F370362

General Info

Members Datasets Scaffolds Average Seq Length
261 195 248 318

Family's Representative Sequence

Representative Sequence 3300014497|Ga0182008_10029684|Ga0182008_100296843
Length 353
Sequence MRTNGAGGTGAADRSAQVQSDERRPDSRKTRISSMPSLKNFALIGAAGYIAPRHMQAIKATGNQLLAAFDPNDSVGIIDSHFPSADFFTEFERFDRHVDLRRRAGNGGQIDYVSICSPNYLHDSHMRFALRSGAHAICEKPLVLNPWNIDGLLEIERETGKSINTILQLRLHPAIIALRDKVRSEHGDSKHEVDLAYVTSRGHWYLQSWKGDPKKSGGIATNIGVHFFDMLHYIFGALQINVVHLSSDTKAAGYLEYENARVRWFLSVDVEDVPAAQRESGQRTYRSITVDGEEIEFSGGFTDLHNRSYEEILAGRGFRLEENRTAIETVAAIRNGKAVPFAGDGHPFLKRQA

Samples

Sample ID Description Type Environment
1 2643221562 Rhodanobacter sp. Root561 Isolate Unclassified
2 2643221577 Rhodanobacter sp. Root627 Isolate Unclassified
3 2643221588 Altererythrobacter sp. Root672 Isolate Unclassified
4 2643221621 Achromobacter sp. Root83 Isolate Unclassified
5 2643221685 Rhodanobacter sp. Root480 Isolate Unclassified
6 2690315857 Rheinheimera sp. EpRS3 Isolate Unclassified
7 2887375801 Parapusillimonas sp. SGNA-6 Isolate Rhizosphere
8 2898795034 Rhodobacter sp. SGA-6-6 Isolate Rhizosphere
9 2919509842 Flavobacterium arsenatis 3773 Isolate Unclassified
10 2919534386 Rheinheimera pacifica 3879 Isolate Unclassified
11 2939611941 Rhodanobacter soli 1757 Isolate Rhizosphere
12 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
13 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
14 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
15 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
16 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
17 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
18 3300002771 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB Metagenome Endosphere
19 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
20 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
21 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
22 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
23 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
24 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
25 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
26 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
27 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
28 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
29 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
30 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
31 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
32 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
33 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
34 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
35 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
36 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
37 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
38 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
39 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
40 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
41 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
42 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
43 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
44 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
45 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
46 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
47 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
48 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
49 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
50 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
51 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
52 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
53 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
54 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
55 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
56 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
57 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
58 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
59 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
60 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
61 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
62 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
63 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
64 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
65 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
66 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
67 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
68 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
69 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
70 3300012500 Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.4.old.080610 Metagenome Rhizosphere
71 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
72 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
73 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
74 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
75 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
76 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
77 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
78 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
79 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
80 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
81 3300015683 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_F04 Metagenome Rhizosphere
82 3300015687 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 002.1_G08 Metagenome Rhizosphere
83 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
84 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
85 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
86 3300020075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
87 3300020076 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3) (version 3) Metatranscriptome Rhizosphere
88 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
89 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
90 3300020610 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
91 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
92 3300025207 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
93 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
94 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
95 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
96 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
97 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
98 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
99 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
100 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
101 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
102 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
103 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
104 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
105 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
106 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
107 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
108 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
129 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
131 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
132 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
133 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
134 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
135 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
136 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
137 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
138 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
139 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
140 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
141 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
142 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
143 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
144 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
145 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
146 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
147 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
148 3300044672 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - COA3E Metagenome Unclassified
149 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
150 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
151 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
152 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
153 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
154 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
155 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
156 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
157 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
158 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
159 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
160 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
161 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
162 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
163 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
164 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
165 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
166 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
167 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
168 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
169 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
170 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
171 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
172 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
173 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
174 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
175 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
176 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
177 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
178 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
179 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
180 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
181 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
182 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
183 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
184 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
185 3300049778 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I22_A_5_control Metagenome Rhizosphere
186 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
187 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
188 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
189 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
190 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
191 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
192 3300059503 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 21R_SD_T1_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
193 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
194 8002392321 Alcaligenes faecalis Mc250 Isolate Rhizosphere
195 8048746797 Alcaligenes endophyticus DSM 100498 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 90.8
Metatranscriptomes 4.21
Isolates 4.98

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.64
Nodule 0
Rhizoplane 3.07
Rhizosphere 67.82
Stem 0
Stem Tuber 0
Unclassified 16.48

