F370960

General Info

Members Datasets Scaffolds Average Seq Length
262 176 524 390

Family's Representative Sequence

Representative Sequence 3300005842|Ga0068858_100047279|Ga0068858_1000472793
Length 390
Sequence MESPEAQLEILKRGAAQIINEAELLVKLRLGRPLNVKLGVDPTAPDIHLGFTVALTKLRQFQDLGHQAILIIGDFTAMIGDPSGRSKARPQLTHDQVMANAHSFQQQAYKILDPCRTRTVFNGQWFEMMTFEEVMKLNSRVTLQQMLQREDFKTRVERGEAVHLHEIQYPIMQGWDSVVVKADVEIGGTDQLFNILVGRDLQREEGQPQQVVFLMPLLEGLDGVNKMSKSLGNYIGVSEPPSEMFGKLMSISDELMARYYLLLLSEELPAIHPMEAKKQLARRIVARYHGEPAGDAALEDFNTKFSKGDLEHAEWPVINLNGTGADIVSVVVTAYANAYQIAKSRGDARRLVEQGSIQLRDEKITDPKAEPALKAGDVLKLDKKRAVRIG

Samples

Sample ID Description Type Environment
1 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
2 3300001991 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2 Metagenome Rhizosphere
3 3300002155 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX- M7 Metagenome Rhizosphere
4 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
5 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
6 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
7 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
8 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
9 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
10 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
11 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
12 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
13 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
14 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
15 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
16 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
17 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
18 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
19 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
20 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
21 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
22 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
23 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
24 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
25 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
26 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
27 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
28 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
29 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
30 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
31 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
32 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
33 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
34 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
35 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
36 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
37 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
38 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
39 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
40 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
41 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
42 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
43 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
44 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
45 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
46 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
47 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
48 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
49 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
50 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
51 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
52 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
