F370415

General Info

Members Datasets Scaffolds Average Seq Length
261 145 522 363

Family's Representative Sequence

Representative Sequence 3300028577|Ga0265318_10023204|Ga0265318_100232042
Length 401
Sequence VNSEKRTRVVCGMSGGVDSSATAALLLEQGYEVIGITLKLWPQDCVNRAEDKCCGPQAVTDARAVCHKLDIPYYLIDEAAEFQKHVIQYFADEYKAGRTPNPCVMCNQNLKFGRLIDRARQLGADFIATGHFARIEHLPAPSTNPALVGTSRCDVLAREAAGETIAPLNVAWTAQRAVPTPGRYLLKRGRDLKKDQSYFLFSLRQDQLARALFPLGEKTKSDTREVARHCNLKTADKEESMEICFVPDNNYGGFLQSANLVQKHRGEITDVHGHVLGHHDGIAFYTIGQRKGLGITTPKPVYVVELDAENNRVVVGDESALDRDEFTASNCNWIPFDKLTGPVEVTTKIRYNHPGTPATVTPTGNGSVKVKLHSAQRAITPGQAAVFYQDDLILGGGWICR

Samples

Sample ID Description Type Environment
1 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
2 3300000545 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - CNX_Illumina_Assembled Metagenome Rhizosphere
3 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
4 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
8 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
11 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
14 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
17 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
20 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
21 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
22 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
23 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
24 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
25 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
26 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
27 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
28 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
29 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
30 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
31 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
32 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
35 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
36 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
37 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
38 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
39 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
40 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
41 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
59 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
60 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
61 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
62 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
63 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
64 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
65 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
66 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
67 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
68 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
69 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
70 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
71 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
72 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
73 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
74 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
75 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
76 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
77 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
78 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
79 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
80 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
81 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
82 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
83 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
84 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
85 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
86 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
87 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
88 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
89 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
90 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
91 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
92 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
93 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
94 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
95 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
96 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
97 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
98 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
99 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
100 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
101 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
102 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
103 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
104 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
105 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
106 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
107 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
108 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
109 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
110 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
111 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
112 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
113 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
114 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
115 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
116 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
117 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
118 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
119 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
120 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
121 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
122 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
123 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
124 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
125 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
126 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
127 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
128 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
129 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
130 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
131 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
132 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
133 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
134 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
135 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
136 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
143 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
144 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
145 8007375930 Clostridium sp. YIM B02565 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.62
Metatranscriptomes 0
Isolates 0.38

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 1.92
Rhizoplane 1.15
Rhizosphere 95.79
Stem 0
Stem Tuber 0
Unclassified 13.03