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10030729 3300001979 Bacteria 1742
2 JGI24737J22298_10002950 3300001990 Bacteria 6035
3 JGI24735J21928_10000461 3300002067 Bacteria 14302
4 JGI25156J39149_1001858 3300002705 Bacteria 8259
5 JGI25156J39149_1006742 3300002705 Bacteria 3098
6 JGI25162J39368_1000048 3300002737 Bacteria 159652
7 JGI25157J39369_1000219 3300002741 Bacteria 46921
8 JGI25157J39369_1000371 3300002741 Bacteria 30868
9 JGI25157J39369_1000931 3300002741 Bacteria 13857
10 JGI25163J39215_1000404 3300002771 Bacteria 13648
11 JGI25164J39214_1000151 3300002772 Bacteria 65800
12 JGI25165J46597_1000009 3300003214 Bacteria 467965
13 JGI25153J46596_10017796 3300003215 Bacteria 2785
14 rootH1_10066809 3300003316 Bacteria 2512
15 rootH1_10069221 3300003316 Bacteria 2171
16 rootL2_10024973 3300003322 Bacteria 1387
17 rootH1_10263868 3300003323 Bacteria 1598
18 Ga0055538_1000774 3300003751 Bacteria 9035
19 Ga0055533_1000638 3300003756 Bacteria 11837
20 Ga0055533_1007966 3300003756 Bacteria 1387
21 Ga0055535_1000016 3300003761 Bacteria 252398
22 Ga0055542_1000045 3300003762 Bacteria 203558
23 Ga0055529_1000020 3300003763 Bacteria 324857
24 Ga0055529_1003015 3300003763 Bacteria 2956
25 Ga0055531_10003321 3300003794 Bacteria 10297
26 Ga0058692_1000034 3300003856 Bacteria 172911
27 Ga0065165_1002313 3300005262 Bacteria 16672
28 Ga0065704_10072916 3300005289 Bacteria 7813
29 Ga0065707_10084620 3300005295 Bacteria 6970
30 Ga0070658_10000002 3300005327 Bacteria 637290
31 Ga0070683_100054712 3300005329 Bacteria 3701
32 Ga0070677_10000042 3300005333 Bacteria 39651
33 Ga0070666_10062974 3300005335 Bacteria 2513
34 Ga0070682_100043690 3300005337 Bacteria 2772
35 Ga0068868_100034502 3300005338 Bacteria 3906
36 Ga0070660_100000379 3300005339 Bacteria 29599
37 Ga0070661_100025677 3300005344 Bacteria 4235
38 Ga0070692_10003260 3300005345 Bacteria 6544
39 Ga0070675_100000089 3300005354 Bacteria 53123
40 Ga0070714_100000161 3300005435 Bacteria 54480
41 Ga0070713_100005447 3300005436 Bacteria 8697
42 Ga0070663_100050112 3300005455 Bacteria 2968
43 Ga0070662_100023890 3300005457 Bacteria 4205
44 Ga0070662_100084759 3300005457 Bacteria 2367
45 Ga0068853_100012423 3300005539 Bacteria 6927
46 Ga0068853_100040382 3300005539 Bacteria 3981
47 Ga0070696_100084150 3300005546 Bacteria 2257
48 Ga0070693_100052371 3300005547 Bacteria 2340
49 Ga0070665_100003193 3300005548 Bacteria 17635
50 Ga0068855_100059070 3300005563 Bacteria 4488
51 Ga0068855_100064826 3300005563 Bacteria 4260
52 Ga0068857_100001826 3300005577 Bacteria 17121
53 Ga0068857_100104579 3300005577 Bacteria 2542
54 Ga0068854_100000218 3300005578 Bacteria 38701
55 Ga0068854_100020875 3300005578 Bacteria 4438
56 Ga0068856_100000725 3300005614 Bacteria 35791
57 Ga0068856_100064474 3300005614 Bacteria 3620
58 Ga0068852_100119824 3300005616 Bacteria 2406
59 Ga0068864_100058105 3300005618 Bacteria 3342
60 Ga0068851_10010458 3300005834 Bacteria 4334
61 Ga0068851_10082555 3300005834 Bacteria 1680
62 Ga0068858_100081511 3300005842 Bacteria 3007
63 Ga0068858_100125473 3300005842 Bacteria 2403
64 Ga0068871_100053254 3300006358 Bacteria 3279
65 Ga0075434_100420939 3300006871 Bacteria 1357
66 Ga0105240_10000162 3300009093 Bacteria 136882
67 Ga0105240_10000884 3300009093 Bacteria 53814
68 Ga0105240_10009942 3300009093 Bacteria 13412
69 Ga0105240_10097046 3300009093 Bacteria 3591
70 Ga0105240_10203425 3300009093 Bacteria 2319
71 Ga0105243_10000138 3300009148 Bacteria 83166
72 Ga0105242_10001776 3300009176 Bacteria 17016
73 Ga0105248_10024542 3300009177 Bacteria 6703
74 Ga0105237_10000436 3300009545 Bacteria 59400
75 Ga0105237_10000624 3300009545 Bacteria 49467
76 Ga0105237_10011244 3300009545 Bacteria 9475
77 Ga0105238_10119748 3300009551 Bacteria 2612
78 Ga0105238_10140180 3300009551 Bacteria 2395
79 Ga0105238_10280543 3300009551 Bacteria 1647
80 Ga0105239_10000050 3300010375 Bacteria 173908
81 Ga0105239_10028162 3300010375 Bacteria 6182
82 Ga0105239_10126021 3300010375 Bacteria 2846