53 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
54 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
55 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
56 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
57 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
58 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
59 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
60 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
61 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
62 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
63 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
64 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
65 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
66 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
67 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
68 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
69 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
70 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
71 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
72 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
73 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
74 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
75 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
76 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
77 3300025271 Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025290 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (version 2) Metagenome Rhizosphere
79 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
80 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
122 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
123 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
124 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
125 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
126 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
127 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
128 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
129 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
130 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
131 3300042009 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z071817_5348 Metagenome Rhizosphere
132 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
133 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
134 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
135 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
136 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
137 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
138 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
139 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
140 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
141 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
142 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
143 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
144 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
145 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
146 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
147 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
148 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
149 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
150 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
151 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
152 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
153 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
154 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
155 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
156 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
157 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
158 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
159 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
160 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
161 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
162 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
163 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
164 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
165 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
166 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
167 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
168 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
169 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
170 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
171 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
172 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
173 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
174 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
175 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
176 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.38
Nodule 0
Rhizoplane 4.96
Rhizosphere 93.51
Stem 0
Stem Tuber 0
Unclassified 11.83

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068858_100047279 3300005842 Bacteria 3989
2 JGI24743J22301_10000190 3300001991 Bacteria 6384
3 JGI24033J26618_1000054 3300002155 Bacteria 16719
4 JGI25406J46586_10000001 3300003203 Bacteria 251772
5 JGI25406J46586_10000007 3300003203 Bacteria 112227
6 rootH2_10000289 3300003320 Bacteria 26356
7 rootH1_10002231 3300003323 Bacteria 58023
8 JGI25405J52794_10002532 3300003911 Bacteria 3157
9 JGI25405J52794_10004032 3300003911 Unclassified 2602
10 Ga0065704_10083338 3300005289 Bacteria 3476
11 Ga0065704_10084079 3300005289 Bacteria 3380
12 Ga0065712_10012393 3300005290 Bacteria 1753
13 Ga0065707_10002803 3300005295 Unclassified 4862
14 Ga0070676_10001727 3300005328 Bacteria 11113
15 Ga0070683_100058055 3300005329 Bacteria 3596
16 Ga0070666_10066765 3300005335 Bacteria 2442
17 Ga0070680_100024604 3300005336 Bacteria 4812
18 Ga0070682_100009308 3300005337 Bacteria 5561
19 Ga0068868_100008956 3300005338 Bacteria 7181
20 Ga0070689_100013738 3300005340 Bacteria 5866
21 Ga0070689_100057345 3300005340 Bacteria 3022
22 Ga0070661_100007541 3300005344 Bacteria 7507
23 Ga0070668_100001884 3300005347 Bacteria 15324
24 Ga0070669_100009152 3300005353 Bacteria 7058
25 Ga0070675_100001007 3300005354 Bacteria 20224
26 Ga0070675_100002985 3300005354 Bacteria 12783
27 Ga0070675_100032832 3300005354 Bacteria 4203
28 Ga0070673_100085526 3300005364 Bacteria 2567
29 Ga0070688_100001145 3300005365 Bacteria 13255
30 Ga0070688_100007251 3300005365 Bacteria 5973
31 Ga0070659_100060372 3300005366 Bacteria 2995
32 Ga0070667_100015772 3300005367 Bacteria 6250
33 Ga0070713_100097112 3300005436 Unclassified 2545
34 Ga0070710_10012023 3300005437 Unclassified 4291
35 Ga0070710_10086516 3300005437 Bacteria 1841
36 Ga0070711_100237858 3300005439 Bacteria 1423
37 Ga0070705_100030971 3300005440 Bacteria 2958
38 Ga0070705_100201308 3300005440 Bacteria 1365
39 Ga0070700_100005268 3300005441 Bacteria 6841
40 Ga0070694_100006488 3300005444 Bacteria 7109
41 Ga0070708_100001887 3300005445 Bacteria 16088
42 Ga0070708_100048460 3300005445 Bacteria 3755
43 Ga0070663_100016069 3300005455 Bacteria 4849
44 Ga0070678_100015318 3300005456 Unclassified 4870
45 Ga0070662_100001546 3300005457 Bacteria 14200
46 Ga0070685_10028950 3300005466 Bacteria 3074
47 Ga0070706_100005389 3300005467 Bacteria 12189
48 Ga0070706_100012394 3300005467 Bacteria 7899
