F370108

General Info

Members Datasets Scaffolds Average Seq Length
261 187 522 227

Family's Representative Sequence

Representative Sequence 3300005340|Ga0070689_100000001|Ga0070689_1000000011137
Length 265
Sequence MLTRRDRITPAVGAAVLGSAEMSPSGSDSSPRPPGGLTPPSLDKRLVVTIDGPAGAGKSTAARLLAERLGYSLLDTGAIYRAVALVARQQGIPWDDGPTLGTLALGLPIRFAFRDGVNRVLVGDADLTTDIRAPEISDGASRVSALPEVRAGLLELQRRLAAQGGVVVEGRDVGTVVFPQAGAKFFLTATATERARRRTAELAAAGRPADEQAVLAEILVRDDRDTNRAVAPLRKADDAVQIDSDGLGIEQVVDRLVAEVRRRAA

Samples

Sample ID Description Type Environment
1 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
11 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
12 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
13 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
14 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
15 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
16 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
17 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
18 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
19 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
20 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
21 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
22 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
23 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
24 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
25 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
26 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
27 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
28 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
29 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
30 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
31 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
32 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
33 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
34 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
35 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
36 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
37 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
38 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
39 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
40 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
41 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
42 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
43 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
44 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
45 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
46 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
47 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
48 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
49 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
50 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
52 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
53 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
54 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
55 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
56 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
57 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
58 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
59 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
60 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
61 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
62 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
63 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
64 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
65 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
66 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
67 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
68 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
104 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
107 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
108 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
109 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
110 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
111 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
112 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
113 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
114 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
115 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
116 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
117 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
118 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
119 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
120 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
121 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
122 3300034818 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 Metagenome Rhizosphere
123 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
124 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
125 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
126 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
127 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
128 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
129 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
130 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
131 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
132 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
133 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
134 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
135 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
136 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
137 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
138 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
139 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
140 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
141 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
142 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
143 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
144 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
145 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
146 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
147 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
148 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
149 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
150 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
151 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
152 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
153 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
154 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
155 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
156 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
157 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
158 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
159 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
160 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
161 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
162 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
163 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
164 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
165 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
166 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
167 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
168 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
169 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
170 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
171 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
172 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
173 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
174 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
175 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
176 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
177 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
178 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
179 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
180 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
181 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
182 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
183 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
184 2919085039 Luteibacter sp. 1214 Isolate Unclassified
185 2920107658 Aquisphaera insulae JC669 Isolate Rhizosphere
186 2935390628 Streptomyces sp. PvR034 Isolate Rhizosphere
187 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.79
Metatranscriptomes 2.68
Isolates 1.53

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 2.3
Rhizosphere 93.87
Stem 0
Stem Tuber 0
Unclassified 2.3