83 Ga0105239_10339314 3300010375 Bacteria 1696
84 Ga0157314_1000481 3300012500 Bacteria 3844
85 Ga0157371_10027597 3300013102 Bacteria 4117
86 Ga0157370_10172874 3300013104 Bacteria 2008
87 Ga0157369_10043636 3300013105 Bacteria 4886
88 Ga0157374_10003207 3300013296 Bacteria 13736
89 Ga0157378_10368696 3300013297 Unclassified 1407
90 Ga0163162_10026095 3300013306 Bacteria 5775
91 Ga0182008_10029684 3300014497 Bacteria 2761
92 Ga0157377_10071440 3300014745 Bacteria 2007
93 Ga0157376_10001817 3300014969 Bacteria 14206
94 Ga0182007_10009562 3300015262 Bacteria 3900
95 Ga0183362_10004 3300015683 Bacteria 569303
96 Ga0183368_1004 3300015687 Bacteria 1211761
97 Ga0163161_10001525 3300017792 Bacteria 17151
98 Ga0163161_10012473 3300017792 Bacteria 5900
99 Ga0197907_10524616 3300020069 Bacteria 5056
100 Ga0206356_10664316 3300020070 Bacteria 6750
101 Ga0206349_1207915 3300020075 Bacteria 5946
102 Ga0206355_1400158 3300020076 Bacteria 3305
103 Ga0206350_10573595 3300020080 Bacteria 6412
104 Ga0206350_10904467 3300020080 Bacteria 2277
105 Ga0206353_11117971 3300020082 Bacteria 3758
106 Ga0154015_1180567 3300020610 Bacteria 1719
107 Ga0224712_10000382 3300022467 Bacteria 8596
108 Ga0224712_10062715 3300022467 Bacteria 1486
109 Ga0209760_100497 3300025207 Bacteria 8315
110 Ga0209784_100013 3300025224 Bacteria 518664
111 Ga0209674_100063 3300025226 Bacteria 275507
112 Ga0209674_101103 3300025226 Bacteria 7983
113 Ga0209672_103437 3300025228 Bacteria 3281
114 Ga0207427_100030 3300025231 Bacteria 358045
115 Ga0209437_100012 3300025233 Bacteria 792625
116 Ga0209258_100019 3300025242 Bacteria 566728
117 Ga0209258_100462 3300025242 Bacteria 44310
118 Ga0209646_1000549 3300025246 Bacteria 16002
119 Ga0209026_1000015 3300025250 Bacteria 395555
120 Ga0209026_1000207 3300025250 Bacteria 81332
121 Ga0209026_1000270 3300025250 Bacteria 62482
122 Ga0209148_1000001 3300025254 Bacteria 2545271
123 Ga0209759_1000425 3300025256 Bacteria 51338
124 Ga0209759_1001880 3300025256 Bacteria 10414
125 Ga0209759_1002519 3300025256 Bacteria 7970
126 Ga0209129_1003465 3300025258 Bacteria 6840
127 Ga0209233_1000002 3300025261 Bacteria 2501366
128 Ga0209455_1000027 3300025272 Bacteria 566710
129 Ga0209455_1000490 3300025272 Bacteria 29060
130 Ga0209758_1001407 3300025297 Bacteria 28504
131 Ga0209758_1013988 3300025297 Bacteria 4314
132 Ga0209257_1000285 3300025304 Bacteria 112113
133 Ga0207656_10010383 3300025321 Bacteria 3487
134 Ga0207682_10003479 3300025893 Bacteria 6826
135 Ga0207680_10012350 3300025903 Bacteria 4348
136 Ga0207647_10028033 3300025904 Bacteria 3664
137 Ga0207647_10045962 3300025904 Bacteria 2722
138 Ga0207705_10000005 3300025909 Bacteria 673478
139 Ga0207705_10010066 3300025909 Bacteria 6883
140 Ga0207695_10000198 3300025913 Bacteria 167880
141 Ga0207695_10000493 3300025913 Bacteria 84173
142 Ga0207695_10000882 3300025913 Bacteria 54604
143 Ga0207695_10002325 3300025913 Bacteria 28342
144 Ga0207695_10002464 3300025913 Bacteria 27322
145 Ga0207695_10009730 3300025913 Bacteria 11833
146 Ga0207695_10031434 3300025913 Bacteria 5822
147 Ga0207671_10000422 3300025914 Bacteria 58677
148 Ga0207671_10001094 3300025914 Bacteria 32765
149 Ga0207671_10129271 3300025914 Bacteria 1938
150 Ga0207657_10000749 3300025919 Bacteria 34403
151 Ga0207657_10002134 3300025919 Bacteria 21419
152 Ga0207649_10008085 3300025920 Bacteria 5724
153 Ga0207694_10020986 3300025924 Bacteria 4944
154 Ga0207694_10208077 3300025924 Bacteria 1593
155 Ga0207659_10001385 3300025926 Bacteria 14465
156 Ga0207664_10000109 3300025929 Bacteria 72701
157 Ga0207664_10008488 3300025929 Bacteria 7170
158 Ga0207690_10000252 3300025932 Bacteria 38986
159 Ga0207706_10017085 3300025933 Bacteria 6542
160 Ga0207686_10052756 3300025934 Bacteria 2539
161 Ga0207661_10172569 3300025944 Unclassified 1883
162 Ga0207667_10000752 3300025949 Bacteria 42064
163 Ga0207667_10002209 3300025949 Bacteria 24429
164 Ga0207667_10021608 3300025949 Bacteria 7129
165 Ga0207667_10098768 3300025949 Bacteria 3012