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265318_10023204 3300028577 Bacteria 2474
2 CNXas_1000813 3300000545 Bacteria 2016
3 JGI24737J22298_10007175 3300001990 Bacteria 3772
4 Ga0065704_10080166 3300005289 Bacteria 3997
5 Ga0070658_10047231 3300005327 Bacteria 3484
6 Ga0070683_100023134 3300005329 Bacteria 5556
7 Ga0070666_10149208 3300005335 Unclassified 1631
8 Ga0070680_100027969 3300005336 Bacteria 4520
9 Ga0070689_100011135 3300005340 Bacteria 6436
10 Ga0070689_100029235 3300005340 Bacteria 4169
11 Ga0070687_100135187 3300005343 Bacteria 1428
12 Ga0070659_100014486 3300005366 Bacteria 5893
13 Ga0070714_100000025 3300005435 Bacteria 147717
14 Ga0070711_100002192 3300005439 Bacteria 11087
15 Ga0070694_100001394 3300005444 Bacteria 14127
16 Ga0070681_10161401 3300005458 Bacteria 2165
17 Ga0070706_100000859 3300005467 Bacteria 33463
18 Ga0070706_100078878 3300005467 Bacteria 3048
19 Ga0070698_100179057 3300005471 Bacteria 2058
20 Ga0070679_100052540 3300005530 Bacteria 4058
21 Ga0070679_100065395 3300005530 Bacteria 3625
22 Ga0070679_100213490 3300005530 Bacteria 1892
23 Ga0070697_100168365 3300005536 Bacteria 1853
24 Ga0070686_100018024 3300005544 Unclassified 4137
25 Ga0070704_100001090 3300005549 Bacteria 14087
26 Ga0068855_100062857 3300005563 Bacteria 4334
27 Ga0068855_100129187 3300005563 Bacteria 2887
28 Ga0068855_100157590 3300005563 Bacteria 2579
29 Ga0068856_100000317 3300005614 Bacteria 52949
30 Ga0068856_100016111 3300005614 Bacteria 7225
31 Ga0070702_100226280 3300005615 Bacteria 1254
32 Ga0068859_100002866 3300005617 Bacteria 17499
33 Ga0068863_100064148 3300005841 Unclassified 3474
34 Ga0075428_100206685 3300006844 Bacteria 2122
35 Ga0075428_100296274 3300006844 Bacteria 1739
36 Ga0097620_100002866 3300006931 Bacteria 17499
37 Ga0079104_1000215 3300006946 Bacteria 80891
38 Ga0079104_1001139 3300006946 Bacteria 19347
39 Ga0079104_1007202 3300006946 Bacteria 4073
40 Ga0099795_10040517 3300007788 Bacteria 1654
41 Ga0105240_10046797 3300009093 Bacteria 5478
42 Ga0105240_10047793 3300009093 Bacteria 5412
43 Ga0105240_10157889 3300009093 Bacteria 2696
44 Ga0105240_10256751 3300009093 Bacteria 2018
45 Ga0105240_10594809 3300009093 Bacteria 1219
46 Ga0111539_10117399 3300009094 Bacteria 3119
47 Ga0111539_10194889 3300009094 Bacteria 2363
48 Ga0111539_10418701 3300009094 Bacteria 1560
49 Ga0114129_10118171 3300009147 Bacteria 3652
50 Ga0105242_10006643 3300009176 Bacteria 8921
51 Ga0105242_10284058 3300009176 Unclassified 1504
52 Ga0105238_10010768 3300009551 Bacteria 9187
53 Ga0105238_10028213 3300009551 Bacteria 5718
54 Ga0105238_10098165 3300009551 Bacteria 2913
55 Ga0105239_10056212 3300010375 Bacteria 4317
56 Ga0157370_10038124 3300013104 Bacteria 4651
57 Ga0157375_10000063 3300013308 Bacteria 113258
58 Ga0163163_10000065 3300014325 Bacteria 115460
59 Ga0163163_10172776 3300014325 Bacteria 2208
60 Ga0157376_10104005 3300014969 Unclassified 2487
61 Ga0157376_10290640 3300014969 Bacteria 1543
62 Ga0207705_10054285 3300025909 Bacteria 2888
63 Ga0207684_10003095 3300025910 Bacteria 16415
64 Ga0207654_10014649 3300025911 Bacteria 4054
