F370484

General Info

Members Datasets Scaffolds Average Seq Length
261 201 522 477

Family's Representative Sequence

Representative Sequence 3300036459|Ga0372808_002057|Ga0372808_002057_60_1649
Length 529
Sequence MLQGAADLLMQRRAADGVCSRSGAFAGTLMDRLSNATLDRLPSSVQKPAYDRAAIATGIVHLGLGAFHRAHQAVYTDTLLADDPRWGILGVSLRSAETRDALKPQDGLYSVSAIDGHGVGRRVIGALTGMLVGPEDPVGLGARLADPDLRIVSTTVTEKGYSHDPAAGALREEDPDIRYDLLHGDRPRTTLGTIVGGLKRRRAARIPPFTVLACDNLPANGHTLRRLVIRFAELADPELAKWIADEVRFPSTMVDRIVPATTDDDRAKAAAALGLEDAWPIMTEPFTQWVIEDDFSLGRPAWDQADAEFVGDVAPYELMKLRLLNGAHSTLAYLGYLMERETVAVAMQELGIARLIEEMMRLEVTPTLPALACIDVAAYRASLLDRFRNPALQHRTWQIAMDGSQKLPQRLLGTIRERLAVGHSIDRLALGVAAWMRYVTGVDEKGKAIDVRDPLASRLRALADEAGPIAARLAPALFSVREIFGTDLPDDPRFTSVVEALLDRLFTLGVRASVDRLNEAAPFGYASLK

Samples

Sample ID Description Type Environment
1 3300036459 Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE5 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
2 3300002704 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB Metagenome Unclassified
3 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
4 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
5 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
6 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
7 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
8 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
9 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
10 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
11 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
12 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
15 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
16 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
17 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
18 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
19 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
20 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
21 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
22 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
23 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
24 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
25 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
26 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
27 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
28 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
29 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
30 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
31 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
32 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
33 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
34 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
35 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
36 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
38 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
39 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
40 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
41 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
42 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
43 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
44 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
45 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
46 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
47 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
48 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
49 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
50 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
51 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
52 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
53 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
54 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
55 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
56 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
80 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
81 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
82 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
83 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
84 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
85 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
86 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
87 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
88 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
89 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
90 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
91 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
92 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
93 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
94 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
95 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
96 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
97 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
98 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
99 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
100 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
101 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
102 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
103 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
104 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
105 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
106 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
107 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
108 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
109 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
110 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
111 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
112 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
113 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
114 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
115 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
116 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
117 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
118 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
119 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
120 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
121 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
122 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
123 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
124 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
125 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
126 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
127 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
128 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
129 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
130 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
131 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
132 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
133 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
134 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
135 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
136 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
137 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
138 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
139 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
140 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
141 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
142 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
143 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
144 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
147 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
148 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
149 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
150 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
151 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
152 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
153 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
154 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
155 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
156 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
157 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
158 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
159 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
160 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
161 2508501050 Microvirga lupini Lut6 Isolate Nodule
162 2508501114 Microvirga lotononidis WSM3557 Isolate Nodule
163 2511231003 Herbaspirillum sp. CF444 Isolate Rhizosphere
164 2512047030 Paraburkholderia tuberum STM678 Isolate Nodule
165 2513237082 Paraburkholderia mimosarum STM3621 Isolate Nodule
166 2513237083 Paraburkholderia mimosarum LMG 23256 Isolate Nodule
167 2548876994 Herbaspirillum lusitanum P6-12 Isolate Nodule
168 2582581316 Agrobacterium rhizogenes OK036 Isolate Rhizosphere
169 2643221568 Rhizobium sp. Root564 Isolate Unclassified
170 2643221580 Devosia sp. Root635 Isolate Unclassified
171 2643221591 Devosia sp. Root685 Isolate Unclassified
172 2643221629 Devosia sp. Root105 Isolate Unclassified
173 2643221662 Devosia sp. Root413D1 Isolate Unclassified
174 2643221674 Devosia sp. Root436 Isolate Unclassified
175 2713897090 Paracoccus sphaerophysae HAMBI 3106 Isolate Nodule
176 2775506901 Microvirga ossetica V5/3m Isolate Unclassified
177 2818991445 Herbaspirillum hiltneri 3195 Isolate Unclassified
178 2818991461 Neorhizobium alkalisoli 1225 Isolate Unclassified
179 2835312727 Microvirga calopogonii CCBAU 65841 Isolate Nodule
180 2842324504 Paraburkholderia fungorum SEMIA 4007 Isolate Nodule
181 2842348783 Paraburkholderia fungorum SEMIA 4013 Isolate Nodule
182 2848858292 Azospirillum brasilense Az39 Isolate Unclassified
183 2855020534 Paracoccus endophyticus SYSUP0003 Isolate Stem Tuber
184 2884811622 Herbaspirillum sp. 3C11 Isolate Unclassified
185 2884836552 Herbaspirillum sp. 3R-11 Isolate Unclassified
186 2884852848 Herbaspirillum sp. 3R11 Isolate Unclassified
187 2891048133 Martelella lutilitoris GH2-6 Isolate Rhizosphere
188 2894232714 Microvirga tunisiensis Lmie10 Isolate Nodule
189 2894817345 Aureimonas psammosilenae YIM DR1026 Isolate Unclassified
190 2896154374 Herbaspirillum sp. 3R-3a1 Isolate Nodule
191 2897803580 Azospirillum doebereinerae GSF71 Isolate Unclassified
192 2917554339 Chthonobacter rhizosphaerae yh7-1 Isolate Rhizosphere
193 2919166419 Agrobacterium cavarae 2074 Isolate Unclassified
194 2929138655 Agrobacterium sp. R-72433 Hybrid assembly Isolate Unclassified
195 2932401849 Devosia sp. 2618 Isolate Rhizosphere
196 2978969890 Agrobacterium sp. SORGH_AS 787 Isolate Unclassified
197 2984587000 Agrobacterium larrymoorei SORGH_AS974 Isolate Aerial Root
198 642555113 Paraburkholderia phytofirmans PsJN Isolate Unclassified
199 8003955200 Paraburkholderia mimosarum LMG 23256 Isolate Nodule
200 8054460903 Agrobacterium vaccinii B7.6 Isolate Unclassified
201 8055301274 Paraburkholderia kirstenboschensis LMG 28727 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 83.52
Metatranscriptomes 0.38
Isolates 16.09

