F370195

General Info

Members Datasets Scaffolds Average Seq Length
261 167 255 291

Family's Representative Sequence

Representative Sequence 3300005530|Ga0070679_100207769|Ga0070679_1002077693
Length 319
Sequence MPVDAAMSAAGPAHGGNSAPSVRSAAVPVRKPGVAVVIGSGSVKCAAALGLVNVLDRAGIAIEMLVGCSAGCIYATLIASGRSTAEAAAMTRVLWTSTIAGKHDRRALLRTVFPRLFGFNARYGLRDDRIVMRRLNDAFGDLAIESTPTPLHLTATDFATGHQAVFSSGRAVDAIRASIAVPFLFSPWPIGERLYLDGYMSDPLPVGVAIREGANVIVAMGFESPYQESISSAGRFAFQVSAILSNNLLKSQFAFHGLAHHAEIIPIIPQFRERIRLFDTDKIPYIIEEGERAAEAQLPYLMQLLGAQEGGTQPTVAQL

Samples

Sample ID Description Type Environment
1 2881101125 Ramlibacter rhizophilus CCTCC AB2015357 Isolate Rhizosphere
2 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
3 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
4 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
12 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
13 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
14 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
15 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
16 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
17 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
18 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
19 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
20 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
21 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
22 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
23 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
24 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
25 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
26 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
27 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
28 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
29 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
30 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
31 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
32 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
33 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
34 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
35 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
36 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
37 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
38 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
39 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
40 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
41 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
42 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
44 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
45 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
46 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
47 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
48 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
49 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
50 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
51 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
52 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
54 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
55 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
56 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
57 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
58 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
59 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
60 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
61 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
62 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
63 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
64 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300027360 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 PM (SPAdes) (version 2) Metagenome Rhizosphere
95 3300027462 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co PM (SPAdes) (version 2) Metagenome Rhizosphere
96 3300027471 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 AM (SPAdes) (version 2) Metagenome Rhizosphere
97 3300027526 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes) (version 2) Metagenome Rhizosphere
98 3300027543 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes) (version 2) Metagenome Rhizosphere
99 3300027617 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S AM (SPAdes) (version 2) Metagenome Rhizosphere
100 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
101 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
102 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
103 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
104 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
107 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
108 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
109 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
110 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
111 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
112 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
113 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
114 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
115 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
116 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
117 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
118 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
119 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
120 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
121 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
122 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
123 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
124 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
125 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
126 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
127 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
128 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
129 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
130 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
131 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
132 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
133 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
134 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
135 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
136 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
137 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
138 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
139 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
140 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
141 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
142 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
143 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
144 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
145 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
146 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
147 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
148 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
149 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
150 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
151 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
152 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
153 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
154 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
155 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
156 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
157 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
158 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
159 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
160 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
161 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
162 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
163 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
164 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
165 3300053145 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 endosphere Metagenome Endosphere
166 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
167 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.62
Metatranscriptomes 0
Isolates 0.38

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.77
Nodule 0
Rhizoplane 3.07
Rhizosphere 95.02
Stem 0
Stem Tuber 0
Unclassified 1.15