65 Ga0207695_10105894 3300025913 Bacteria 2799
66 Ga0207663_10009780 3300025916 Bacteria 5076
67 Ga0207662_10154975 3300025918 Bacteria 1460
68 Ga0207652_10027456 3300025921 Bacteria 4744
69 Ga0207652_10048191 3300025921 Bacteria 3642
70 Ga0207694_10050449 3300025924 Unclassified 3223
71 Ga0207694_10069534 3300025924 Bacteria 2751
72 Ga0207694_10237710 3300025924 Bacteria 1488
73 Ga0207664_10000071 3300025929 Bacteria 105708
74 Ga0207686_10005806 3300025934 Bacteria 6621
75 Ga0207686_10144476 3300025934 Unclassified 1648
76 Ga0207670_10006204 3300025936 Bacteria 6615
77 Ga0207670_10059171 3300025936 Bacteria 2605
78 Ga0207711_10259826 3300025941 Unclassified 1596
79 Ga0207661_10069426 3300025944 Bacteria 2873
80 Ga0207667_10046218 3300025949 Bacteria 4610
81 Ga0207667_10083016 3300025949 Bacteria 3318
82 Ga0207667_10158002 3300025949 Bacteria 2333
83 Ga0207667_10385878 3300025949 Bacteria 1427
84 Ga0207702_10001566 3300026078 Bacteria 22646
85 Ga0207702_10025223 3300026078 Bacteria 4933
86 Ga0207676_10081333 3300026095 Bacteria 2632
87 Ga0207675_100299520 3300026118 Unclassified 1566
88 Ga0209281_1000088 3300027111 Bacteria 245908
89 Ga0209281_1000235 3300027111 Bacteria 115011
90 Ga0265337_1000409 3300028556 Bacteria 22991
91 Ga0265337_1001767 3300028556 Bacteria 10424
92 Ga0265326_10004573 3300028558 Bacteria 4422
93 Ga0265319_1000001 3300028563 Bacteria 549513
94 Ga0265319_1013850 3300028563 Bacteria 3187
95 Ga0265323_10002005 3300028653 Bacteria 9602
96 Ga0265323_10006278 3300028653 Bacteria 5000
97 Ga0265323_10010136 3300028653 Bacteria 3825
98 Ga0265323_10032363 3300028653 Unclassified 1940
99 Ga0265322_10024688 3300028654 Bacteria 1720
100 Ga0265336_10001649 3300028666 Bacteria 9882
101 Ga0265338_10000009 3300028800 Bacteria 448611
102 Ga0265338_10000041 3300028800 Bacteria 230676
103 Ga0265338_10000452 3300028800 Bacteria 73214
104 Ga0265338_10000574 3300028800 Bacteria 64844
105 Ga0265338_10000836 3300028800 Bacteria 51897
106 Ga0265338_10001643 3300028800 Bacteria 35770
107 Ga0265338_10002101 3300028800 Bacteria 30750
108 Ga0265338_10002915 3300028800 Bacteria 24849
109 Ga0265338_10002935 3300028800 Bacteria 24739
110 Ga0265338_10004643 3300028800 Bacteria 18461
111 Ga0265338_10006851 3300028800 Bacteria 14351
112 Ga0265338_10008800 3300028800 Bacteria 12184
113 Ga0265338_10011378 3300028800 Bacteria 10287
114 Ga0265338_10013529 3300028800 Bacteria 9201
115 Ga0265338_10017104 3300028800 Bacteria 7837
116 Ga0265338_10026280 3300028800 Bacteria 5879
117 Ga0265338_10031497 3300028800 Bacteria 5199
118 Ga0265338_10037911 3300028800 Bacteria 4576
119 Ga0265338_10090129 3300028800 Bacteria 2539
120 Ga0265338_10169232 3300028800 Bacteria 1678
121 Ga0265324_10000436 3300029957 Bacteria 29666
122 Ga0265324_10000876 3300029957 Bacteria 19268
123 Ga0265324_10001437 3300029957 Bacteria 13653
124 Ga0265324_10007346 3300029957 Bacteria 4475
125 Ga0265324_10010399 3300029957 Bacteria 3587
126 Ga0265324_10053059 3300029957 Bacteria 1392
127 Ga0265330_10041156 3300031235 Unclassified 2050
128 Ga0265332_10010014 3300031238 Unclassified 4223