Biome Distribution

Category Percentage (%)
Aerial Root 0.38
Bulb 0
Endosphere 7.66
Nodule 5.36
Rhizoplane 1.53
Rhizosphere 57.85
Stem 0
Stem Tuber 0.38
Unclassified 0.38

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0372808_002057 3300036459 Bacteria 2244
2 JGI25155J39150_1000251 3300002704 Bacteria 20578
3 JGI25155J39150_1000257 3300002704 Bacteria 20200
4 JGI25156J39149_1000426 3300002705 Bacteria 26196
5 JGI25156J39149_1001417 3300002705 Bacteria 10209
6 JGI25154J39366_1000473 3300002738 Bacteria 21060
7 JGI25154J39366_1000493 3300002738 Bacteria 20237
8 JGI25157J39369_1000450 3300002741 Bacteria 26192
9 rootH2_10009978 3300003320 Bacteria 2931
10 rootH1_10063085 3300003323 Bacteria 2707
11 rootH1_10184634 3300003323 Bacteria 3290
12 Ga0055532_1000101 3300003758 Bacteria 92881
13 Ga0070683_100006222 3300005329 Bacteria 10010
14 Ga0070680_100022236 3300005336 Bacteria 5047
15 Ga0070668_100005193 3300005347 Bacteria 9655
16 Ga0070668_100011919 3300005347 Bacteria 6472
17 Ga0070668_100063089 3300005347 Bacteria 2872
18 Ga0070671_100055578 3300005355 Bacteria 3293
19 Ga0070659_100011751 3300005366 Bacteria 6481
20 Ga0070714_100078690 3300005435 Bacteria 2866
21 Ga0070713_100030289 3300005436 Bacteria 4297
22 Ga0070710_10017099 3300005437 Bacteria 3705
23 Ga0070705_100136312 3300005440 Bacteria 1608
24 Ga0070694_100007293 3300005444 Bacteria 6737
25 Ga0070663_100006220 3300005455 Bacteria 7155
26 Ga0070684_100022348 3300005535 Bacteria 5275
27 Ga0068853_100006365 3300005539 Bacteria 9375
28 Ga0070696_100112806 3300005546 Bacteria 1960
29 Ga0070704_100019107 3300005549 Bacteria 4398
30 Ga0068855_100034713 3300005563 Bacteria 6011
31 Ga0068855_100103917 3300005563 Bacteria 3268
32 Ga0068854_100047209 3300005578 Bacteria 3068
33 Ga0068852_100027547 3300005616 Bacteria 4633
34 Ga0068866_10042049 3300005718 Bacteria 2272
35 Ga0081540_1001114 3300005983 Bacteria 23786
36 Ga0081539_10003681 3300005985 Bacteria 18365
37 Ga0070717_10017536 3300006028 Bacteria 5573
38 Ga0075365_10006851 3300006038 Bacteria 6319
39 Ga0075364_10000018 3300006051 Bacteria 55324
40 Ga0070712_100035383 3300006175 Unclassified 3390
41 Ga0070712_100048083 3300006175 Bacteria 2955
42 Ga0075433_10039207 3300006852 Bacteria 4094
43 Ga0105240_10000569 3300009093 Bacteria 68389
44 Ga0105240_10050238 3300009093 Bacteria 5259
45 Ga0105240_10277807 3300009093 Bacteria 1925
46 Ga0111539_10173922 3300009094 Bacteria 2515
47 Ga0105243_10016372 3300009148 Bacteria 5608
48 Ga0105242_10031636 3300009176 Bacteria 4228
49 Ga0105237_10003921 3300009545 Bacteria 17431
50 Ga0105238_10043832 3300009551 Bacteria 4526
51 Ga0105239_10003384 3300010375 Bacteria 19568
52 Ga0105246_10095935 3300011119 Bacteria 2148
53 Ga0157369_10063231 3300013105 Bacteria 3988
54 Ga0182006_1024045 3300015261 Bacteria 2516
55 Ga0209435_100016 3300025206 Bacteria 305566
56 Ga0209435_100038 3300025206 Bacteria 120273
57 Ga0209435_100143 3300025206 Bacteria 24267
58 Ga0209147_100023 3300025229 Bacteria 437803