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070676_10122777 3300005328 Bacteria 1632
2 Ga0070670_100017070 3300005331 Bacteria 6228
3 Ga0070677_10001293 3300005333 Bacteria 8022
4 Ga0068869_100000007 3300005334 Bacteria 78820
5 Ga0068869_100066097 3300005334 Bacteria 2664
6 Ga0070666_10114109 3300005335 Bacteria 1870
7 Ga0070660_100104164 3300005339 Bacteria 2250
8 Ga0070668_100005031 3300005347 Bacteria 9790
9 Ga0070668_100038664 3300005347 Bacteria 3648
10 Ga0070668_100045716 3300005347 Bacteria 3359
11 Ga0070669_100009431 3300005353 Bacteria 6950
12 Ga0070669_100014860 3300005353 Bacteria 5547
13 Ga0070675_100006243 3300005354 Bacteria 9144
14 Ga0070674_100009100 3300005356 Bacteria 5941
15 Ga0070659_100091629 3300005366 Bacteria 2436
16 Ga0070667_100001939 3300005367 Bacteria 18351
17 Ga0070667_100210820 3300005367 Bacteria 1726
18 Ga0070703_10083434 3300005406 Bacteria 1093
19 Ga0070705_100195484 3300005440 Bacteria 1382
20 Ga0070700_100095671 3300005441 Bacteria 1947
21 Ga0070708_100055190 3300005445 Bacteria 3532
22 Ga0070708_100144154 3300005445 Bacteria 2211
23 Ga0070708_100233636 3300005445 Bacteria 1725
24 Ga0070663_100006436 3300005455 Bacteria 7062
25 Ga0070678_100086474 3300005456 Bacteria 2392
26 Ga0070678_100175077 3300005456 Bacteria 1751
27 Ga0070662_100129700 3300005457 Bacteria 1942
28 Ga0068867_100005604 3300005459 Bacteria 8896
29 Ga0070698_100024581 3300005471 Bacteria 6285
30 Ga0070698_100055122 3300005471 Bacteria 4034
31 Ga0070698_100246494 3300005471 Bacteria 1719
32 Ga0070699_100003335 3300005518 Bacteria 14209
33 Ga0070679_100207769 3300005530 Bacteria 1922
34 Ga0070684_100019993 3300005535 Bacteria 5550
35 Ga0070697_100438555 3300005536 Bacteria 1136
36 Ga0070672_100051842 3300005543 Bacteria 3202
37 Ga0070695_100146456 3300005545 Bacteria 1643
38 Ga0070696_100330369 3300005546 Bacteria 1176
39 Ga0068855_100108909 3300005563 Bacteria 3182
40 Ga0068855_100118756 3300005563 Bacteria 3028
41 Ga0068857_100000676 3300005577 Bacteria 25307
42 Ga0068854_100120868 3300005578 Bacteria 1988
43 Ga0068852_100193891 3300005616 Bacteria 1919
44 Ga0068852_100324090 3300005616 Bacteria 1497
45 Ga0068859_100190003 3300005617 Bacteria 2138
46 Ga0068864_100002644 3300005618 Bacteria 14791
47 Ga0068861_100020104 3300005719 Bacteria 4776
48 Ga0068861_100020623 3300005719 Bacteria 4724
49 Ga0068870_10004850 3300005840 Bacteria 5818
50 Ga0068858_100023342 3300005842 Bacteria 5763
51 Ga0068858_100040920 3300005842 Bacteria 4299
52 Ga0068860_100005878 3300005843 Bacteria 12351
53 Ga0068860_100042198 3300005843 Bacteria 4358
54 Ga0068862_100064376 3300005844 Bacteria 3156
55 Ga0081539_10010811 3300005985 Bacteria 7342
56 Ga0097621_100226778 3300006237 Bacteria 1630
57 Ga0075428_100088513 3300006844 Bacteria 3377
58 Ga0075428_100385532 3300006844 Unclassified 1502
59 Ga0075433_10012635 3300006852 Bacteria 6831
60 Ga0075434_100013489 3300006871 Bacteria 7780
61 Ga0068865_100080509 3300006881 Bacteria 2336
62 Ga0097620_100190005 3300006931 Bacteria 2138
63 Ga0075435_100173079 3300007076 Bacteria 1822
64 Ga0105240_10810028 3300009093 Unclassified 1014
65 Ga0105245_10282211 3300009098 Bacteria 1623
66 Ga0105247_10017047 3300009101 Bacteria 4359
67 Ga0114129_10001479 3300009147 Bacteria 31834
68 Ga0114129_10002714 3300009147 Bacteria 24652
69 Ga0105248_10001664 3300009177 Bacteria 24713
70 Ga0105249_10002752 3300009553 Bacteria 15201
71 Ga0105249_10057419 3300009553 Bacteria 3565
72 Ga0105249_10069254 3300009553 Bacteria 3256
73 Ga0105239_10481895 3300010375 Bacteria 1409
74 Ga0105246_10450434 3300011119 Bacteria 1081
75 Ga0157370_10000893 3300013104 Bacteria 37892
76 Ga0157378_10072755 3300013297 Bacteria 3089
77 Ga0163162_10000797 3300013306 Bacteria 29330
78 Ga0163162_10124661 3300013306 Bacteria 2681
79 Ga0163162_10331844 3300013306 Bacteria 1653
80 Ga0157375_10002623 3300013308 Bacteria 15585
81 Ga0157375_10008817 3300013308 Bacteria 8832
82 Ga0163163_10001377 3300014325 Bacteria 20520
83 Ga0157377_10074763 3300014745 Bacteria 1966
84 Ga0157379_10000142 3300014968 Bacteria 51727
85 Ga0157379_10010372 3300014968 Bacteria 8118
