F371071

General Info

Members Datasets Scaffolds Average Seq Length
262 194 247 242

Family's Representative Sequence

Representative Sequence 3300009982|Ga0105147_102309|Ga0105147_1023091
Length 286
Sequence MRQLRHRNATSMPAWVYILVRPLYLSAATHNATSLAVSETNLRNRKTMRLQGKRALITAAAQGIGRATAEAFVAEGAQVIATDLNPYALGSLQGVQTRVLDVTRPEAITALAAELGRIDVLFNCAGYVHHGSILDADEAAWAFSYELNVSSMFRMIRAFLPGMLEAGHGSIINMSSVASSIKGAPNRCVYGTTKAAVAADYVARGIRCNAICPGTVQSPSLDQRIAAQAKLEGRSEAEVRAAFVGRQPMGRVAEAREIAQLAVYLASDESAFTTGTAQVIDGGWSN

Samples

Sample ID Description Type Environment
1 2513237087 Azorhizobium doebereinerae UFLA1-100 Isolate Nodule
2 2828305725 Xanthobacter tagetidis DSM 11105 Isolate Unclassified
3 2847686936 Mesorhizobium sp. M1A.F.Ca.IN.022.06.1.1 Isolate Nodule
4 2871444079 Mesorhizobium sp. M1A.F.Ca.IN.020.06.1.1 Isolate Nodule
5 2882456835 Microvirga sp. KLBC 81 Isolate Unclassified
6 2919679072 Pseudotabrizicola sp. 4114 Isolate Unclassified
7 2922158528 Mesorhizobium sp. M1A.F.Ca.IN.022.05.2.1 Isolate Nodule
8 2924726620 Mesorhizobium sp. M1A.F.Ca.IN.020.03.2.1 Isolate Nodule
9 2928963466 Dyella japonica 1073 Isolate Unclassified
10 2937891427 Mesorhizobium sp. M1A.F.Ca.IN.022.07.1.1 Isolate Nodule
11 2965062239 Mesorhizobium sp. M1A.F.Ca.ET.072.01.1.1 Isolate Nodule
12 2968091066 Mesorhizobium sp. AA23 Isolate Unclassified
13 2968128360 Mesorhizobium sp. WSM3873 Isolate Unclassified
14 2996341866 Mesorhizobium sp. M1A.F.Ca.IN.020.32.1.1 Isolate Nodule
15 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
16 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
17 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
18 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
19 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
20 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
21 3300002771 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB Metagenome Endosphere
22 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
23 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
24 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
25 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
26 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
27 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
28 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
29 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
30 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
31 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
32 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
33 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
34 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
35 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
36 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
37 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
38 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
39 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
40 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
41 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
42 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
43 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
44 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
45 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
46 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
47 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
48 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
49 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
50 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
51 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
52 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
53 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
54 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
55 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
56 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
57 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
58 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
59 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
60 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
61 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
62 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
63 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
64 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
65 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
66 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
67 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
68 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
69 3300009982 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_189 metaG Metagenome Rhizosphere
70 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
71 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
72 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
73 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
74 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
75 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
76 3300015687 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 002.1_G08 Metagenome Rhizosphere
77 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
78 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
79 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
80 3300024225 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 Metagenome Rhizosphere
81 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
82 3300025207 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
83 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
84 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
85 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
86 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
87 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
88 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
89 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
90 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
91 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
92 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
93 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
94 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
95 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
96 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
116 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
117 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
118 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
119 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
120 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
121 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
122 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
123 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
124 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
125 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
126 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
127 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
128 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
129 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
130 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
131 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
132 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
133 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
134 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
135 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
136 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
137 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
138 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
139 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
140 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
141 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
142 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
143 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
144 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
145 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
146 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
147 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
148 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
149 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
150 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
151 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
152 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
153 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
154 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
155 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
157 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
158 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
159 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
160 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
161 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
162 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
163 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
164 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
165 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
166 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
167 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
168 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
169 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
170 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
171 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
172 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
173 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
174 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
175 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
176 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
177 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
178 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
179 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
180 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
181 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
182 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
183 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
184 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
185 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
186 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
187 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
188 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
189 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
190 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
191 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
192 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
193 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
194 8004640170 Mesorhizobium sp. GbtcB19 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 93.89
Metatranscriptomes 0.38
Isolates 5.73