59 Ga0207427_104191 3300025231 Bacteria 2553
60 Ga0209437_100166 3300025233 Bacteria 144787
61 Ga0209258_100345 3300025242 Bacteria 67870
62 Ga0209646_1000033 3300025246 Bacteria 369507
63 Ga0209646_1000093 3300025246 Bacteria 183840
64 Ga0209026_1000031 3300025250 Bacteria 325747
65 Ga0209677_101060 3300025253 Bacteria 13035
66 Ga0209759_1000002 3300025256 Bacteria 1027596
67 Ga0209759_1000045 3300025256 Bacteria 235654
68 Ga0209759_1000565 3300025256 Bacteria 37312
69 Ga0209233_1000432 3300025261 Bacteria 30175
70 Ga0209233_1003587 3300025261 Bacteria 5444
71 Ga0209564_1005344 3300025295 Bacteria 7370
72 Ga0207653_10014072 3300025885 Bacteria 2509
73 Ga0207692_10058846 3300025898 Bacteria 1981
74 Ga0207688_10006341 3300025901 Bacteria 6437
75 Ga0207643_10025691 3300025908 Bacteria 3257
76 Ga0207695_10006615 3300025913 Bacteria 14975
77 Ga0207695_10044322 3300025913 Bacteria 4732
78 Ga0207671_10000368 3300025914 Bacteria 64246
79 Ga0207693_10001739 3300025915 Bacteria 19108
80 Ga0207652_10133014 3300025921 Bacteria 2219
81 Ga0207700_10025392 3300025928 Bacteria 4113
82 Ga0207665_10000802 3300025939 Bacteria 21269
83 Ga0207711_10202325 3300025941 Bacteria 1812
84 Ga0207689_10012429 3300025942 Bacteria 7278
85 Ga0207661_10020088 3300025944 Bacteria 4988
86 Ga0207667_10010930 3300025949 Bacteria 10580
87 Ga0207668_10048245 3300025972 Bacteria 2921
88 Ga0207640_10097034 3300025981 Bacteria 2056
89 Ga0207639_10001916 3300026041 Bacteria 13965
90 Ga0207678_10003240 3300026067 Bacteria 14700
91 Ga0207675_100282943 3300026118 Bacteria 1612
92 Ga0207683_10000818 3300026121 Bacteria 28485
93 Ga0207698_10006381 3300026142 Bacteria 7351
94 Ga0268266_10000243 3300028379 Bacteria 92211
95 Ga0268265_10051874 3300028380 Bacteria 3099
96 Ga0265337_1005144 3300028556 Bacteria 5263
97 Ga0265334_10015860 3300028573 Bacteria 3123
98 Ga0265323_10000657 3300028653 Bacteria 18895
99 Ga0265336_10000091 3300028666 Bacteria 69365
100 Ga0265338_10000094 3300028800 Bacteria 168366
101 Ga0265325_10001284 3300031241 Bacteria 17846
102 Ga0265340_10000501 3300031247 Bacteria 21465
103 Ga0265340_10014143 3300031247 Bacteria 4178
104 Ga0265339_10000215 3300031249 Bacteria 47286
105 Ga0265327_10005132 3300031251 Bacteria 11111
106 Ga0265316_10021609 3300031344 Bacteria 5445
107 Ga0307513_10024252 3300031456 Bacteria 7060
108 Ga0307513_10032791 3300031456 Bacteria 5850
109 Ga0307513_10076768 3300031456 Bacteria 3463
110 Ga0265313_10000441 3300031595 Bacteria 44042
111 Ga0265313_10000554 3300031595 Bacteria 38970
112 Ga0265313_10011922 3300031595 Bacteria 5364
113 Ga0307508_10006159 3300031616 Bacteria 11316
114 Ga0307508_10010569 3300031616 Bacteria 8446
115 Ga0265314_10017719 3300031711 Bacteria 5581
116 Ga0307516_10012893 3300031730 Bacteria 8968
117 Ga0307516_10027767 3300031730 Bacteria 5736
118 Ga0307407_10023265 3300031903 Bacteria 3231
119 Ga0307409_100002044 3300031995 Bacteria 10360
120 Ga0307414_10172660 3300032004 Bacteria 1730
121 Ga0307411_10113193 3300032005 Bacteria 1947
