F370069

General Info

Members Datasets Scaffolds Average Seq Length
261 170 261 349

Family's Representative Sequence

Representative Sequence 3300005329|Ga0070683_100002972|Ga0070683_10000297211
Length 382
Sequence MSQNSFLKRRWKLILNIITVVALGVLVVAIHKQLISTFNRLAEVNAWFLVLLVPIQALNYHAQTKLYQGLFGVLGDRLTYRFLYRVALELNFVNHVFPSGGVSGISYFGVRVKNAEITGGKATAVQLIKLVMLFLSFEVLLIAGLLFLALGNHVNNFVILVTSIITTLMVVGTFGFVMIIGSERRIHATFSFLAQVINKTLYFFLRRSPEIINMKRAERVFGDLHTNYKVIESSWRRLRGVFVWAFMANVTEVLSIYVVYLAFGQWVNPGAVILAYAVANFAGLVSVMPGGVGIYEALMTAVLVASGVPAATSLPVTVMYRVLSTLIQVPPGWFLYHNTLLAEPKPAAPAELAQGDVPLHKTSHGSGHHSGLDSDTSNPHQS

Samples

Sample ID Description Type Environment
1 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
4 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
5 3300002244 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M1 Metagenome Rhizosphere
6 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
7 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
8 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
9 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
10 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
11 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
12 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
13 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
14 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
15 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
16 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
17 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
18 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
19 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
20 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
21 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
22 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
23 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
24 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
25 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
26 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
27 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
28 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
29 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
30 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
31 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
32 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
33 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
34 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
35 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
36 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
37 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
38 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
39 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
40 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
41 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
42 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
43 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
44 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
45 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
46 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
47 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
48 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
49 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
50 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
51 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
53 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
54 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
55 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
56 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
57 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
58 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
59 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
60 3300009986 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_92 metaG Metagenome Rhizosphere
61 3300009993 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_106 metaG Metagenome Rhizosphere
62 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
63 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
64 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
65 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
66 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
67 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
68 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
69 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
70 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
71 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
72 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
73 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
74 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
106 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
108 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
109 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
110 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
111 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
112 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
113 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
114 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
115 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
116 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
117 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
118 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
119 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
120 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
121 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
122 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
123 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
126 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
129 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
131 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
132 3300049773 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_B_4_control Metagenome Rhizosphere
133 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
135 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
136 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
137 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
138 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
139 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
140 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
141 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
142 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
143 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
144 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
145 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
146 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
147 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
148 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
149 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
150 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
151 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
152 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
153 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
154 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
155 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
156 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
157 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
158 3300053126 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 endosphere Metagenome Endosphere
159 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
160 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
161 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
162 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
163 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
164 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
165 3300053143 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 endosphere Metagenome Endosphere
166 3300053147 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 endosphere Metagenome Endosphere
167 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
168 3300053722 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 endosphere Metagenome Endosphere
169 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere
170 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 27.97
Nodule 0
Rhizoplane 0
Rhizosphere 70.11
Stem 0
Stem Tuber 0
Unclassified 1.92