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 14.89
Nodule 3.05
Rhizoplane 1.53
Rhizosphere 66.41
Stem 0
Stem Tuber 0
Unclassified 14.12

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24739J22299_10001025 3300001989 Bacteria 10335
2 JGI24735J21928_10001024 3300002067 Bacteria 9999
3 JGI24735J21928_10059685 3300002067 Bacteria 1096
4 JGI25156J39149_1001978 3300002705 Bacteria 7868
5 JGI25162J39368_1000066 3300002737 Bacteria 130612
6 JGI25162J39368_1003666 3300002737 Bacteria 4206
7 JGI25154J39366_1002914 3300002738 Bacteria 3970
8 JGI25157J39369_1000050 3300002741 Bacteria 114470
9 JGI25163J39215_1000565 3300002771 Bacteria 10522
10 JGI25164J39214_1000056 3300002772 Bacteria 114468
11 JGI25165J46597_1000009 3300003214 Bacteria 467965
12 Ga0055538_1001312 3300003751 Bacteria 5021
13 Ga0055527_1011729 3300003760 Bacteria 999
14 Ga0055535_1000045 3300003761 Bacteria 140688
15 Ga0055542_1000010 3300003762 Bacteria 414813
16 Ga0055542_1000079 3300003762 Bacteria 130623
17 Ga0055529_1000122 3300003763 Bacteria 114462
18 JGI25405J52794_10036456 3300003911 Bacteria 1032
19 Ga0070658_10012119 3300005327 Bacteria 6922
20 Ga0070658_10098173 3300005327 Bacteria 2419
21 Ga0070658_10821078 3300005327 Bacteria 808
22 Ga0070666_10000005 3300005335 Bacteria 343092
23 Ga0070680_100078278 3300005336 Bacteria 2724
24 Ga0070691_10003143 3300005341 Bacteria 7390
25 Ga0070661_100023611 3300005344 Bacteria 4408
26 Ga0070661_100034165 3300005344 Bacteria 3687
27 Ga0070688_100111720 3300005365 Bacteria 1818
28 Ga0070709_10189833 3300005434 Bacteria 1448
29 Ga0070713_100877521 3300005436 Bacteria 862
30 Ga0070710_10520234 3300005437 Bacteria 817
31 Ga0070701_10183219 3300005438 Bacteria 1227
32 Ga0070708_100003048 3300005445 Bacteria 13012
33 Ga0070663_100190072 3300005455 Bacteria 1597
34 Ga0070681_10011457 3300005458 Bacteria 8776
35 Ga0070685_10044709 3300005466 Bacteria 2536
36 Ga0070706_100026401 3300005467 Bacteria 5344
37 Ga0070707_100011840 3300005468 Bacteria 8143
38 Ga0070679_100012582 3300005530 Bacteria 8091
39 Ga0070679_100422583 3300005530 Bacteria 1278
40 Ga0070697_100030782 3300005536 Bacteria 4313
41 Ga0070665_100000912 3300005548 Bacteria 37939
42 Ga0068855_100010490 3300005563 Bacteria 11175
43 Ga0068860_100025258 3300005843 Bacteria 5733
44 Ga0068860_100166065 3300005843 Bacteria 2131
45 Ga0068862_100578920 3300005844 Bacteria 1075
46 Ga0081455_10000835 3300005937 Bacteria 39661
47 Ga0081538_10054336 3300005981 Bacteria 2370
48 Ga0081538_10193110 3300005981 Bacteria 850
49 Ga0081540_1013096 3300005983 Bacteria 5415
50 Ga0081539_10003370 3300005985 Bacteria 19783
51 Ga0081539_10202313 3300005985 Bacteria 916
52 Ga0075365_10173599 3300006038 Bacteria 1505
53 Ga0075364_10230810 3300006051 Bacteria 1257
54 Ga0070715_10053152 3300006163 Bacteria 1749
55 Ga0070716_100020794 3300006173 Bacteria 3450
56 Ga0075362_10037879 3300006177 Bacteria 2116
57 Ga0075362_10099544 3300006177 Bacteria 1358
58 Ga0075367_10017517 3300006178 Bacteria 3933