122 Ga0307510_10111200 3300033180 Bacteria 2481
123 Ga0373960_0024945 3300035121 Bacteria 1622
124 Ga0373927_0036512 3300035695 Bacteria 3196
125 Ga0395905_0013420 3300037471 Bacteria 7850
126 Ga0395901_0253370 3300038443 Bacteria 1834
127 Ga0436363_1303456 3300039450 Bacteria 4169
128 Ga0439465_0014466 3300041413 Bacteria 2459
129 Ga0466965_0049782 3300044683 Bacteria 2077
130 Ga0451576_0057707 3300045051 Bacteria 4058
131 Ga0495629_0000366 3300046459 Bacteria 38253
132 Ga0495638_0007722 3300046460 Bacteria 7686
133 Ga0495653_0000800 3300046463 Bacteria 24118
134 Ga0495650_0012483 3300046471 Bacteria 4568
135 Ga0495580_0012211 3300046472 Bacteria 6597
136 Ga0495580_0057834 3300046472 Bacteria 2728
137 Ga0495596_0014919 3300046500 Bacteria 3266
138 Ga0495606_0003297 3300046507 Bacteria 17259
139 Ga0495606_0051414 3300046507 Bacteria 2687
140 Ga0495606_0081666 3300046507 Bacteria 2009
141 Ga0495620_0002627 3300046515 Bacteria 10383
142 Ga0495628_0004913 3300046516 Bacteria 11760
143 Ga0495628_0009150 3300046516 Bacteria 8470
144 Ga0495628_0106415 3300046516 Bacteria 2160
145 Ga0495665_0007793 3300046531 Bacteria 5794
146 Ga0495625_0001755 3300046660 Bacteria 25070
147 Ga0495599_0005137 3300046678 Bacteria 7799
148 Ga0495646_0010964 3300046680 Bacteria 5757
149 Ga0495624_0000826 3300046690 Bacteria 24461
150 Ga0495671_0017466 3300046692 Bacteria 3819
151 Ga0495604_0008430 3300047317 Bacteria 8141
152 Ga0495604_0030890 3300047317 Bacteria 4250
153 Ga0495674_0016507 3300047319 Bacteria 6888
154 Ga0495674_0094901 3300047319 Bacteria 2544
155 Ga0495674_0117811 3300047319 Bacteria 2246
156 Ga0495676_0070925 3300047321 Bacteria 2680
157 Ga0495683_0001387 3300047323 Bacteria 16056
158 Ga0495683_0003753 3300047323 Bacteria 8778
159 Ga0495687_002552 3300047443 Bacteria 14405
160 Ga0495687_016163 3300047443 Bacteria 3762
161 Ga0495679_000076 3300047446 Bacteria 92697
162 Ga0495593_0000588 3300047673 Bacteria 20749
163 Ga0495602_0034187 3300048088 Bacteria 4759
164 Ga0495602_0046982 3300048088 Bacteria 3894
165 Ga0496109_0069261 3300048912 Bacteria 3235
166 Ga0496110_0098495 3300048913 Bacteria 2620
167 Ga0496111_0009452 3300048914 Bacteria 6509
168 Ga0496114_0102644 3300048917 Bacteria 2443
169 Ga0496116_0000243 3300048919 Bacteria 99201
170 Ga0496116_0034525 3300048919 Bacteria 3567
171 Ga0496117_0010901 3300048920 Bacteria 8196
172 Ga0496118_0050853 3300048921 Bacteria 3175
173 Ga0496118_0073418 3300048921 Bacteria 2451
174 Ga0496118_0132999 3300048921 Bacteria 1593
175 Ga0496121_0000005 3300048924 Bacteria 1034486
176 Ga0496121_0000759 3300048924 Bacteria 59261
177 Ga0496121_0100298 3300048924 Bacteria 2235
178 Ga0496122_0000457 3300048925 Bacteria 84895
179 Ga0496122_0067517 3300048925 Bacteria 2575
180 Ga0496122_0078270 3300048925 Bacteria 2316
181 Ga0496123_0000321 3300048926 Bacteria 91682
182 Ga0496123_0052492 3300048926 Bacteria 2705
183 Ga0496124_0000428 3300048927 Bacteria 75094
184 Ga0496124_0053354 3300048927 Bacteria 3427
185 Ga0496125_0000115 3300048928 Bacteria 181994
