F370375

General Info

Members Datasets Scaffolds Average Seq Length
261 182 216 414

Family's Representative Sequence

Representative Sequence 3300025246|Ga0209646_1000224|Ga0209646_100022424
Length 455
Sequence MTSRARILGGFLGEFLGSVRDHRYPSGVPSLGELIAPRRLGRDFRWLLASSWTSNIGDGVALAAAPLLIASMTSSPILVASGAILQFLPWLLFGLHAGAIADRFDRRRLVMTANAVRAVVLAALCVFLMTGTANIGIVLAVAFLYGTAEVFVDTAGSTLLPMLVKPADLGIGNARLQAGYLVANQFAGPPLGAFLFAAGSAWPFLVEVLCVTLAIVLISRMARTPVPPRETETHPPVHTDIAEGLRWLWRNPPVRMLVLIILVFNVTWAPPWGVLVLYATEHLQMGPVGYGALTTASAAGGIVATLSFGWLERHVSFATLMRIVLSLEVLMHLAFALTTTGTVALVIMFFFGAYAFVWGTISTTVRQRLVPASLQGRVASVNMVGVFGGMIVGQALGGVIAQTWGLTAPWWFAFGGAAITLLLVWKPISHIVSAKPVAETGPEDVEPEGQSANEP

Samples

Sample ID Description Type Environment
1 2643221542 Microbacterium sp. Root1433D1 Isolate Unclassified
2 2643221553 Microbacterium sp. Root553 Isolate Unclassified
3 2643221566 Microbacterium sp. Root166 Isolate Unclassified
4 2643221575 Microbacterium sp. Root61 Isolate Unclassified
5 2643221597 Microbacterium sp. Root180 Isolate Unclassified
6 2643221615 Nocardioides sp. Root224 Isolate Unclassified
7 2643221630 Microbacterium sp. Root322 Isolate Unclassified
8 2643221641 Nocardioides sp. Root122 Isolate Unclassified
9 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
10 2643221724 Microbacterium sp. Root280D1 Isolate Unclassified
11 2728369380 Microbacterium sp. 1.5R Isolate Rhizosphere
12 2738541272 Promicromonospora sp. AC04 Isolate Unclassified
13 2738543027 Promicromonospora sp. CF082 Isolate Unclassified
14 2739367654 Promicromonospora sp. YR516 Isolate Unclassified
15 2739367898 Nocardioides sp. CF479 Isolate Unclassified
16 2747842429 Microbacterium sp. WCS2014-259 Isolate Unclassified
17 2758568522 Promicromonospora thailandica SAI-039 Isolate Unclassified
18 2758568621 Promicromonospora sukumoe SAI-064 Isolate Unclassified
19 2773857763 Microbacterium sp. SAI-030 Isolate Unclassified
20 2808606306 Microbacterium sp. SLBN-146 Isolate Unclassified
21 2808606368 Microbacterium sp. SLBN-1 Isolate Unclassified
22 2808606394 Promicromonospora sp. C35 Isolate Unclassified
23 2808606447 Microbacterium sp. HAR-UPW-R2A-48 Isolate Unclassified
24 2811994872 Microbacterium sp. MU4Y-5-1 Isolate Unclassified
25 2821268502 Microbacterium sp. YT0620BN Isolate Unclassified
26 2833709550 Microbacterium sp. 3290 Isolate Rhizosphere
27 2852632344 Microbacterium sp. AK009 Isolate Rhizosphere
28 2852646457 Microbacterium sp. AK031 Isolate Rhizosphere
29 2852663356 Microbacterium sp. JAI119 Isolate Rhizosphere
30 2857720070 Microbacterium sp. R-72113 Isolate Unclassified
31 2857723135 Microbacterium sp. R-72356 Isolate Unclassified
32 2857733635 Salinibacterium sp. R-73062 Isolate Unclassified
33 2883821847 Microlunatus elymi KUDC0627 Isolate Rhizosphere
34 2919395869 Microbacterium resistens 2980 Isolate Unclassified
35 2928090899 Microbacterium sp. 1262 Isolate Rhizosphere
36 2945968032 Microbacterium murale W2I7 Isolate Rhizosphere
37 2946033335 Microbacterium sp. W4I4 Isolate Rhizosphere
38 2946041624 Microbacterium natoriense W4I9-1 Isolate Rhizosphere
39 2946080515 Microbacterium sp. W4I20 Isolate Rhizosphere
40 2984580707 Microbacterium paludicola SORGH_AS919 Isolate Aerial Root
41 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
42 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
43 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
44 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
45 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
46 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
47 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
48 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
49 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
50 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
51 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
52 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
53 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
54 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
55 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
56 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
57 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
58 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
59 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
60 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
61 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
62 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
63 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
64 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
65 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
66 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
67 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
68 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
69 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
70 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
71 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
72 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
73 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
74 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
75 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
76 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
77 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
78 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
79 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
80 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
81 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
82 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
83 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
84 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
85 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
86 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
108 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
109 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
110 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
111 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
112 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
113 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
114 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
115 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
116 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
117 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
118 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
119 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
120 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
121 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
122 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
123 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
124 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
125 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
126 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
127 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
128 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
129 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
130 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
131 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
132 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
139 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
140 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
143 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
147 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
148 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
149 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
150 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
151 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
152 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
153 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
154 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
155 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
156 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
157 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
158 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
159 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
160 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
161 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
162 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
163 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
164 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
165 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
166 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
167 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
168 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
169 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
170 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
171 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
172 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
173 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
174 3300053155 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 endosphere Metagenome Endosphere
175 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
176 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
177 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
178 8004182704 Microbacterium paraoxydans ku-mp Isolate Unclassified
179 8004212874 Microbacterium sp. NC79 Isolate Rhizosphere
180 8045830549 Microbacterium yannicii DSM 23203 Isolate Unclassified
181 8054609563 Nocardioides astragali CGMCC 4.7327 Isolate Nodule
182 8056579771 Promicromonospora iranensis UTMC 00792 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 81.99
Metatranscriptomes 0.77
Isolates 17.24