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24741J21665_1003176 3300001915 Unclassified 4015
2 JGI24741J21665_1006345 3300001915 Bacteria 2380
3 JGI24740J21852_10015219 3300001979 Unclassified 2814
4 JGI24737J22298_10000002 3300001990 Bacteria 76949
5 JGI24735J21928_10000042 3300002067 Bacteria 58971
6 JGI24742J22300_10000026 3300002244 Bacteria 24449
7 rootH1_10172823 3300003316 Bacteria 1305
8 rootH2_10081006 3300003320 Bacteria 3223
9 rootH2_10294759 3300003320 Bacteria 2144
10 rootL2_10329355 3300003322 Unclassified 1716
11 rootH1_10328250 3300003323 Bacteria 1597
12 JGI25405J52794_10017080 3300003911 Bacteria 1438
13 Ga0070658_10000064 3300005327 Bacteria 106537
14 Ga0070658_10000071 3300005327 Bacteria 98592
15 Ga0070658_10010640 3300005327 Bacteria 7371
16 Ga0070658_10034923 3300005327 Bacteria 4047
17 Ga0070658_10190967 3300005327 Unclassified 1726
18 Ga0070676_10001123 3300005328 Bacteria 13375
19 Ga0070676_10006474 3300005328 Bacteria 6257
20 Ga0070683_100000130 3300005329 Bacteria 48482
21 Ga0070683_100002972 3300005329 Bacteria 13592
22 Ga0070690_100002789 3300005330 Bacteria 9431
23 Ga0070670_100085989 3300005331 Bacteria 2702
24 Ga0070680_100005055 3300005336 Bacteria 9948
25 Ga0070682_100001662 3300005337 Bacteria 12364
26 Ga0070660_100002137 3300005339 Bacteria 13647
27 Ga0070660_100004920 3300005339 Bacteria 9241
28 Ga0070668_100029307 3300005347 Bacteria 4180
29 Ga0070668_100104484 3300005347 Bacteria 2248
30 Ga0070671_100000001 3300005355 Bacteria 1228151
31 Ga0070674_100187810 3300005356 Bacteria 1587
32 Ga0070673_100000650 3300005364 Bacteria 19053
33 Ga0070659_100000797 3300005366 Bacteria 22983
34 Ga0070667_100000001 3300005367 Bacteria 1108638
35 Ga0070667_100015465 3300005367 Bacteria 6311
36 Ga0070681_10010621 3300005458 Bacteria 9100
37 Ga0070681_10065922 3300005458 Bacteria 3590
38 Ga0068867_100003799 3300005459 Bacteria 10626
39 Ga0070679_100005601 3300005530 Bacteria 11637
40 Ga0070679_100052930 3300005530 Bacteria 4041
41 Ga0070684_100000623 3300005535 Bacteria 24450
42 Ga0070684_100004611 3300005535 Bacteria 10513
43 Ga0068853_100015985 3300005539 Bacteria 6171
44 Ga0070686_100057800 3300005544 Unclassified 2493
45 Ga0070665_100298606 3300005548 Bacteria 1613
46 Ga0068855_100000003 3300005563 Bacteria 589862
47 Ga0068855_100002650 3300005563 Bacteria 22058
48 Ga0068855_100003265 3300005563 Bacteria 19847
49 Ga0068855_100111280 3300005563 Unclassified 3144
50 Ga0068857_100000011 3300005577 Bacteria 106771
51 Ga0068857_100051533 3300005577 Bacteria 3652
52 Ga0068856_100000001 3300005614 Bacteria 565602
53 Ga0068856_100003076 3300005614 Bacteria 17033
54 Ga0068863_100099196 3300005841 Unclassified 2767
55 Ga0068858_100006029 3300005842 Bacteria 11817
56 Ga0068860_100013331 3300005843 Bacteria 8059
57 Ga0068860_100140642 3300005843 Unclassified 2320
58 Ga0068862_100261214 3300005844 Bacteria 1581
59 Ga0081455_10000003 3300005937 Bacteria 367763
60 Ga0075365_10000021 3300006038 Bacteria 64483
61 Ga0075365_10091400 3300006038 Bacteria 2074
62 Ga0075368_10000062 3300006042 Bacteria 25855
63 Ga0075363_100001529 3300006048 Bacteria 8857
64 Ga0075364_10002680 3300006051 Bacteria 9996
65 Ga0075364_10009598 3300006051 Bacteria 5812
66 Ga0075364_10011717 3300006051 Bacteria 5335
67 Ga0075364_10019027 3300006051 Bacteria 4308
68 Ga0075364_10108544 3300006051 Bacteria 1851
69 Ga0075367_10000012 3300006178 Bacteria 42001
70 Ga0075367_10010029 3300006178 Bacteria 4964
71 Ga0075369_10000845 3300006186 Bacteria 10098
72 Ga0075366_10000001 3300006195 Bacteria 569172
73 Ga0075366_10000011 3300006195 Bacteria 79037
74 Ga0075366_10000134 3300006195 Bacteria 30925
75 Ga0075366_10001054 3300006195 Bacteria 13521
76 Ga0075366_10114292 3300006195 Unclassified 1625
77 Ga0075370_10001521 3300006353 Bacteria 10136
78 Ga0075370_10034784 3300006353 Unclassified 2825
79 Ga0075370_10132678 3300006353 Bacteria 1454
80 Ga0068871_100002126 3300006358 Bacteria 13428
81 Ga0075430_100006531 3300006846 Bacteria 9836
82 Ga0105240_10000003 3300009093 Bacteria 1183681
83 Ga0105240_10020081 3300009093 Bacteria 8919
84 Ga0111539_10000492 3300009094 Bacteria 50138
85 Ga0105245_10000001 3300009098 Bacteria 939270
86 Ga0105245_10000002 3300009098 Bacteria 634374
87 Ga0105245_10000093 3300009098 Bacteria 86866