186 Ga0496125_0000449 3300048928 Bacteria 74908
187 Ga0496125_0002007 3300048928 Bacteria 27599
188 Ga0496126_0000554 3300048929 Bacteria 71982
189 Ga0501033_0101905 3300049570 Bacteria 2094
190 Ga0501034_0000732 3300049571 Bacteria 49733
191 Ga0501034_0083694 3300049571 Bacteria 3192
192 Ga0501034_0145589 3300049571 Bacteria 2347
193 Ga0501047_0172066 3300049581 Bacteria 2034
194 Ga0501067_0015018 3300049583 Bacteria 4285
195 Ga0501070_0005944 3300049586 Bacteria 10403
196 Ga0501073_0059759 3300049589 Bacteria 2661
197 Ga0501073_0078733 3300049589 Bacteria 2294
198 Ga0501073_0106931 3300049589 Bacteria 1941
199 Ga0501080_0011068 3300049742 Bacteria 8256
200 Ga0501080_0129999 3300049742 Bacteria 2331
201 Ga0501083_0002746 3300049744 Bacteria 12167
202 Ga0501083_0089831 3300049744 Bacteria 2030
203 Ga0501035_0029084 3300049822 Bacteria 5039
204 Ga0501035_0037151 3300049822 Bacteria 4412
205 Ga0501035_0039394 3300049822 Bacteria 4277
206 Ga0501035_0099872 3300049822 Bacteria 2548
207 Ga0501044_0022743 3300049823 Bacteria 6675
208 Ga0501044_0023375 3300049823 Bacteria 6574
209 Ga0501044_0063291 3300049823 Bacteria 3780
210 nmdc:mga00v17_36_c1 3300050491 Bacteria 85171
211 nmdc:mga00v17_675_c1 3300050491 Bacteria 18761
212 nmdc:mga0yw44_34537_c1 3300050492 Bacteria 2964
213 nmdc:mga0n895_321700_c1 3300050512 Bacteria 1568
214 Ga0500643_003286 3300053087 Bacteria 7860
215 Ga0500562_024016 3300053108 Bacteria 1593
216 Ga0500618_000309 3300053125 Bacteria 36059
217 Ga0500618_004046 3300053125 Bacteria 4817
218 Ga0500634_0000034 3300053161 Bacteria 74144
219 Ga0500636_0000962 3300053177 Bacteria 15499
220 2508732983 2508501050 Bacteria 9633614
221 2509078760 2508501114 Bacteria 7082538
222 2511251134 2511231003 Bacteria 5606035
223 2512352851 2512047030 Bacteria 9031815
224 2513553406 2513237082 Bacteria 8640282
225 2513559667 2513237083 Bacteria 8410967
226 2550696264 2548876994 Bacteria 4904866
227 2585334425 2582581316 Bacteria 7774528
228 2643853752 2643221568 Bacteria 5187270
229 2643912694 2643221580 Bacteria 3816678
230 2643966196 2643221591 Bacteria 4397626
231 2644169788 2643221629 Bacteria 5850260
232 2644350423 2643221662 Bacteria 5851492
233 2644413303 2643221674 Bacteria 3919126
234 2715500403 2713897090 Bacteria 3353799
235 2776260036 2775506901 Bacteria 9631051
236 2776263203 2775506901 Bacteria 9631051
237 2819591447 2818991445 Bacteria 4955017
238 2819688533 2818991461 Bacteria 7026071
239 2835319253 2835312727 Bacteria 7413381
240 2842327185 2842324504 Bacteria 9364110
241 2842350790 2842348783 Bacteria 9002918
242 2848864745 2848858292 Bacteria 7391279
243 2855021802 2855020534 Bacteria 3204685
244 2884815586 2884811622 Bacteria 5552861
245 2884837252 2884836552 Bacteria 5219991
246 2884853543 2884852848 Bacteria 5221161
247 2891048858 2891048133 Bacteria 4447501
248 2894242796 2894232714 Bacteria 8834183
249 2894822144 2894817345 Bacteria 4892941
250 2896155340 2896154374 Bacteria 5221518
251 2897804476 2897803580 Bacteria 7000062