Biome Distribution

Category Percentage (%)
Aerial Root 0.38
Bulb 0
Endosphere 8.81
Nodule 0.38
Rhizoplane 3.45
Rhizosphere 67.82
Stem 0
Stem Tuber 0
Unclassified 19.16

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0006562J51391_1138373 3300003578 Bacteria 10808
2 Ga0006562J51391_1138374 3300003578 Bacteria 10070
3 Ga0070658_10019857 3300005327 Bacteria 5382
4 Ga0070658_10080011 3300005327 Bacteria 2683
5 Ga0070683_100149093 3300005329 Bacteria 2217
6 Ga0070683_100269019 3300005329 Bacteria 1621
7 Ga0070682_100042625 3300005337 Bacteria 2803
8 Ga0068868_100023252 3300005338 Bacteria 4689
9 Ga0070660_100018156 3300005339 Bacteria 5134
10 Ga0070660_100020537 3300005339 Bacteria 4855
11 Ga0070661_100102697 3300005344 Bacteria 2128
12 Ga0070685_10044025 3300005466 Bacteria 2554
13 Ga0070707_100064879 3300005468 Bacteria 3507
14 Ga0070698_100000980 3300005471 Bacteria 31367
15 Ga0070684_100020067 3300005535 Bacteria 5542
16 Ga0068853_100207967 3300005539 Bacteria 1783
17 Ga0070672_100030883 3300005543 Bacteria 4029
18 Ga0070665_100008262 3300005548 Bacteria 10526
19 Ga0068855_100001864 3300005563 Bacteria 26208
20 Ga0068857_100004621 3300005577 Bacteria 11665
21 Ga0068857_100047993 3300005577 Bacteria 3791
22 Ga0068856_100258722 3300005614 Bacteria 1756
23 Ga0068852_100005025 3300005616 Bacteria 9403
24 Ga0068852_100025142 3300005616 Bacteria 4821
25 Ga0068852_100027910 3300005616 Bacteria 4609
26 Ga0068859_100122171 3300005617 Bacteria 2671
27 Ga0068851_10000009 3300005834 Bacteria 217844
28 Ga0068863_100066896 3300005841 Bacteria 3399
29 Ga0068858_100000095 3300005842 Bacteria 92510
30 Ga0068858_100051220 3300005842 Bacteria 3820
31 Ga0075365_10004574 3300006038 Bacteria 7357
32 Ga0075365_10015267 3300006038 Bacteria 4641
33 Ga0075365_10038219 3300006038 Bacteria 3118
34 Ga0075368_10010775 3300006042 Bacteria 3313
35 Ga0075364_10035610 3300006051 Bacteria 3217
36 Ga0075364_10094597 3300006051 Bacteria 1986
37 Ga0075362_10035820 3300006177 Bacteria 2168
38 Ga0075367_10010736 3300006178 Bacteria 4823
39 Ga0075367_10025449 3300006178 Bacteria 3348
40 Ga0075369_10060096 3300006186 Bacteria 1657
41 Ga0068865_100016867 3300006881 Bacteria 4685
42 Ga0068865_100083016 3300006881 Bacteria 2305
43 Ga0097620_100122172 3300006931 Bacteria 2671
44 Ga0105240_10002826 3300009093 Bacteria 27460
45 Ga0105245_10021266 3300009098 Bacteria 5688
46 Ga0105245_10021301 3300009098 Bacteria 5684
47 Ga0105243_10223483 3300009148 Bacteria 1666
48 Ga0105241_10000101 3300009174 Bacteria 62472
49 Ga0105248_10065052 3300009177 Bacteria 4093
50 Ga0105237_10000604 3300009545 Bacteria 50042
51 Ga0105237_10047280 3300009545 Bacteria 4326
52 Ga0105239_10022564 3300010375 Bacteria 6940
53 Ga0105246_10000453 3300011119 Bacteria 22003
54 Ga0105246_10054448 3300011119 Bacteria 2757
55 Ga0157369_10025676 3300013105 Bacteria 6537
56 Ga0171462_1004 3300013250 Bacteria 678877
57 Ga0157372_10036993 3300013307 Bacteria 5381
58 Ga0157375_10019157 3300013308 Bacteria 6217
59 Ga0163163_10036572 3300014325 Bacteria 4771
60 Ga0157377_10112279 3300014745 Bacteria 1640
61 Ga0209646_1000224 3300025246 Bacteria 60259
62 Ga0207656_10000001 3300025321 Bacteria 1323684
63 Ga0207656_10000003 3300025321 Bacteria 771644
64 Ga0207656_10000004 3300025321 Bacteria 632320
65 Ga0207688_10010145 3300025901 Bacteria 5124
66 Ga0207705_10041971 3300025909 Bacteria 3283
67 Ga0207654_10000003 3300025911 Bacteria 1030378
68 Ga0207695_10009711 3300025913 Bacteria 11848
69 Ga0207695_10017437 3300025913 Bacteria 8358
70 Ga0207671_10000001 3300025914 Bacteria 1318881
71 Ga0207657_10021520 3300025919 Bacteria 6064
72 Ga0207657_10037271 3300025919 Bacteria 4343
73 Ga0207694_10002718 3300025924 Bacteria 14314
74 Ga0207687_10012444 3300025927 Bacteria 5558
75 Ga0207687_10120367 3300025927 Bacteria 1962
76 Ga0207690_10002675 3300025932 Bacteria 10739
77 Ga0207686_10060457 3300025934 Bacteria 2398
78 Ga0207709_10009719 3300025935 Bacteria 5299
79 Ga0207704_10045825 3300025938 Bacteria 2601
80 Ga0207704_10088458 3300025938 Bacteria 2026
81 Ga0207711_10000289 3300025941 Bacteria 53688
82 Ga0207711_10050340 3300025941 Bacteria 3566
83 Ga0207667_10000678 3300025949 Bacteria 44100
84 Ga0207667_10015392 3300025949 Bacteria 8693
85 Ga0207667_10109290 3300025949 Bacteria 2852
86 Ga0207703_10000026 3300026035 Bacteria 211591
87 Ga0207639_10004459 3300026041 Bacteria 9449
88 Ga0207639_10179102 3300026041 Bacteria 1802
89 Ga0207676_10243344 3300026095 Bacteria 1615
90 Ga0207674_10001233 3300026116 Bacteria 33392
91 Ga0207674_10103757 3300026116 Bacteria 2822
92 Ga0207698_10000581 3300026142 Bacteria 21388
93 Ga0207698_10000757 3300026142 Bacteria 18760
94 Ga0207698_10195895 3300026142 Bacteria 1805
95 Ga0268266_10005397 3300028379 Bacteria 11934
96 Ga0307515_10060993 3300028794 Bacteria 5363
97 Ga0316578_10022278 3300031728 Bacteria 3530
98 Ga0307406_10000034 3300031901 Bacteria 83739
99 Ga0307406_10000172 3300031901 Bacteria 38746
100 Ga0307406_10000624 3300031901 Bacteria 20198
101 Ga0307414_10021905 3300032004 Bacteria 4022
102 Ga0307415_100065818 3300032126 Bacteria 2527
103 Ga0316584_0018113 3300036712 Bacteria 5077
104 Ga0395901_0185774 3300038443 Bacteria 2180
105 Ga0439465_0016582 3300041413 Bacteria 2298
106 Ga0466970_0000445 3300044765 Bacteria 20295