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070689_100000001 3300005340 Bacteria 1334580
2 rootH2_10207027 3300003320 Bacteria 5237
3 rootH1_10201074 3300003323 Bacteria 2210
4 rootH1_10234209 3300003323 Unclassified 2215
5 rootH1_10308355 3300003323 Bacteria 2426
6 Ga0070658_10000163 3300005327 Bacteria 57740
7 Ga0070658_10284891 3300005327 Bacteria 1407
8 Ga0070683_100258661 3300005329 Bacteria 1656
9 Ga0070683_100359042 3300005329 Bacteria 1388
10 Ga0070690_100007575 3300005330 Bacteria 6215
11 Ga0070690_100010327 3300005330 Bacteria 5430
12 Ga0070670_100129837 3300005331 Bacteria 2176
13 Ga0068869_100396909 3300005334 Bacteria 1134
14 Ga0070680_100014678 3300005336 Bacteria 6125
15 Ga0070682_100006062 3300005337 Bacteria 6768
16 Ga0068868_100346064 3300005338 Bacteria 1272
17 Ga0070689_100002701 3300005340 Bacteria 11619
18 Ga0070689_100205357 3300005340 Bacteria 1610
19 Ga0070691_10119029 3300005341 Bacteria 1328
20 Ga0070668_100068667 3300005347 Bacteria 2755
21 Ga0070669_100141629 3300005353 Bacteria 1854
22 Ga0070675_100494583 3300005354 Bacteria 1101
23 Ga0070674_100026811 3300005356 Bacteria 3768
24 Ga0070673_100001297 3300005364 Bacteria 14563
25 Ga0070673_100072682 3300005364 Bacteria 2766
26 Ga0070673_100087190 3300005364 Bacteria 2544
27 Ga0070688_100014835 3300005365 Bacteria 4422
28 Ga0070659_100263120 3300005366 Bacteria 1431
29 Ga0070667_100083754 3300005367 Bacteria 2732
30 Ga0070667_100347015 3300005367 Bacteria 1343
31 Ga0070701_10121417 3300005438 Bacteria 1473
32 Ga0070705_100452351 3300005440 Bacteria 964
33 Ga0070708_100066139 3300005445 Bacteria 3244
34 Ga0070678_100023154 3300005456 Bacteria 4134
35 Ga0070678_100821215 3300005456 Bacteria 845
36 Ga0070662_100522702 3300005457 Bacteria 992
37 Ga0070681_10443756 3300005458 Unclassified 1210
38 Ga0068867_100030089 3300005459 Bacteria 3916
39 Ga0070685_10024701 3300005466 Bacteria 3303
40 Ga0070698_100224429 3300005471 Bacteria 1812
41 Ga0070698_100457580 3300005471 Bacteria 1212
42 Ga0070699_100092696 3300005518 Bacteria 2642
43 Ga0070679_100000382 3300005530 Bacteria 37728
44 Ga0070679_100005475 3300005530 Bacteria 11767
45 Ga0070684_100002036 3300005535 Bacteria 14884
46 Ga0068853_100008682 3300005539 Bacteria 8173
47 Ga0070672_100072006 3300005543 Bacteria 2751
48 Ga0070672_100144108 3300005543 Bacteria 1967
49 Ga0070696_100056784 3300005546 Bacteria 2731
50 Ga0070665_100006032 3300005548 Bacteria 12382
51 Ga0068857_100101564 3300005577 Bacteria 2581
52 Ga0068857_100408577 3300005577 Bacteria 1264
53 Ga0068856_100194560 3300005614 Bacteria 2042
54 Ga0068856_100267758 3300005614 Bacteria 1724
55 Ga0068856_100533390 3300005614 Bacteria 1195
56 Ga0070702_100119654 3300005615 Bacteria 1647
57 Ga0068852_100276316 3300005616 Unclassified 1618
58 Ga0068864_100518567 3300005618 Bacteria 1149
59 Ga0068866_10020569 3300005718 Bacteria 3026
60 Ga0068861_100025995 3300005719 Bacteria 4251
61 Ga0068863_100128307 3300005841 Bacteria 2420
62 Ga0068863_100210637 3300005841 Bacteria 1872
63 Ga0068863_100297626 3300005841 Bacteria 1565
