 Bacteria 19429
49 Ga0466969_0010852 3300044656 Bacteria 4827
50 Ga0466972_0016688 3300044658 Bacteria 3671
51 Ga0466965_0010848 3300044683 Bacteria 4262
52 Ga0466966_0016969 3300044684 Bacteria 4811
53 Ga0466966_0075404 3300044684 Bacteria 2107
54 Ga0466961_0005173 3300044693 Bacteria 8208
55 Ga0466963_0002447 3300044694 Bacteria 10384
56 Ga0466971_0055487 3300044719 Bacteria 1786
57 Ga0466968_0009843 3300044735 Bacteria 3690
58 Ga0466968_0036181 3300044735 Bacteria 2068
59 Ga0466970_0000651 3300044765 Bacteria 17075
60 Ga0466970_0005975 3300044765 Bacteria 6065
61 Ga0466957_0000878 3300044842 Bacteria 15410
62 Ga0466960_0005935 3300044901 Bacteria 4870
63 Ga0466959_0014073 3300045049 Bacteria 5808
64 Ga0466958_0046008 3300045836 Bacteria 2633
65 Ga0466967_0016744 3300045976 Bacteria 5792
66 Ga0466967_0034524 3300045976 Bacteria 4294
67 Ga0466967_0107661 3300045976 Bacteria 2557
68 Ga0495592_0007897 3300046454 Bacteria 7979
69 Ga0495592_0083373 3300046454 Bacteria 2308
70 Ga0495592_0088373 3300046454 Bacteria 2227
71 Ga0495603_0000267 3300046455 Bacteria 27512
72 Ga0495603_0000738 3300046455 Bacteria 18654
73 Ga0495603_0005665 3300046455 Bacteria 7464
74 Ga0495603_0010717 3300046455 Bacteria 5559
75 Ga0495603_0027430 3300046455 Bacteria 3437
76 Ga0495629_0000502 3300046459 Bacteria 32803
77 Ga0495629_0000636 3300046459 Bacteria 28482
78 Ga0495629_0006245 3300046459 Bacteria 8843
79 Ga0495629_0025277 3300046459 Bacteria 4223
80 Ga0495638_0031106 3300046460 Bacteria 3432
81 Ga0495651_0000338 3300046462 Bacteria 36222
82 Ga0495653_0036333 3300046463 Bacteria 3881
83 Ga0495580_0038794 3300046472 Bacteria 3410
84 Ga0495605_0011179 3300046474 Bacteria 5015
85 Ga0495662_0000342 3300046476 Bacteria 20348
86 Ga0495662_0002500 3300046476 Bacteria 9272
87 Ga0495662_0006092 3300046476 Bacteria 6027
88 Ga0495662_0019959 3300046476 Bacteria 3242
89 Ga0495662_0029827 3300046476 Bacteria 2632
90 Ga0495664_0000172 3300046477 Bacteria 31804
91 Ga0495664_0058409 3300046477 Bacteria 2295
92 Ga0495585_0023965 3300046492 Bacteria 3501
93 Ga0495594_0001403 3300046499 Bacteria 12503
94 Ga0495594_0056459 3300046499 Bacteria 2166
95 Ga0495583_0004253 3300046506 Bacteria 10385
96 Ga0495606_0018660 3300046507 Bacteria 5192
97 Ga0495608_0001872 3300046511 Bacteria 15051
98 Ga0495610_0044803 3300046512 Bacteria 2193
99 Ga0495616_0017035 3300046513 Bacteria 4011
100 Ga0495620_0001043 3300046515 Bacteria 17012
101 Ga0495628_0004485 3300046516 Bacteria 12368
102 Ga0495643_0001233 3300046522 Bacteria 24635
103 Ga0495643_0010474 3300046522 Bacteria 5705
104 Ga0495652_0080548 3300046529 Bacteria 2689
105 Ga0495665_0003389 3300046531 Bacteria 8651
106 Ga0495640_0005756 3300046533 Bacteria 9847
107 Ga0495587_0001308 3300046536 Bacteria 16539
108 Ga0495609_0020817 3300046538 Bacteria 3027
109 Ga0495597_0039393 3300046542 Bacteria 2116
110 Ga0495645_0002940 3300046543 Bacteria 11546
111 Ga0495645_0027789 3300046543 Bacteria 4110
112 Ga0495656_0051513 3300046615 Bacteria 1762
113 Ga0495668_0011619 3300046616 Bacteria 5265
114 Ga0495634_0013990 3300046642 Bacteria 5794
115 Ga0495634_0021539 3300046642 Bacteria 4553
116 Ga0495634_0050059 3300046642 Bacteria 2807
117 Ga0495611_0012695 3300046648 Bacteria 3582
118 Ga0495625_0008705 3300046660 Bacteria 8606
119 Ga0495625_0019314 3300046660 Bacteria 5291
120 Ga0495625_0044317 3300046660 Bacteria 3221
121 Ga0495635_0000490 3300046663 Bacteria 25000
122 Ga0495588_0003750 3300046674 Bacteria 6645
123 Ga0495588_0047961 3300046674 Bacteria 2194
124 Ga0495657_0003853 3300046675 Bacteria 12099