166 Ga0207640_10000275 3300025981 Bacteria 34681
167 Ga0207640_10000512 3300025981 Bacteria 23383
168 Ga0207640_10008383 3300025981 Bacteria 5745
169 Ga0207703_10023530 3300026035 Bacteria 4840
170 Ga0207639_10318962 3300026041 Bacteria 1379
171 Ga0207678_10000898 3300026067 Bacteria 27299
172 Ga0207702_10000104 3300026078 Bacteria 98370
173 Ga0207674_10001200 3300026116 Bacteria 33740
174 Ga0207674_10048274 3300026116 Bacteria 4357
175 Ga0316576_10113102 3300031727 Bacteria 2036
176 Ga0307516_10335150 3300031730 Bacteria 1181
177 Ga0307410_10037525 3300031852 Bacteria 3166
178 Ga0307414_10417831 3300032004 Bacteria 1169
179 Ga0316582_0010601 3300036647 Bacteria 5055
180 Ga0316584_0149903 3300036712 Unclassified 1736
181 Ga0373925_0023415 3300037068 Bacteria 4505
182 Ga0395899_0004139 3300037312 Bacteria 11403
183 Ga0395899_0049747 3300037312 Bacteria 3115
184 Ga0395900_0005663 3300037418 Bacteria 13065
185 Ga0395898_0083952 3300037466 Bacteria 3070
186 Ga0395905_0102428 3300037471 Bacteria 2687
187 Ga0316581_0007911 3300037588 Unclassified 2875
188 Ga0395901_0002860 3300038443 Bacteria 17438
189 Ga0395901_0012603 3300038443 Bacteria 8580
190 Ga0400483_062160 3300039062 Bacteria 34333
191 Ga0400483_189200 3300039062 Bacteria 26250
192 Ga0400483_190950 3300039062 Bacteria 1062
193 Ga0400483_196854 3300039062 Bacteria 4372
194 Ga0400489_54427 3300039093 Bacteria 1321
195 Ga0451577_0073453 3300042876 Bacteria 3051
196 Ga0466972_0073173 3300044658 Bacteria 1633
197 Ga0466982_0000007 3300044672 Bacteria 250854
198 Ga0466965_0069067 3300044683 Bacteria 1774
199 Ga0466966_0002555 3300044684 Bacteria 11912
200 Ga0453684_0001959 3300044712 Bacteria 53067
201 Ga0453684_0220635 3300044712 Unclassified 2196
202 Ga0466971_0000694 3300044719 Bacteria 13464
203 Ga0466968_0021718 3300044735 Bacteria 2601
204 Ga0466957_0128671 3300044842 Bacteria 1620
205 Ga0466960_0051348 3300044901 Bacteria 1991
206 Ga0451576_0001672 3300045051 Bacteria 36794
207 Ga0466967_0112880 3300045976 Bacteria 2499
208 Ga0495587_0001319 3300046536 Bacteria 16480
209 Ga0495588_0131765 3300046674 Bacteria 1319
210 Ga0496101_0007629 3300048904 Bacteria 7025
211 Ga0496105_0014752 3300048908 Bacteria 6221
212 Ga0496106_0032292 3300048909 Bacteria 3903
213 Ga0496112_0225420 3300048915 Bacteria 1830
214 Ga0496113_0055999 3300048916 Bacteria 2958
215 Ga0496114_0230074 3300048917 Bacteria 1629
216 Ga0496115_0000040 3300048918 Bacteria 122975
217 Ga0496115_0060327 3300048918 Bacteria 3056
218 Ga0496117_0036716 3300048920 Bacteria 3662
219 Ga0496118_0000839 3300048921 Bacteria 48884
220 Ga0496118_0004745 3300048921 Bacteria 15908
221 Ga0496119_0000109 3300048922 Bacteria 116054
222 Ga0496120_0000150 3300048923 Bacteria 116072
223 Ga0496121_0000013 3300048924 Bacteria 614976
224 Ga0496121_0011320 3300048924 Bacteria 9926
225 Ga0496121_0031077 3300048924 Bacteria 4889
226 Ga0496123_0118249 3300048926 Bacteria 1497
227 Ga0496125_0000766 3300048928 Bacteria 52572
228 Ga0496126_0000240 3300048929 Bacteria 117890
229 Ga0501032_0004233 3300049569 Bacteria 10849
230 Ga0501033_0011733 3300049570 Bacteria 6701
231 Ga0501033_0235098 3300049570 Bacteria 1301
232 Ga0501037_0049663 3300049573 Bacteria 3072
233 Ga0501038_0285648 3300049574 Bacteria 1298
234 Ga0501046_0040063 3300049580 Bacteria 3746
235 Ga0501067_0020113 3300049583 Bacteria 3693
236 Ga0501073_0001337 3300049589 Bacteria 18169
237 Ga0501077_0080597 3300049593 Bacteria 2062
238 Ga0501080_0037374 3300049742 Bacteria 4535
239 Ga0501083_0189800 3300049744 Bacteria 1341
240 Ga0501282_000005 3300049778 Bacteria 42046
241 Ga0501035_0080487 3300049822 Bacteria 2876
242 Ga0501044_0258959 3300049823 Bacteria 1678
243 nmdc:mga0n895_556252_c1 3300050512 Bacteria 1153
244 Ga0500595_000483 3300053119 Bacteria 24510
245 Ga0500588_0014009 3300053146 Bacteria 2023
246 Ga0501084_0239187 3300054114 Bacteria 1532
247 Ga0587080_002231 3300059503 Bacteria 2251
248 Ga0501082_0005945 3300060353 Bacteria 10587