107 Ga0466970_0025753 3300044765 Bacteria 3082
108 Ga0466957_0032682 3300044842 Bacteria 3117
109 Ga0466958_0081287 3300045836 Bacteria 1994
110 Ga0466967_0129095 3300045976 Bacteria 2345
111 Ga0466967_0164918 3300045976 Bacteria 2081
112 Ga0495627_000580 3300046453 Bacteria 29371
113 Ga0496103_0062173 3300048906 Bacteria 2324
114 Ga0496109_0049406 3300048912 Bacteria 3829
115 Ga0496109_0173204 3300048912 Bacteria 2025
116 Ga0496110_0017732 3300048913 Bacteria 5957
117 Ga0496110_0056858 3300048913 Bacteria 3443
118 Ga0496111_0003335 3300048914 Bacteria 9928
119 Ga0496111_0098686 3300048914 Bacteria 2145
120 Ga0496114_0041051 3300048917 Bacteria 3834
121 Ga0496114_0047702 3300048917 Bacteria 3563
122 Ga0496117_0001847 3300048920 Bacteria 28576
123 Ga0496118_0024160 3300048921 Bacteria 5254
124 Ga0496119_0000831 3300048922 Bacteria 41136
125 Ga0496119_0061534 3300048922 Bacteria 2241
126 Ga0496119_0062329 3300048922 Bacteria 2222
127 Ga0496120_0048658 3300048923 Bacteria 2438
128 Ga0496122_0016503 3300048925 Bacteria 6980
129 Ga0496122_0067035 3300048925 Bacteria 2588
130 Ga0496122_0099369 3300048925 Bacteria 1951
131 Ga0496125_0000097 3300048928 Bacteria 204607
132 Ga0496125_0011355 3300048928 Bacteria 8917
133 Ga0496125_0026578 3300048928 Bacteria 5269
134 Ga0496125_0121226 3300048928 Bacteria 1865
135 Ga0496126_0007230 3300048929 Bacteria 12213
136 Ga0496126_0067218 3300048929 Bacteria 3203
137 Ga0496126_0091454 3300048929 Bacteria 2675
138 Ga0501031_0001221 3300049568 Bacteria 15720
139 Ga0501031_0005982 3300049568 Bacteria 7940
140 Ga0501031_0014423 3300049568 Bacteria 5137
141 Ga0501032_0001035 3300049569 Bacteria 22326
142 Ga0501033_0002220 3300049570 Bacteria 16695
143 Ga0501034_0015373 3300049571 Bacteria 7865
144 Ga0501034_0109217 3300049571 Bacteria 2757
145 Ga0501034_0110085 3300049571 Bacteria 2745
146 Ga0501036_0002307 3300049572 Bacteria 14907
147 Ga0501036_0011905 3300049572 Bacteria 7211
148 Ga0501036_0019419 3300049572 Bacteria 5706
149 Ga0501037_0001659 3300049573 Bacteria 16196
150 Ga0501038_0001216 3300049574 Bacteria 23329
151 Ga0501038_0126365 3300049574 Bacteria 2104
152 Ga0501038_0185347 3300049574 Bacteria 1677
153 Ga0501039_0000737 3300049575 Bacteria 23615
154 Ga0501039_0003176 3300049575 Bacteria 12293
155 Ga0501040_0017074 3300049576 Bacteria 4815
156 Ga0501040_0163642 3300049576 Bacteria 1573
157 Ga0501041_0046947 3300049577 Bacteria 2628
158 Ga0501042_0006605 3300049578 Bacteria 7545
159 Ga0501042_0151137 3300049578 Bacteria 1674
160 Ga0501043_0002770 3300049579 Bacteria 14660
161 Ga0501046_0002359 3300049580 Bacteria 17768
162 Ga0501047_0003465 3300049581 Bacteria 14904
163 Ga0501048_0000126 3300049582 Bacteria 44703
164 Ga0501048_0017876 3300049582 Bacteria 5216
165 Ga0501048_0059136 3300049582 Bacteria 2716
166 Ga0501067_0001282 3300049583 Bacteria 13634
167 Ga0501067_0001527 3300049583 Bacteria 12612
168 Ga0501068_0017868 3300049584 Bacteria 4105
169 Ga0501068_0049081 3300049584 Bacteria 2549
170 Ga0501069_0002987 3300049585 Bacteria 8711
171 Ga0501069_0018373 3300049585 Bacteria 3773
172 Ga0501070_0001995 3300049586 Bacteria 17939
173 Ga0501070_0008068 3300049586 Bacteria 8911
174 Ga0501070_0033508 3300049586 Bacteria 4299
175 Ga0501070_0171190 3300049586 Bacteria 1789
176 Ga0501071_0037326 3300049587 Bacteria 3469
177 Ga0501071_0163700 3300049587 Bacteria 1663
178 Ga0501071_0226284 3300049587 Bacteria 1409
179 Ga0501072_0012701 3300049588 Bacteria 6440
180 Ga0501072_0018263 3300049588 Bacteria 5396
181 Ga0501073_0002344 3300049589 Bacteria 14170
182 Ga0501073_0004448 3300049589 Bacteria 10530
183 Ga0501074_0000341 3300049590 Bacteria 27259
184 Ga0501074_0006111 3300049590 Bacteria 8696
185 Ga0501074_0018567 3300049590 Bacteria 5051
186 Ga0501074_0134046 3300049590 Bacteria 1772
187 Ga0501075_0010035 3300049591 Bacteria 6645
188 Ga0501076_0175327 3300049592 Bacteria 1747
189 Ga0501077_0001798 3300049593 Bacteria 12966
190 Ga0501079_0073099 3300049741 Bacteria 2651
191 Ga0501080_0001635 3300049742 Bacteria 19064
192 Ga0501081_0065351 3300049743 Bacteria 2528
193 Ga0501035_0001521 3300049822 Bacteria 23695
194 Ga0501035_0099286 3300049822 Bacteria 2556
195 Ga0501035_0169587 3300049822 Bacteria 1886
196 Ga0501044_0008418 3300049823 Bacteria 11310
197 Ga0501045_0006638 3300049824 Bacteria 8021
198 nmdc:mga03683_30369_c1 3300050489 Bacteria 2162
199 nmdc:mga03n38_28404_c1 3300050490 Bacteria 2331
200 nmdc:mga00v17_186380_c1 3300050491 Bacteria 1339
201 nmdc:mga00v17_48234_c1 3300050491 Bacteria 2581
202 nmdc:mga0yw44_13808_c1 3300050492 Bacteria 4266
203 nmdc:mga0yw44_810_c1 3300050492 Bacteria 10730
204 nmdc:mga06z11_16097_c1 3300050494 Bacteria 3358
205 Ga0500635_0013846 3300053080 Bacteria 2351
206 Ga0500651_0046501 3300053093 Bacteria 2730
207 Ga0500593_000571 3300053117 Bacteria 14163
208 Ga0500568_0049623 3300053139 Bacteria 1655
209 Ga0500590_003972 3300053148 Bacteria 6910
210 Ga0500620_000053 3300053155 Bacteria 21071
211 Ga0501084_0000570 3300054114 Bacteria 28154
212 Ga0501084_0017697 3300054114 Bacteria 5929
213 Ga0501084_0053500 3300054114 Bacteria 3377
214 Ga0501084_0085579 3300054114 Bacteria 2647
215 Ga0501082_0021568 3300060353 Bacteria 5555
216 Ga0530510_0011572 3300061734 Bacteria 6192