125 Ga0495657_0004147 3300046675 Bacteria 11603
126 Ga0495657_0005718 3300046675 Bacteria 9794
127 Ga0495646_0004558 3300046680 Bacteria 8731
128 Ga0495613_0001230 3300046689 Bacteria 19576
129 Ga0495613_0005946 3300046689 Bacteria 9129
130 Ga0495613_0008627 3300046689 Bacteria 7561
131 Ga0495613_0022044 3300046689 Bacteria 4748
132 Ga0495613_0057128 3300046689 Bacteria 2865
133 Ga0495613_0130770 3300046689 Bacteria 1797
134 Ga0495624_0061520 3300046690 Bacteria 2352
135 Ga0495670_0040354 3300046691 Bacteria 2328
136 Ga0495649_0048030 3300046694 Bacteria 2320
137 Ga0495589_0000529 3300046794 Bacteria 26758
138 Ga0495589_0000937 3300046794 Bacteria 17884
139 Ga0495589_0003267 3300046794 Bacteria 8835
140 Ga0495600_0017766 3300046809 Bacteria 4526
141 Ga0495660_0026387 3300046810 Bacteria 3294
142 Ga0495604_0001154 3300047317 Bacteria 21849
143 Ga0495604_0001356 3300047317 Bacteria 20036
144 Ga0495604_0158318 3300047317 Bacteria 1602
145 Ga0495636_0007932 3300047318 Bacteria 4180
146 Ga0495636_0015241 3300047318 Bacteria 3064
147 Ga0495636_0018227 3300047318 Bacteria 2816
148 Ga0495674_0133882 3300047319 Bacteria 2087
149 Ga0495676_0000304 3300047321 Bacteria 39774
150 Ga0495676_0003385 3300047321 Bacteria 14405
151 Ga0495676_0009891 3300047321 Bacteria 8667
152 Ga0495676_0011241 3300047321 Bacteria 8092
153 Ga0495676_0015261 3300047321 Bacteria 6845
154 Ga0495676_0023988 3300047321 Bacteria 5286
155 Ga0495676_0132783 3300047321 Bacteria 1794
156 Ga0495687_003357 3300047443 Bacteria 11686
157 Ga0495687_004062 3300047443 Bacteria 10138
158 Ga0495687_026752 3300047443 Bacteria 2710
159 Ga0495687_033401 3300047443 Bacteria 2334
160 Ga0495675_0077340 3300047444 Bacteria 2096
161 Ga0495675_0083288 3300047444 Bacteria 2013
162 Ga0495685_001470 3300047447 Bacteria 7226
163 Ga0495685_001520 3300047447 Bacteria 7110
164 Ga0495685_004332 3300047447 Bacteria 4577
165 Ga0495685_004385 3300047447 Bacteria 4556
166 Ga0495685_008370 3300047447 Bacteria 3433
167 Ga0495685_008906 3300047447 Bacteria 3345
168 Ga0495681_0012974 3300047470 Bacteria 4866
169 Ga0495681_0034815 3300047470 Bacteria 2505
170 Ga0495681_0039790 3300047470 Bacteria 2293
171 Ga0495684_0045325 3300047471 Bacteria 3365
172 Ga0495593_0002981 3300047673 Bacteria 10191
173 Ga0495593_0013295 3300047673 Bacteria 4698
174 Ga0495614_0005882 3300048089 Bacteria 5526
175 Ga0495614_0005898 3300048089 Bacteria 5520
176 Ga0495626_0026648 3300048091 Bacteria 2814
177 Ga0496108_0157112 3300048911 Bacteria 1964
178 Ga0496125_0047800 3300048928 Bacteria 3573
179 Ga0501033_0010370 3300049570 Bacteria 7150
180 Ga0501034_0024407 3300049571 Bacteria 6151
181 Ga0501037_0000475 3300049573 Bacteria 32426
182 Ga0501038_0000993 3300049574 Bacteria 25525
183 Ga0501039_0040922 3300049575 Bacteria 3577
184 Ga0501043_0001171 3300049579 Bacteria 23059
185 Ga0501047_0217740 3300049581 Bacteria 1766
186 Ga0501044_0029528 3300049823 Bacteria 5781
187 Ga0501044_0125812 3300049823 Bacteria 2561
188 nmdc:mga00v17_22244_c1 3300050491 Bacteria 3656
189 nmdc:mga06z11_1948_c1 3300050494 Bacteria 7788
190 Ga0495601_0024200 3300053077 Bacteria 3739
191 Ga0500640_002068 3300053095 Bacteria 6471
192 Ga0500654_035781 3300053099 Bacteria 2907
193 Ga0500660_030444 3300053100 Bacteria 2818
194 Ga0500573_0032009 3300053140 Bacteria 3035
195 Ga0500600_0118993 3300053149 Bacteria 1365
196 Ga0500633_0007761 3300053160 Bacteria 2724
197 Ga0500634_0010377 3300053161 Bacteria 4758
198 Ga0466962_0003306 3300061719 Bacteria 7664
199 Ga0466962_0046767 3300061719 Bacteria 2068