86 Ga0207697_10018789 3300025315 Bacteria 2833
87 Ga0207682_10000959 3300025893 Bacteria 13354
88 Ga0207680_10000912 3300025903 Bacteria 13959
89 Ga0207680_10286812 3300025903 Bacteria 1145
90 Ga0207647_10036508 3300025904 Bacteria 3122
91 Ga0207643_10005381 3300025908 Bacteria 6853
92 Ga0207643_10007243 3300025908 Bacteria 5955
93 Ga0207684_10011686 3300025910 Bacteria 7661
94 Ga0207684_10055740 3300025910 Bacteria 3353
95 Ga0207693_10172041 3300025915 Bacteria 1705
96 Ga0207663_10389022 3300025916 Bacteria 1064
97 Ga0207657_10079478 3300025919 Bacteria 2759
98 Ga0207681_10010197 3300025923 Bacteria 5754
99 Ga0207681_10084233 3300025923 Bacteria 2253
100 Ga0207650_10128680 3300025925 Bacteria 1979
101 Ga0207659_10384946 3300025926 Bacteria 1170
102 Ga0207690_10506411 3300025932 Bacteria 977
103 Ga0207706_10004966 3300025933 Bacteria 12433
104 Ga0207669_10078548 3300025937 Bacteria 2103
105 Ga0207691_10013316 3300025940 Bacteria 7878
106 Ga0207691_10014244 3300025940 Bacteria 7586
107 Ga0207711_10080692 3300025941 Bacteria 2842
108 Ga0207711_10336209 3300025941 Bacteria 1397
109 Ga0207689_10000142 3300025942 Bacteria 61457
110 Ga0207689_10008464 3300025942 Bacteria 8960
111 Ga0207689_10014212 3300025942 Bacteria 6773
112 Ga0207667_10075613 3300025949 Bacteria 3496
113 Ga0207712_10056633 3300025961 Bacteria 2762
114 Ga0207658_10306641 3300025986 Bacteria 1370
115 Ga0207703_10000195 3300026035 Bacteria 70480
116 Ga0207703_10299211 3300026035 Bacteria 1467
117 Ga0207678_10080980 3300026067 Bacteria 2779
118 Ga0207678_10138617 3300026067 Bacteria 2076
119 Ga0207641_10061224 3300026088 Bacteria 3210
120 Ga0207648_10001385 3300026089 Bacteria 26708
121 Ga0207648_10005172 3300026089 Bacteria 13215
122 Ga0207676_10381982 3300026095 Bacteria 1311
123 Ga0207676_10568184 3300026095 Bacteria 1085
124 Ga0207674_10006651 3300026116 Bacteria 13579
125 Ga0207674_10328857 3300026116 Unclassified 1478
126 Ga0207675_100001551 3300026118 Bacteria 22995
127 Ga0207675_100013274 3300026118 Bacteria 7690
128 Ga0207683_10050177 3300026121 Bacteria 3654
129 Ga0207698_10370645 3300026142 Bacteria 1359
130 Ga0209969_1001760 3300027360 Bacteria 2988
131 Ga0210000_1005423 3300027462 Bacteria 1851
132 Ga0209995_1002586 3300027471 Bacteria 2865
133 Ga0209968_1001778 3300027526 Bacteria 3271
134 Ga0209999_1003810 3300027543 Bacteria 2708
135 Ga0210002_1007214 3300027617 Bacteria 1682
136 Ga0209983_1000173 3300027665 Bacteria 12241
137 Ga0209971_1000273 3300027682 Bacteria 14582
138 Ga0209998_10001750 3300027717 Bacteria 5170
139 Ga0209974_10000244 3300027876 Bacteria 17535
140 Ga0268265_10002425 3300028380 Bacteria 14080
141 Ga0268265_10164631 3300028380 Bacteria 1888
142 Ga0268264_10000606 3300028381 Bacteria 43164
143 Ga0268264_10045642 3300028381 Bacteria 3638
144 Ga0307513_10069762 3300031456 Bacteria 3677
145 Ga0307408_100007961 3300031548 Bacteria 7008
146 Ga0307408_100019267 3300031548 Bacteria 4593
147 Ga0307408_100153505 3300031548 Bacteria 1820
148 Ga0316576_10004213 3300031727 Bacteria 8589
149 Ga0316576_10014652 3300031727 Bacteria 5240
150 Ga0307405_10015345 3300031731 Bacteria 4147
151 Ga0307405_10041903 3300031731 Bacteria 2783
152 Ga0307413_10000470 3300031824 Bacteria 13124
153 Ga0307413_10011057 3300031824 Bacteria 4415
154 Ga0307413_10044643 3300031824 Unclassified 2621
155 Ga0307413_10057289 3300031824 Unclassified 2382
156 Ga0307413_10064848 3300031824 Bacteria 2271
157 Ga0307413_10176863 3300031824 Unclassified 1517
158 Ga0307410_10013944 3300031852 Bacteria 4709
159 Ga0307410_10023453 3300031852 Bacteria 3835
160 Ga0307410_10073921 3300031852 Bacteria 2372
161 Ga0307406_10006684 3300031901 Bacteria 6376
162 Ga0307406_10127760 3300031901 Unclassified 1779
163 Ga0307407_10007459 3300031903 Bacteria 4956
164 Ga0307407_10019908 3300031903 Bacteria 3425
165 Ga0307407_10060848 3300031903 Bacteria 2205
166 Ga0307412_10010444 3300031911 Bacteria 5347
167 Ga0307412_10019810 3300031911 Bacteria 4082
168 Ga0307412_10062779 3300031911 Bacteria 2503
169 Ga0307412_10134839 3300031911 Bacteria 1799
170 Ga0307412_10225325 3300031911 Bacteria 1440