129 Ga0265320_10000666 3300031240 Bacteria 26164
130 Ga0265320_10014917 3300031240 Bacteria 4406
131 Ga0265320_10015500 3300031240 Bacteria 4307
132 Ga0265320_10017171 3300031240 Unclassified 4029
133 Ga0265340_10018559 3300031247 Bacteria 3587
134 Ga0265339_10006910 3300031249 Bacteria 7394
135 Ga0265339_10078136 3300031249 Bacteria 1753
136 Ga0265327_10000985 3300031251 Bacteria 40550
137 Ga0265327_10002388 3300031251 Bacteria 19930
138 Ga0265327_10028561 3300031251 Bacteria 3188
139 Ga0265316_10001074 3300031344 Bacteria 29554
140 Ga0265316_10001700 3300031344 Bacteria 23353
141 Ga0265316_10046641 3300031344 Bacteria 3432
142 Ga0265313_10003394 3300031595 Bacteria 12930
143 Ga0265313_10003545 3300031595 Bacteria 12577
144 Ga0316579_10114263 3300031691 Bacteria 1296
145 Ga0265314_10000042 3300031711 Bacteria 215775
146 Ga0265314_10026268 3300031711 Bacteria 4377
147 Ga0265314_10076998 3300031711 Bacteria 2214
148 Ga0265342_10019591 3300031712 Bacteria 4358
149 Ga0265342_10069313 3300031712 Bacteria 2060
150 Ga0265342_10147325 3300031712 Unclassified 1310
151 Ga0316577_10000175 3300031733 Bacteria 20600
152 Ga0316577_10000650 3300031733 Bacteria 14510
153 Ga0316577_10002307 3300031733 Bacteria 9410
154 Ga0373930_0007024 3300034816 Bacteria 1923
155 Ga0373928_0000167 3300035084 Bacteria 12758
156 Ga0373929_0001391 3300035085 Bacteria 4635
157 Ga0373944_0008545 3300035089 Bacteria 2768
158 Ga0373949_0002768 3300035090 Bacteria 4375
159 Ga0373951_0005339 3300035091 Bacteria 2991
160 Ga0373932_0000002 3300035112 Bacteria 711821
161 Ga0373946_0014717 3300035171 Unclassified 2955
162 Ga0373962_0000130 3300035242 Bacteria 15651
163 Ga0316574_0002689 3300035398 Bacteria 8984
164 Ga0373931_0000012 3300035691 Bacteria 267735
165 Ga0373935_0002228 3300035692 Bacteria 11024
166 Ga0373927_0004741 3300035695 Bacteria 9472
167 Ga0373927_0006301 3300035695 Bacteria 8091
168 Ga0373927_0016336 3300035695 Bacteria 4898
169 Ga0373933_0023087 3300035724 Bacteria 3550
170 Ga0373947_0001326 3300035725 Bacteria 15235
171 Ga0373947_0117563 3300035725 Bacteria 1687
172 Ga0373937_0022337 3300036401 Bacteria 5689
173 Ga0373937_0281704 3300036401 Bacteria 1570
174 Ga0316582_0019436 3300036647 Unclassified 3976
175 Ga0316582_0090064 3300036647 Bacteria 2018
176 Ga0316582_0091867 3300036647 Bacteria 1999
177 Ga0316584_0001438 3300036712 Bacteria 14266
178 Ga0316584_0008043 3300036712 Bacteria 7241
179 Ga0316584_0200771 3300036712 Bacteria 1471
180 Ga0316584_0274797 3300036712 Unclassified 1225
181 Ga0373925_0000963 3300037068 Bacteria 26170
182 Ga0373925_0001369 3300037068 Bacteria 21260
183 Ga0373925_0006387 3300037068 Bacteria 8677
184 Ga0316581_0004877 3300037588 Bacteria 3454
185 Ga0395901_0179741 3300038443 Bacteria 2219
186 Ga0400489_73525 3300039093 Bacteria 2164
187 Ga0451577_0001362 3300042876 Bacteria 32891
188 Ga0451577_0034494 3300042876 Bacteria 4561
189 Ga0451577_0483803 3300042876 Unclassified 1124
190 Ga0453684_0000004 3300044712 Bacteria 1469893
191 Ga0453684_0011080 3300044712 Bacteria 15221
192 Ga0453684_0021765 3300044712 Bacteria 9555