49 Ga0070706_100025148 3300005467 Bacteria 5481
50 Ga0070706_100036253 3300005467 Bacteria 4555
51 Ga0070707_100006248 3300005468 Bacteria 11089
52 Ga0070707_100029037 3300005468 Bacteria 5264
53 Ga0070707_100047420 3300005468 Bacteria 4114
54 Ga0070707_100177913 3300005468 Bacteria 2074
55 Ga0070698_100001022 3300005471 Bacteria 30790
56 Ga0070699_100038162 3300005518 Bacteria 4160
57 Ga0070699_100100531 3300005518 Bacteria 2535
58 Ga0070699_100216339 3300005518 Bacteria 1707
59 Ga0070679_100005516 3300005530 Bacteria 11722
60 Ga0070684_100002121 3300005535 Bacteria 14623
61 Ga0070697_100001329 3300005536 Bacteria 18677
62 Ga0070697_100002323 3300005536 Bacteria 14616
63 Ga0070697_100046290 3300005536 Bacteria 3526
64 Ga0070697_100342156 3300005536 Unclassified 1291
65 Ga0068853_100000002 3300005539 Bacteria 485323
66 Ga0070665_100079352 3300005548 Bacteria 3288
67 Ga0070665_100086724 3300005548 Unclassified 3136
68 Ga0068855_100008072 3300005563 Bacteria 12720
69 Ga0068856_100000500 3300005614 Bacteria 43502
70 Ga0068859_100033934 3300005617 Bacteria 5123
71 Ga0068858_100031191 3300005842 Bacteria 4950
72 Ga0068860_100002246 3300005843 Bacteria 20333
73 Ga0068860_100022266 3300005843 Bacteria 6132
74 Ga0068860_100073645 3300005843 Bacteria 3247
75 Ga0068862_100009647 3300005844 Bacteria 7979
76 Ga0068862_100099997 3300005844 Bacteria 2536
77 Ga0081455_10000281 3300005937 Bacteria 67337
78 Ga0081455_10001450 3300005937 Bacteria 29329
79 Ga0081455_10003189 3300005937 Bacteria 19030
80 Ga0081455_10007917 3300005937 Bacteria 11122
81 Ga0081455_10008185 3300005937 Bacteria 10907
82 Ga0081455_10039585 3300005937 Unclassified 4165
83 Ga0081455_10137261 3300005937 Bacteria 1904
84 Ga0081538_10042934 3300005981 Bacteria 2846
85 Ga0081540_1000010 3300005983 Bacteria 193206
86 Ga0081540_1039400 3300005983 Bacteria 2477
87 Ga0081539_10000014 3300005985 Bacteria 411270
88 Ga0070717_10069065 3300006028 Unclassified 2941
89 Ga0070717_10095750 3300006028 Bacteria 2513
90 Ga0070712_100011537 3300006175 Bacteria 5606
91 Ga0070712_100170491 3300006175 Bacteria 1688
92 Ga0097620_100033934 3300006931 Bacteria 5123
93 Ga0105240_10000041 3300009093 Bacteria 264078
94 Ga0105245_10033653 3300009098 Bacteria 4544
95 Ga0114129_10003628 3300009147 Bacteria 21715
96 Ga0114129_10165736 3300009147 Bacteria 3016
97 Ga0114129_10730138 3300009147 Bacteria 1270
98 Ga0105241_10042782 3300009174 Unclassified 3429
99 Ga0105237_10044852 3300009545 Bacteria 4451
100 Ga0105249_10000764 3300009553 Bacteria 28918
101 Ga0105249_10001939 3300009553 Bacteria 17967
102 Ga0099796_10008185 3300010159 Bacteria 2775
103 Ga0105239_10018654 3300010375 Bacteria 7664
104 Ga0105239_10063261 3300010375 Bacteria 4062
105 Ga0105239_10549553 3300010375 Bacteria 1315
106 Ga0105246_10148362 3300011119 Bacteria 1772
107 Ga0157371_10104088 3300013102 Unclassified 2014
108 Ga0157370_10120602 3300013104 Bacteria 2448
109 Ga0157369_10039899 3300013105 Bacteria 5129
110 Ga0157374_10009134 3300013296 Bacteria 8496
111 Ga0157374_10019009 3300013296 Bacteria 6077
112 Ga0157374_10043536 3300013296 Unclassified 4148
113 Ga0157378_10005114 3300013297 Bacteria 11516
114 Ga0157378_10074925 3300013297 Bacteria 3046
115 Ga0157372_10104974 3300013307 Unclassified 3231
116 Ga0157372_10292901 3300013307 Bacteria 1893
117 Ga0157375_10001983 3300013308 Bacteria 17679
118 Ga0157375_10012746 3300013308 Bacteria 7463
119 Ga0157375_10031614 3300013308 Bacteria 5007
120 Ga0157375_10124247 3300013308 Bacteria 2694
121 Ga0157375_10149397 3300013308 Bacteria 2470
122 Ga0182008_10010956 3300014497 Bacteria 4836
123 Ga0157379_10026530 3300014968 Bacteria 5158
124 Ga0157376_10030263 3300014969 Unclassified 4321