171 Ga0307412_10318684 3300031911 Bacteria 1236
172 Ga0307409_100009849 3300031995 Bacteria 5897
173 Ga0307409_100053858 3300031995 Bacteria 3094
174 Ga0307409_100207655 3300031995 Unclassified 1757
175 Ga0307416_100007667 3300032002 Bacteria 6888
176 Ga0307416_100018665 3300032002 Bacteria 4894
177 Ga0307416_100076757 3300032002 Unclassified 2802
178 Ga0307416_100272996 3300032002 Bacteria 1661
179 Ga0307416_100296817 3300032002 Unclassified 1603
180 Ga0307416_100436781 3300032002 Bacteria 1358
181 Ga0307414_10006735 3300032004 Bacteria 6426
182 Ga0307414_10045916 3300032004 Bacteria 2994
183 Ga0307414_10055041 3300032004 Bacteria 2784
184 Ga0307414_10063713 3300032004 Bacteria 2621
185 Ga0307414_10522015 3300032004 Bacteria 1054
186 Ga0307411_10038236 3300032005 Bacteria 3024
187 Ga0307411_10154152 3300032005 Bacteria 1711
188 Ga0307411_10270724 3300032005 Bacteria 1346
189 Ga0307415_100016122 3300032126 Bacteria 4444
190 Ga0307415_100052083 3300032126 Bacteria 2781
191 Ga0307415_100437901 3300032126 Unclassified 1126
192 Ga0373945_0007157 3300035116 Bacteria 3612
193 Ga0373957_0095630 3300035120 Unclassified 1185
194 Ga0373943_0061715 3300035170 Bacteria 1875
195 Ga0373946_0013847 3300035171 Bacteria 3036
196 Ga0373955_0087525 3300035172 Bacteria 1771
197 Ga0373924_0008549 3300035410 Bacteria 3726
198 Ga0373935_0038440 3300035692 Bacteria 2997
199 Ga0373947_0041802 3300035725 Bacteria 2735
200 Ga0373937_0017225 3300036401 Bacteria 6432
201 Ga0373937_0048433 3300036401 Bacteria 3891
202 Ga0373925_0025796 3300037068 Bacteria 4297
203 Ga0395900_0238376 3300037418 Bacteria 1826
204 Ga0395905_0014593 3300037471 Bacteria 7494
205 Ga0451577_0015008 3300042876 Bacteria 7208
206 Ga0451577_0119967 3300042876 Bacteria 2355
207 Ga0451577_0225804 3300042876 Unclassified 1693
208 Ga0453683_0377880 3300044673 Bacteria 912
209 Ga0453684_0246444 3300044712 Bacteria 2054
210 Ga0453684_0249776 3300044712 Bacteria 2037
211 Ga0453684_0553120 3300044712 Bacteria 1267
212 Ga0451576_0048812 3300045051 Bacteria 4444
213 Ga0495651_0175356 3300046462 Unclassified 1523
214 Ga0495580_0188158 3300046472 Bacteria 1424
215 Ga0495639_0064650 3300046475 Bacteria 1682
216 Ga0495654_0002040 3300046530 Bacteria 13248
217 Ga0495659_0047697 3300046664 Bacteria 1550
218 Ga0495647_0033025 3300046681 Bacteria 1932
219 Ga0495647_0069755 3300046681 Unclassified 1405
220 Ga0495658_0025681 3300046683 Bacteria 3151
221 Ga0495581_0182701 3300047315 Bacteria 1227
222 Ga0495684_0245959 3300047471 Bacteria 1303
223 Ga0495602_0044901 3300048088 Bacteria 4004
224 Ga0496102_0011410 3300048905 Bacteria 7659
225 Ga0496102_0141951 3300048905 Bacteria 2252
226 Ga0496102_0203111 3300048905 Bacteria 1868
227 Ga0496103_0058552 3300048906 Bacteria 2394
228 Ga0496107_0013079 3300048910 Bacteria 5798
229 Ga0496107_0232437 3300048910 Bacteria 1372
230 Ga0496109_0253800 3300048912 Bacteria 1656
231 Ga0496113_0195140 3300048916 Bacteria 1608
232 Ga0496125_0028489 3300048928 Bacteria 5043
233 Ga0496126_0071662 3300048929 Bacteria 3084
234 Ga0501041_0100105 3300049577 Bacteria 1794
235 Ga0501074_0099043 3300049590 Bacteria 2087
236 Ga0501075_0219257 3300049591 Bacteria 1451
237 Ga0501081_0011262 3300049743 Bacteria 5850
238 Ga0501081_0399092 3300049743 Unclassified 1018
239 Ga0501045_0043008 3300049824 Bacteria 3289
240 nmdc:mga05p37_37968_c1 3300050507 Bacteria 5907
241 nmdc:mga05p37_4872_c1 3300050507 Bacteria 15708
242 nmdc:mga05p37_48944_c1 3300050507 Bacteria 5198
243 nmdc:mga09592_78434_c1 3300050508 Unclassified 2811
244 nmdc:mga06r32_379510_c1 3300050510 Bacteria 1396
245 nmdc:mga0n895_13832_c1 3300050512 Bacteria 7302
246 nmdc:mga0rr50_112382_c1 3300050513 Bacteria 2157
247 nmdc:mga0a205_3861_c1 3300050515 Bacteria 13426
248 Ga0500644_0070082 3300053088 Bacteria 1261
249 Ga0500586_017457 3300053145 Bacteria 2196
250 Ga0501084_0265621 3300054114 Unclassified 1449
251 Ga0501084_0311335 3300054114 Bacteria 1330
252 Ga0501082_0032266 3300060353 Bacteria 4517
253 Ga0501082_0127235 3300060353 Unclassified 2210
254 Ga0501082_0133059 3300060353 Bacteria 2158
255 Ga0501082_0477051 3300060353 Unclassified 1090