193 Ga0453684_0030722 3300044712 Bacteria 7578
194 Ga0453684_0044438 3300044712 Bacteria 5943
195 Ga0453684_0130516 3300044712 Bacteria 3016
196 Ga0453684_0186470 3300044712 Bacteria 2431
197 Ga0453684_0537669 3300044712 Unclassified 1289
198 Ga0453684_0553163 3300044712 Bacteria 1267
199 Ga0466970_0009004 3300044765 Bacteria 5035
200 Ga0451576_0062121 3300045051 Bacteria 3895
201 Ga0451576_0142408 3300045051 Bacteria 2500
202 Ga0451576_0238936 3300045051 Unclassified 1898
203 Ga0495592_0000151 3300046454 Bacteria 60491
204 Ga0495592_0069912 3300046454 Unclassified 2559
205 Ga0495629_0029757 3300046459 Bacteria 3872
206 Ga0495580_0000940 3300046472 Bacteria 25465
207 Ga0495582_0008360 3300046473 Bacteria 5711
208 Ga0495582_0069387 3300046473 Unclassified 1949
209 Ga0495662_0026930 3300046476 Unclassified 2776
210 Ga0495664_0044840 3300046477 Unclassified 2621
211 Ga0495594_0001549 3300046499 Bacteria 11935
212 Ga0495594_0071864 3300046499 Bacteria 1924
213 Ga0495618_0002158 3300046514 Bacteria 12881
214 Ga0495620_0009814 3300046515 Bacteria 5078
215 Ga0495628_0000092 3300046516 Bacteria 71184
216 Ga0495630_0035379 3300046517 Unclassified 3732
217 Ga0495630_0039450 3300046517 Unclassified 3530
218 Ga0495630_0161459 3300046517 Bacteria 1706
219 Ga0495666_0022427 3300046526 Bacteria 3126
220 Ga0495666_0043657 3300046526 Bacteria 2165
221 Ga0495666_0120822 3300046526 Bacteria 1227
222 Ga0495652_0149557 3300046529 Unclassified 1826
223 Ga0495586_0000094 3300046535 Bacteria 54446
224 Ga0495586_0000559 3300046535 Bacteria 21546
225 Ga0495586_0000920 3300046535 Bacteria 16752
226 Ga0495586_0034458 3300046535 Bacteria 2719
227 Ga0495645_0041473 3300046543 Bacteria 3356
228 Ga0495622_0049837 3300046557 Unclassified 1944
229 Ga0495634_0005140 3300046642 Bacteria 10103
230 Ga0495634_0023563 3300046642 Bacteria 4324
231 Ga0495634_0102744 3300046642 Bacteria 1846
232 Ga0495635_0111789 3300046663 Bacteria 1866
233 Ga0495599_0006773 3300046678 Bacteria 6921
234 Ga0495599_0127026 3300046678 Bacteria 1585
235 Ga0495647_0011377 3300046681 Bacteria 3049
236 Ga0495658_0025931 3300046683 Bacteria 3137
237 Ga0495613_0002630 3300046689 Bacteria 13501
238 Ga0495613_0173521 3300046689 Unclassified 1529
239 Ga0495624_0101086 3300046690 Bacteria 1775
240 Ga0495674_0004011 3300047319 Bacteria 14252
241 Ga0495674_0102521 3300047319 Unclassified 2433
242 Ga0495674_0104306 3300047319 Bacteria 2410
243 Ga0495680_0190054 3300047322 Unclassified 1478
244 Ga0495675_0016785 3300047444 Bacteria 4630
245 Ga0495614_0034947 3300048089 Bacteria 2160
246 Ga0496106_0315616 3300048909 Unclassified 1254
247 Ga0496107_0209788 3300048910 Unclassified 1448
248 Ga0496115_0002688 3300048918 Bacteria 12754
249 Ga0496126_0000214 3300048929 Bacteria 127811
250 Ga0501033_0015093 3300049570 Bacteria 5861
251 Ga0501034_0037164 3300049571 Bacteria 4931
252 Ga0501037_0199487 3300049573 Bacteria 1414
253 Ga0501043_0020213 3300049579 Bacteria 5228
254 Ga0501047_0155967 3300049581 Unclassified 2157
255 Ga0501047_0368423 3300049581 Bacteria 1272
256 Ga0501035_0006810 3300049822 Bacteria 10679