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300050491 nmdc:mga00v17_22244_c1 nmdc:mga00v17_22244_c1_1486_3027 405
2 3300053149 Ga0500600_0118993 Ga0500600_0118993_15_1352 407
3 3300006175 Ga0070712_100113838 Ga0070712_1001138381 412
4 3300025915 Ga0207693_10123546 Ga0207693_101235461 412
5 3300005436 Ga0070713_100023555 Ga0070713_1000235553 420
6 3300025928 Ga0207700_10036992 Ga0207700_100369924 420
7 3300044658 Ga0466972_0016688 Ga0466972_0016688_266_1786 421
8 3300044901 Ga0466960_0005935 Ga0466960_0005935_3339_4859 421
9 3300049571 Ga0501034_0024407 Ga0501034_0024407_4627_6135 424
10 3300049573 Ga0501037_0000475 Ga0501037_0000475_19286_20794 424
11 3300049574 Ga0501038_0000993 Ga0501038_0000993_18697_20205 424
12 3300049575 Ga0501039_0040922 Ga0501039_0040922_1235_2743 424
13 3300049579 Ga0501043_0001171 Ga0501043_0001171_20953_22461 424
14 3300005539 Ga0068853_100026706 Ga0068853_1000267061 428
15 3300044765 Ga0466970_0005975 Ga0466970_0005975_166_1791 430
16 3300009148 Ga0105243_10009325 Ga0105243_100093258 434
17 3300025935 Ga0207709_10013846 Ga0207709_100138462 434
18 3300049823 Ga0501044_0029528 Ga0501044_0029528_2554_4062 434
19 3300046616 Ga0495668_0011619 Ga0495668_0011619_2812_4440 436
20 3300048928 Ga0496125_0047800 Ga0496125_0047800_275_1903 436
21 3300044683 Ga0466965_0010848 Ga0466965_0010848_162_1697 438
22 3300044684 Ga0466966_0016969 Ga0466966_0016969_825_2360 438
23 3300044694 Ga0466963_0002447 Ga0466963_0002447_164_1699 438
24 3300044735 Ga0466968_0036181 Ga0466968_0036181_460_1995 438
25 3300044765 Ga0466970_0000651 Ga0466970_0000651_14716_16251 438
26 3300044842 Ga0466957_0000878 Ga0466957_0000878_169_1704 438
27 3300045976 Ga0466967_0034524 Ga0466967_0034524_195_1730 438
28 3300061719 Ga0466962_0003306 Ga0466962_0003306_1209_2744 438
29 3300046648 Ga0495611_0012695 Ga0495611_0012695_1877_3448 439
30 3300046794 Ga0495589_0000529 Ga0495589_0000529_4165_5736 439
31 3300047447 Ga0495685_004385 Ga0495685_004385_21_1592 439
32 3300031251 Ga0265327_10000001 Ga0265327_10000001462 441
33 3300046455 Ga0495603_0005665 Ga0495603_0005665_43_1587 441
34 3300047321 Ga0495676_0023988 Ga0495676_0023988_1585_3129 441
35 3300033179 Ga0307507_10000005 Ga0307507_10000005243 445
36 3300046454 Ga0495592_0088373 Ga0495592_0088373_203_1771 448
37 3300046463 Ga0495653_0036333 Ga0495653_0036333_576_2144 448
38 3300046472 Ga0495580_0038794 Ga0495580_0038794_1003_2571 448
39 3300046476 Ga0495662_0000342 Ga0495662_0000342_11923_13491 448
40 3300046511 Ga0495608_0001872 Ga0495608_0001872_3802_5370 448
41 3300046516 Ga0495628_0004485 Ga0495628_0004485_6715_8283 448
42 3300046531 Ga0495665_0003389 Ga0495665_0003389_876_2444 448
43 3300046533 Ga0495640_0005756 Ga0495640_0005756_6848_8416 448
44 3300046543 Ga0495645_0027789 Ga0495645_0027789_1889_3457 448
45 3300046642 Ga0495634_0021539 Ga0495634_0021539_457_2025 448
46 3300046675 Ga0495657_0005718 Ga0495657_0005718_1512_3080 448
47 3300046809 Ga0495600_0017766 Ga0495600_0017766_2123_3691 448
48 3300047317 Ga0495604_0001154 Ga0495604_0001154_6308_7876 448