88 Ga0105245_10023364 3300009098 Bacteria 5426
89 Ga0105245_10109502 3300009098 Bacteria 2567
90 Ga0105247_10186857 3300009101 Bacteria 1385
91 Ga0105243_10000001 3300009148 Bacteria 1156578
92 Ga0105243_10001490 3300009148 Bacteria 20502
93 Ga0105241_10000007 3300009174 Bacteria 343524
94 Ga0105241_10001287 3300009174 Bacteria 19137
95 Ga0105241_10179751 3300009174 Bacteria 1754
96 Ga0105242_10000002 3300009176 Bacteria 262559
97 Ga0105242_10154935 3300009176 Unclassified 2001
98 Ga0105248_10189164 3300009177 Unclassified 2320
99 Ga0105238_10150863 3300009551 Bacteria 2299
100 Ga0105249_10004977 3300009553 Bacteria 11464
101 Ga0105249_10200983 3300009553 Bacteria 1950
102 Ga0105249_10407674 3300009553 Bacteria 1391
103 Ga0105033_100513 3300009986 Bacteria 3004
104 Ga0105028_100808 3300009993 Unclassified 3340
105 Ga0105239_10041436 3300010375 Bacteria 5046
106 Ga0105239_10115550 3300010375 Unclassified 2977
107 Ga0157373_10000433 3300013100 Bacteria 33251
108 Ga0157371_10001228 3300013102 Bacteria 27259
109 Ga0157370_10211805 3300013104 Bacteria 1796
110 Ga0157369_10000104 3300013105 Bacteria 118133
111 Ga0157369_10049563 3300013105 Bacteria 4553
112 Ga0157369_10176784 3300013105 Bacteria 2247
113 Ga0157374_10000225 3300013296 Bacteria 52365
114 Ga0157374_10002444 3300013296 Bacteria 15680
115 Ga0157374_10013833 3300013296 Bacteria 7049
116 Ga0157374_10238188 3300013296 Unclassified 1789
117 Ga0157374_10399094 3300013296 Bacteria 1372
118 Ga0157378_10049112 3300013297 Bacteria 3753
119 Ga0163162_10275478 3300013306 Unclassified 1815
120 Ga0157372_10020037 3300013307 Bacteria 7211
121 Ga0163163_10018921 3300014325 Bacteria 6461
122 Ga0157379_10003265 3300014968 Bacteria 13735
123 Ga0157376_10000007 3300014969 Bacteria 368004
124 Ga0207645_10002852 3300025907 Bacteria 13403
125 Ga0207705_10000065 3300025909 Bacteria 137123
126 Ga0207705_10002239 3300025909 Bacteria 14937
127 Ga0207705_10009932 3300025909 Bacteria 6930
128 Ga0207705_10027630 3300025909 Bacteria 4047
129 Ga0207705_10096916 3300025909 Unclassified 2166
130 Ga0207654_10000002 3300025911 Bacteria 1460142
131 Ga0207654_10000975 3300025911 Bacteria 15729
132 Ga0207654_10078454 3300025911 Bacteria 1981
133 Ga0207707_10041332 3300025912 Unclassified 4027
134 Ga0207695_10000005 3300025913 Bacteria 1196715
135 Ga0207671_10019994 3300025914 Bacteria 5107
136 Ga0207660_10048516 3300025917 Bacteria 3005
137 Ga0207657_10000928 3300025919 Bacteria 31002
138 Ga0207657_10005743 3300025919 Bacteria 12944
139 Ga0207657_10092893 3300025919 Bacteria 2514
140 Ga0207652_10025896 3300025921 Bacteria 4880
141 Ga0207687_10000001 3300025927 Bacteria 1130810
142 Ga0207687_10000004 3300025927 Bacteria 841177
143 Ga0207687_10000008 3300025927 Bacteria 497738
144 Ga0207687_10000907 3300025927 Bacteria 20171
145 Ga0207687_10051722 3300025927 Bacteria 2864
146 Ga0207644_10000001 3300025931 Bacteria 1243214
147 Ga0207690_10001183 3300025932 Bacteria 16518
148 Ga0207686_10000001 3300025934 Bacteria 1169580
149 Ga0207686_10084087 3300025934 Unclassified 2084
150 Ga0207709_10000002 3300025935 Bacteria 1171536
151 Ga0207669_10099453 3300025937 Bacteria 1918
152 Ga0207704_10090295 3300025938 Unclassified 2010
153 Ga0207691_10033574 3300025940 Bacteria 4778
154 Ga0207711_10102865 3300025941 Unclassified 2529
155 Ga0207661_10000118 3300025944 Bacteria 50730
156 Ga0207661_10014375 3300025944 Bacteria 5800
157 Ga0207667_10000008 3300025949 Bacteria 625138
158 Ga0207667_10003630 3300025949 Bacteria 19042
159 Ga0207667_10003751 3300025949 Bacteria 18715
160 Ga0207651_10003766 3300025960 Bacteria 7508
161 Ga0207712_10001763 3300025961 Bacteria 14436
162 Ga0207668_10115353 3300025972 Bacteria 2023
163 Ga0207658_10000003 3300025986 Bacteria 1151934
164 Ga0207703_10004230 3300026035 Bacteria 11826
165 Ga0207678_10304449 3300026067 Unclassified 1370
166 Ga0207702_10000062 3300026078 Bacteria 124850
167 Ga0207702_10002587 3300026078 Bacteria 17015
168 Ga0207702_10003926 3300026078 Bacteria 13383
169 Ga0207641_10104699 3300026088 Unclassified 2498
170 Ga0207648_10007561 3300026089 Bacteria 10664
171 Ga0207674_10000001 3300026116 Bacteria 616581
172 Ga0207683_10001083 3300026121 Bacteria 24823
173 Ga0209813_10000002 3300027866 Bacteria 215993