64 Ga0068858_100062023 3300005842 Bacteria 3456
65 Ga0068858_100314759 3300005842 Bacteria 1495
66 Ga0068860_100035496 3300005843 Bacteria 4782
67 Ga0068862_100080507 3300005844 Bacteria 2824
68 Ga0068865_100131959 3300006881 Bacteria 1872
69 Ga0068865_100339893 3300006881 Bacteria 1213
70 Ga0105240_10001211 3300009093 Bacteria 44946
71 Ga0114129_10091822 3300009147 Bacteria 4206
72 Ga0105248_10208610 3300009177 Bacteria 2201
73 Ga0105237_10000006 3300009545 Bacteria 380316
74 Ga0105237_10075161 3300009545 Bacteria 3370
75 Ga0105238_10024935 3300009551 Bacteria 6095
76 Ga0105238_10248684 3300009551 Bacteria 1756
77 Ga0105239_10154720 3300010375 Bacteria 2560
78 Ga0157370_10005948 3300013104 Bacteria 13584
79 Ga0157369_10008216 3300013105 Bacteria 11969
80 Ga0157378_10172907 3300013297 Bacteria 2027
81 Ga0157378_10507381 3300013297 Bacteria 1206
82 Ga0163163_11555143 3300014325 Bacteria 723
83 Ga0157377_10240196 3300014745 Bacteria 1169
84 Ga0157379_10080228 3300014968 Bacteria 2923
85 Ga0182005_1000054 3300015265 Bacteria 112885
86 Ga0197907_10583741 3300020069 Bacteria 1688
87 Ga0206350_10840806 3300020080 Bacteria 1487
88 Ga0206354_10101505 3300020081 Bacteria 1969
89 Ga0206354_10887736 3300020081 Bacteria 2669
90 Ga0206353_10725075 3300020082 Bacteria 1930
91 Ga0213875_10004007 3300021388 Bacteria 8211
92 Ga0224712_10006322 3300022467 Bacteria 3368
93 Ga0207642_10004765 3300025899 Bacteria 4383
94 Ga0207645_10001957 3300025907 Bacteria 16582
95 Ga0207705_10051626 3300025909 Bacteria 2960
96 Ga0207707_10236495 3300025912 Bacteria 1589
97 Ga0207695_10002465 3300025913 Bacteria 27298
98 Ga0207671_10000070 3300025914 Bacteria 160216
99 Ga0207662_10225434 3300025918 Bacteria 1222
100 Ga0207652_10001790 3300025921 Bacteria 18699
101 Ga0207652_10002710 3300025921 Bacteria 14865
102 Ga0207652_10045504 3300025921 Bacteria 3742
103 Ga0207681_10002933 3300025923 Bacteria 10764
104 Ga0207694_10010851 3300025924 Bacteria 6877
105 Ga0207694_10208389 3300025924 Bacteria 1592
106 Ga0207650_10048691 3300025925 Bacteria 3127
107 Ga0207650_10082216 3300025925 Bacteria 2444
108 Ga0207644_10658701 3300025931 Bacteria 872
109 Ga0207690_10353308 3300025932 Bacteria 1163
110 Ga0207670_10000014 3300025936 Bacteria 178499
111 Ga0207670_10019191 3300025936 Bacteria 4171
112 Ga0207670_10045834 3300025936 Bacteria 2901
113 Ga0207670_10095252 3300025936 Bacteria 2114
114 Ga0207704_10003511 3300025938 Bacteria 7132
115 Ga0207691_10005420 3300025940 Bacteria 12311
116 Ga0207691_10262361 3300025940 Bacteria 1489
117 Ga0207711_10185617 3300025941 Bacteria 1893
118 Ga0207689_10140895 3300025942 Bacteria 1986
119 Ga0207661_10139235 3300025944 Bacteria 2087
120 Ga0207661_10322209 3300025944 Bacteria 1389
121 Ga0207661_10406076 3300025944 Bacteria 1236
122 Ga0207667_10082113 3300025949 Bacteria 3339
123 Ga0207651_10000939 3300025960 Bacteria 12838
124 Ga0207651_10057665 3300025960 Bacteria 2680
125 Ga0207651_10096519 3300025960 Bacteria 2180
126 Ga0207668_10046023 3300025972 Bacteria 2978
127 Ga0207658_10019900 3300025986 Bacteria 4645
128 Ga0207658_10204916 3300025986 Bacteria 1649