49 3300047444 Ga0495675_0077340 Ga0495675_0077340_331_1899 448
50 3300047471 Ga0495684_0045325 Ga0495684_0045325_807_2375 448
51 3300053077 Ga0495601_0024200 Ga0495601_0024200_1941_3509 448
52 3300009174 Ga0105241_10000714 Ga0105241_100007146 449
53 3300020082 Ga0206353_10880740 Ga0206353_108807402 452
54 3300046476 Ga0495662_0019959 Ga0495662_0019959_992_2542 452
55 3300049581 Ga0501047_0217740 Ga0501047_0217740_177_1721 455
56 3300049823 Ga0501044_0125812 Ga0501044_0125812_118_1662 455
57 3300042012 Ga0439455_0011201 Ga0439455_0011201_429_1973 457
58 3300042138 Ga0450903_000774 Ga0450903_000774_4511_6055 457
59 3300042157 Ga0439458_0000055 Ga0439458_0000055_4777_6321 457
60 3300046455 Ga0495603_0000738 Ga0495603_0000738_15432_16961 457
61 3300046459 Ga0495629_0000502 Ga0495629_0000502_15652_17181 457
62 3300046689 Ga0495613_0001230 Ga0495613_0001230_2136_3665 457
63 3300047321 Ga0495676_0000304 Ga0495676_0000304_33209_34738 457
64 3300048089 Ga0495614_0005898 Ga0495614_0005898_2510_4039 457
65 3300005539 Ga0068853_100020742 Ga0068853_1000207423 459
66 3300009551 Ga0105238_10053999 Ga0105238_100539992 459
67 3300025924 Ga0207694_10065482 Ga0207694_100654822 459
68 3300046694 Ga0495649_0048030 Ga0495649_0048030_68_1597 459
69 3300045976 Ga0466967_0016744 Ga0466967_0016744_1661_3169 460
70 iso_pu_bacteria 2867428634 2867437873 460
71 3300046455 Ga0495603_0027430 Ga0495603_0027430_1087_2616 461
72 3300046459 Ga0495629_0000636 Ga0495629_0000636_4589_6118 461
73 3300046499 Ga0495594_0001403 Ga0495594_0001403_5684_7213 461
74 3300046674 Ga0495588_0047961 Ga0495588_0047961_241_1770 461
75 3300047321 Ga0495676_0015261 Ga0495676_0015261_4436_5965 461
76 3300049570 Ga0501033_0010370 Ga0501033_0010370_5048_6652 461
77 iso_pu_bacteria 2738543011 2739235530 461
78 iso_pu_bacteria 2744054611 2744957255 461
79 iso_pu_bacteria 2889300758 2889301471 461
80 iso_pu_bacteria 2939743619 2939747802 461
81 3300003316 rootH1_10007279 rootH1_100072792 462
82 3300003320 rootH2_10004069 rootH2_100040694 462
83 3300044656 Ga0466969_0010852 Ga0466969_0010852_1912_3468 462
84 3300044693 Ga0466961_0005173 Ga0466961_0005173_4041_5597 462
85 3300044735 Ga0466968_0009843 Ga0466968_0009843_108_1664 462
86 3300046794 Ga0495589_0003267 Ga0495589_0003267_3369_4919 462
87 3300061719 Ga0466962_0046767 Ga0466962_0046767_27_1583 462
88 3300046506 Ga0495583_0004253 Ga0495583_0004253_4862_6412 463
89 3300046515 Ga0495620_0001043 Ga0495620_0001043_7545_9095 463
90 3300046522 Ga0495643_0001233 Ga0495643_0001233_21076_22626 463
91 3300046542 Ga0495597_0039393 Ga0495597_0039393_148_1698 463
92 3300047443 Ga0495687_033401 Ga0495687_033401_348_1898 463
93 3300047447 Ga0495685_008906 Ga0495685_008906_1262_2812 463
94 iso_pu_bacteria 2738541308 2738892527 463
95 iso_pu_bacteria 2738543005 2739205253 463
96 iso_pu_bacteria 2928142448 2928144655 463
97 3300044684 Ga0466966_0075404 Ga0466966_0075404_455_2047 464
98 3300045049 Ga0466959_0014073 Ga0466959_0014073_2678_4270 464
99 3300045836 Ga0466958_0046008 Ga0466958_0046008_704_2296 464
100 iso_pu_bacteria 2582581314 2585315602 465