174 Ga0268264_10009476 3300028381 Bacteria 8064
175 Ga0265334_10024873 3300028573 Bacteria 2426
176 Ga0265338_10128095 3300028800 Bacteria 2010
177 Ga0265327_10003876 3300031251 Bacteria 13782
178 Ga0265327_10007229 3300031251 Bacteria 8620
179 Ga0265327_10032698 3300031251 Bacteria 2908
180 Ga0395900_0221258 3300037418 Bacteria 1908
181 Ga0395898_0002453 3300037466 Bacteria 21908
182 Ga0395905_0000937 3300037471 Bacteria 37558
183 Ga0395905_0030654 3300037471 Bacteria 5065
184 Ga0395901_0231677 3300038443 Unclassified 1928
185 Ga0466963_0046012 3300044694 Bacteria 2876
186 Ga0466967_0496643 3300045976 Unclassified 1197
187 Ga0495583_0015265 3300046506 Bacteria 4185
188 Ga0495622_0000051 3300046557 Bacteria 105674
189 Ga0495658_0007346 3300046683 Bacteria 5447
190 Ga0495649_0000069 3300046694 Bacteria 90066
191 Ga0495600_0018828 3300046809 Bacteria 4405
192 Ga0495593_0084190 3300047673 Bacteria 1642
193 Ga0501032_0003447 3300049569 Bacteria 12116
194 Ga0501034_0004235 3300049571 Bacteria 16012
195 Ga0501037_0000141 3300049573 Bacteria 67142
196 Ga0501038_0008747 3300049574 Bacteria 9288
197 Ga0501043_0000145 3300049579 Bacteria 65943
198 Ga0501046_0000065 3300049580 Bacteria 116095
199 Ga0501047_0000375 3300049581 Bacteria 50494
200 Ga0501048_0000133 3300049582 Bacteria 44300
201 Ga0501070_0083501 3300049586 Bacteria 2644
202 Ga0501083_0017010 3300049744 Bacteria 5078
203 Ga0501083_0068723 3300049744 Bacteria 2357
204 Ga0501276_000430 3300049773 Bacteria 2558
205 Ga0501035_0004250 3300049822 Bacteria 13597
206 Ga0501044_0018363 3300049823 Bacteria 7494
207 nmdc:mga03683_114_c3 3300050489 Bacteria 21413
208 nmdc:mga03n38_326_c1 3300050490 Bacteria 11507
209 nmdc:mga00v17_2166_c1 3300050491 Bacteria 10097
210 nmdc:mga00v17_5785_c1 3300050491 Bacteria 6529
211 nmdc:mga0yw44_13_c1 3300050492 Bacteria 120183
212 nmdc:mga0k408_113_c1 3300050493 Bacteria 39351
213 nmdc:mga0k408_179_c1 3300050493 Bacteria 33243
214 nmdc:mga0k408_1_c1 3300050493 Bacteria 1089059
215 nmdc:mga0k408_2549_c1 3300050493 Bacteria 9680
216 nmdc:mga0k408_374_c1 3300050493 Bacteria 24527
217 nmdc:mga0k408_685_c1 3300050493 Bacteria 18586
218 nmdc:mga06z11_31_c1 3300050494 Bacteria 57393
219 nmdc:mga06z11_74_c1 3300050494 Bacteria 42014
220 nmdc:mga04h51_2_c1 3300050495 Bacteria 215993
221 nmdc:mga07m45_137363_c1 3300050496 Bacteria 1415
222 nmdc:mga07m45_18705_c3 3300050496 Bacteria 1858
223 nmdc:mga07m45_34401_c1 3300050496 Bacteria 2816
224 nmdc:mga0qj67_22127_c1 3300050509 Bacteria 4880
225 nmdc:mga08y16_2629_c1 3300050511 Bacteria 18453
226 nmdc:mga0sz30_1_c1 3300050516 Bacteria 796501
227 nmdc:mga0sz30_4_c1 3300050516 Bacteria 84956
228 Ga0500610_0000002 3300053079 Bacteria 166752
229 Ga0500643_000011 3300053087 Bacteria 385630
230 Ga0500643_002840 3300053087 Bacteria 8637
231 Ga0500644_0000198 3300053088 Bacteria 36907
232 Ga0500644_0003982 3300053088 Bacteria 3675
233 Ga0500583_0000057 3300053092 Bacteria 71874
234 Ga0500583_0002259 3300053092 Bacteria 5741
235 Ga0500583_0023945 3300053092 Unclassified 2582
236 Ga0500651_0000381 3300053093 Bacteria 24265
237 Ga0500651_0013337 3300053093 Bacteria 5006
238 Ga0500566_0000001 3300053094 Bacteria 1101031
239 Ga0500650_0000001 3300053098 Bacteria 818797
240 Ga0500555_000001 3300053103 Bacteria 1353713
241 Ga0500555_000002 3300053103 Bacteria 1314346
242 Ga0500562_000002 3300053108 Bacteria 977234
243 Ga0500562_003874 3300053108 Bacteria 3771
244 Ga0500593_000001 3300053117 Bacteria 784404
245 Ga0500594_0000001 3300053118 Bacteria 1178472
246 Ga0500594_0000311 3300053118 Bacteria 10932
247 Ga0500614_000001 3300053123 Bacteria 1274484
248 Ga0500614_002302 3300053123 Bacteria 4284
249 Ga0500621_026524 3300053126 Bacteria 2275
250 Ga0500628_000009 3300053129 Bacteria 122386
251 Ga0500642_0008021 3300053130 Bacteria 3586
252 Ga0500652_000119 3300053131 Bacteria 30219
253 Ga0500655_000400 3300053133 Bacteria 9181
254 Ga0500559_0004450 3300053136 Bacteria 6654
255 Ga0500561_0000001 3300053137 Bacteria 957685
256 Ga0500579_002076 3300053143 Bacteria 11828
257 Ga0500589_000002 3300053147 Bacteria 245055
258 Ga0500633_0012849 3300053160 Unclassified 2326
259 Ga0500649_000002 3300053722 Bacteria 145889
260 Ga0500611_007112 3300053727 Bacteria 1665
261 Ga0501082_0032119 3300060353 Bacteria 4529