252 2917558106 2917554339 Bacteria 4987857
253 2919168224 2919166419 Bacteria 4952238
254 2929143450 2929138655 Bacteria 5810547
255 2932404847 2932401849 Bacteria 4262978
256 2978970851 2978969890 Bacteria 5400756
257 2984587960 2984587000 Bacteria 5263363
258 642616817 642555113 Bacteria 8214658
259 8003956488 8003955200 Bacteria 8601927
260 8054464553 8054460903 Bacteria 4872905
261 8055306627 8055301274 Bacteria 8587385
262 Ga0372808_002057
263 JGI25155J39150_1000251
264 JGI25155J39150_1000257
265 JGI25156J39149_1000426
266 JGI25156J39149_1001417
267 JGI25154J39366_1000473
268 JGI25154J39366_1000493
269 JGI25157J39369_1000450
270 rootH2_10009978
271 rootH1_10063085
272 rootH1_10184634
273 Ga0055532_1000101
274 Ga0070683_100006222
275 Ga0070680_100022236
276 Ga0070668_100005193
277 Ga0070668_100011919
278 Ga0070668_100063089
279 Ga0070671_100055578
280 Ga0070659_100011751
281 Ga0070714_100078690
282 Ga0070713_100030289
283 Ga0070710_10017099
284 Ga0070705_100136312
285 Ga0070694_100007293
286 Ga0070663_100006220
287 Ga0070684_100022348
288 Ga0068853_100006365
289 Ga0070696_100112806
290 Ga0070704_100019107
291 Ga0068855_100034713
292 Ga0068855_100103917
293 Ga0068854_100047209
294 Ga0068852_100027547
295 Ga0068866_10042049
296 Ga0081540_1001114
297 Ga0081539_10003681
298 Ga0070717_10017536
299 Ga0075365_10006851
300 Ga0075364_10000018
301 Ga0070712_100035383
302 Ga0070712_100048083
303 Ga0075433_10039207
304 Ga0105240_10000569
305 Ga0105240_10050238
306 Ga0105240_10277807
307 Ga0111539_10173922
308 Ga0105243_10016372
309 Ga0105242_10031636
310 Ga0105237_10003921
311 Ga0105238_10043832
312 Ga0105239_10003384
313 Ga0105246_10095935
314 Ga0157369_10063231
315 Ga0182006_1024045
316 Ga0209435_100016
317 Ga0209435_100038
318 Ga0209435_100143
319 Ga0209147_100023
320 Ga0207427_104191
321 Ga0209437_100166
322 Ga0209258_100345
323 Ga0209646_1000033
324 Ga0209646_1000093
325 Ga0209026_1000031
326 Ga0209677_101060
327 Ga0209759_1000002
328 Ga0209759_1000045
329 Ga0209759_1000565
330 Ga0209233_1000432
331 Ga0209233_1003587
332 Ga0209564_1005344
333 Ga0207653_10014072
334 Ga0207692_10058846
335 Ga0207688_10006341
336 Ga0207643_10025691
337 Ga0207695_10006615
338 Ga0207695_10044322
339 Ga0207671_10000368
340 Ga0207693_10001739
341 Ga0207652_10133014
342 Ga0207700_10025392
343 Ga0207665_10000802
344 Ga0207711_10202325
345 Ga0207689_10012429
346 Ga0207661_10020088
347 Ga0207667_10010930
348 Ga0207668_10048245
349 Ga0207640_10097034
350 Ga0207639_10001916
351 Ga0207678_10003240
352 Ga0207675_100282943
353 Ga0207683_10000818
354 Ga0207698_10006381
355 Ga0268266_10000243
356 Ga0268265_10051874
357 Ga0265337_1005144
358 Ga0265334_10015860
359 Ga0265323_10000657
360 Ga0265336_10000091
361 Ga0265338_10000094
362 Ga0265325_10001284
363 Ga0265340_10000501
364 Ga0265340_10014143
365 Ga0265339_10000215
366 Ga0265327_10005132
367 Ga0265316_10021609
368 Ga0307513_10024252
369 Ga0307513_10032791
370 Ga0307513_10076768
371 Ga0265313_10000441
372 Ga0265313_10000554
373 Ga0265313_10011922