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300010375 Ga0105239_10481895 Ga0105239_104818952 259
2 3300032002 Ga0307416_100436781 Ga0307416_1004367812 262
3 3300046681 Ga0495647_0069755 Ga0495647_0069755_15_830 268
4 3300049591 Ga0501075_0219257 Ga0501075_0219257_219_1025 268
5 3300049824 Ga0501045_0043008 Ga0501045_0043008_601_1407 268
6 3300060353 Ga0501082_0032266 Ga0501082_0032266_853_1659 268
7 3300025903 Ga0207680_10286812 Ga0207680_102868122 271
8 3300027462 Ga0210000_1005423 Ga0210000_10054232 274
9 3300027617 Ga0210002_1007214 Ga0210002_10072143 274
10 3300044673 Ga0453683_0377880 Ga0453683_0377880_48_875 275
11 3300005985 Ga0081539_10010811 Ga0081539_100108112 276
12 3300060353 Ga0501082_0133059 Ga0501082_0133059_74_913 276
13 3300031852 Ga0307410_10073921 Ga0307410_100739211 277
14 3300031911 Ga0307412_10062779 Ga0307412_100627793 277
15 3300054114 Ga0501084_0265621 Ga0501084_0265621_546_1388 277
16 3300060353 Ga0501082_0127235 Ga0501082_0127235_482_1324 277
17 3300005471 Ga0070698_100246494 Ga0070698_1002464942 278
18 3300005518 Ga0070699_100003335 Ga0070699_1000033356 278
19 3300006844 Ga0075428_100385532 Ga0075428_1003855322 278
20 3300031824 Ga0307413_10176863 Ga0307413_101768632 278
21 3300031903 Ga0307407_10060848 Ga0307407_100608482 278
22 3300031911 Ga0307412_10318684 Ga0307412_103186842 278
23 3300032002 Ga0307416_100076757 Ga0307416_1000767574 278
24 3300042876 Ga0451577_0119967 Ga0451577_0119967_1105_1950 278
25 3300044712 Ga0453684_0249776 Ga0453684_0249776_45_890 278
26 3300050507 nmdc:mga05p37_48944_c1 nmdc:mga05p37_48944_c1_2856_3701 278
27 3300050508 nmdc:mga09592_78434_c1 nmdc:mga09592_78434_c1_671_1516 278
28 3300054114 Ga0501084_0311335 Ga0501084_0311335_424_1269 278
29 3300060353 Ga0501082_0477051 Ga0501082_0477051_195_1040 278
30 3300049743 Ga0501081_0399092 Ga0501081_0399092_64_912 279
31 3300013297 Ga0157378_10072755 Ga0157378_100727555 281
32 3300005445 Ga0070708_100055190 Ga0070708_1000551903 282
33 3300005471 Ga0070698_100055122 Ga0070698_1000551222 282
34 3300005546 Ga0070696_100330369 Ga0070696_1003303692 282
35 3300009093 Ga0105240_10810028 Ga0105240_108100281 282
36 3300035116 Ga0373945_0007157 Ga0373945_0007157_1825_2682 282
37 3300035170 Ga0373943_0061715 Ga0373943_0061715_682_1539 282
38 3300035171 Ga0373946_0013847 Ga0373946_0013847_656_1513 282
39 3300035172 Ga0373955_0087525 Ga0373955_0087525_756_1613 282
40 3300035410 Ga0373924_0008549 Ga0373924_0008549_2783_3640 282
41 3300035692 Ga0373935_0038440 Ga0373935_0038440_1734_2591 282
42 3300035725 Ga0373947_0041802 Ga0373947_0041802_68_925 282
43 3300036401 Ga0373937_0048433 Ga0373937_0048433_103_975 282
44 3300037068 Ga0373925_0025796 Ga0373925_0025796_2626_3483 282
45 3300046472 Ga0495580_0188158 Ga0495580_0188158_202_1071 282
46 3300046664 Ga0495659_0047697 Ga0495659_0047697_177_1046 282
47 3300047315 Ga0495581_0182701 Ga0495581_0182701_115_972 282
48 3300048088 Ga0495602_0044901 Ga0495602_0044901_1499_2371 282
49 3300048905 Ga0496102_0203111 Ga0496102_0203111_301_1170 282
50 iso_pu_bacteria 2881101125 2881105413 282
51 3300005334 Ga0068869_100066097 Ga0068869_1000660973 283
52 3300005353 Ga0070669_100014860 Ga0070669_1000148605 283
53 3300005445 Ga0070708_100233636 Ga0070708_1002336362 283
54 3300005455 Ga0070663_100006436 Ga0070663_1000064364 283
55 3300005471 Ga0070698_100024581 Ga0070698_1000245815 283
56 3300005536 Ga0070697_100438555 Ga0070697_1004385551 283
57 3300005543 Ga0070672_100051842 Ga0070672_1000518423 283
58 3300005545 Ga0070695_100146456 Ga0070695_1001464563 283
59 3300005578 Ga0068854_100120868 Ga0068854_1001208682 283
60 3300005617 Ga0068859_100190003 Ga0068859_1001900032 283
61 3300005842 Ga0068858_100040920 Ga0068858_1000409206 283
62 3300005843 Ga0068860_100042198 Ga0068860_1000421982 283
63 3300005844 Ga0068862_100064376 Ga0068862_1000643762 283
64 3300006871 Ga0075434_100013489 Ga0075434_1000134899 283
65 3300006931 Ga0097620_100190005 Ga0097620_1001900052 283
66 3300007076 Ga0075435_100173079 Ga0075435_1001730792 283
67 3300009147 Ga0114129_10001479 Ga0114129_100014796 283
68 3300009553 Ga0105249_10002752 Ga0105249_100027529 283
69 3300013306 Ga0163162_10000797 Ga0163162_1000079723 283
70 3300014968 Ga0157379_10010372 Ga0157379_100103725 283
71 3300025910 Ga0207684_10011686 Ga0207684_100116867 283
72 3300025910 Ga0207684_10055740 Ga0207684_100557402 283
73 3300025923 Ga0207681_10084233 Ga0207681_100842333 283
74 3300025932 Ga0207690_10506411 Ga0207690_105064111 283
75 3300025940 Ga0207691_10014244 Ga0207691_100142443 283
76 3300025942 Ga0207689_10008464 Ga0207689_100084648 283
77 3300025949 Ga0207667_10075613 Ga0207667_100756132 283
78 3300026035 Ga0207703_10299211 Ga0207703_102992111 283
79 3300026067 Ga0207678_10138617 Ga0207678_101386172 283
80 3300026088 Ga0207641_10061224 Ga0207641_100612245 283
81 3300028381 Ga0268264_10045642 Ga0268264_100456425 283
82 3300042876 Ga0451577_0015008 Ga0451577_0015008_1939_2805 283
83 3300042876 Ga0451577_0225804 Ga0451577_0225804_177_1046 283
84 3300044712 Ga0453684_0246444 Ga0453684_0246444_233_1099 283
85 3300045051 Ga0451576_0048812 Ga0451576_0048812_62_928 283
86 3300048905 Ga0496102_0141951 Ga0496102_0141951_247_1113 283
87 3300048910 Ga0496107_0013079 Ga0496107_0013079_1074_1940 283