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300053117 Ga0500593_000001 Ga0500593_000001_362727_363770 316
2 3300005327 Ga0070658_10010640 Ga0070658_100106402 318
3 3300005336 Ga0070680_100005055 Ga0070680_10000505510 318
4 3300005339 Ga0070660_100004920 Ga0070660_10000492010 318
5 3300005458 Ga0070681_10065922 Ga0070681_100659221 318
6 3300005530 Ga0070679_100052930 Ga0070679_1000529302 318
7 3300009174 Ga0105241_10001287 Ga0105241_100012879 318
8 3300013307 Ga0157372_10020037 Ga0157372_100200373 318
9 3300025909 Ga0207705_10009932 Ga0207705_100099328 318
10 3300025911 Ga0207654_10000975 Ga0207654_100009754 318
11 3300025917 Ga0207660_10048516 Ga0207660_100485162 318
12 3300025919 Ga0207657_10000928 Ga0207657_100009286 318
13 3300003323 rootH1_10328250 rootH1_103282501 323
14 3300006042 Ga0075368_10000062 Ga0075368_1000006217 323
15 3300006048 Ga0075363_100001529 Ga0075363_10000152910 323
16 3300006178 Ga0075367_10010029 Ga0075367_100100295 323
17 3300006353 Ga0075370_10001521 Ga0075370_100015217 323
18 3300027866 Ga0209813_10000002 Ga0209813_10000002102 323
19 3300050490 nmdc:mga03n38_326_c1 nmdc:mga03n38_326_c1_9844_10893 323
20 3300050494 nmdc:mga06z11_31_c1 nmdc:mga06z11_31_c1_39575_40624 323
21 3300050495 nmdc:mga04h51_2_c1 nmdc:mga04h51_2_c1_122622_123671 323
22 3300050496 nmdc:mga07m45_34401_c1 nmdc:mga07m45_34401_c1_350_1399 323
23 3300013296 Ga0157374_10002444 Ga0157374_100024448 324
24 3300025961 Ga0207712_10001763 Ga0207712_1000176315 325
25 3300049744 Ga0501083_0068723 Ga0501083_0068723_1197_2264 325
26 3300009094 Ga0111539_10000492 Ga0111539_1000049241 329
27 3300031251 Ga0265327_10003876 Ga0265327_100038762 329
28 3300049569 Ga0501032_0003447 Ga0501032_0003447_7529_8608 329
29 3300049571 Ga0501034_0004235 Ga0501034_0004235_7620_8699 329
30 3300049573 Ga0501037_0000141 Ga0501037_0000141_13792_14871 329
31 3300049574 Ga0501038_0008747 Ga0501038_0008747_7260_8339 329
32 3300049579 Ga0501043_0000145 Ga0501043_0000145_31239_32318 329
33 3300049580 Ga0501046_0000065 Ga0501046_0000065_86267_87346 329
34 3300049581 Ga0501047_0000375 Ga0501047_0000375_45891_46970 329
35 3300049582 Ga0501048_0000133 Ga0501048_0000133_18194_19273 329
36 3300049586 Ga0501070_0083501 Ga0501070_0083501_329_1408 329
37 3300049822 Ga0501035_0004250 Ga0501035_0004250_9674_10753 329
38 3300049823 Ga0501044_0018363 Ga0501044_0018363_1079_2158 329
39 3300050511 nmdc:mga08y16_2629_c1 nmdc:mga08y16_2629_c1_5798_6865 329
40 3300060353 Ga0501082_0032119 Ga0501082_0032119_2916_3995 329
41 3300005328 Ga0070676_10006474 Ga0070676_100064742 332
42 3300005364 Ga0070673_100000650 Ga0070673_10000065021 332
43 3300005539 Ga0068853_100015985 Ga0068853_1000159859 332
44 3300013105 Ga0157369_10049563 Ga0157369_100495635 332
45 3300025919 Ga0207657_10092893 Ga0207657_100928932 332
46 3300025937 Ga0207669_10099453 Ga0207669_100994531 332
47 3300025940 Ga0207691_10033574 Ga0207691_100335747 332
48 3300045976 Ga0466967_0496643 Ga0466967_0496643_60_1097 334
49 3300053087 Ga0500643_002840 Ga0500643_002840_4283_5344 334
50 3300053103 Ga0500555_000002 Ga0500555_000002_109655_110716 334
51 3300053108 Ga0500562_003874 Ga0500562_003874_2581_3642 334
52 3300053131 Ga0500652_000119 Ga0500652_000119_25149_26210 334
53 3300005327 Ga0070658_10034923 Ga0070658_100349235 337
54 3300005339 Ga0070660_100002137 Ga0070660_1000021376 337
55 3300005366 Ga0070659_100000797 Ga0070659_10000079714 337
56 3300005530 Ga0070679_100005601 Ga0070679_1000056016 337
57 3300005563 Ga0068855_100002650 Ga0068855_10000265013 337
58 3300005577 Ga0068857_100000011 Ga0068857_1000000115 337
59 3300006195 Ga0075366_10000011 Ga0075366_1000001143 337
60 3300025909 Ga0207705_10027630 Ga0207705_100276302 337
61 3300025919 Ga0207657_10005743 Ga0207657_100057432 337
62 3300025921 Ga0207652_10025896 Ga0207652_100258964 337
63 3300025932 Ga0207690_10001183 Ga0207690_1000118311 337
64 3300025949 Ga0207667_10003630 Ga0207667_100036305 337
65 3300026116 Ga0207674_10000001 Ga0207674_1000000172 337
66 3300050493 nmdc:mga0k408_179_c1 nmdc:mga0k408_179_c1_29356_30414 337
67 3300009553 Ga0105249_10004977 Ga0105249_100049772 338
68 3300003322 rootL2_10329355 rootL2_103293552 339
69 3300005548 Ga0070665_100298606 Ga0070665_1002986062 339
70 3300006195 Ga0075366_10000134 Ga0075366_1000013430 339
71 3300049744 Ga0501083_0017010 Ga0501083_0017010_3033_4097 339
72 3300050493 nmdc:mga0k408_113_c1 nmdc:mga0k408_113_c1_9014_10078 339
73 3300005327 Ga0070658_10190967 Ga0070658_101909672 340
74 3300005577 Ga0068857_100051533 Ga0068857_1000515332 340
75 3300006846 Ga0075430_100006531 Ga0075430_1000065317 340
76 3300025909 Ga0207705_10096916 Ga0207705_100969162 340
77 3300050509 nmdc:mga0qj67_22127_c1 nmdc:mga0qj67_22127_c1_425_1492 340
78 3300005337 Ga0070682_100001662 Ga0070682_10000166211 341
79 3300009176 Ga0105242_10154935 Ga0105242_101549352 341
80 3300009553 Ga0105249_10200983 Ga0105249_102009832 341
81 3300025934 Ga0207686_10084087 Ga0207686_100840872 341
82 3300005327 Ga0070658_10000071 Ga0070658_10000071104 342
83 3300005356 Ga0070674_100187810 Ga0070674_1001878101 342
84 3300010375 Ga0105239_10041436 Ga0105239_100414365 342
85 3300013296 Ga0157374_10399094 Ga0157374_103990941 342
86 3300013297 Ga0157378_10049112 Ga0157378_100491123 342
87 3300025909 Ga0207705_10000065 Ga0207705_10000065129 342
88 3300025960 Ga0207651_10003766 Ga0207651_100037662 342