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300048920 Ga0496117_0001847 Ga0496117_0001847_6874_8094 345
2 iso_pu_bacteria 2643221553 2643786644 349
3 3300048925 Ga0496122_0067035 Ga0496122_0067035_928_2169 352
4 3300048928 Ga0496125_0026578 Ga0496125_0026578_1255_2496 352
5 3300048929 Ga0496126_0091454 Ga0496126_0091454_1048_2289 358
6 3300049587 Ga0501071_0226284 Ga0501071_0226284_15_1112 359
7 3300048929 Ga0496126_0007230 Ga0496126_0007230_1011_2270 361
8 3300048922 Ga0496119_0061534 Ga0496119_0061534_510_1847 370
9 3300048925 Ga0496122_0016503 Ga0496122_0016503_3925_5277 370
10 3300048929 Ga0496126_0067218 Ga0496126_0067218_1460_2782 370
11 3300038443 Ga0395901_0185774 Ga0395901_0185774_214_1407 373
12 3300048928 Ga0496125_0011355 Ga0496125_0011355_854_2128 374
13 3300006038 Ga0075365_10038219 Ga0075365_100382193 377
14 3300006042 Ga0075368_10010775 Ga0075368_100107752 377
15 3300006177 Ga0075362_10035820 Ga0075362_100358202 377
16 3300005539 Ga0068853_100207967 Ga0068853_1002079672 378
17 3300006038 Ga0075365_10004574 Ga0075365_100045749 378
18 3300026041 Ga0207639_10179102 Ga0207639_101791022 378
19 3300011119 Ga0105246_10054448 Ga0105246_100544482 379
20 3300049571 Ga0501034_0109217 Ga0501034_0109217_862_2049 380
21 3300049822 Ga0501035_0099286 Ga0501035_0099286_659_1894 380
22 3300025924 Ga0207694_10002718 Ga0207694_1000271812 382
23 3300048928 Ga0496125_0121226 Ga0496125_0121226_183_1433 383
24 3300049568 Ga0501031_0014423 Ga0501031_0014423_2404_3648 383
25 3300049572 Ga0501036_0019419 Ga0501036_0019419_1004_2248 383
26 3300049576 Ga0501040_0163642 Ga0501040_0163642_37_1281 383
27 3300049582 Ga0501048_0059136 Ga0501048_0059136_155_1399 383
28 3300049592 Ga0501076_0175327 Ga0501076_0175327_286_1530 383
29 3300054114 Ga0501084_0085579 Ga0501084_0085579_854_2098 383
30 3300005543 Ga0070672_100030883 Ga0070672_1000308835 384
31 3300050492 nmdc:mga0yw44_810_c1 nmdc:mga0yw44_810_c1_697_1941 385
32 3300005329 Ga0070683_100149093 Ga0070683_1001490932 391
33 3300031901 Ga0307406_10000624 Ga0307406_100006249 391
34 3300032004 Ga0307414_10021905 Ga0307414_100219052 391
35 3300028794 Ga0307515_10060993 Ga0307515_100609932 394
36 iso_pu_bacteria 2758568522 2760305987 394
37 iso_pu_bacteria 2758568621 2760625537 394
38 iso_pu_bacteria 2946080515 2946084480 394
39 iso_pu_bacteria 8056579771 8056584856 394
40 3300005548 Ga0070665_100008262 Ga0070665_1000082627 395
41 3300028379 Ga0268266_10005397 Ga0268266_100053976 395
42 3300044765 Ga0466970_0025753 Ga0466970_0025753_268_1572 395
43 iso_pu_bacteria 2738541272 2738694743 395
44 iso_pu_bacteria 2738543027 2739325914 395
45 iso_pu_bacteria 2739367654 2739608587 395
46 iso_pu_bacteria 2747842429 2747951702 395
47 iso_pu_bacteria 2808606394 2809030560 395
48 3300005468 Ga0070707_100064879 Ga0070707_1000648793 396
49 3300005471 Ga0070698_100000980 Ga0070698_10000098019 396
50 3300006881 Ga0068865_100083016 Ga0068865_1000830162 396
51 3300009098 Ga0105245_10021301 Ga0105245_100213018 396
52 3300025927 Ga0207687_10120367 Ga0207687_101203672 396
53 3300025934 Ga0207686_10060457 Ga0207686_100604573 396
54 3300025935 Ga0207709_10009719 Ga0207709_100097194 396
55 3300025938 Ga0207704_10088458 Ga0207704_100884582 396
56 3300048925 Ga0496122_0099369 Ga0496122_0099369_654_1904 396
57 3300050492 nmdc:mga0yw44_13808_c1 nmdc:mga0yw44_13808_c1_1512_2744 396
58 iso_pu_bacteria 8004212874 8004213632 396
59 3300048928 Ga0496125_0000097 Ga0496125_0000097_14027_15268 397
60 3300049590 Ga0501074_0134046 Ga0501074_0134046_256_1491 397
61 3300050489 nmdc:mga03683_30369_c1 nmdc:mga03683_30369_c1_490_1725 397
62 3300050491 nmdc:mga00v17_48234_c1 nmdc:mga00v17_48234_c1_1094_2329 397
63 3300031901 Ga0307406_10000172 Ga0307406_1000017225 398
64 3300048921 Ga0496118_0024160 Ga0496118_0024160_3786_5042 398
65 3300005327 Ga0070658_10019857 Ga0070658_100198572 399