129 Ga0207658_10335751 3300025986 Bacteria 1312
130 Ga0207677_10390266 3300026023 Bacteria 1177
131 Ga0207677_10524865 3300026023 Bacteria 1028
132 Ga0207703_10036114 3300026035 Bacteria 3931
133 Ga0207703_10268876 3300026035 Bacteria 1544
134 Ga0207639_10001400 3300026041 Bacteria 16280
135 Ga0207708_10000954 3300026075 Bacteria 21673
136 Ga0207702_10255102 3300026078 Bacteria 1649
137 Ga0207702_10426767 3300026078 Bacteria 1283
138 Ga0207702_10605910 3300026078 Bacteria 1075
139 Ga0207641_10218679 3300026088 Bacteria 1765
140 Ga0207641_10415392 3300026088 Bacteria 1294
141 Ga0207648_10036020 3300026089 Bacteria 4360
142 Ga0207648_10454275 3300026089 Bacteria 1167
143 Ga0207676_10371359 3300026095 Bacteria 1329
144 Ga0207676_10476838 3300026095 Bacteria 1181
145 Ga0207674_10209299 3300026116 Bacteria 1899
146 Ga0207675_100069891 3300026118 Bacteria 3282
147 Ga0207683_10015718 3300026121 Bacteria 6441
148 Ga0207698_10260932 3300026142 Unclassified 1591
149 Ga0207698_10842172 3300026142 Bacteria 922
150 Ga0207428_10003101 3300027907 Bacteria 16340
151 Ga0268266_10002312 3300028379 Bacteria 20668
152 Ga0268264_10054686 3300028381 Bacteria 3334
153 Ga0268264_10520761 3300028381 Bacteria 1162
154 Ga0265338_10013701 3300028800 Bacteria 9122
155 Ga0265760_10022107 3300031090 Unclassified 1842
156 Ga0265330_10000040 3300031235 Bacteria 119692
157 Ga0265332_10000158 3300031238 Bacteria 54788
158 Ga0265332_10109707 3300031238 Bacteria 1163
159 Ga0265328_10000940 3300031239 Bacteria 13405
160 Ga0265320_10000003 3300031240 Bacteria 410153
161 Ga0265320_10021494 3300031240 Bacteria 3468
162 Ga0265329_10020378 3300031242 Bacteria 2240
163 Ga0265340_10008736 3300031247 Bacteria 5463
164 Ga0265340_10150070 3300031247 Bacteria 1063
165 Ga0265339_10012556 3300031249 Bacteria 5168
166 Ga0265339_10202847 3300031249 Bacteria 977
167 Ga0265331_10000042 3300031250 Bacteria 191733
168 Ga0265316_10014828 3300031344 Bacteria 6839
169 Ga0265313_10000248 3300031595 Bacteria 58684
170 Ga0265314_10000049 3300031711 Bacteria 191749
171 Ga0265314_10017958 3300031711 Bacteria 5535
172 Ga0265342_10000956 3300031712 Bacteria 28772
173 Ga0265342_10018027 3300031712 Bacteria 4581
174 Ga0265342_10024813 3300031712 Bacteria 3779
175 Ga0316576_10108816 3300031727 Bacteria 2077
176 Ga0307518_10031441 3300031838 Bacteria 3846
177 Ga0373950_0000024 3300034818 Bacteria 186458
178 Ga0373954_0057910 3300035118 Bacteria 1825
179 Ga0373956_0020548 3300035119 Bacteria 2811
180 Ga0373957_0117398 3300035120 Bacteria 1075
181 Ga0373957_0193389 3300035120 Bacteria 846
182 Ga0373943_0042551 3300035170 Bacteria 2202
183 Ga0373955_0046466 3300035172 Bacteria 2347
184 Ga0373955_0276153 3300035172 Bacteria 1010
185 Ga0316574_0455581 3300035398 Bacteria 801
186 Ga0373933_0000914 3300035724 Bacteria 18054
187 Ga0373933_0119800 3300035724 Bacteria 1647
188 Ga0373947_0079733 3300035725 Bacteria 2024
189 Ga0373937_0011356 3300036401 Bacteria 7815
190 Ga0373937_0259568 3300036401 Bacteria 1638
191 Ga0373937_0283581 3300036401 Bacteria 1564