125 Ga0207666_1000181 3300025271 Bacteria 9612
126 Ga0207673_1000765 3300025290 Bacteria 3467
127 Ga0209050_1000485 3300025298 Bacteria 69621
128 Ga0207697_10000141 3300025315 Bacteria 34858
129 Ga0207697_10000521 3300025315 Bacteria 21689
130 Ga0207697_10002550 3300025315 Bacteria 9375
131 Ga0207697_10004329 3300025315 Bacteria 6796
132 Ga0207697_10005413 3300025315 Bacteria 5935
133 Ga0207692_10079847 3300025898 Bacteria 1746
134 Ga0207688_10002466 3300025901 Bacteria 9952
135 Ga0207647_10010011 3300025904 Bacteria 6714
136 Ga0207645_10003893 3300025907 Bacteria 11158
137 Ga0207705_10086586 3300025909 Bacteria 2290
138 Ga0207684_10000043 3300025910 Bacteria 259939
139 Ga0207684_10033039 3300025910 Bacteria 4401
140 Ga0207684_10042597 3300025910 Bacteria 3848
141 Ga0207707_10042696 3300025912 Unclassified 3956
142 Ga0207695_10000125 3300025913 Bacteria 228810
143 Ga0207671_10004757 3300025914 Bacteria 12814
144 Ga0207693_10029971 3300025915 Bacteria 4294
145 Ga0207693_10196644 3300025915 Unclassified 1586
146 Ga0207660_10014089 3300025917 Bacteria 5249
147 Ga0207662_10000373 3300025918 Bacteria 20188
148 Ga0207662_10069983 3300025918 Unclassified 2121
149 Ga0207649_10000498 3300025920 Bacteria 27853
150 Ga0207646_10009834 3300025922 Bacteria 9416
151 Ga0207646_10030421 3300025922 Bacteria 4895
152 Ga0207646_10068491 3300025922 Bacteria 3169
153 Ga0207646_10145636 3300025922 Bacteria 2135
154 Ga0207646_10307374 3300025922 Bacteria 1432
155 Ga0207646_10325252 3300025922 Bacteria 1389
156 Ga0207681_10002301 3300025923 Bacteria 12150
157 Ga0207681_10077886 3300025923 Bacteria 2332
158 Ga0207659_10005840 3300025926 Bacteria 7502
159 Ga0207659_10008377 3300025926 Bacteria 6413
160 Ga0207659_10011958 3300025926 Bacteria 5499
161 Ga0207687_10159137 3300025927 Bacteria 1731
162 Ga0207700_10113425 3300025928 Unclassified 2185
163 Ga0207644_10044812 3300025931 Bacteria 3144
164 Ga0207690_10017816 3300025932 Bacteria 4345
165 Ga0207706_10000900 3300025933 Bacteria 30537
166 Ga0207706_10050720 3300025933 Unclassified 3667
167 Ga0207706_10149664 3300025933 Bacteria 2053
168 Ga0207670_10012015 3300025936 Bacteria 5047
169 Ga0207665_10020708 3300025939 Bacteria 4324
170 Ga0207691_10040786 3300025940 Bacteria 4289
171 Ga0207661_10011749 3300025944 Bacteria 6356
172 Ga0207661_10042080 3300025944 Bacteria 3600
173 Ga0207679_10064338 3300025945 Bacteria 2741
174 Ga0207667_10092023 3300025949 Bacteria 3133
175 Ga0207651_10088333 3300025960 Bacteria 2259
176 Ga0207668_10007803 3300025972 Bacteria 6367
177 Ga0207668_10010206 3300025972 Bacteria 5668
178 Ga0207658_10003126 3300025986 Bacteria 11848
179 Ga0207677_10060841 3300026023 Bacteria 2612
180 Ga0207703_10014572 3300026035 Bacteria 6134
181 Ga0207703_10033249 3300026035 Bacteria 4087
182 Ga0207639_10000009 3300026041 Bacteria 432727
183 Ga0207678_10028626 3300026067 Unclassified 4862
184 Ga0207702_10000966 3300026078 Bacteria 29534
185 Ga0207641_10009767 3300026088 Bacteria 7901
186 Ga0207683_10007092 3300026121 Bacteria 9605
187 Ga0207683_10035065 3300026121 Bacteria 4364
188 Ga0207683_10045838 3300026121 Unclassified 3824
189 Ga0268266_10020041 3300028379 Bacteria 5700
190 Ga0268266_10020684 3300028379 Bacteria 5609
191 Ga0268266_10043521 3300028379 Bacteria 3838
192 Ga0268265_10068728 3300028380 Bacteria 2748
193 Ga0268264_10005799 3300028381 Bacteria 10469
194 Ga0268264_10016854 3300028381 Bacteria 5981
195 Ga0268264_10036483 3300028381 Bacteria 4051
196 Ga0373943_0126131 3300035170 Bacteria 1365
197 Ga0316574_0087045 3300035398 Bacteria 1989
198 Ga0373935_0026842 3300035692 Bacteria 3558
199 Ga0373935_0211616 3300035692 Unclassified 1344
200 Ga0373947_0031746 3300035725 Unclassified 3110