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300009148 Ga0105243_10000138 Ga0105243_1000013844 275
2 3300044712 Ga0453684_0220635 Ga0453684_0220635_404_1381 288
3 3300039062 Ga0400483_190950 Ga0400483_190950_111_1019 292
4 3300039062 Ga0400483_062160 Ga0400483_062160_15340_16239 296
5 3300031730 Ga0307516_10335150 Ga0307516_103351501 298
6 3300048916 Ga0496113_0055999 Ga0496113_0055999_11_907 298
7 3300037471 Ga0395905_0102428 Ga0395905_0102428_440_1345 300
8 3300044735 Ga0466968_0021718 Ga0466968_0021718_11_913 300
9 3300006871 Ga0075434_100420939 Ga0075434_1004209391 304
10 3300050512 nmdc:mga0n895_556252_c1 nmdc:mga0n895_556252_c1_164_1078 304
11 iso_pu_bacteria 2898795034 2898796449 308
12 iso_pu_bacteria 2643221562 2643829229 310
13 iso_pu_bacteria 2887375801 2887377779 310
14 iso_pu_bacteria 8002392321 8002395754 310
15 iso_pu_bacteria 8048746797 8048747368 310
16 iso_pu_bacteria 2643221588 2643949105 311
17 iso_pu_bacteria 2643221621 2644123276 311
18 iso_pu_bacteria 2919509842 2919511789 312
19 3300005333 Ga0070677_10000042 Ga0070677_1000004222 313
20 3300005457 Ga0070662_100084759 Ga0070662_1000847592 313
21 3300025893 Ga0207682_10003479 Ga0207682_100034795 313
22 3300038443 Ga0395901_0012603 Ga0395901_0012603_3922_4875 313
23 3300039062 Ga0400483_189200 Ga0400483_189200_1243_2214 313
24 3300039062 Ga0400483_196854 Ga0400483_196854_2695_3666 313
25 iso_pu_bacteria 2690315857 2691331788 313
26 iso_pu_bacteria 2919534386 2919537054 313
27 3300005329 Ga0070683_100054712 Ga0070683_1000547122 314
28 3300005354 Ga0070675_100000089 Ga0070675_1000000892 314
29 3300014745 Ga0157377_10071440 Ga0157377_100714401 314
30 3300025926 Ga0207659_10001385 Ga0207659_1000138512 314
31 3300025944 Ga0207661_10172569 Ga0207661_101725692 314
32 3300031727 Ga0316576_10113102 Ga0316576_101131023 314
33 3300036647 Ga0316582_0010601 Ga0316582_0010601_931_1878 314
34 3300036712 Ga0316584_0149903 Ga0316584_0149903_208_1155 314
35 3300037588 Ga0316581_0007911 Ga0316581_0007911_709_1656 314
36 3300039093 Ga0400489_54427 Ga0400489_54427_238_1185 314
37 3300049573 Ga0501037_0049663 Ga0501037_0049663_344_1288 314
38 3300002067 JGI24735J21928_10000461 JGI24735J21928_100004612 315
39 3300003756 Ga0055533_1000638 Ga0055533_10006389 315
40 3300003856 Ga0058692_1000034 Ga0058692_100003441 315
41 3300005289 Ga0065704_10072916 Ga0065704_100729162 315
42 3300005295 Ga0065707_10084620 Ga0065707_100846201 315
43 3300005457 Ga0070662_100023890 Ga0070662_1000238903 315
44 3300010375 Ga0105239_10339314 Ga0105239_103393142 315
45 3300015683 Ga0183362_10004 Ga0183362_10004137 315
46 3300015687 Ga0183368_1004 Ga0183368_1004787 315
47 3300017792 Ga0163161_10001525 Ga0163161_100015252 315
48 3300017792 Ga0163161_10012473 Ga0163161_100124734 315
49 3300025226 Ga0209674_100063 Ga0209674_10006342 315
50 3300025242 Ga0209258_100462 Ga0209258_10046220 315
51 3300025904 Ga0207647_10045962 Ga0207647_100459623 315
52 3300044712 Ga0453684_0001959 Ga0453684_0001959_7970_8917 315
53 3300045976 Ga0466967_0112880 Ga0466967_0112880_851_1807 315
54 3300048918 Ga0496115_0000040 Ga0496115_0000040_112907_113863 315
55 3300048926 Ga0496123_0118249 Ga0496123_0118249_491_1447 315
56 3300049570 Ga0501033_0011733 Ga0501033_0011733_2839_3786 315
57 iso_pu_bacteria 2643221577 2643894069 315
58 iso_pu_bacteria 2643221685 2644476258 315
59 iso_pu_bacteria 2939611941 2939614784 315
60 3300002705 JGI25156J39149_1001858 JGI25156J39149_10018587 316
61 3300002741 JGI25157J39369_1000931 JGI25157J39369_10009317 316
62 3300003756 Ga0055533_1007966 Ga0055533_10079661 316
63 3300003763 Ga0055529_1003015 Ga0055529_10030153 316
64 3300005335 Ga0070666_10062974 Ga0070666_100629741 316
65 3300005337 Ga0070682_100043690 Ga0070682_1000436902 316
66 3300005338 Ga0068868_100034502 Ga0068868_1000345023 316
67 3300005344 Ga0070661_100025677 Ga0070661_1000256772 316
68 3300005345 Ga0070692_10003260 Ga0070692_100032605 316
69 3300005435 Ga0070714_100000161 Ga0070714_10000016142 316
70 3300005436 Ga0070713_100005447 Ga0070713_1000054474 316
71 3300005455 Ga0070663_100050112 Ga0070663_1000501122 316
72 3300005539 Ga0068853_100040382 Ga0068853_1000403822 316
73 3300005546 Ga0070696_100084150 Ga0070696_1000841503 316
74 3300005547 Ga0070693_100052371 Ga0070693_1000523712 316
75 3300005548 Ga0070665_100003193 Ga0070665_10000319310 316
76 3300005563 Ga0068855_100064826 Ga0068855_1000648264 316
77 3300005577 Ga0068857_100104579 Ga0068857_1001045791 316
78 3300005614 Ga0068856_100000725 Ga0068856_1000007258 316
79 3300005614 Ga0068856_100064474 Ga0068856_1000644744 316
80 3300005618 Ga0068864_100058105 Ga0068864_1000581053 316
81 3300005834 Ga0068851_10082555 Ga0068851_100825552 316
82 3300005842 Ga0068858_100125473 Ga0068858_1001254733 316
83 3300006358 Ga0068871_100053254 Ga0068871_1000532542 316
84 3300009093 Ga0105240_10203425 Ga0105240_102034252 316
85 3300009176 Ga0105242_10001776 Ga0105242_100017767 316
86 3300009177 Ga0105248_10024542 Ga0105248_100245424 316
87 3300009545 Ga0105237_10000624 Ga0105237_1000062417 316
88 3300009545 Ga0105237_10011244 Ga0105237_100112444 316
89 3300009551 Ga0105238_10119748 Ga0105238_101197482 316
90 3300009551 Ga0105238_10140180 Ga0105238_101401802 316