192 Ga0316584_0068027 3300036712 Bacteria 2669
193 Ga0316584_0565303 3300036712 Bacteria 792
194 Ga0373925_0001324 3300037068 Bacteria 21680
195 Ga0373925_0090572 3300037068 Bacteria 2338
196 Ga0373925_0209625 3300037068 Bacteria 1552
197 Ga0395905_0662294 3300037471 Bacteria 946
198 Ga0436364_0650597 3300037853 Bacteria 8251
199 Ga0436365_0224129 3300039437 Bacteria 5509
200 Ga0436363_0535956 3300039450 Bacteria 730
201 Ga0451577_0118356 3300042876 Bacteria 2373
202 Ga0453683_0004531 3300044673 Bacteria 9841
203 Ga0466966_0144145 3300044684 Bacteria 1454
204 Ga0466961_0032372 3300044693 Bacteria 3359
205 Ga0466959_0066088 3300045049 Bacteria 2623
206 Ga0451576_0074729 3300045051 Bacteria 3526
207 Ga0451576_0096729 3300045051 Bacteria 3071
208 Ga0495651_0364208 3300046462 Bacteria 952
209 Ga0495582_0220109 3300046473 Bacteria 1086
210 Ga0495664_0011358 3300046477 Bacteria 5019
211 Ga0495607_0000250 3300046501 Bacteria 57693
212 Ga0495607_0060255 3300046501 Bacteria 2161
213 Ga0495608_0001478 3300046511 Bacteria 16708
214 Ga0495618_0209557 3300046514 Bacteria 1232
215 Ga0495628_0044251 3300046516 Bacteria 3543
216 Ga0495628_0048074 3300046516 Bacteria 3382
217 Ga0495630_0049834 3300046517 Bacteria 3134
218 Ga0495634_0002761 3300046642 Bacteria 14417
219 Ga0495581_0240979 3300047315 Bacteria 1057
220 Ga0495674_0030625 3300047319 Bacteria 4891
221 Ga0495674_0954249 3300047319 Bacteria 659
222 Ga0495676_0507502 3300047321 Bacteria 791
223 Ga0496101_0044082 3300048904 Bacteria 3191
224 Ga0496108_0014755 3300048911 Bacteria 6377
225 Ga0496109_0057900 3300048912 Bacteria 3539
226 Ga0496114_0001456 3300048917 Bacteria 17976
227 Ga0496114_0006775 3300048917 Bacteria 9026
228 Ga0496115_0008196 3300048918 Bacteria 7720
229 Ga0501032_0430383 3300049569 Bacteria 846
230 Ga0501033_0148851 3300049570 Bacteria 1690
231 Ga0501034_0119987 3300049571 Bacteria 2616
232 Ga0501036_0104762 3300049572 Bacteria 2392
233 Ga0501038_0457127 3300049574 Bacteria 981
234 Ga0501042_0482341 3300049578 Bacteria 900
235 Ga0501043_0063624 3300049579 Bacteria 2897
236 Ga0501043_0110954 3300049579 Bacteria 2153
237 Ga0501046_0000418 3300049580 Bacteria 42394
238 Ga0501046_0133897 3300049580 Unclassified 1878
239 Ga0501047_0000008 3300049581 Bacteria 441758
240 Ga0501047_0003655 3300049581 Bacteria 14501
241 Ga0501048_0000516 3300049582 Bacteria 27122
242 Ga0501067_0004694 3300049583 Bacteria 7563
243 Ga0501067_0017250 3300049583 Bacteria 3990
244 Ga0501072_0000137 3300049588 Bacteria 55037
245 Ga0501073_0036304 3300049589 Bacteria 3502
246 Ga0501073_0310837 3300049589 Bacteria 1087
247 Ga0501075_0649340 3300049591 Bacteria 804
248 Ga0501080_0359460 3300049742 Bacteria 1314
249 Ga0501080_0466755 3300049742 Bacteria 1130
250 Ga0501083_0118869 3300049744 Bacteria 1734
251 Ga0501035_0001702 3300049822 Bacteria 22208
252 Ga0501044_0008553 3300049823 Bacteria 11217
253 nmdc:mga05p37_84668_c1 3300050507 Bacteria 3906
254 nmdc:mga08y16_222_c1 3300050511 Bacteria 50974
255 Ga0495601_0098649 3300053077 Bacteria 1886
256 Ga0501082_0382768 3300060353 Bacteria 1228