101 3300033179 Ga0307507_10023543 Ga0307507_100235433 466
102 3300046454 Ga0495592_0007897 Ga0495592_0007897_4556_6067 466
103 3300046462 Ga0495651_0000338 Ga0495651_0000338_14086_15597 466
104 3300046476 Ga0495662_0002500 Ga0495662_0002500_7259_8770 466
105 3300046477 Ga0495664_0000172 Ga0495664_0000172_8704_10215 466
106 3300046536 Ga0495587_0001308 Ga0495587_0001308_12277_13788 466
107 3300046543 Ga0495645_0002940 Ga0495645_0002940_4127_5638 466
108 3300046642 Ga0495634_0013990 Ga0495634_0013990_586_2097 466
109 3300046663 Ga0495635_0000490 Ga0495635_0000490_23326_24837 466
110 3300046675 Ga0495657_0003853 Ga0495657_0003853_2298_3809 466
111 3300046680 Ga0495646_0004558 Ga0495646_0004558_585_2096 466
112 3300046689 Ga0495613_0005946 Ga0495613_0005946_7267_8778 466
113 3300047317 Ga0495604_0001356 Ga0495604_0001356_16082_17593 466
114 3300047321 Ga0495676_0009891 Ga0495676_0009891_6651_8162 466
115 3300047447 Ga0495685_004332 Ga0495685_004332_2857_4404 466
116 3300047673 Ga0495593_0002981 Ga0495593_0002981_2572_4083 466
117 3300048089 Ga0495614_0005882 Ga0495614_0005882_3043_4554 466
118 3300053095 Ga0500640_002068 Ga0500640_002068_3578_5089 466
119 iso_pu_bacteria 2799112218 2799182901 466
120 iso_pu_bacteria 3006321560 3006323521 466
121 3300037466 Ga0395898_0005400 Ga0395898_0005400_11360_13000 467
122 iso_pu_bacteria 2565956761 2566992420 467
123 iso_pu_bacteria 2738543034 2739367227 467
124 iso_pu_bacteria 2904535858 2904539328 467
125 iso_pu_bacteria 2904765812 2904768780 467
126 iso_pu_bacteria 2904770941 2904771950 467
127 iso_pu_bacteria 2908811453 2908812760 467
128 iso_pu_bacteria 2919420072 2919422141 467
129 iso_pu_bacteria 2919432681 2919434301 467
130 iso_pu_bacteria 2922554459 2922555592 467
131 3300003316 rootH1_10006355 rootH1_100063553 468
132 3300003323 rootH1_10123235 rootH1_101232355 468
133 iso_pu_bacteria 2895427314 2895439417 469
134 iso_pu_bacteria 2932398195 2932399821 469
135 3300047318 Ga0495636_0018227 Ga0495636_0018227_230_1780 470
136 3300047443 Ga0495687_004062 Ga0495687_004062_7752_9395 470
137 iso_pu_bacteria 2643221961 2645719460 470
138 iso_pu_bacteria 2643221962 2645726375 470
139 3300048911 Ga0496108_0157112 Ga0496108_0157112_269_1819 471
140 iso_pu_bacteria 2523231044 2523382612 471
141 iso_pu_bacteria 2990059506 2990061362 471
142 3300028786 Ga0307517_10003333 Ga0307517_100033334 472
143 3300031616 Ga0307508_10022659 Ga0307508_100226592 472
144 3300031730 Ga0307516_10041434 Ga0307516_100414342 472
145 3300045976 Ga0466967_0107661 Ga0466967_0107661_793_2310 472
146 3300046455 Ga0495603_0000267 Ga0495603_0000267_18215_19798 472
147 3300046460 Ga0495638_0031106 Ga0495638_0031106_1112_2674 472
148 3300046492 Ga0495585_0023965 Ga0495585_0023965_984_2546 472
149 3300046522 Ga0495643_0010474 Ga0495643_0010474_1219_2781 472
150 3300046691 Ga0495670_0040354 Ga0495670_0040354_326_1909 472
151 3300046794 Ga0495589_0000937 Ga0495589_0000937_14640_16223 472
152 3300046810 Ga0495660_0026387 Ga0495660_0026387_1636_3198 472
153 3300047318 Ga0495636_0015241 Ga0495636_0015241_113_1696 472