89 3300026121 Ga0207683_10001083 Ga0207683_1000108311 342
90 3300046506 Ga0495583_0015265 Ga0495583_0015265_1253_2320 342
91 3300005367 Ga0070667_100015465 Ga0070667_1000154652 343
92 3300005544 Ga0070686_100057800 Ga0070686_1000578002 343
93 3300005563 Ga0068855_100111280 Ga0068855_1001112801 343
94 3300005843 Ga0068860_100140642 Ga0068860_1001406422 343
95 3300009177 Ga0105248_10189164 Ga0105248_101891642 343
96 3300025941 Ga0207711_10102865 Ga0207711_101028652 343
97 3300028573 Ga0265334_10024873 Ga0265334_100248732 343
98 3300028800 Ga0265338_10128095 Ga0265338_101280952 343
99 3300053137 Ga0500561_0000001 Ga0500561_0000001_111979_113040 344
100 3300005841 Ga0068863_100099196 Ga0068863_1000991962 345
101 3300013296 Ga0157374_10000225 Ga0157374_1000022522 345
102 3300014968 Ga0157379_10003265 Ga0157379_100032657 345
103 3300026088 Ga0207641_10104699 Ga0207641_101046991 345
104 3300006038 Ga0075365_10091400 Ga0075365_100914002 346
105 3300006051 Ga0075364_10009598 Ga0075364_100095986 346
106 3300006051 Ga0075364_10019027 Ga0075364_100190272 346
107 3300006358 Ga0068871_100002126 Ga0068871_10000212611 346
108 3300009098 Ga0105245_10000002 Ga0105245_10000002597 346
109 3300025927 Ga0207687_10000001 Ga0207687_10000001614 346
110 3300025927 Ga0207687_10000008 Ga0207687_10000008504 346
111 3300046557 Ga0495622_0000051 Ga0495622_0000051_47395_48456 346
112 3300046683 Ga0495658_0007346 Ga0495658_0007346_2330_3391 346
113 3300046809 Ga0495600_0018828 Ga0495600_0018828_2712_3773 346
114 3300047673 Ga0495593_0084190 Ga0495593_0084190_67_1128 346
115 3300050491 nmdc:mga00v17_5785_c1 nmdc:mga00v17_5785_c1_3389_4459 346
116 3300053079 Ga0500610_0000002 Ga0500610_0000002_71833_72936 346
117 3300053088 Ga0500644_0000198 Ga0500644_0000198_30916_32019 346
118 3300053094 Ga0500566_0000001 Ga0500566_0000001_979415_980476 346
119 3300053123 Ga0500614_002302 Ga0500614_002302_1990_3051 346
120 3300053136 Ga0500559_0004450 Ga0500559_0004450_3355_4416 346
121 3300003320 rootH2_10294759 rootH2_102947592 347
122 3300005563 Ga0068855_100003265 Ga0068855_1000032659 347
123 3300006186 Ga0075369_10000845 Ga0075369_100008454 347
124 3300006195 Ga0075366_10000001 Ga0075366_1000000175 347
125 3300006353 Ga0075370_10034784 Ga0075370_100347841 347
126 3300025949 Ga0207667_10003751 Ga0207667_100037519 347
127 3300031251 Ga0265327_10032698 Ga0265327_100326983 347
128 3300050493 nmdc:mga0k408_1_c1 nmdc:mga0k408_1_c1_1003997_1005073 347
129 3300050496 nmdc:mga07m45_137363_c1 nmdc:mga07m45_137363_c1_54_1100 347
130 3300050516 nmdc:mga0sz30_4_c1 nmdc:mga0sz30_4_c1_82260_83336 347
131 3300005330 Ga0070690_100002789 Ga0070690_10000278910 348
132 3300006051 Ga0075364_10002680 Ga0075364_100026803 348
133 3300014325 Ga0163163_10018921 Ga0163163_100189215 348
134 3300050491 nmdc:mga00v17_2166_c1 nmdc:mga00v17_2166_c1_4812_5885 348
135 3300003316 rootH1_10172823 rootH1_101728232 349
136 3300005844 Ga0068862_100261214 Ga0068862_1002612142 349
137 3300037471 Ga0395905_0000937 Ga0395905_0000937_22457_23512 349
138 3300002244 JGI24742J22300_10000026 JGI24742J22300_100000265 350
139 3300005327 Ga0070658_10000064 Ga0070658_1000006471 350
140 3300005328 Ga0070676_10001123 Ga0070676_100011234 350
141 3300005329 Ga0070683_100000130 Ga0070683_10000013033 350
142 3300005331 Ga0070670_100085989 Ga0070670_1000859893 350
143 3300005355 Ga0070671_100000001 Ga0070671_100000001106 350
144 3300005367 Ga0070667_100000001 Ga0070667_1000000011082 350
145 3300005535 Ga0070684_100000623 Ga0070684_1000006239 350
146 3300005843 Ga0068860_100013331 Ga0068860_10001333110 350
147 3300013296 Ga0157374_10013833 Ga0157374_100138339 350
148 3300025907 Ga0207645_10002852 Ga0207645_1000285216 350
149 3300025909 Ga0207705_10002239 Ga0207705_100022396 350
150 3300025931 Ga0207644_10000001 Ga0207644_100000011326 350
151 3300025944 Ga0207661_10000118 Ga0207661_1000011825 350
152 3300025986 Ga0207658_10000003 Ga0207658_10000003299 350
153 3300028381 Ga0268264_10009476 Ga0268264_1000947610 350
154 3300031251 Ga0265327_10007229 Ga0265327_100072293 350
155 3300003911 JGI25405J52794_10017080 JGI25405J52794_100170802 351
156 3300005347 Ga0070668_100029307 Ga0070668_1000293072 351
157 3300005937 Ga0081455_10000003 Ga0081455_1000000343 351
158 3300006178 Ga0075367_10000012 Ga0075367_1000001236 351
159 3300006195 Ga0075366_10001054 Ga0075366_100010549 351
160 3300009098 Ga0105245_10109502 Ga0105245_101095023 351
161 3300009148 Ga0105243_10001490 Ga0105243_1000149011 351
162 3300013102 Ga0157371_10001228 Ga0157371_100012286 351
163 3300013105 Ga0157369_10176784 Ga0157369_101767842 351
164 3300025927 Ga0207687_10051722 Ga0207687_100517222 351
165 3300026078 Ga0207702_10003926 Ga0207702_100039262 351
166 3300050493 nmdc:mga0k408_685_c1 nmdc:mga0k408_685_c1_3838_4965 351
167 3300050494 nmdc:mga06z11_74_c1 nmdc:mga06z11_74_c1_6781_7908 351
168 3300053092 Ga0500583_0023945 Ga0500583_0023945_678_1733 351
169 3300053093 Ga0500651_0000381 Ga0500651_0000381_3861_4922 351
170 3300053093 Ga0500651_0013337 Ga0500651_0013337_2678_3739 351
171 3300053098 Ga0500650_0000001 Ga0500650_0000001_809059_810114 351
172 3300053118 Ga0500594_0000001 Ga0500594_0000001_292444_293499 351
173 3300053133 Ga0500655_000400 Ga0500655_000400_6255_7310 351
174 3300053143 Ga0500579_002076 Ga0500579_002076_6187_7242 351
175 3300053160 Ga0500633_0012849 Ga0500633_0012849_216_1271 351