374 Ga0307508_10006159
375 Ga0307508_10010569
376 Ga0265314_10017719
377 Ga0307516_10012893
378 Ga0307516_10027767
379 Ga0307407_10023265
380 Ga0307409_100002044
381 Ga0307414_10172660
382 Ga0307411_10113193
383 Ga0307510_10111200
384 Ga0373960_0024945
385 Ga0373927_0036512
386 Ga0395905_0013420
387 Ga0395901_0253370
388 Ga0436363_1303456
389 Ga0439465_0014466
390 Ga0466965_0049782
391 Ga0451576_0057707
392 Ga0495629_0000366
393 Ga0495638_0007722
394 Ga0495653_0000800
395 Ga0495650_0012483
396 Ga0495580_0012211
397 Ga0495580_0057834
398 Ga0495596_0014919
399 Ga0495606_0003297
400 Ga0495606_0051414
401 Ga0495606_0081666
402 Ga0495620_0002627
403 Ga0495628_0004913
404 Ga0495628_0009150
405 Ga0495628_0106415
406 Ga0495665_0007793
407 Ga0495625_0001755
408 Ga0495599_0005137
409 Ga0495646_0010964
410 Ga0495624_0000826
411 Ga0495671_0017466
412 Ga0495604_0008430
413 Ga0495604_0030890
414 Ga0495674_0016507
415 Ga0495674_0094901
416 Ga0495674_0117811
417 Ga0495676_0070925
418 Ga0495683_0001387
419 Ga0495683_0003753
420 Ga0495687_002552
421 Ga0495687_016163
422 Ga0495679_000076
423 Ga0495593_0000588
424 Ga0495602_0034187
425 Ga0495602_0046982
426 Ga0496109_0069261
427 Ga0496110_0098495
428 Ga0496111_0009452
429 Ga0496114_0102644
430 Ga0496116_0000243
431 Ga0496116_0034525
432 Ga0496117_0010901
433 Ga0496118_0050853
434 Ga0496118_0073418
435 Ga0496118_0132999
436 Ga0496121_0000005
437 Ga0496121_0000759
438 Ga0496121_0100298
439 Ga0496122_0000457
440 Ga0496122_0067517
441 Ga0496122_0078270
442 Ga0496123_0000321
443 Ga0496123_0052492
444 Ga0496124_0000428
445 Ga0496124_0053354
446 Ga0496125_0000115
447 Ga0496125_0000449
448 Ga0496125_0002007
449 Ga0496126_0000554
450 Ga0501033_0101905
451 Ga0501034_0000732
452 Ga0501034_0083694
453 Ga0501034_0145589
454 Ga0501047_0172066
455 Ga0501067_0015018
456 Ga0501070_0005944
457 Ga0501073_0059759
458 Ga0501073_0078733
459 Ga0501073_0106931
460 Ga0501080_0011068
461 Ga0501080_0129999
462 Ga0501083_0002746
463 Ga0501083_0089831
464 Ga0501035_0029084
465 Ga0501035_0037151
466 Ga0501035_0039394
467 Ga0501035_0099872
468 Ga0501044_0022743
469 Ga0501044_0023375
470 Ga0501044_0063291
471 nmdc:mga00v17_36_c1
472 nmdc:mga00v17_675_c1
473 nmdc:mga0yw44_34537_c1
474 nmdc:mga0n895_321700_c1
475 Ga0500643_003286
476 Ga0500562_024016
477 Ga0500618_000309
478 Ga0500618_004046
479 Ga0500634_0000034
480 Ga0500636_0000962
481 2508732983
482 2509078760
483 2511251134
484 2512352851
485 2513553406
486 2513559667
487 2550696264
488 2585334425
489 2643853752
490 2643912694
491 2643966196
492 2644169788
493 2644350423
494 2644413303
495 2715500403
496 2776260036
497 2776263203
498 2819591447
499 2819688533
500 2835319253
501 2842327185
502 2842350790
503 2848864745
504 2855021802
505 2884815586
506 2884837252
507 2884853543
508 2891048858
509 2894242796
510 2894822144
511 2896155340
512 2897804476
513 2917558106
514 2919168224
515 2929143450
516 2932404847
517 2978970851
518 2984587960
519 642616817
520 8003956488
521 8054464553
522 8055306627