66 3300005337 Ga0070682_100042625 Ga0070682_1000426252 399
67 3300005339 Ga0070660_100018156 Ga0070660_1000181567 399
68 3300005577 Ga0068857_100047993 Ga0068857_1000479934 399
69 3300005616 Ga0068852_100005025 Ga0068852_1000050258 399
70 3300005616 Ga0068852_100027910 Ga0068852_1000279105 399
71 3300005834 Ga0068851_10000009 Ga0068851_10000009193 399
72 3300006038 Ga0075365_10015267 Ga0075365_100152674 399
73 3300009148 Ga0105243_10223483 Ga0105243_102234831 399
74 3300009177 Ga0105248_10065052 Ga0105248_100650523 399
75 3300009545 Ga0105237_10000604 Ga0105237_1000060426 399
76 3300010375 Ga0105239_10022564 Ga0105239_100225646 399
77 3300013308 Ga0157375_10019157 Ga0157375_100191574 399
78 3300014745 Ga0157377_10112279 Ga0157377_101122791 399
79 3300025321 Ga0207656_10000001 Ga0207656_10000001337 399
80 3300025321 Ga0207656_10000003 Ga0207656_10000003443 399
81 3300025321 Ga0207656_10000004 Ga0207656_10000004300 399
82 3300025901 Ga0207688_10010145 Ga0207688_100101452 399
83 3300025914 Ga0207671_10000001 Ga0207671_10000001335 399
84 3300025941 Ga0207711_10050340 Ga0207711_100503403 399
85 3300026116 Ga0207674_10001233 Ga0207674_1000123327 399
86 3300026142 Ga0207698_10000581 Ga0207698_100005818 399
87 3300026142 Ga0207698_10000757 Ga0207698_100007572 399
88 3300048906 Ga0496103_0062173 Ga0496103_0062173_719_1969 399
89 3300048912 Ga0496109_0049406 Ga0496109_0049406_721_1971 399
90 3300048913 Ga0496110_0017732 Ga0496110_0017732_1992_3242 399
91 3300048914 Ga0496111_0003335 Ga0496111_0003335_8511_9761 399
92 3300049568 Ga0501031_0001221 Ga0501031_0001221_69_1322 399
93 3300049569 Ga0501032_0001035 Ga0501032_0001035_20731_21984 399
94 3300049570 Ga0501033_0002220 Ga0501033_0002220_152_1405 399
95 3300049571 Ga0501034_0110085 Ga0501034_0110085_1424_2677 399
96 3300049572 Ga0501036_0002307 Ga0501036_0002307_11870_13123 399
97 3300049573 Ga0501037_0001659 Ga0501037_0001659_14524_15777 399
98 3300049574 Ga0501038_0001216 Ga0501038_0001216_15471_16724 399
99 3300049575 Ga0501039_0000737 Ga0501039_0000737_14981_16234 399
100 3300049578 Ga0501042_0151137 Ga0501042_0151137_71_1324 399
101 3300049579 Ga0501043_0002770 Ga0501043_0002770_26_1279 399
102 3300049580 Ga0501046_0002359 Ga0501046_0002359_16280_17533 399
103 3300049581 Ga0501047_0003465 Ga0501047_0003465_13583_14836 399
104 3300049582 Ga0501048_0000126 Ga0501048_0000126_43110_44363 399
105 3300049583 Ga0501067_0001527 Ga0501067_0001527_8036_9289 399
106 3300049584 Ga0501068_0049081 Ga0501068_0049081_486_1739 399
107 3300049585 Ga0501069_0002987 Ga0501069_0002987_2869_4122 399
108 3300049586 Ga0501070_0008068 Ga0501070_0008068_5742_6995 399
109 3300049589 Ga0501073_0004448 Ga0501073_0004448_8447_9700 399
110 3300049590 Ga0501074_0000341 Ga0501074_0000341_13259_14512 399
111 3300049742 Ga0501080_0001635 Ga0501080_0001635_1917_3170 399
112 3300049822 Ga0501035_0001521 Ga0501035_0001521_5395_6648 399
113 3300049823 Ga0501044_0008418 Ga0501044_0008418_9700_10953 399
114 3300053139 Ga0500568_0049623 Ga0500568_0049623_141_1382 399
115 3300054114 Ga0501084_0000570 Ga0501084_0000570_26309_27562 399
116 iso_pu_bacteria 2643221641 2644229116 399
117 iso_pu_bacteria 2643221724 2644681324 399
118 iso_pu_bacteria 2728369380 2730230242 399
119 iso_pu_bacteria 2808606368 2808885328 399
120 iso_pu_bacteria 2857720070 2857720498 399
121 3300025949 Ga0207667_10015392 Ga0207667_1001539211 400
122 iso_pu_bacteria 2643221615 2644089846 400
123 iso_pu_bacteria 2643221657 2644319691 400
124 iso_pu_bacteria 2857733635 2857734722 400
125 iso_pu_bacteria 2883821847 2883823046 400
126 iso_pu_bacteria 2928090899 2928092430 400
127 iso_pu_bacteria 2984580707 2984580808 400
128 3300005327 Ga0070658_10080011 Ga0070658_100800113 401
129 3300005617 Ga0068859_100122171 Ga0068859_1001221712 401
130 3300006178 Ga0075367_10025449 Ga0075367_100254493 401
131 3300006931 Ga0097620_100122172 Ga0097620_1001221722 401