257 Ga0466962_0050365 3300061719 Bacteria 1991
258 2919085748 2919085039 Bacteria 4532964
259 2920108169 2920107658 Bacteria 10042636
260 2935396395 2935390628 Bacteria 7043367
261 3006487809 3006486233 Bacteria 8157040
262 Ga0070689_100000001
263 rootH2_10207027
264 rootH1_10201074
265 rootH1_10234209
266 rootH1_10308355
267 Ga0070658_10000163
268 Ga0070658_10284891
269 Ga0070683_100258661
270 Ga0070683_100359042
271 Ga0070690_100007575
272 Ga0070690_100010327
273 Ga0070670_100129837
274 Ga0068869_100396909
275 Ga0070680_100014678
276 Ga0070682_100006062
277 Ga0068868_100346064
278 Ga0070689_100002701
279 Ga0070689_100205357
280 Ga0070691_10119029
281 Ga0070668_100068667
282 Ga0070669_100141629
283 Ga0070675_100494583
284 Ga0070674_100026811
285 Ga0070673_100001297
286 Ga0070673_100072682
287 Ga0070673_100087190
288 Ga0070688_100014835
289 Ga0070659_100263120
290 Ga0070667_100083754
291 Ga0070667_100347015
292 Ga0070701_10121417
293 Ga0070705_100452351
294 Ga0070708_100066139
295 Ga0070678_100023154
296 Ga0070678_100821215
297 Ga0070662_100522702
298 Ga0070681_10443756
299 Ga0068867_100030089
300 Ga0070685_10024701
301 Ga0070698_100224429
302 Ga0070698_100457580
303 Ga0070699_100092696
304 Ga0070679_100000382
305 Ga0070679_100005475
306 Ga0070684_100002036
307 Ga0068853_100008682
308 Ga0070672_100072006
309 Ga0070672_100144108
310 Ga0070696_100056784
311 Ga0070665_100006032
312 Ga0068857_100101564
313 Ga0068857_100408577
314 Ga0068856_100194560
315 Ga0068856_100267758
316 Ga0068856_100533390
317 Ga0070702_100119654
318 Ga0068852_100276316
319 Ga0068864_100518567
320 Ga0068866_10020569
321 Ga0068861_100025995
322 Ga0068863_100128307
323 Ga0068863_100210637
324 Ga0068863_100297626
325 Ga0068858_100062023
326 Ga0068858_100314759
327 Ga0068860_100035496
328 Ga0068862_100080507
329 Ga0068865_100131959
330 Ga0068865_100339893
331 Ga0105240_10001211
332 Ga0114129_10091822
333 Ga0105248_10208610
334 Ga0105237_10000006
335 Ga0105237_10075161
336 Ga0105238_10024935
337 Ga0105238_10248684
338 Ga0105239_10154720
339 Ga0157370_10005948
340 Ga0157369_10008216
341 Ga0157378_10172907
342 Ga0157378_10507381
343 Ga0163163_11555143
344 Ga0157377_10240196
345 Ga0157379_10080228
346 Ga0182005_1000054
347 Ga0197907_10583741
348 Ga0206350_10840806
349 Ga0206354_10101505
350 Ga0206354_10887736
351 Ga0206353_10725075
352 Ga0213875_10004007
353 Ga0224712_10006322
354 Ga0207642_10004765
355 Ga0207645_10001957
356 Ga0207705_10051626
357 Ga0207707_10236495
358 Ga0207695_10002465
359 Ga0207671_10000070
360 Ga0207662_10225434
361 Ga0207652_10001790
362 Ga0207652_10002710
363 Ga0207652_10045504
364 Ga0207681_10002933
365 Ga0207694_10010851
366 Ga0207694_10208389
367 Ga0207650_10048691
368 Ga0207650_10082216
369 Ga0207644_10658701
370 Ga0207690_10353308
371 Ga0207670_10000014
372 Ga0207670_10019191
373 Ga0207670_10045834
374 Ga0207670_10095252
375 Ga0207704_10003511
376 Ga0207691_10005420
377 Ga0207691_10262361
378 Ga0207711_10185617
379 Ga0207689_10140895
380 Ga0207661_10139235
381 Ga0207661_10322209
382 Ga0207661_10406076
383 Ga0207667_10082113
384 Ga0207651_10000939