91 3300009551 Ga0105238_10280543 Ga0105238_102805432 316
92 3300010375 Ga0105239_10028162 Ga0105239_100281625 316
93 3300013102 Ga0157371_10027597 Ga0157371_100275973 316
94 3300013104 Ga0157370_10172874 Ga0157370_101728743 316
95 3300013105 Ga0157369_10043636 Ga0157369_100436365 316
96 3300013296 Ga0157374_10003207 Ga0157374_100032079 316
97 3300013297 Ga0157378_10368696 Ga0157378_103686962 316
98 3300013306 Ga0163162_10026095 Ga0163162_100260952 316
99 3300014497 Ga0182008_10029684 Ga0182008_100296843 316
100 3300014969 Ga0157376_10001817 Ga0157376_100018174 316
101 3300015262 Ga0182007_10009562 Ga0182007_100095621 316
102 3300020069 Ga0197907_10524616 Ga0197907_105246166 316
103 3300020070 Ga0206356_10664316 Ga0206356_106643166 316
104 3300020075 Ga0206349_1207915 Ga0206349_12079154 316
105 3300020076 Ga0206355_1400158 Ga0206355_14001582 316
106 3300020080 Ga0206350_10573595 Ga0206350_105735956 316
107 3300020082 Ga0206353_11117971 Ga0206353_111179712 316
108 3300020610 Ga0154015_1180567 Ga0154015_11805672 316
109 3300022467 Ga0224712_10062715 Ga0224712_100627152 316
110 3300025226 Ga0209674_101103 Ga0209674_1011032 316
111 3300025250 Ga0209026_1000207 Ga0209026_10002079 316
112 3300025250 Ga0209026_1000270 Ga0209026_10002707 316
113 3300025256 Ga0209759_1001880 Ga0209759_10018802 316
114 3300025256 Ga0209759_1002519 Ga0209759_10025192 316
115 3300025272 Ga0209455_1000490 Ga0209455_100049016 316
116 3300025903 Ga0207680_10012350 Ga0207680_100123502 316
117 3300025909 Ga0207705_10010066 Ga0207705_100100665 316
118 3300025913 Ga0207695_10000493 Ga0207695_1000049316 316
119 3300025913 Ga0207695_10000882 Ga0207695_100008823 316
120 3300025914 Ga0207671_10001094 Ga0207671_1000109417 316
121 3300025914 Ga0207671_10129271 Ga0207671_101292712 316
122 3300025919 Ga0207657_10002134 Ga0207657_1000213415 316
123 3300025920 Ga0207649_10008085 Ga0207649_100080853 316
124 3300025924 Ga0207694_10020986 Ga0207694_100209864 316
125 3300025924 Ga0207694_10208077 Ga0207694_102080772 316
126 3300025929 Ga0207664_10000109 Ga0207664_1000010955 316
127 3300025929 Ga0207664_10008488 Ga0207664_100084882 316
128 3300025932 Ga0207690_10000252 Ga0207690_1000025227 316
129 3300025933 Ga0207706_10017085 Ga0207706_100170854 316
130 3300025934 Ga0207686_10052756 Ga0207686_100527561 316
131 3300025949 Ga0207667_10021608 Ga0207667_100216083 316
132 3300025949 Ga0207667_10098768 Ga0207667_100987682 316
133 3300025981 Ga0207640_10008383 Ga0207640_100083835 316
134 3300026035 Ga0207703_10023530 Ga0207703_100235305 316
135 3300026041 Ga0207639_10318962 Ga0207639_103189621 316
136 3300026067 Ga0207678_10000898 Ga0207678_1000089815 316
137 3300026078 Ga0207702_10000104 Ga0207702_1000010417 316
138 3300026116 Ga0207674_10048274 Ga0207674_100482744 316
139 3300037068 Ga0373925_0023415 Ga0373925_0023415_2079_3047 316
140 3300037312 Ga0395899_0049747 Ga0395899_0049747_1654_2613 316
141 3300037466 Ga0395898_0083952 Ga0395898_0083952_1408_2367 316
142 3300038443 Ga0395901_0002860 Ga0395901_0002860_4805_5764 316
143 3300046674 Ga0495588_0131765 Ga0495588_0131765_22_1083 316
144 3300048915 Ga0496112_0225420 Ga0496112_0225420_493_1452 316
145 3300048917 Ga0496114_0230074 Ga0496114_0230074_106_1065 316
146 3300048918 Ga0496115_0060327 Ga0496115_0060327_268_1227 316
147 3300049569 Ga0501032_0004233 Ga0501032_0004233_6746_7705 316
148 3300049570 Ga0501033_0235098 Ga0501033_0235098_309_1268 316
149 3300049574 Ga0501038_0285648 Ga0501038_0285648_275_1237 316
150 3300049580 Ga0501046_0040063 Ga0501046_0040063_2446_3405 316
151 3300001979 JGI24740J21852_10030729 JGI24740J21852_100307292 317
152 3300001990 JGI24737J22298_10002950 JGI24737J22298_100029506 317
153 3300002705 JGI25156J39149_1006742 JGI25156J39149_10067422 317
154 3300002737 JGI25162J39368_1000048 JGI25162J39368_100004890 317
155 3300002741 JGI25157J39369_1000219 JGI25157J39369_100021938 317
156 3300002741 JGI25157J39369_1000371 JGI25157J39369_100037113 317
157 3300002771 JGI25163J39215_1000404 JGI25163J39215_10004042 317
158 3300002772 JGI25164J39214_1000151 JGI25164J39214_100015138 317
159 3300003214 JGI25165J46597_1000009 JGI25165J46597_1000009287 317
160 3300003215 JGI25153J46596_10017796 JGI25153J46596_100177962 317
161 3300003316 rootH1_10066809 rootH1_100668094 317
162 3300003316 rootH1_10069221 rootH1_100692212 317
163 3300003322 rootL2_10024973 rootL2_100249732 317
164 3300003323 rootH1_10263868 rootH1_102638682 317
165 3300003751 Ga0055538_1000774 Ga0055538_10007746 317
166 3300003761 Ga0055535_1000016 Ga0055535_1000016140 317
167 3300003762 Ga0055542_1000045 Ga0055542_100004589 317
168 3300003763 Ga0055529_1000020 Ga0055529_1000020103 317
169 3300003794 Ga0055531_10003321 Ga0055531_100033215 317
170 3300005262 Ga0065165_1002313 Ga0065165_10023133 317
171 3300005327 Ga0070658_10000002 Ga0070658_1000000280 317
172 3300005339 Ga0070660_100000379 Ga0070660_10000037911 317
173 3300005539 Ga0068853_100012423 Ga0068853_1000124232 317
174 3300005563 Ga0068855_100059070 Ga0068855_1000590702 317
175 3300005577 Ga0068857_100001826 Ga0068857_10000182615 317
176 3300005578 Ga0068854_100000218 Ga0068854_1000002183 317