88 3300050507 nmdc:mga05p37_37968_c1 nmdc:mga05p37_37968_c1_3519_4391 283
89 3300050512 nmdc:mga0n895_13832_c1 nmdc:mga0n895_13832_c1_5316_6188 283
90 3300050513 nmdc:mga0rr50_112382_c1 nmdc:mga0rr50_112382_c1_883_1755 283
91 3300006237 Ga0097621_100226778 Ga0097621_1002267783 284
92 3300009098 Ga0105245_10282211 Ga0105245_102822112 284
93 3300025941 Ga0207711_10336209 Ga0207711_103362092 284
94 3300031548 Ga0307408_100007961 Ga0307408_1000079614 284
95 3300031548 Ga0307408_100153505 Ga0307408_1001535053 284
96 3300031727 Ga0316576_10004213 Ga0316576_100042133 284
97 3300031727 Ga0316576_10014652 Ga0316576_100146522 284
98 3300031731 Ga0307405_10015345 Ga0307405_100153455 284
99 3300031731 Ga0307405_10041903 Ga0307405_100419032 284
100 3300031824 Ga0307413_10000470 Ga0307413_1000047010 284
101 3300031824 Ga0307413_10064848 Ga0307413_100648482 284
102 3300031852 Ga0307410_10023453 Ga0307410_100234532 284
103 3300031901 Ga0307406_10006684 Ga0307406_100066844 284
104 3300031903 Ga0307407_10007459 Ga0307407_100074592 284
105 3300031903 Ga0307407_10019908 Ga0307407_100199082 284
106 3300031911 Ga0307412_10010444 Ga0307412_100104445 284
107 3300031911 Ga0307412_10019810 Ga0307412_100198102 284
108 3300031911 Ga0307412_10134839 Ga0307412_101348392 284
109 3300031995 Ga0307409_100053858 Ga0307409_1000538582 284
110 3300031995 Ga0307409_100207655 Ga0307409_1002076551 284
111 3300032002 Ga0307416_100007667 Ga0307416_1000076675 284
112 3300032002 Ga0307416_100018665 Ga0307416_1000186653 284
113 3300032002 Ga0307416_100272996 Ga0307416_1002729963 284
114 3300032004 Ga0307414_10006735 Ga0307414_100067356 284
115 3300032004 Ga0307414_10045916 Ga0307414_100459163 284
116 3300032004 Ga0307414_10063713 Ga0307414_100637132 284
117 3300032005 Ga0307411_10038236 Ga0307411_100382365 284
118 3300032005 Ga0307411_10154152 Ga0307411_101541521 284
119 3300032126 Ga0307415_100016122 Ga0307415_1000161221 284
120 3300032126 Ga0307415_100052083 Ga0307415_1000520832 284
121 3300037418 Ga0395900_0238376 Ga0395900_0238376_426_1322 284
122 3300037471 Ga0395905_0014593 Ga0395905_0014593_4241_5137 284
123 3300035116 Ga0373945_0007157 Ga0373945_0007157_2679_3563 285
124 3300035410 Ga0373924_0008549 Ga0373924_0008549_1902_2786 285
125 3300035692 Ga0373935_0038440 Ga0373935_0038440_853_1737 285
126 3300035725 Ga0373947_0041802 Ga0373947_0041802_922_1806 285
127 3300037068 Ga0373925_0025796 Ga0373925_0025796_1745_2629 285
128 3300044712 Ga0453684_0553120 Ga0453684_0553120_218_1090 285
129 3300046475 Ga0495639_0064650 Ga0495639_0064650_79_963 285
130 3300046681 Ga0495647_0033025 Ga0495647_0033025_722_1606 285
131 3300053088 Ga0500644_0070082 Ga0500644_0070082_370_1239 285
132 3300053145 Ga0500586_017457 Ga0500586_017457_74_943 285
133 3300005331 Ga0070670_100017070 Ga0070670_1000170709 286
134 3300005334 Ga0068869_100000007 Ga0068869_10000000720 286
135 3300005347 Ga0070668_100005031 Ga0070668_1000050314 286
136 3300005347 Ga0070668_100038664 Ga0070668_1000386645 286
137 3300005353 Ga0070669_100009431 Ga0070669_1000094313 286
138 3300005367 Ga0070667_100001939 Ga0070667_10000193915 286
139 3300005367 Ga0070667_100210820 Ga0070667_1002108201 286
140 3300005406 Ga0070703_10083434 Ga0070703_100834341 286
141 3300005440 Ga0070705_100195484 Ga0070705_1001954842 286
142 3300005441 Ga0070700_100095671 Ga0070700_1000956712 286
143 3300005445 Ga0070708_100144154 Ga0070708_1001441542 286
144 3300005456 Ga0070678_100175077 Ga0070678_1001750772 286
145 3300005459 Ga0068867_100005604 Ga0068867_1000056043 286
146 3300005530 Ga0070679_100207769 Ga0070679_1002077693 286
147 3300005535 Ga0070684_100019993 Ga0070684_10001999311 286
148 3300005563 Ga0068855_100108909 Ga0068855_1001089096 286
149 3300005563 Ga0068855_100118756 Ga0068855_1001187563 286
150 3300005577 Ga0068857_100000676 Ga0068857_10000067612 286
151 3300005616 Ga0068852_100324090 Ga0068852_1003240902 286
152 3300005618 Ga0068864_100002644 Ga0068864_1000026445 286
153 3300005719 Ga0068861_100020623 Ga0068861_1000206233 286
154 3300005840 Ga0068870_10004850 Ga0068870_100048504 286
155 3300005842 Ga0068858_100023342 Ga0068858_1000233424 286
156 3300005843 Ga0068860_100005878 Ga0068860_1000058783 286
157 3300006852 Ga0075433_10012635 Ga0075433_100126352 286
158 3300006881 Ga0068865_100080509 Ga0068865_1000805093 286
159 3300009101 Ga0105247_10017047 Ga0105247_100170473 286
160 3300009147 Ga0114129_10002714 Ga0114129_100027148 286
161 3300009177 Ga0105248_10001664 Ga0105248_1000166411 286
162 3300009553 Ga0105249_10069254 Ga0105249_100692542 286
163 3300011119 Ga0105246_10450434 Ga0105246_104504342 286
164 3300013306 Ga0163162_10124661 Ga0163162_101246613 286
165 3300013308 Ga0157375_10008817 Ga0157375_1000881710 286
166 3300014325 Ga0163163_10001377 Ga0163163_1000137717 286
167 3300014968 Ga0157379_10000142 Ga0157379_1000014245 286
168 3300025903 Ga0207680_10000912 Ga0207680_100009129 286
169 3300025908 Ga0207643_10007243 Ga0207643_100072434 286
170 3300025915 Ga0207693_10172041 Ga0207693_101720412 286
171 3300025916 Ga0207663_10389022 Ga0207663_103890222 286
172 3300025923 Ga0207681_10010197 Ga0207681_100101974 286
173 3300025941 Ga0207711_10080692 Ga0207711_100806922 286
174 3300025942 Ga0207689_10000142 Ga0207689_1000014238 286