176 3300003320 rootH2_10081006 rootH2_100810062 352
177 3300005458 Ga0070681_10010621 Ga0070681_1001062111 352
178 3300009098 Ga0105245_10000001 Ga0105245_1000000183 352
179 3300009551 Ga0105238_10150863 Ga0105238_101508632 352
180 3300025912 Ga0207707_10041332 Ga0207707_100413324 352
181 3300025927 Ga0207687_10000004 Ga0207687_10000004184 352
182 3300037418 Ga0395900_0221258 Ga0395900_0221258_230_1306 352
183 3300038443 Ga0395901_0231677 Ga0395901_0231677_25_1095 352
184 3300046694 Ga0495649_0000069 Ga0495649_0000069_43440_44498 352
185 3300053092 Ga0500583_0002259 Ga0500583_0002259_1254_2312 352
186 3300053103 Ga0500555_000001 Ga0500555_000001_1221765_1222871 352
187 3300053727 Ga0500611_007112 Ga0500611_007112_574_1632 352
188 3300001990 JGI24737J22298_10000002 JGI24737J22298_1000000229 353
189 3300002067 JGI24735J21928_10000042 JGI24735J21928_100000426 353
190 3300005459 Ga0068867_100003799 Ga0068867_1000037994 353
191 3300006051 Ga0075364_10011717 Ga0075364_100117175 353
192 3300006051 Ga0075364_10108544 Ga0075364_101085442 353
193 3300009093 Ga0105240_10000003 Ga0105240_100000031207 353
194 3300009098 Ga0105245_10000093 Ga0105245_1000009366 353
195 3300009098 Ga0105245_10023364 Ga0105245_100233646 353
196 3300009148 Ga0105243_10000001 Ga0105243_1000000172 353
197 3300009176 Ga0105242_10000002 Ga0105242_10000002210 353
198 3300009993 Ga0105028_100808 Ga0105028_1008083 353
199 3300010375 Ga0105239_10115550 Ga0105239_101155503 353
200 3300013296 Ga0157374_10238188 Ga0157374_102381882 353
201 3300013306 Ga0163162_10275478 Ga0163162_102754782 353
202 3300014969 Ga0157376_10000007 Ga0157376_1000000791 353
203 3300025913 Ga0207695_10000005 Ga0207695_100000051218 353
204 3300025914 Ga0207671_10019994 Ga0207671_100199946 353
205 3300025927 Ga0207687_10000907 Ga0207687_100009078 353
206 3300025934 Ga0207686_10000001 Ga0207686_100000011072 353
207 3300025935 Ga0207709_10000002 Ga0207709_100000021189 353
208 3300025938 Ga0207704_10090295 Ga0207704_100902952 353
209 3300026067 Ga0207678_10304449 Ga0207678_103044491 353
210 3300026089 Ga0207648_10007561 Ga0207648_100075614 353
211 3300037466 Ga0395898_0002453 Ga0395898_0002453_17419_18486 353
212 3300037471 Ga0395905_0030654 Ga0395905_0030654_3202_4269 353
213 3300044694 Ga0466963_0046012 Ga0466963_0046012_1188_2258 353
214 3300050489 nmdc:mga03683_114_c3 nmdc:mga03683_114_c3_10344_11417 353
215 3300050493 nmdc:mga0k408_374_c1 nmdc:mga0k408_374_c1_4185_5267 353
216 3300050516 nmdc:mga0sz30_1_c1 nmdc:mga0sz30_1_c1_732687_733754 353
217 3300053092 Ga0500583_0000057 Ga0500583_0000057_58417_59484 353
218 3300053108 Ga0500562_000002 Ga0500562_000002_126281_127342 353
219 3300053126 Ga0500621_026524 Ga0500621_026524_924_1991 353
220 3300053130 Ga0500642_0008021 Ga0500642_0008021_520_1587 353
221 3300053147 Ga0500589_000002 Ga0500589_000002_113557_114624 353
222 3300006038 Ga0075365_10000021 Ga0075365_1000002164 355
223 3300006353 Ga0075370_10132678 Ga0075370_101326782 355
224 3300050492 nmdc:mga0yw44_13_c1 nmdc:mga0yw44_13_c1_22380_23447 355
225 3300050496 nmdc:mga07m45_18705_c3 nmdc:mga07m45_18705_c3_218_1285 355
226 3300053087 Ga0500643_000011 Ga0500643_000011_272122_273240 355
227 3300001915 JGI24741J21665_1006345 JGI24741J21665_10063452 356
228 3300006195 Ga0075366_10114292 Ga0075366_101142921 356
229 3300049773 Ga0501276_000430 Ga0501276_000430_999_2069 356
230 3300050493 nmdc:mga0k408_2549_c1 nmdc:mga0k408_2549_c1_8089_9159 356
231 3300009986 Ga0105033_100513 Ga0105033_1005132 357
232 3300053123 Ga0500614_000001 Ga0500614_000001_1164104_1165177 357
233 3300053722 Ga0500649_000002 Ga0500649_000002_46798_47871 357
234 3300005614 Ga0068856_100000001 Ga0068856_100000001592 359
235 3300005842 Ga0068858_100006029 Ga0068858_1000060299 359
236 3300026035 Ga0207703_10004230 Ga0207703_100042304 359
237 3300026078 Ga0207702_10000062 Ga0207702_1000006268 359
238 3300005347 Ga0070668_100104484 Ga0070668_1001044842 360
239 3300009553 Ga0105249_10407674 Ga0105249_104076743 360
240 3300025972 Ga0207668_10115353 Ga0207668_101153532 360
241 3300009101 Ga0105247_10186857 Ga0105247_101868572 361
242 3300005329 Ga0070683_100002972 Ga0070683_10000297211 362
243 3300005535 Ga0070684_100004611 Ga0070684_10000461111 362
244 3300005563 Ga0068855_100000003 Ga0068855_100000003581 362
245 3300005614 Ga0068856_100003076 Ga0068856_10000307613 362
246 3300009093 Ga0105240_10020081 Ga0105240_1002008110 362
247 3300009174 Ga0105241_10000007 Ga0105241_1000000786 362
248 3300009174 Ga0105241_10179751 Ga0105241_101797512 362
249 3300013100 Ga0157373_10000433 Ga0157373_1000043321 362
250 3300013104 Ga0157370_10211805 Ga0157370_102118052 362
251 3300013105 Ga0157369_10000104 Ga0157369_1000010462 362
252 3300025911 Ga0207654_10000002 Ga0207654_100000021460 362
253 3300025911 Ga0207654_10078454 Ga0207654_100784542 362
254 3300025944 Ga0207661_10014375 Ga0207661_100143754 362
255 3300025949 Ga0207667_10000008 Ga0207667_10000008571 362
256 3300026078 Ga0207702_10002587 Ga0207702_1000258713 362
257 3300053088 Ga0500644_0003982 Ga0500644_0003982_1018_2148 362
258 3300053118 Ga0500594_0000311 Ga0500594_0000311_8137_9264 362
259 3300053129 Ga0500628_000009 Ga0500628_000009_67411_68541 362
260 3300001915 JGI24741J21665_1003176 JGI24741J21665_10031762 363
261 3300001979 JGI24740J21852_10015219 JGI24740J21852_100152192 363