257 Ga0501035_0018362 3300049822 Bacteria 6445
258 Ga0501044_0006186 3300049823 Bacteria 13231
259 nmdc:mga06r32_124239_c1 3300050510 Bacteria 2547
260 nmdc:mga08y16_111273_c1 3300050511 Bacteria 2851
261 8007377629 8007375930 Bacteria 4080554
262 Ga0265318_10023204
263 CNXas_1000813
264 JGI24737J22298_10007175
265 Ga0065704_10080166
266 Ga0070658_10047231
267 Ga0070683_100023134
268 Ga0070666_10149208
269 Ga0070680_100027969
270 Ga0070689_100011135
271 Ga0070689_100029235
272 Ga0070687_100135187
273 Ga0070659_100014486
274 Ga0070714_100000025
275 Ga0070711_100002192
276 Ga0070694_100001394
277 Ga0070681_10161401
278 Ga0070706_100000859
279 Ga0070706_100078878
280 Ga0070698_100179057
281 Ga0070679_100052540
282 Ga0070679_100065395
283 Ga0070679_100213490
284 Ga0070697_100168365
285 Ga0070686_100018024
286 Ga0070704_100001090
287 Ga0068855_100062857
288 Ga0068855_100129187
289 Ga0068855_100157590
290 Ga0068856_100000317
291 Ga0068856_100016111
292 Ga0070702_100226280
293 Ga0068859_100002866
294 Ga0068863_100064148
295 Ga0075428_100206685
296 Ga0075428_100296274
297 Ga0097620_100002866
298 Ga0079104_1000215
299 Ga0079104_1001139
300 Ga0079104_1007202
301 Ga0099795_10040517
302 Ga0105240_10046797
303 Ga0105240_10047793
304 Ga0105240_10157889
305 Ga0105240_10256751
306 Ga0105240_10594809
307 Ga0111539_10117399
308 Ga0111539_10194889
309 Ga0111539_10418701
310 Ga0114129_10118171
311 Ga0105242_10006643
312 Ga0105242_10284058
313 Ga0105238_10010768
314 Ga0105238_10028213
315 Ga0105238_10098165
316 Ga0105239_10056212
317 Ga0157370_10038124
318 Ga0157375_10000063
319 Ga0163163_10000065
320 Ga0163163_10172776
321 Ga0157376_10104005
322 Ga0157376_10290640
323 Ga0207705_10054285
324 Ga0207684_10003095
325 Ga0207654_10014649
326 Ga0207695_10105894
327 Ga0207663_10009780
328 Ga0207662_10154975
329 Ga0207652_10027456
330 Ga0207652_10048191
331 Ga0207694_10050449
332 Ga0207694_10069534
333 Ga0207694_10237710
334 Ga0207664_10000071
335 Ga0207686_10005806
336 Ga0207686_10144476
337 Ga0207670_10006204
338 Ga0207670_10059171
339 Ga0207711_10259826
340 Ga0207661_10069426
341 Ga0207667_10046218
342 Ga0207667_10083016
343 Ga0207667_10158002
344 Ga0207667_10385878
345 Ga0207702_10001566
346 Ga0207702_10025223
347 Ga0207676_10081333
348 Ga0207675_100299520
349 Ga0209281_1000088
350 Ga0209281_1000235
351 Ga0265337_1000409
352 Ga0265337_1001767
353 Ga0265326_10004573
354 Ga0265319_1000001
355 Ga0265319_1013850
356 Ga0265323_10002005
357 Ga0265323_10006278
358 Ga0265323_10010136
359 Ga0265323_10032363
360 Ga0265322_10024688
361 Ga0265336_10001649
362 Ga0265338_10000009
363 Ga0265338_10000041
364 Ga0265338_10000452
365 Ga0265338_10000574
366 Ga0265338_10000836
367 Ga0265338_10001643
368 Ga0265338_10002101
369 Ga0265338_10002915
370 Ga0265338_10002935
371 Ga0265338_10004643
372 Ga0265338_10006851
373 Ga0265338_10008800
374 Ga0265338_10011378
375 Ga0265338_10013529
376 Ga0265338_10017104
377 Ga0265338_10026280
378 Ga0265338_10031497
379 Ga0265338_10037911
380 Ga0265338_10090129
381 Ga0265338_10169232
382 Ga0265324_10000436
383 Ga0265324_10000876