175 3300025961 Ga0207712_10056633 Ga0207712_100566332 286
176 3300026035 Ga0207703_10000195 Ga0207703_1000019511 286
177 3300026089 Ga0207648_10005172 Ga0207648_100051726 286
178 3300026095 Ga0207676_10568184 Ga0207676_105681842 286
179 3300026116 Ga0207674_10006651 Ga0207674_1000665112 286
180 3300026118 Ga0207675_100001551 Ga0207675_10000155123 286
181 3300026142 Ga0207698_10370645 Ga0207698_103706452 286
182 3300027360 Ga0209969_1001760 Ga0209969_10017605 286
183 3300027471 Ga0209995_1002586 Ga0209995_10025862 286
184 3300027526 Ga0209968_1001778 Ga0209968_10017784 286
185 3300027543 Ga0209999_1003810 Ga0209999_10038102 286
186 3300027665 Ga0209983_1000173 Ga0209983_10001736 286
187 3300027682 Ga0209971_1000273 Ga0209971_10002739 286
188 3300027717 Ga0209998_10001750 Ga0209998_100017502 286
189 3300027876 Ga0209974_10000244 Ga0209974_1000024414 286
190 3300028380 Ga0268265_10002425 Ga0268265_100024252 286
191 3300028381 Ga0268264_10000606 Ga0268264_1000060632 286
192 3300031548 Ga0307408_100019267 Ga0307408_1000192673 286
193 3300031824 Ga0307413_10011057 Ga0307413_100110573 286
194 3300031824 Ga0307413_10044643 Ga0307413_100446432 286
195 3300031824 Ga0307413_10057289 Ga0307413_100572893 286
196 3300031852 Ga0307410_10013944 Ga0307410_100139445 286
197 3300031901 Ga0307406_10127760 Ga0307406_101277602 286
198 3300031911 Ga0307412_10225325 Ga0307412_102253252 286
199 3300031995 Ga0307409_100009849 Ga0307409_1000098496 286
200 3300032002 Ga0307416_100296817 Ga0307416_1002968173 286
201 3300032004 Ga0307414_10055041 Ga0307414_100550415 286
202 3300035120 Ga0373957_0095630 Ga0373957_0095630_105_992 286
203 3300036401 Ga0373937_0017225 Ga0373937_0017225_887_1774 286
204 3300046462 Ga0495651_0175356 Ga0495651_0175356_168_1055 286
205 3300046530 Ga0495654_0002040 Ga0495654_0002040_10441_11340 286
206 3300046683 Ga0495658_0025681 Ga0495658_0025681_2187_3077 286
207 3300047471 Ga0495684_0245959 Ga0495684_0245959_141_1028 286
208 3300048905 Ga0496102_0011410 Ga0496102_0011410_1312_2196 286
209 3300048906 Ga0496103_0058552 Ga0496103_0058552_987_1871 286
210 3300048910 Ga0496107_0232437 Ga0496107_0232437_332_1216 286
211 3300048912 Ga0496109_0253800 Ga0496109_0253800_145_1029 286
212 3300048916 Ga0496113_0195140 Ga0496113_0195140_448_1332 286
213 3300048928 Ga0496125_0028489 Ga0496125_0028489_2658_3545 286
214 3300048929 Ga0496126_0071662 Ga0496126_0071662_1733_2620 286
215 3300049577 Ga0501041_0100105 Ga0501041_0100105_49_951 286
216 3300049590 Ga0501074_0099043 Ga0501074_0099043_1021_1923 286
217 3300049743 Ga0501081_0011262 Ga0501081_0011262_125_1021 286
218 3300050507 nmdc:mga05p37_4872_c1 nmdc:mga05p37_4872_c1_8568_9464 286
219 3300050510 nmdc:mga06r32_379510_c1 nmdc:mga06r32_379510_c1_91_990 286
220 3300050515 nmdc:mga0a205_3861_c1 nmdc:mga0a205_3861_c1_6104_7000 286
221 3300032004 Ga0307414_10522015 Ga0307414_105220151 287
222 3300032005 Ga0307411_10270724 Ga0307411_102707242 287
223 3300032126 Ga0307415_100437901 Ga0307415_1004379011 287
224 3300005328 Ga0070676_10122777 Ga0070676_101227772 288
225 3300005333 Ga0070677_10001293 Ga0070677_100012936 288
226 3300005335 Ga0070666_10114109 Ga0070666_101141092 288
227 3300005339 Ga0070660_100104164 Ga0070660_1001041643 288
228 3300005347 Ga0070668_100045716 Ga0070668_1000457163 288
229 3300005354 Ga0070675_100006243 Ga0070675_1000062438 288
230 3300005356 Ga0070674_100009100 Ga0070674_1000091002 288
231 3300005366 Ga0070659_100091629 Ga0070659_1000916292 288
232 3300005456 Ga0070678_100086474 Ga0070678_1000864743 288
233 3300005457 Ga0070662_100129700 Ga0070662_1001297002 288
234 3300005616 Ga0068852_100193891 Ga0068852_1001938912 288
235 3300005719 Ga0068861_100020104 Ga0068861_1000201046 288
236 3300006844 Ga0075428_100088513 Ga0075428_1000885132 288
237 3300009553 Ga0105249_10057419 Ga0105249_100574195 288
238 3300013104 Ga0157370_10000893 Ga0157370_1000089335 288
239 3300013306 Ga0163162_10331844 Ga0163162_103318441 288
240 3300013308 Ga0157375_10002623 Ga0157375_1000262313 288
241 3300014745 Ga0157377_10074763 Ga0157377_100747633 288
242 3300025315 Ga0207697_10018789 Ga0207697_100187892 288
243 3300025893 Ga0207682_10000959 Ga0207682_100009598 288
244 3300025904 Ga0207647_10036508 Ga0207647_100365082 288
245 3300025908 Ga0207643_10005381 Ga0207643_100053817 288
246 3300025919 Ga0207657_10079478 Ga0207657_100794783 288
247 3300025925 Ga0207650_10128680 Ga0207650_101286803 288
248 3300025926 Ga0207659_10384946 Ga0207659_103849462 288
249 3300025933 Ga0207706_10004966 Ga0207706_100049665 288
250 3300025937 Ga0207669_10078548 Ga0207669_100785483 288
251 3300025940 Ga0207691_10013316 Ga0207691_100133167 288
252 3300025942 Ga0207689_10014212 Ga0207689_100142123 288
253 3300025986 Ga0207658_10306641 Ga0207658_103066412 288
254 3300026067 Ga0207678_10080980 Ga0207678_100809805 288
255 3300026089 Ga0207648_10001385 Ga0207648_100013858 288
256 3300026095 Ga0207676_10381982 Ga0207676_103819822 288
257 3300026116 Ga0207674_10328857 Ga0207674_103288571 288
258 3300026118 Ga0207675_100013274 Ga0207675_1000132746 288
259 3300026121 Ga0207683_10050177 Ga0207683_100501772 288
260 3300028380 Ga0268265_10164631 Ga0268265_101646312 288
261 3300031456 Ga0307513_10069762 Ga0307513_100697624 288