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03706

LPG_synthase_TM

Lysylphosphatidylglycerol synthase TM region

14

332

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
7f47-assembly1.cif.gz_A cryo-em structure of rhizobium etli mprf 0.6488 18 332
7duw-assembly1.cif.gz_B cryo-em structure of the multiple peptide resistance factor (mprf) loaded with two lysyl-phosphatidylglycerol molecules 0.6368 8 351
6lvf-assembly1.cif.gz_A cryo-em structure of the multiple peptide resistance factor (mprf) loaded with one lysyl-phosphatidylglycerol molecule 0.5976 13 343
7duw-assembly1.cif.gz_B cryo-em structure of the multiple peptide resistance factor (mprf) loaded with two lysyl-phosphatidylglycerol molecules 0.5523 8 351
7f47-assembly1.cif.gz_A cryo-em structure of rhizobium etli mprf 0.5164 18 332
ID Description Score Start End Superfamily
af_Q9FLW1_79_442_1.20.1530.20 Mainly Alpha;Up-down Bundle;Na+/H+ antiporter like fold; 0.2832 36 337 1.20.1530.20
af_Q4PIV7_1_183_1.20.140.150 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3; 0.2743 128 246 1.20.140.150
af_Q01926_142_303_1.20.58.340 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;Magnesium transport protein CorA, transmembrane region 0.263 100 256 1.20.58.340
af_Q19351_235_404_1.20.58.390 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;Neurotransmitter-gated ion-channel transmembrane domain 0.2582 90 266 1.20.58.390
af_Q19351_235_404_1.20.58.390 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;Neurotransmitter-gated ion-channel transmembrane domain 0.2518 90 266 1.20.58.390
ID Description Score Start End GO Terms
AF-A0A563CIZ7-F1-model_v4 Flippase-like domain-containing protein 0.9145 14 265 GO:0005886
AF-A0A1F7QYU9-F1-model_v4 TIGR00374 family protein 0.89 3 344 GO:0005886
AF-A0A7C3K597-F1-model_v4 Flippase-like domain-containing protein 0.8885 8 344 GO:0005886
AF-A0A523C460-F1-model_v4 Phosphatidylglycerol lysyltransferase (EC 2.3.2.3) (Lysylphosphatidylglycerol synthase) 0.8845 9 343 GO:0005886
GO:0006629
GO:0046677
GO:0050071
AF-A0A2T2QZ33-F1-model_v4 TIGR00374 family protein 0.8838 64 350 GO:0005886

Feature Viewer

pLDDT pTM Quality
75.69 0.74 High
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Predicted Structure (AlphaFold2)

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