384 Ga0265324_10001437
385 Ga0265324_10007346
386 Ga0265324_10010399
387 Ga0265324_10053059
388 Ga0265330_10041156
389 Ga0265332_10010014
390 Ga0265320_10000666
391 Ga0265320_10014917
392 Ga0265320_10015500
393 Ga0265320_10017171
394 Ga0265340_10018559
395 Ga0265339_10006910
396 Ga0265339_10078136
397 Ga0265327_10000985
398 Ga0265327_10002388
399 Ga0265327_10028561
400 Ga0265316_10001074
401 Ga0265316_10001700
402 Ga0265316_10046641
403 Ga0265313_10003394
404 Ga0265313_10003545
405 Ga0316579_10114263
406 Ga0265314_10000042
407 Ga0265314_10026268
408 Ga0265314_10076998
409 Ga0265342_10019591
410 Ga0265342_10069313
411 Ga0265342_10147325
412 Ga0316577_10000175
413 Ga0316577_10000650
414 Ga0316577_10002307
415 Ga0373930_0007024
416 Ga0373928_0000167
417 Ga0373929_0001391
418 Ga0373944_0008545
419 Ga0373949_0002768
420 Ga0373951_0005339
421 Ga0373932_0000002
422 Ga0373946_0014717
423 Ga0373962_0000130
424 Ga0316574_0002689
425 Ga0373931_0000012
426 Ga0373935_0002228
427 Ga0373927_0004741
428 Ga0373927_0006301
429 Ga0373927_0016336
430 Ga0373933_0023087
431 Ga0373947_0001326
432 Ga0373947_0117563
433 Ga0373937_0022337
434 Ga0373937_0281704
435 Ga0316582_0019436
436 Ga0316582_0090064
437 Ga0316582_0091867
438 Ga0316584_0001438
439 Ga0316584_0008043
440 Ga0316584_0200771
441 Ga0316584_0274797
442 Ga0373925_0000963
443 Ga0373925_0001369
444 Ga0373925_0006387
445 Ga0316581_0004877
446 Ga0395901_0179741
447 Ga0400489_73525
448 Ga0451577_0001362
449 Ga0451577_0034494
450 Ga0451577_0483803
451 Ga0453684_0000004
452 Ga0453684_0011080
453 Ga0453684_0021765
454 Ga0453684_0030722
455 Ga0453684_0044438
456 Ga0453684_0130516
457 Ga0453684_0186470
458 Ga0453684_0537669
459 Ga0453684_0553163
460 Ga0466970_0009004
461 Ga0451576_0062121
462 Ga0451576_0142408
463 Ga0451576_0238936
464 Ga0495592_0000151
465 Ga0495592_0069912
466 Ga0495629_0029757
467 Ga0495580_0000940
468 Ga0495582_0008360
469 Ga0495582_0069387
470 Ga0495662_0026930
471 Ga0495664_0044840
472 Ga0495594_0001549
473 Ga0495594_0071864
474 Ga0495618_0002158
475 Ga0495620_0009814
476 Ga0495628_0000092
477 Ga0495630_0035379
478 Ga0495630_0039450
479 Ga0495630_0161459
480 Ga0495666_0022427
481 Ga0495666_0043657
482 Ga0495666_0120822
483 Ga0495652_0149557
484 Ga0495586_0000094
485 Ga0495586_0000559
486 Ga0495586_0000920
487 Ga0495586_0034458
488 Ga0495645_0041473
489 Ga0495622_0049837
490 Ga0495634_0005140
491 Ga0495634_0023563
492 Ga0495634_0102744
493 Ga0495635_0111789
494 Ga0495599_0006773
495 Ga0495599_0127026
496 Ga0495647_0011377
497 Ga0495658_0025931
498 Ga0495613_0002630
499 Ga0495613_0173521
500 Ga0495624_0101086
501 Ga0495674_0004011
502 Ga0495674_0102521
503 Ga0495674_0104306
504 Ga0495680_0190054
505 Ga0495675_0016785
506 Ga0495614_0034947
507 Ga0496106_0315616
508 Ga0496107_0209788
509 Ga0496115_0002688
510 Ga0496126_0000214
511 Ga0501033_0015093
512 Ga0501034_0037164
513 Ga0501037_0199487
514 Ga0501043_0020213
515 Ga0501047_0155967
516 Ga0501047_0368423
517 Ga0501035_0006810
518 Ga0501035_0018362
519 Ga0501044_0006186
520 nmdc:mga06r32_124239_c1
521 nmdc:mga08y16_111273_c1
522 8007377629