201 Ga0373937_0085782 3300036401 Bacteria 2914
202 Ga0373925_0086061 3300037068 Bacteria 2397
203 Ga0395899_0000015 3300037312 Bacteria 470061
204 Ga0395899_0071613 3300037312 Bacteria 2537
205 Ga0395900_0004886 3300037418 Bacteria 14115
206 Ga0395898_0000047 3300037466 Bacteria 294005
207 Ga0395898_0003960 3300037466 Bacteria 16321
208 Ga0395905_0032135 3300037471 Bacteria 4938
209 Ga0439451_019143 3300042009 Bacteria 1381
210 Ga0466965_0034363 3300044683 Bacteria 2480
211 Ga0466971_0000043 3300044719 Bacteria 51089
212 Ga0466957_0062654 3300044842 Bacteria 2284
213 Ga0451576_0047803 3300045051 Bacteria 4497
214 Ga0466967_0037994 3300045976 Bacteria 4126
215 Ga0466967_0315826 3300045976 Bacteria 1506
216 Ga0495641_0091505 3300046461 Bacteria 1359
217 Ga0495582_0068114 3300046473 Unclassified 1967
218 Ga0495608_0041522 3300046511 Unclassified 3078
219 Ga0495643_0000220 3300046522 Bacteria 87736
220 Ga0495652_0053282 3300046529 Bacteria 3448
221 Ga0495645_0065919 3300046543 Bacteria 2619
222 Ga0495634_0039577 3300046642 Unclassified 3210
223 Ga0495634_0062800 3300046642 Bacteria 2466
224 Ga0495635_0162319 3300046663 Bacteria 1521
225 Ga0495599_0019327 3300046678 Bacteria 4246
226 Ga0495623_0031904 3300046679 Bacteria 3386
227 Ga0495624_0121588 3300046690 Bacteria 1603
228 Ga0495675_0015174 3300047444 Bacteria 4870
229 Ga0495684_0033489 3300047471 Unclassified 3940
230 Ga0495602_0022802 3300048088 Bacteria 6120
231 Ga0496102_0210834 3300048905 Bacteria 1832
232 Ga0496103_0049085 3300048906 Bacteria 2610
233 Ga0496103_0137438 3300048906 Bacteria 1562
234 Ga0496105_0025997 3300048908 Unclassified 4771
235 Ga0496108_0077528 3300048911 Bacteria 2811
236 Ga0496109_0018214 3300048912 Bacteria 6167
237 Ga0496109_0054202 3300048912 Bacteria 3658
238 Ga0496111_0123644 3300048914 Bacteria 1912
239 Ga0496112_0044340 3300048915 Bacteria 4357
240 Ga0496112_0053752 3300048915 Unclassified 3956
241 Ga0496114_0020687 3300048917 Bacteria 5341
242 Ga0496115_0001050 3300048918 Bacteria 20035
243 Ga0496115_0006255 3300048918 Bacteria 8711
244 Ga0496125_0000102 3300048928 Bacteria 201692
245 Ga0501031_0011083 3300049568 Bacteria 5875
246 Ga0501032_0000020 3300049569 Bacteria 148483
247 Ga0501033_0000001 3300049570 Bacteria 795921
248 Ga0501033_0000014 3300049570 Bacteria 226000
249 Ga0501036_0085117 3300049572 Bacteria 2673
250 Ga0501037_0000022 3300049573 Bacteria 147056
251 Ga0501043_0000429 3300049579 Bacteria 37736
252 Ga0501047_0011296 3300049581 Bacteria 8453
253 Ga0501070_0002936 3300049586 Bacteria 14840
254 Ga0501080_0295606 3300049742 Bacteria 1470
255 Ga0501035_0000003 3300049822 Bacteria 557461
256 Ga0501044_0000939 3300049823 Bacteria 34954
257 nmdc:mga05p37_121268_c1 3300050507 Unclassified 3212
258 nmdc:mga05p37_141449_c1 3300050507 Bacteria 2948
259 nmdc:mga08y16_276103_c1 3300050511 Bacteria 1734
260 nmdc:mga0a205_165584_c1 3300050515 Unclassified 2106
261 Ga0495601_0006286 3300053077 Bacteria 6939
262 Ga0466962_0000003 3300061719 Bacteria 187594
263 Ga0068858_100047279
264 JGI24743J22301_10000190
265 JGI24033J26618_1000054
266 JGI25406J46586_10000001
267 JGI25406J46586_10000007
268 rootH2_10000289
269 rootH1_10002231
270 JGI25405J52794_10002532
271 JGI25405J52794_10004032
272 Ga0065704_10083338
273 Ga0065704_10084079
274 Ga0065712_10012393
275 Ga0065707_10002803
276 Ga0070676_10001727
277 Ga0070683_100058055
278 Ga0070666_10066765
279 Ga0070680_100024604
280 Ga0070682_100009308
281 Ga0068868_100008956
282 Ga0070689_100013738
283 Ga0070689_100057345
284 Ga0070661_100007541
285 Ga0070668_100001884
286 Ga0070669_100009152
287 Ga0070675_100001007
288 Ga0070675_100002985
289 Ga0070675_100032832