132 3300025909 Ga0207705_10041971 Ga0207705_100419711 401
133 3300031728 Ga0316578_10022278 Ga0316578_100222782 401
134 3300036712 Ga0316584_0018113 Ga0316584_0018113_3104_4345 401
135 3300049568 Ga0501031_0005982 Ga0501031_0005982_3352_4599 401
136 3300049571 Ga0501034_0015373 Ga0501034_0015373_861_2114 401
137 3300049572 Ga0501036_0011905 Ga0501036_0011905_2473_3720 401
138 3300049574 Ga0501038_0126365 Ga0501038_0126365_155_1405 401
139 3300049574 Ga0501038_0185347 Ga0501038_0185347_107_1354 401
140 3300049575 Ga0501039_0003176 Ga0501039_0003176_144_1391 401
141 3300049576 Ga0501040_0017074 Ga0501040_0017074_1395_2642 401
142 3300049577 Ga0501041_0046947 Ga0501041_0046947_276_1523 401
143 3300049578 Ga0501042_0006605 Ga0501042_0006605_2253_3500 401
144 3300049582 Ga0501048_0017876 Ga0501048_0017876_140_1387 401
145 3300049586 Ga0501070_0171190 Ga0501070_0171190_144_1391 401
146 3300049587 Ga0501071_0163700 Ga0501071_0163700_400_1647 401
147 3300049588 Ga0501072_0012701 Ga0501072_0012701_4423_5670 401
148 3300049590 Ga0501074_0006111 Ga0501074_0006111_4347_5594 401
149 3300049591 Ga0501075_0010035 Ga0501075_0010035_2459_3706 401
150 3300049743 Ga0501081_0065351 Ga0501081_0065351_104_1351 401
151 3300049822 Ga0501035_0169587 Ga0501035_0169587_119_1366 401
152 3300049824 Ga0501045_0006638 Ga0501045_0006638_1693_2940 401
153 3300050491 nmdc:mga00v17_186380_c1 nmdc:mga00v17_186380_c1_38_1321 401
154 3300050494 nmdc:mga06z11_16097_c1 nmdc:mga06z11_16097_c1_792_2039 401
155 3300053117 Ga0500593_000571 Ga0500593_000571_4418_5674 401
156 3300054114 Ga0501084_0017697 Ga0501084_0017697_2040_3287 401
157 3300061734 Ga0530510_0011572 Ga0530510_0011572_4573_5820 401
158 iso_pu_bacteria 2919395869 2919396179 401
159 3300046453 Ga0495627_000580 Ga0495627_000580_19376_20632 402
160 3300006051 Ga0075364_10035610 Ga0075364_100356102 403
161 3300006051 Ga0075364_10094597 Ga0075364_100945973 403
162 3300009093 Ga0105240_10002826 Ga0105240_1000282618 403
163 3300009174 Ga0105241_10000101 Ga0105241_1000010131 403
164 3300009545 Ga0105237_10047280 Ga0105237_100472805 403
165 3300025911 Ga0207654_10000003 Ga0207654_10000003646 403
166 3300025913 Ga0207695_10009711 Ga0207695_100097119 403
167 3300031901 Ga0307406_10000034 Ga0307406_100000346 403
168 3300032126 Ga0307415_100065818 Ga0307415_1000658181 403
169 3300045836 Ga0466958_0081287 Ga0466958_0081287_350_1618 403
170 3300048922 Ga0496119_0062329 Ga0496119_0062329_593_1921 403
171 3300048923 Ga0496120_0048658 Ga0496120_0048658_313_1641 403
172 iso_pu_bacteria 2852646457 2852649772 403
173 iso_pu_bacteria 2946033335 2946036872 403
174 iso_pu_bacteria 2946041624 2946044911 403
175 iso_pu_bacteria 8054609563 8054612518 403
176 3300005344 Ga0070661_100102697 Ga0070661_1001026973 404
177 3300005535 Ga0070684_100020067 Ga0070684_1000200673 404
178 3300005577 Ga0068857_100004621 Ga0068857_1000046219 404
179 3300005842 Ga0068858_100051220 Ga0068858_1000512202 404
180 3300006881 Ga0068865_100016867 Ga0068865_1000168675 404
181 3300009098 Ga0105245_10021266 Ga0105245_100212666 404
182 3300011119 Ga0105246_10000453 Ga0105246_100004534 404
183 3300013105 Ga0157369_10025676 Ga0157369_100256764 404
184 3300013307 Ga0157372_10036993 Ga0157372_100369932 404
185 3300014325 Ga0163163_10036572 Ga0163163_100365723 404
186 3300025919 Ga0207657_10037271 Ga0207657_100372712 404
187 3300025927 Ga0207687_10012444 Ga0207687_100124442 404
188 3300025938 Ga0207704_10045825 Ga0207704_100458252 404
189 3300025949 Ga0207667_10109290 Ga0207667_101092901 404
190 3300026095 Ga0207676_10243344 Ga0207676_102433441 404
191 3300026116 Ga0207674_10103757 Ga0207674_101037572 404
192 3300026142 Ga0207698_10195895 Ga0207698_101958951 404
193 3300045976 Ga0466967_0164918 Ga0466967_0164918_523_1788 404
194 3300049583 Ga0501067_0001282 Ga0501067_0001282_2700_3959 404