154 3300047321 Ga0495676_0011241 Ga0495676_0011241_4897_6480 472
155 3300047443 Ga0495687_026752 Ga0495687_026752_365_1927 472
156 3300047447 Ga0495685_001470 Ga0495685_001470_2946_4508 472
157 3300047447 Ga0495685_001520 Ga0495685_001520_4424_5974 472
158 3300047447 Ga0495685_008370 Ga0495685_008370_1794_3377 472
159 3300047470 Ga0495681_0012974 Ga0495681_0012974_847_2409 472
160 3300053099 Ga0500654_035781 Ga0500654_035781_365_1927 472
161 3300053100 Ga0500660_030444 Ga0500660_030444_476_2038 472
162 3300053140 Ga0500573_0032009 Ga0500573_0032009_1302_2864 472
163 3300053160 Ga0500633_0007761 Ga0500633_0007761_79_1641 472
164 3300053161 Ga0500634_0010377 Ga0500634_0010377_79_1641 472
165 iso_pu_bacteria 2808606375 2808918533 472
166 iso_pu_bacteria 2863404153 2863406841 472
167 iso_pu_bacteria 2891395885 2891396633 472
168 iso_pu_bacteria 2891554331 2891559813 472
169 3300031456 Ga0307513_10123738 Ga0307513_101237382 473
170 3300046459 Ga0495629_0006245 Ga0495629_0006245_88_1638 473
171 3300047317 Ga0495604_0158318 Ga0495604_0158318_31_1587 473
172 3300047319 Ga0495674_0133882 Ga0495674_0133882_328_1881 473
173 iso_pu_bacteria 2784746768 2785367294 473
174 iso_pu_bacteria 2877676314 2877683261 473
175 iso_pu_bacteria 8008558824 8008561451 473
176 iso_pu_bacteria 2751185725 2753039489 474
177 iso_pu_bacteria 2751185792 2753327888 474
178 iso_pu_bacteria 2862574272 2862581752 474
179 iso_pu_bacteria 2954711539 2954718240 474
180 iso_pu_bacteria 2954721474 2954728208 474
181 iso_pu_bacteria 2954731030 2954733599 474
182 iso_pu_bacteria 2954749733 2954752483 474
183 3300006048 Ga0075363_100012186 Ga0075363_1000121862 475
184 3300006353 Ga0075370_10069735 Ga0075370_100697352 475
185 3300031616 Ga0307508_10007960 Ga0307508_100079601 475
186 iso_pu_bacteria 2728369276 2729908791 475
187 3300015688 Ga0183367_1010 Ga0183367_1010237 476
188 3300042131 Ga0450894_000156 Ga0450894_000156_6119_7636 476
189 3300042134 Ga0450898_000025 Ga0450898_000025_9656_11173 476
190 3300042135 Ga0450899_000377 Ga0450899_000377_1106_2623 476
191 3300042145 Ga0450906_000326 Ga0450906_000326_1256_2773 476
192 iso_pu_bacteria 2862281513 2862289520 476
193 iso_pu_bacteria 2918501144 2918508355 476
194 iso_pu_bacteria 2616644814 2616695778 477
195 iso_pu_bacteria 2784746763 2785345587 477
196 3300031649 Ga0307514_10006063 Ga0307514_100060637 478
197 iso_pu_bacteria 2643221647 2644268159 478
198 iso_pu_bacteria 2954380949 2954388503 478
199 iso_pu_bacteria 2954691527 2954699293 478
200 iso_pu_bacteria 2954701450 2954702926 478
201 iso_pu_bacteria 2946072368 2946074053 479
202 3300028786 Ga0307517_10004494 Ga0307517_100044948 480
203 3300028794 Ga0307515_10001737 Ga0307515_1000173721 480
204 3300033179 Ga0307507_10033031 Ga0307507_100330313 480
205 3300046455 Ga0495603_0010717 Ga0495603_0010717_2388_3938 480
206 3300046459 Ga0495629_0025277 Ga0495629_0025277_719_2296 480
207 3300046474 Ga0495605_0011179 Ga0495605_0011179_1114_2664 480
208 3300046499 Ga0495594_0056459 Ga0495594_0056459_15_1565 480
209 3300046512 Ga0495610_0044803 Ga0495610_0044803_211_1761 480