290 Ga0070673_100085526
291 Ga0070688_100001145
292 Ga0070688_100007251
293 Ga0070659_100060372
294 Ga0070667_100015772
295 Ga0070713_100097112
296 Ga0070710_10012023
297 Ga0070710_10086516
298 Ga0070711_100237858
299 Ga0070705_100030971
300 Ga0070705_100201308
301 Ga0070700_100005268
302 Ga0070694_100006488
303 Ga0070708_100001887
304 Ga0070708_100048460
305 Ga0070663_100016069
306 Ga0070678_100015318
307 Ga0070662_100001546
308 Ga0070685_10028950
309 Ga0070706_100005389
310 Ga0070706_100012394
311 Ga0070706_100025148
312 Ga0070706_100036253
313 Ga0070707_100006248
314 Ga0070707_100029037
315 Ga0070707_100047420
316 Ga0070707_100177913
317 Ga0070698_100001022
318 Ga0070699_100038162
319 Ga0070699_100100531
320 Ga0070699_100216339
321 Ga0070679_100005516
322 Ga0070684_100002121
323 Ga0070697_100001329
324 Ga0070697_100002323
325 Ga0070697_100046290
326 Ga0070697_100342156
327 Ga0068853_100000002
328 Ga0070665_100079352
329 Ga0070665_100086724
330 Ga0068855_100008072
331 Ga0068856_100000500
332 Ga0068859_100033934
333 Ga0068858_100031191
334 Ga0068860_100002246
335 Ga0068860_100022266
336 Ga0068860_100073645
337 Ga0068862_100009647
338 Ga0068862_100099997
339 Ga0081455_10000281
340 Ga0081455_10001450
341 Ga0081455_10003189
342 Ga0081455_10007917
343 Ga0081455_10008185
344 Ga0081455_10039585
345 Ga0081455_10137261
346 Ga0081538_10042934
347 Ga0081540_1000010
348 Ga0081540_1039400
349 Ga0081539_10000014
350 Ga0070717_10069065
351 Ga0070717_10095750
352 Ga0070712_100011537
353 Ga0070712_100170491
354 Ga0097620_100033934
355 Ga0105240_10000041
356 Ga0105245_10033653
357 Ga0114129_10003628
358 Ga0114129_10165736
359 Ga0114129_10730138
360 Ga0105241_10042782
361 Ga0105237_10044852
362 Ga0105249_10000764
363 Ga0105249_10001939
364 Ga0099796_10008185
365 Ga0105239_10018654
366 Ga0105239_10063261
367 Ga0105239_10549553
368 Ga0105246_10148362
369 Ga0157371_10104088
370 Ga0157370_10120602
371 Ga0157369_10039899
372 Ga0157374_10009134
373 Ga0157374_10019009
374 Ga0157374_10043536
375 Ga0157378_10005114
376 Ga0157378_10074925
377 Ga0157372_10104974
378 Ga0157372_10292901
379 Ga0157375_10001983
380 Ga0157375_10012746
381 Ga0157375_10031614
382 Ga0157375_10124247
383 Ga0157375_10149397
384 Ga0182008_10010956
385 Ga0157379_10026530
386 Ga0157376_10030263
387 Ga0207666_1000181
388 Ga0207673_1000765
389 Ga0209050_1000485
390 Ga0207697_10000141
391 Ga0207697_10000521
392 Ga0207697_10002550
393 Ga0207697_10004329
394 Ga0207697_10005413
395 Ga0207692_10079847
396 Ga0207688_10002466
397 Ga0207647_10010011
398 Ga0207645_10003893
399 Ga0207705_10086586
400 Ga0207684_10000043
401 Ga0207684_10033039
402 Ga0207684_10042597
403 Ga0207707_10042696
404 Ga0207695_10000125
405 Ga0207671_10004757
406 Ga0207693_10029971
407 Ga0207693_10196644
408 Ga0207660_10014089
409 Ga0207662_10000373
410 Ga0207662_10069983
411 Ga0207649_10000498
412 Ga0207646_10009834
413 Ga0207646_10030421
414 Ga0207646_10068491
415 Ga0207646_10145636
416 Ga0207646_10307374
417 Ga0207646_10325252
418 Ga0207681_10002301
419 Ga0207681_10077886
420 Ga0207659_10005840
421 Ga0207659_10008377
422 Ga0207659_10011958
423 Ga0207687_10159137
424 Ga0207700_10113425
425 Ga0207644_10044812
426 Ga0207690_10017816
427 Ga0207706_10000900
428 Ga0207706_10050720
429 Ga0207706_10149664
430 Ga0207670_10012015
431 Ga0207665_10020708
432 Ga0207691_10040786
433 Ga0207661_10011749
434 Ga0207661_10042080
435 Ga0207679_10064338
436 Ga0207667_10092023
437 Ga0207651_10088333
438 Ga0207668_10007803
439 Ga0207668_10010206
440 Ga0207658_10003126
441 Ga0207677_10060841
442 Ga0207703_10014572
443 Ga0207703_10033249
444 Ga0207639_10000009
445 Ga0207678_10028626
446 Ga0207702_10000966
447 Ga0207641_10009767