195 3300049584 Ga0501068_0017868 Ga0501068_0017868_886_2145 404
196 3300049587 Ga0501071_0037326 Ga0501071_0037326_199_1458 404
197 3300049588 Ga0501072_0018263 Ga0501072_0018263_571_1830 404
198 3300049589 Ga0501073_0002344 Ga0501073_0002344_10713_11972 404
199 3300049590 Ga0501074_0018567 Ga0501074_0018567_1093_2352 404
200 3300049593 Ga0501077_0001798 Ga0501077_0001798_2689_3948 404
201 3300049741 Ga0501079_0073099 Ga0501079_0073099_233_1492 404
202 3300054114 Ga0501084_0053500 Ga0501084_0053500_1081_2340 404
203 3300060353 Ga0501082_0021568 Ga0501082_0021568_881_2140 404
204 iso_pu_bacteria 2643221542 2643732235 404
205 iso_pu_bacteria 2643221630 2644171053 404
206 iso_pu_bacteria 2739367898 2740166783 404
207 iso_pu_bacteria 2852663356 2852664419 404
208 iso_pu_bacteria 2945968032 2945968450 404
209 3300049585 Ga0501069_0018373 Ga0501069_0018373_1395_2651 405
210 3300049586 Ga0501070_0033508 Ga0501070_0033508_1232_2488 405
211 iso_pu_bacteria 2643221575 2643886079 405
212 iso_pu_bacteria 8004182704 8004185777 405
213 3300005616 Ga0068852_100025142 Ga0068852_1000251423 406
214 3300053148 Ga0500590_003972 Ga0500590_003972_5638_6885 406
215 3300053155 Ga0500620_000053 Ga0500620_000053_19221_20468 406
216 3300005563 Ga0068855_100001864 Ga0068855_1000018648 407
217 3300005841 Ga0068863_100066896 Ga0068863_1000668963 407
218 3300005842 Ga0068858_100000095 Ga0068858_10000009517 407
219 3300025941 Ga0207711_10000289 Ga0207711_1000028954 407
220 3300025949 Ga0207667_10000678 Ga0207667_1000067814 407
221 3300026035 Ga0207703_10000026 Ga0207703_10000026156 407
222 3300048922 Ga0496119_0000831 Ga0496119_0000831_11489_12778 407
223 3300053080 Ga0500635_0013846 Ga0500635_0013846_782_2044 407
224 iso_pu_bacteria 2643221566 2643849168 407
225 iso_pu_bacteria 2643221597 2643995375 407
226 iso_pu_bacteria 2773857763 2774398903 407
227 iso_pu_bacteria 2808606306 2808630687 407
228 iso_pu_bacteria 2808606447 2809227873 407
229 iso_pu_bacteria 2811994872 2812323825 407
230 iso_pu_bacteria 2821268502 2821270520 407
231 iso_pu_bacteria 2833709550 2833711508 407
232 iso_pu_bacteria 2852632344 2852634631 407
233 iso_pu_bacteria 2857723135 2857724932 407
234 iso_pu_bacteria 8045830549 8045830693 407
235 3300025246 Ga0209646_1000224 Ga0209646_100022424 408
236 3300044765 Ga0466970_0000445 Ga0466970_0000445_10913_12214 408
237 3300005329 Ga0070683_100269019 Ga0070683_1002690191 409
238 3300005614 Ga0068856_100258722 Ga0068856_1002587222 410
239 3300048912 Ga0496109_0173204 Ga0496109_0173204_65_1327 410
240 3300048913 Ga0496110_0056858 Ga0496110_0056858_1189_2451 410
241 3300048914 Ga0496111_0098686 Ga0496111_0098686_52_1314 410
242 3300048917 Ga0496114_0047702 Ga0496114_0047702_2247_3509 410
243 3300005338 Ga0068868_100023252 Ga0068868_1000232523 411
244 3300005339 Ga0070660_100020537 Ga0070660_1000205372 411
245 3300005466 Ga0070685_10044025 Ga0070685_100440252 411
246 3300006178 Ga0075367_10010736 Ga0075367_100107365 411
247 3300006186 Ga0075369_10060096 Ga0075369_100600961 411
248 3300013250 Ga0171462_1004 Ga0171462_1004159 411
249 3300025913 Ga0207695_10017437 Ga0207695_1001743710 411
250 3300025919 Ga0207657_10021520 Ga0207657_100215203 411
251 3300025932 Ga0207690_10002675 Ga0207690_100026759 411
252 3300026041 Ga0207639_10004459 Ga0207639_100044596 411
253 3300041413 Ga0439465_0016582 Ga0439465_0016582_667_1971 411
254 3300044842 Ga0466957_0032682 Ga0466957_0032682_1752_3065 411
255 3300045976 Ga0466967_0129095 Ga0466967_0129095_447_1760 411
256 3300049586 Ga0501070_0001995 Ga0501070_0001995_5451_6785 411
257 3300050490 nmdc:mga03n38_28404_c1 nmdc:mga03n38_28404_c1_205_1467 411
258 3300053093 Ga0500651_0046501 Ga0500651_0046501_42_1319 411
259 3300048917 Ga0496114_0041051 Ga0496114_0041051_1478_2752 412
260 3300003578 Ga0006562J51391_1138373 Ga0006562J51391_11383735 434
261 3300003578 Ga0006562J51391_1138374 Ga0006562J51391_11383747 434