177 3300005578 Ga0068854_100020875 Ga0068854_1000208755 317
178 3300005616 Ga0068852_100119824 Ga0068852_1001198243 317
179 3300005834 Ga0068851_10010458 Ga0068851_100104585 317
180 3300005842 Ga0068858_100081511 Ga0068858_1000815113 317
181 3300009093 Ga0105240_10000162 Ga0105240_1000016264 317
182 3300009093 Ga0105240_10000884 Ga0105240_1000088423 317
183 3300009093 Ga0105240_10009942 Ga0105240_1000994211 317
184 3300009093 Ga0105240_10097046 Ga0105240_100970463 317
185 3300009545 Ga0105237_10000436 Ga0105237_1000043655 317
186 3300010375 Ga0105239_10000050 Ga0105239_1000005093 317
187 3300010375 Ga0105239_10126021 Ga0105239_101260212 317
188 3300012500 Ga0157314_1000481 Ga0157314_10004814 317
189 3300020080 Ga0206350_10904467 Ga0206350_109044672 317
190 3300022467 Ga0224712_10000382 Ga0224712_100003825 317
191 3300025207 Ga0209760_100497 Ga0209760_1004973 317
192 3300025224 Ga0209784_100013 Ga0209784_100013215 317
193 3300025228 Ga0209672_103437 Ga0209672_1034373 317
194 3300025231 Ga0207427_100030 Ga0207427_10003015 317
195 3300025233 Ga0209437_100012 Ga0209437_100012466 317
196 3300025242 Ga0209258_100019 Ga0209258_100019323 317
197 3300025246 Ga0209646_1000549 Ga0209646_100054912 317
198 3300025250 Ga0209026_1000015 Ga0209026_1000015110 317
199 3300025254 Ga0209148_1000001 Ga0209148_10000011977 317
200 3300025256 Ga0209759_1000425 Ga0209759_100042538 317
201 3300025258 Ga0209129_1003465 Ga0209129_10034654 317
202 3300025261 Ga0209233_1000002 Ga0209233_1000002323 317
203 3300025272 Ga0209455_1000027 Ga0209455_1000027222 317
204 3300025297 Ga0209758_1001407 Ga0209758_100140710 317
205 3300025297 Ga0209758_1013988 Ga0209758_10139882 317
206 3300025304 Ga0209257_1000285 Ga0209257_100028566 317
207 3300025321 Ga0207656_10010383 Ga0207656_100103833 317
208 3300025904 Ga0207647_10028033 Ga0207647_100280333 317
209 3300025909 Ga0207705_10000005 Ga0207705_10000005527 317
210 3300025913 Ga0207695_10000198 Ga0207695_1000019885 317
211 3300025913 Ga0207695_10002325 Ga0207695_100023256 317
212 3300025913 Ga0207695_10002464 Ga0207695_100024642 317
213 3300025913 Ga0207695_10009730 Ga0207695_1000973011 317
214 3300025913 Ga0207695_10031434 Ga0207695_100314342 317
215 3300025914 Ga0207671_10000422 Ga0207671_100004222 317
216 3300025919 Ga0207657_10000749 Ga0207657_1000074911 317
217 3300025949 Ga0207667_10000752 Ga0207667_1000075226 317
218 3300025949 Ga0207667_10002209 Ga0207667_100022092 317
219 3300025981 Ga0207640_10000275 Ga0207640_1000027523 317
220 3300025981 Ga0207640_10000512 Ga0207640_1000051222 317
221 3300026116 Ga0207674_10001200 Ga0207674_1000120030 317
222 3300031852 Ga0307410_10037525 Ga0307410_100375253 317
223 3300032004 Ga0307414_10417831 Ga0307414_104178311 317
224 3300037312 Ga0395899_0004139 Ga0395899_0004139_7928_8908 317
225 3300037418 Ga0395900_0005663 Ga0395900_0005663_2698_3666 317
226 3300042876 Ga0451577_0073453 Ga0451577_0073453_691_1650 317
227 3300044658 Ga0466972_0073173 Ga0466972_0073173_248_1201 317
228 3300044672 Ga0466982_0000007 Ga0466982_0000007_249723_250676 317
229 3300044683 Ga0466965_0069067 Ga0466965_0069067_537_1490 317
230 3300044684 Ga0466966_0002555 Ga0466966_0002555_248_1201 317
231 3300044719 Ga0466971_0000694 Ga0466971_0000694_3792_4745 317
232 3300044842 Ga0466957_0128671 Ga0466957_0128671_538_1491 317
233 3300044901 Ga0466960_0051348 Ga0466960_0051348_834_1787 317
234 3300045051 Ga0451576_0001672 Ga0451576_0001672_2708_3667 317
235 3300046536 Ga0495587_0001319 Ga0495587_0001319_10439_11392 317
236 3300048904 Ga0496101_0007629 Ga0496101_0007629_3445_4404 317
237 3300048908 Ga0496105_0014752 Ga0496105_0014752_3121_4080 317
238 3300048909 Ga0496106_0032292 Ga0496106_0032292_812_1771 317
239 3300048920 Ga0496117_0036716 Ga0496117_0036716_2452_3411 317
240 3300048921 Ga0496118_0000839 Ga0496118_0000839_45474_46433 317
241 3300048921 Ga0496118_0004745 Ga0496118_0004745_12498_13457 317
242 3300048922 Ga0496119_0000109 Ga0496119_0000109_8055_9014 317
243 3300048923 Ga0496120_0000150 Ga0496120_0000150_8056_9015 317
244 3300048924 Ga0496121_0000013 Ga0496121_0000013_175723_176682 317
245 3300048924 Ga0496121_0011320 Ga0496121_0011320_1040_1993 317
246 3300048924 Ga0496121_0031077 Ga0496121_0031077_210_1169 317
247 3300048928 Ga0496125_0000766 Ga0496125_0000766_51170_52123 317
248 3300048929 Ga0496126_0000240 Ga0496126_0000240_50539_51498 317
249 3300049583 Ga0501067_0020113 Ga0501067_0020113_1627_2649 317
250 3300049589 Ga0501073_0001337 Ga0501073_0001337_14360_15382 317
251 3300049593 Ga0501077_0080597 Ga0501077_0080597_518_1540 317
252 3300049742 Ga0501080_0037374 Ga0501080_0037374_774_1796 317
253 3300049744 Ga0501083_0189800 Ga0501083_0189800_131_1153 317
254 3300049778 Ga0501282_000005 Ga0501282_000005_19810_20772 317
255 3300049822 Ga0501035_0080487 Ga0501035_0080487_1338_2291 317
256 3300049823 Ga0501044_0258959 Ga0501044_0258959_493_1446 317
257 3300053119 Ga0500595_000483 Ga0500595_000483_1271_2245 317
258 3300053146 Ga0500588_0014009 Ga0500588_0014009_27_998 317
259 3300054114 Ga0501084_0239187 Ga0501084_0239187_316_1338 317
260 3300059503 Ga0587080_002231 Ga0587080_002231_207_1160 317
261 3300060353 Ga0501082_0005945 Ga0501082_0005945_240_1262 317