448 Ga0207683_10007092
449 Ga0207683_10035065
450 Ga0207683_10045838
451 Ga0268266_10020041
452 Ga0268266_10020684
453 Ga0268266_10043521
454 Ga0268265_10068728
455 Ga0268264_10005799
456 Ga0268264_10016854
457 Ga0268264_10036483
458 Ga0373943_0126131
459 Ga0316574_0087045
460 Ga0373935_0026842
461 Ga0373935_0211616
462 Ga0373947_0031746
463 Ga0373937_0085782
464 Ga0373925_0086061
465 Ga0395899_0000015
466 Ga0395899_0071613
467 Ga0395900_0004886
468 Ga0395898_0000047
469 Ga0395898_0003960
470 Ga0395905_0032135
471 Ga0439451_019143
472 Ga0466965_0034363
473 Ga0466971_0000043
474 Ga0466957_0062654
475 Ga0451576_0047803
476 Ga0466967_0037994
477 Ga0466967_0315826
478 Ga0495641_0091505
479 Ga0495582_0068114
480 Ga0495608_0041522
481 Ga0495643_0000220
482 Ga0495652_0053282
483 Ga0495645_0065919
484 Ga0495634_0039577
485 Ga0495634_0062800
486 Ga0495635_0162319
487 Ga0495599_0019327
488 Ga0495623_0031904
489 Ga0495624_0121588
490 Ga0495675_0015174
491 Ga0495684_0033489
492 Ga0495602_0022802
493 Ga0496102_0210834
494 Ga0496103_0049085
495 Ga0496103_0137438
496 Ga0496105_0025997
497 Ga0496108_0077528
498 Ga0496109_0018214
499 Ga0496109_0054202
500 Ga0496111_0123644
501 Ga0496112_0044340
502 Ga0496112_0053752
503 Ga0496114_0020687
504 Ga0496115_0001050
505 Ga0496115_0006255
506 Ga0496125_0000102
507 Ga0501031_0011083
508 Ga0501032_0000020
509 Ga0501033_0000001
510 Ga0501033_0000014
511 Ga0501036_0085117
512 Ga0501037_0000022
513 Ga0501043_0000429
514 Ga0501047_0011296
515 Ga0501070_0002936
516 Ga0501080_0295606
517 Ga0501035_0000003
518 Ga0501044_0000939
519 nmdc:mga05p37_121268_c1
520 nmdc:mga05p37_141449_c1
521 nmdc:mga08y16_276103_c1
522 nmdc:mga0a205_165584_c1
523 Ga0495601_0006286
524 Ga0466962_0000003

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00579

tRNA-synt_1b

tRNA synthetases class I (W and Y)

29

306

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
6bqz-assembly1.cif.gz_A crystal structure of tyrosine-trna synthetase from acinetobacter baumannii with bound l-tyrosine 0.9372 2 212
6bqz-assembly2.cif.gz_B crystal structure of tyrosine-trna synthetase from acinetobacter baumannii with bound l-tyrosine 0.9305 2 212
6bqy-assembly2.cif.gz_B crystal structure of tyrosine-trna synthetase from acinetobacter baumannii 0.9152 2 212
6bqz-assembly1.cif.gz_A crystal structure of tyrosine-trna synthetase from acinetobacter baumannii with bound l-tyrosine 0.8954 2 212
6bqz-assembly2.cif.gz_B crystal structure of tyrosine-trna synthetase from acinetobacter baumannii with bound l-tyrosine 0.8931 2 212
ID Description Score Start End Superfamily
1h3fB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9364 2 211 3.40.50.620
1h3fB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9143 2 211 3.40.50.620
af_Q5A6Q6_103_204_3.10.290.10 Alpha Beta;Roll;Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A;RNA-binding S4 domain 0.9077 338 368 3.10.290.10
1h3fB02 Mainly Alpha;Orthogonal Bundle;Tyrosyl-Transfer RNA Synthetase;Tyrosyl-Transfer RNA Synthetase 0.8887 212 282 1.10.240.10
af_Q54WD9_9_271_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8723 9 211 3.40.50.620
ID Description Score Start End GO Terms
AF-W1XM60-F1-model_v4 tyrosine--tRNA ligase (EC 6.1.1.1) 0.9558 89 214 GO:0004831
GO:0005524
GO:0005829
GO:0006437
AF-X1JGY7-F1-model_v4 tyrosine--tRNA ligase (EC 6.1.1.1) 0.9528 131 227 GO:0004831
GO:0005524
GO:0005829
GO:0006437
AF-A0A6I1W0V3-F1-model_v4 Tyrosine--tRNA ligase (EC 6.1.1.1) 0.9516 129 253 GO:0004831
GO:0005524
GO:0005829
GO:0006437
AF-A0A6I1INX2-F1-model_v4 deleted 0.9486 101 249
AF-T0ZFS6-F1-model_v4 tyrosine--tRNA ligase (EC 6.1.1.1) 0.9458 115 257 GO:0004831
GO:0005524
GO:0005829
GO:0006437

Map