385 Ga0207651_10057665
386 Ga0207651_10096519
387 Ga0207668_10046023
388 Ga0207658_10019900
389 Ga0207658_10204916
390 Ga0207658_10335751
391 Ga0207677_10390266
392 Ga0207677_10524865
393 Ga0207703_10036114
394 Ga0207703_10268876
395 Ga0207639_10001400
396 Ga0207708_10000954
397 Ga0207702_10255102
398 Ga0207702_10426767
399 Ga0207702_10605910
400 Ga0207641_10218679
401 Ga0207641_10415392
402 Ga0207648_10036020
403 Ga0207648_10454275
404 Ga0207676_10371359
405 Ga0207676_10476838
406 Ga0207674_10209299
407 Ga0207675_100069891
408 Ga0207683_10015718
409 Ga0207698_10260932
410 Ga0207698_10842172
411 Ga0207428_10003101
412 Ga0268266_10002312
413 Ga0268264_10054686
414 Ga0268264_10520761
415 Ga0265338_10013701
416 Ga0265760_10022107
417 Ga0265330_10000040
418 Ga0265332_10000158
419 Ga0265332_10109707
420 Ga0265328_10000940
421 Ga0265320_10000003
422 Ga0265320_10021494
423 Ga0265329_10020378
424 Ga0265340_10008736
425 Ga0265340_10150070
426 Ga0265339_10012556
427 Ga0265339_10202847
428 Ga0265331_10000042
429 Ga0265316_10014828
430 Ga0265313_10000248
431 Ga0265314_10000049
432 Ga0265314_10017958
433 Ga0265342_10000956
434 Ga0265342_10018027
435 Ga0265342_10024813
436 Ga0316576_10108816
437 Ga0307518_10031441
438 Ga0373950_0000024
439 Ga0373954_0057910
440 Ga0373956_0020548
441 Ga0373957_0117398
442 Ga0373957_0193389
443 Ga0373943_0042551
444 Ga0373955_0046466
445 Ga0373955_0276153
446 Ga0316574_0455581
447 Ga0373933_0000914
448 Ga0373933_0119800
449 Ga0373947_0079733
450 Ga0373937_0011356
451 Ga0373937_0259568
452 Ga0373937_0283581
453 Ga0316584_0068027
454 Ga0316584_0565303
455 Ga0373925_0001324
456 Ga0373925_0090572
457 Ga0373925_0209625
458 Ga0395905_0662294
459 Ga0436364_0650597
460 Ga0436365_0224129
461 Ga0436363_0535956
462 Ga0451577_0118356
463 Ga0453683_0004531
464 Ga0466966_0144145
465 Ga0466961_0032372
466 Ga0466959_0066088
467 Ga0451576_0074729
468 Ga0451576_0096729
469 Ga0495651_0364208
470 Ga0495582_0220109
471 Ga0495664_0011358
472 Ga0495607_0000250
473 Ga0495607_0060255
474 Ga0495608_0001478
475 Ga0495618_0209557
476 Ga0495628_0044251
477 Ga0495628_0048074
478 Ga0495630_0049834
479 Ga0495634_0002761
480 Ga0495581_0240979
481 Ga0495674_0030625
482 Ga0495674_0954249
483 Ga0495676_0507502
484 Ga0496101_0044082
485 Ga0496108_0014755
486 Ga0496109_0057900
487 Ga0496114_0001456
488 Ga0496114_0006775
489 Ga0496115_0008196
490 Ga0501032_0430383
491 Ga0501033_0148851
492 Ga0501034_0119987
493 Ga0501036_0104762
494 Ga0501038_0457127
495 Ga0501042_0482341
496 Ga0501043_0063624
497 Ga0501043_0110954
498 Ga0501046_0000418
499 Ga0501046_0133897
500 Ga0501047_0000008
501 Ga0501047_0003655
502 Ga0501048_0000516
503 Ga0501067_0004694
504 Ga0501067_0017250
505 Ga0501072_0000137
506 Ga0501073_0036304
507 Ga0501073_0310837
508 Ga0501075_0649340
509 Ga0501080_0359460
510 Ga0501080_0466755
511 Ga0501083_0118869
512 Ga0501035_0001702
513 Ga0501044_0008553
514 nmdc:mga05p37_84668_c1
515 nmdc:mga08y16_222_c1
516 Ga0495601_0098649
517 Ga0501082_0382768
518 Ga0466962_0050365
519 2919085748
520 2920108169
521 2935396395
522 3006487809