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01408

GFO_IDH_MocA

Oxidoreductase family, NAD-binding Rossmann fold

39

166

0.92

PF02894

GFO_IDH_MocA_C

Oxidoreductase family, C-terminal alpha/beta domain

190

279

0.91

PF22725

GFO_IDH_MocA_C3

GFO/IDH/MocA C-terminal domain

178

284

0.72

Structural Annotation

Top 5 Hits

ID Description Score Start End
3oa2-assembly1.cif.gz_A crystal structure of the wlba (wbpb) dehydrogenase from pseudomonas aeruginosa in complex with nad at 1.5 angstrom resolution 0.9792 1 312
3oa2-assembly1.cif.gz_B crystal structure of the wlba (wbpb) dehydrogenase from pseudomonas aeruginosa in complex with nad at 1.5 angstrom resolution 0.9758 1 313
3oa2-assembly1.cif.gz_D crystal structure of the wlba (wbpb) dehydrogenase from pseudomonas aeruginosa in complex with nad at 1.5 angstrom resolution 0.9732 1 311
3oa2-assembly1.cif.gz_A crystal structure of the wlba (wbpb) dehydrogenase from pseudomonas aeruginosa in complex with nad at 1.5 angstrom resolution 0.9729 1 312
3oa2-assembly1.cif.gz_C crystal structure of the wlba (wbpb) dehydrogenase from pseudomonas aeruginosa in complex with nad at 1.5 angstrom resolution 0.9712 1 311
ID Description Score Start End Superfamily
3o9zC01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9721 1 129 3.40.50.720
3oa2D02 Alpha Beta;2-Layer Sandwich;Dihydrodipicolinate Reductase; domain 2;Dihydrodipicolinate Reductase; domain 2 0.9564 135 311 3.30.360.10
3o9zC01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9429 1 129 3.40.50.720
3oa2D02 Alpha Beta;2-Layer Sandwich;Dihydrodipicolinate Reductase; domain 2;Dihydrodipicolinate Reductase; domain 2 0.9341 135 311 3.30.360.10
3o9zC02 Alpha Beta;2-Layer Sandwich;Dihydrodipicolinate Reductase; domain 2;Dihydrodipicolinate Reductase; domain 2 0.9245 133 312 3.30.360.10
ID Description Score Start End GO Terms
AF-A0A497DKF8-F1-model_v4 Oxidoreductase 0.9578 1 148 GO:0000166
AF-A0A6N7ZQW5-F1-model_v4 Gfo/Idh/MocA family oxidoreductase 0.9572 1 312 GO:0000166
AF-A0A497DKF8-F1-model_v4 Oxidoreductase 0.8932 1 148 GO:0000166
AF-A0A3C0ITL4-F1-model_v4 Oxidoreductase 0.8865 1 146 GO:0000166
AF-A0A7V6AK52-F1-model_v4 Gfo/Idh/MocA family oxidoreductase 0.8682 2 146 GO:0000166

Feature Viewer

pLDDT pTM Quality
93.12 0.9 High
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Predicted Structure (AlphaFold2)

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