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08125

Mannitol_dh_C

Mannitol dehydrogenase C-terminal domain

312

506

0.96

PF01232

Mannitol_dh

Mannitol dehydrogenase Rossmann domain

57

304

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
7rk5-assembly1.cif.gz_B mannitol-2-dehydrogenase bound to nadh from aspergillus fumigatus 0.9694 1 482
7rk5-assembly1.cif.gz_B mannitol-2-dehydrogenase bound to nadh from aspergillus fumigatus 0.9596 1 482
4im7-assembly1.cif.gz_A crystal structure of fructuronate reductase (ydfi) from e. coli cft073 (efi target efi-506389) complexed with nadh and d-mannonate 0.9548 15 486
1lj8-assembly1.cif.gz_A crystal structure of mannitol dehydrogenase in complex with nad 0.9505 1 486
1lj8-assembly1.cif.gz_A crystal structure of mannitol dehydrogenase in complex with nad 0.9486 1 486
ID Description Score Start End Superfamily
af_P0CX08_10_294_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9754 1 281 3.40.50.720
af_P39160_282_486_1.10.1040.10 Mainly Alpha;Orthogonal Bundle;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.9734 283 482 1.10.1040.10
af_P0CX09_295_502_1.10.1040.10 Mainly Alpha;Orthogonal Bundle;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.9614 283 485 1.10.1040.10
af_P0CX08_10_294_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9586 1 281 3.40.50.720
4im7A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9563 15 281 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A4S0IEQ5-F1-model_v4 Mannitol dehydrogenase family protein 0.9947 14 119 GO:0016616
AF-A0A257WVE7-F1-model_v4 Mannitol dehydrogenase 0.9904 1 339 GO:0016616
AF-A0A529XEJ5-F1-model_v4 Mannitol dehydrogenase family protein 0.9889 2 337 GO:0016616
GO:0019594
AF-A0A530QXH7-F1-model_v4 Mannitol dehydrogenase family protein 0.988 2 270 GO:0016616
GO:0019594
AF-A0A1Q9A5V6-F1-model_v4 Mannitol dehydrogenase 0.9874 25 483 GO:0016616

Map