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02224

Cytidylate_kin

Cytidylate kinase

48

262

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
1kdt-assembly1.cif.gz_A cytidine monophosphate kinase from e.coli in complex with 2',3'-dideoxy-cytidine monophosphate 0.9209 20 233
3r20-assembly1.cif.gz_A crystal structure of cytidylate kinase from mycobacterium smegmatis 0.9064 20 228
2feo-assembly1.cif.gz_A mutant r188m of the cytidine monophosphate kinase from e. coli complexed with dcmp 0.8978 20 231
4die-assembly6.cif.gz_D crystal structure of a cytidylate kinase cmk from mycobacterium abscessus bound to cytidine-5'-monophosphate 0.8907 20 231
3r8c-assembly1.cif.gz_A crystal structure of cytidylate kinase (cmk) from mycobacterium abscessus 0.8845 20 231
ID Description Score Start End Superfamily
4dieB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8802 20 231 3.40.50.300
2h92C00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8664 20 231 3.40.50.300
4dieB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8639 20 231 3.40.50.300
2h92C00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8481 20 231 3.40.50.300
2femA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8351 20 233 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A2H0LC12-F1-model_v4 Cytidylate kinase (CK) (EC 2.7.4.25) (Cytidine monophosphate kinase) (CMP kinase) 0.9651 16 235 GO:0005524
GO:0005829
GO:0006220
GO:0015949
GO:0036430
GO:0036431
AF-U4KNR7-F1-model_v4 Cytidylate kinase (CK) (EC 2.7.4.25) (Cytidine monophosphate kinase) (CMP kinase) 0.9638 20 232 GO:0003729
GO:0003735
GO:0005524
GO:0005737
GO:0005840
GO:0006220
GO:0006412
GO:0016887
GO:0036430
GO:0036431
GO:1990904
AF-A0A660WTD9-F1-model_v4 (d)CMP kinase (EC 2.7.4.25) 0.9608 20 168 GO:0005524
GO:0036430
GO:0036431
AF-A0A7C3YJB2-F1-model_v4 Cytidylate kinase (CK) (EC 2.7.4.25) (Cytidine monophosphate kinase) (CMP kinase) 0.9601 20 233 GO:0004127
GO:0005524
GO:0005829
GO:0006220
GO:0015949
AF-A0A1F7RZQ0-F1-model_v4 Cytidylate kinase (CK) (EC 2.7.4.25) (Cytidine monophosphate kinase) (CMP kinase) 0.958 20 235 GO:0005524
GO:0005829
GO:0006220
GO:0015949
GO:0036430
GO:0036431

Map