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05977

MFS_3

Transmembrane secretion effector

35

450

0.91

PF07690

MFS_1

Major Facilitator Superfamily

47

394

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
7l17-assembly1.cif.gz_A crystal structure of sugar-bound melibiose permease melb 0.818 36 419
6s7v-assembly1.cif.gz_A lipoteichoic acids flippase ltaa 0.8117 37 416
3o7p-assembly1.cif.gz_A crystal structure of the e.coli fucose:proton symporter, fucp (n162a) 0.8108 31 415
3o7q-assembly1.cif.gz_A crystal structure of a major facilitator superfamily (mfs) transporter, fucp, in the outward conformation 0.8092 31 415
6zgr-assembly2.cif.gz_B crystal structure of a mfs transporter with bound 1-hydroxynaphthalene-2-carboxylic acid at 2.67 angstroem resolution 0.8068 34 423
ID Description Score Start End Superfamily
af_P9WJX9_220_402_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9185 239 413 1.20.1250.20
af_P21503_7_181_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9112 241 409 1.20.1250.20
af_P31436_213_393_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8979 239 409 1.20.1250.20
af_P25744_212_408_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8972 238 417 1.20.1250.20
af_Q4CXU4_14_275_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8936 245 419 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A377G425-F1-model_v4 deleted 0.9111 36 429
AF-A0A4U5W4Z3-F1-model_v4 MFS transporter 0.8981 36 434 GO:0005886
AF-A0A350T4D9-F1-model_v4 Major facilitator superfamily (MFS) profile domain-containing protein 0.898 242 416 GO:0005886
GO:0022857
AF-A0A519L4K1-F1-model_v4 MFS transporter 0.8952 240 419 GO:0016020
GO:0022857
AF-A0A522E846-F1-model_v4 MFS transporter 0.8898 238 413 GO:0016020
GO:0022857

Feature Viewer

pLDDT pTM Quality
84.54 0.83 High
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Predicted Structure (AlphaFold2)

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