210 3300046513 Ga0495616_0017035 Ga0495616_0017035_1220_2770 480
211 3300046538 Ga0495609_0020817 Ga0495609_0020817_604_2154 480
212 3300046642 Ga0495634_0050059 Ga0495634_0050059_1070_2620 480
213 3300046660 Ga0495625_0008705 Ga0495625_0008705_4007_5584 480
214 3300046660 Ga0495625_0044317 Ga0495625_0044317_163_1713 480
215 3300046689 Ga0495613_0008627 Ga0495613_0008627_1279_2829 480
216 3300046689 Ga0495613_0130770 Ga0495613_0130770_88_1638 480
217 3300046690 Ga0495624_0061520 Ga0495624_0061520_172_1722 480
218 3300047321 Ga0495676_0003385 Ga0495676_0003385_6910_8460 480
219 3300047321 Ga0495676_0132783 Ga0495676_0132783_203_1753 480
220 3300047470 Ga0495681_0034815 Ga0495681_0034815_335_1912 480
221 3300047470 Ga0495681_0039790 Ga0495681_0039790_361_1911 480
222 3300047673 Ga0495593_0013295 Ga0495593_0013295_24_1574 480
223 3300048091 Ga0495626_0026648 Ga0495626_0026648_233_1783 480
224 iso_pu_bacteria 2643221678 2644443827 480
225 iso_pu_bacteria 2808606359 2808847790 480
226 3300044719 Ga0466971_0055487 Ga0466971_0055487_184_1740 481
227 3300046454 Ga0495592_0083373 Ga0495592_0083373_561_2111 481
228 3300046476 Ga0495662_0006092 Ga0495662_0006092_42_1592 481
229 3300046476 Ga0495662_0029827 Ga0495662_0029827_789_2342 481
230 3300046477 Ga0495664_0058409 Ga0495664_0058409_552_2102 481
231 3300046507 Ga0495606_0018660 Ga0495606_0018660_1998_3548 481
232 3300046529 Ga0495652_0080548 Ga0495652_0080548_999_2549 481
233 3300046615 Ga0495656_0051513 Ga0495656_0051513_50_1600 481
234 3300046674 Ga0495588_0003750 Ga0495588_0003750_4688_6238 481
235 3300046675 Ga0495657_0004147 Ga0495657_0004147_248_1801 481
236 3300046689 Ga0495613_0022044 Ga0495613_0022044_3084_4634 481
237 3300046689 Ga0495613_0057128 Ga0495613_0057128_1084_2637 481
238 3300047318 Ga0495636_0007932 Ga0495636_0007932_349_1899 481
239 iso_pu_bacteria 2954002825 2954010925 481
240 3300046660 Ga0495625_0019314 Ga0495625_0019314_876_2438 482
241 3300047444 Ga0495675_0083288 Ga0495675_0083288_272_1825 482
242 3300030521 Ga0307511_10000706 Ga0307511_1000070613 483
243 3300031507 Ga0307509_10010908 Ga0307509_1001090810 483
244 3300047443 Ga0495687_003357 Ga0495687_003357_528_2093 483
245 iso_pu_bacteria 2582581313 2585303683 483
246 iso_pu_bacteria 2643221714 2644629173 483
247 iso_pu_bacteria 2786546132 2786668336 483
248 iso_pu_bacteria 2954673503 2954674620 483
249 iso_pu_bacteria 2954682443 2954689513 483
250 iso_pu_bacteria 2954740390 2954747104 483
251 iso_pu_bacteria 2954759201 2954766217 483
252 iso_pu_bacteria 2919468124 2919472064 484
253 3300006042 Ga0075368_10000771 Ga0075368_100007713 486
254 3300006178 Ga0075367_10001077 Ga0075367_100010775 486
255 3300030522 Ga0307512_10000948 Ga0307512_1000094832 486
256 3300050494 nmdc:mga06z11_1948_c1 nmdc:mga06z11_1948_c1_4240_5799 486
257 3300014497 Ga0182008_10003412 Ga0182008_100034129 487
258 3300015262 Ga0182007_10002475 Ga0182007_1000247510 487
259 3300041512 Ga0451853_1511634 Ga0451853_1511634_4572_6143 487
260 3300001989 JGI24739J22299_10030298 JGI24739J22299_100302981 488