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01734

Patatin

Patatin-like phospholipase

36

210

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
5fqu-assembly1.cif.gz_A orthorhombic crystal structure of of plpd (selenomethionine derivative) 0.8378 7 279
5fya-assembly1.cif.gz_A cubic crystal of the native plpd 0.8349 9 279
5fqu-assembly1.cif.gz_A orthorhombic crystal structure of of plpd (selenomethionine derivative) 0.8315 7 279
5fya-assembly1.cif.gz_B cubic crystal of the native plpd 0.8284 7 280
5fya-assembly1.cif.gz_A cubic crystal of the native plpd 0.8256 9 279
ID Description Score Start End Superfamily
af_O69695_801_1044_3.40.1090.10 Alpha Beta;3-Layer(aba) Sandwich;Cytosolic phospholipase A2 catalytic domain;Cytosolic phospholipase A2 catalytic domain 0.7939 8 260 3.40.1090.10
af_O69695_801_1044_3.40.1090.10 Alpha Beta;3-Layer(aba) Sandwich;Cytosolic phospholipase A2 catalytic domain;Cytosolic phospholipase A2 catalytic domain 0.7817 8 260 3.40.1090.10
af_B0G109_19_215_3.40.1090.10 Alpha Beta;3-Layer(aba) Sandwich;Cytosolic phospholipase A2 catalytic domain;Cytosolic phospholipase A2 catalytic domain 0.7519 2 190 3.40.1090.10
af_Q54QX6_878_1208_3.40.1090.10 Alpha Beta;3-Layer(aba) Sandwich;Cytosolic phospholipase A2 catalytic domain;Cytosolic phospholipase A2 catalytic domain 0.7489 5 282 3.40.1090.10
af_Q8MXR3_198_540_3.40.1090.10 Alpha Beta;3-Layer(aba) Sandwich;Cytosolic phospholipase A2 catalytic domain;Cytosolic phospholipase A2 catalytic domain 0.7435 6 282 3.40.1090.10
ID Description Score Start End GO Terms
AF-A0A350G4T4-F1-model_v4 PNPLA domain-containing protein 0.9849 1 282 GO:0016042
GO:0016787
AF-A0A350G4T4-F1-model_v4 PNPLA domain-containing protein 0.9781 1 282 GO:0016042
GO:0016787
AF-A0A136KMG4-F1-model_v4 Patatin 0.965 95 282 GO:0016042
GO:0016787
AF-A0A4R1VB19-F1-model_v4 deleted 0.9411 1 287
AF-A0A1W2C3U0-F1-model_v4 NTE family protein 0.9268 2 288 GO:0016042
GO:0016787

Feature Viewer

pLDDT pTM Quality
83.78 0.85 High
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Predicted Structure (AlphaFold2)

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