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03054

tRNA_Me_trans

tRNA methyl transferase HUP domain

7

248

0.98

PF20258

tRNA_Me_trans_C

Aminomethyltransferase beta-barrel domain

323

399

0.98

PF20259

tRNA_Me_trans_M

tRNA methyl transferase PRC-barrel domain

253

317

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
2deu-assembly2.cif.gz_B cocrystal structure of an rna sulfuration enzyme mnma and trna-glu in the adenylated intermediate state 0.913 1 347
2hma-assembly1.cif.gz_A-2 the crystal structure of trna (5-methylaminomethyl-2-thiouridylate)-methyltransferase trmu from streptococcus pneumoniae 0.911 1 347
2deu-assembly2.cif.gz_B cocrystal structure of an rna sulfuration enzyme mnma and trna-glu in the adenylated intermediate state 0.908 1 347
2der-assembly1.cif.gz_A cocrystal structure of an rna sulfuration enzyme mnma and trna-glu in the initial trna binding state 0.9017 1 347
2hma-assembly1.cif.gz_A-2 the crystal structure of trna (5-methylaminomethyl-2-thiouridylate)-methyltransferase trmu from streptococcus pneumoniae 0.8911 1 347
ID Description Score Start End Superfamily
af_P9WJS5_1_205_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9524 1 203 3.40.50.620
af_P9WJS5_208_272_2.30.30.280 Mainly Beta;Roll;SH3 type barrels.;Adenine nucleotide alpha hydrolases-like domains 0.9409 209 269 2.30.30.280
2hmaA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9402 2 204 3.40.50.620
2detA03 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;Translation factors 0.9386 269 347 2.40.30.10
af_P9WJS5_275_357_2.40.30.10 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;Translation factors 0.9372 273 348 2.40.30.10
ID Description Score Start End GO Terms
AF-A0A2D5MPH0-F1-model_v4 tRNA-specific 2-thiouridylase MnmA (EC 2.8.1.13) 0.9923 1 348 GO:0000049
GO:0002143
GO:0005524
GO:0005737
GO:0103016
AF-A0A2D5MPH0-F1-model_v4 tRNA-specific 2-thiouridylase MnmA (EC 2.8.1.13) 0.9894 1 348 GO:0000049
GO:0002143
GO:0005524
GO:0005737
GO:0103016
AF-A0A522ANQ4-F1-model_v4 tRNA-uridine 2-sulfurtransferase (EC 2.8.1.13) 0.9853 130 348 GO:0000049
GO:0002143
GO:0005524
GO:0103016
AF-A0A350MSX1-F1-model_v4 tRNA 2-thiouridine(34) synthase MnmA 0.9827 227 348 GO:0002143
GO:0016783
AF-A0A832QF14-F1-model_v4 tRNA-uridine 2-sulfurtransferase (EC 2.8.1.13) 0.9797 1 199 GO:0002143
GO:0016740

Map