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13520

AA_permease_2

Amino acid permease

72

525

0.79

PF00324

AA_permease

Amino acid permease

83

539

0.72

Structural Annotation

Top 5 Hits

ID Description Score Start End
3gi8-assembly1.cif.gz_C crystal structure of apct k158a transporter bound to 7f11 monoclonal fab fragment 0.6971 32 472
8fhn-assembly1.cif.gz_A cryo-em structure of human ncc (class 2) 0.691 48 471
3ncy-assembly1.cif.gz_B x-ray crystal structure of an arginine agmatine antiporter (adic) in complex with a fab fragment 0.6857 34 470
3l1l-assembly1.cif.gz_A-2 structure of arg-bound escherichia coli adic 0.6795 34 462
3ncy-assembly1.cif.gz_A x-ray crystal structure of an arginine agmatine antiporter (adic) in complex with a fab fragment 0.6795 34 470
ID Description Score Start End Superfamily
af_B9EWF0_29_508_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.7824 31 473 1.20.1740.10
af_O59813_45_518_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.781 36 464 1.20.1740.10
af_Q9UT18_73_572_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.7745 31 464 1.20.1740.10
af_O60113_56_528_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.7627 31 467 1.20.1740.10
af_A0A1D8PCS6_27_501_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.7561 37 464 1.20.1740.10
ID Description Score Start End GO Terms
AF-A0A399TB52-F1-model_v4 Amino acid permease 0.8737 27 474 GO:0016020
GO:0022857
AF-A0A6I2G4L3-F1-model_v4 Amino acid permease 0.8658 15 467 GO:0016020
GO:0022857
AF-A0A7T7L1A3-F1-model_v4 Amino acid permease 0.8645 1 478 GO:0016020
GO:0022857
AF-A0A378U6S2-F1-model_v4 Amino acid permease-associated region 0.8633 22 466 GO:0016020
GO:0022857
AF-A0A6I8LNH2-F1-model_v4 Urea carboxylase-related amino acid permease 0.8547 22 466 GO:0016020
GO:0022857

Feature Viewer

pLDDT pTM Quality
63.78 0.7 High
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Predicted Structure (AlphaFold2)

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