59 Ga0075369_10091228 3300006186 Bacteria 1360
60 Ga0075366_10020405 3300006195 Bacteria 3846
61 Ga0075436_100001731 3300006914 Bacteria 14950
62 Ga0105240_10007999 3300009093 Bacteria 15231
63 Ga0111539_11261589 3300009094 Bacteria 858
64 Ga0105248_10422393 3300009177 Bacteria 1501
65 Ga0105238_10016211 3300009551 Bacteria 7541
66 Ga0105147_102309 3300009982 Bacteria 1579
67 Ga0157369_10237510 3300013105 Bacteria 1904
68 Ga0157374_10660967 3300013296 Bacteria 1057
69 Ga0163162_10000281 3300013306 Bacteria 46556
70 Ga0163162_10135613 3300013306 Bacteria 2572
71 Ga0163163_10000205 3300014325 Bacteria 61330
72 Ga0157379_10024798 3300014968 Bacteria 5323
73 Ga0157379_10135405 3300014968 Bacteria 2219
74 Ga0157376_10349495 3300014969 Bacteria 1414
75 Ga0183368_1004 3300015687 Bacteria 1211761
76 Ga0213872_10097326 3300021361 Bacteria 1314
77 Ga0213876_10016275 3300021384 Bacteria 3931
78 Ga0213876_10018209 3300021384 Bacteria 3707
79 Ga0213875_10000046 3300021388 Bacteria 149850
80 Ga0213875_10012270 3300021388 Bacteria 4238
81 Ga0224572_1007131 3300024225 Bacteria 2039
82 Ga0209435_105524 3300025206 Bacteria 1415
83 Ga0209760_100572 3300025207 Bacteria 6575
84 Ga0209784_100013 3300025224 Bacteria 518664
85 Ga0209566_110231 3300025225 Bacteria 953
86 Ga0209674_100063 3300025226 Bacteria 275507
87 Ga0209672_100253 3300025228 Bacteria 39760
88 Ga0207427_100030 3300025231 Bacteria 358045
89 Ga0209437_100012 3300025233 Bacteria 792625
90 Ga0209437_100416 3300025233 Bacteria 38751
91 Ga0209258_100019 3300025242 Bacteria 566728
92 Ga0209258_106425 3300025242 Bacteria 1845
93 Ga0209646_1000458 3300025246 Bacteria 21135
94 Ga0209026_1000015 3300025250 Bacteria 395555
95 Ga0209026_1003010 3300025250 Bacteria 5814
96 Ga0209148_1000001 3300025254 Bacteria 2545271
97 Ga0209148_1000005 3300025254 Bacteria 1806504
98 Ga0209759_1000023 3300025256 Bacteria 321695
99 Ga0209759_1005828 3300025256 Bacteria 4229
100 Ga0209233_1000002 3300025261 Bacteria 2501366
101 Ga0209455_1000027 3300025272 Bacteria 566710
102 Ga0209455_1006810 3300025272 Bacteria 3323
103 Ga0207692_10071484 3300025898 Bacteria 1830
104 Ga0207680_10000005 3300025903 Bacteria 660983
105 Ga0207705_10022098 3300025909 Bacteria 4539
106 Ga0207705_10099799 3300025909 Bacteria 2135
107 Ga0207684_10298090 3300025910 Bacteria 1390
108 Ga0207707_10024634 3300025912 Bacteria 5267
109 Ga0207695_10040384 3300025913 Bacteria 5004
110 Ga0207663_10397852 3300025916 Bacteria 1053
111 Ga0207660_10145063 3300025917 Bacteria 1818
112 Ga0207657_10016660 3300025919 Bacteria 7081
113 Ga0207649_10052871 3300025920 Bacteria 2522
114 Ga0207652_10026698 3300025921 Bacteria 4812
115 Ga0207646_10027381 3300025922 Bacteria 5199
116 Ga0207646_10601259 3300025922 Bacteria 987
117 Ga0207694_10001048 3300025924 Bacteria 24066
118 Ga0207667_10020302 3300025949 Bacteria 7394
119 Ga0207678_10120263 3300026067 Bacteria 2241
120 Ga0207702_10452028 3300026078 Bacteria 1246
121 Ga0207676_10261161 3300026095 Bacteria 1564
122 Ga0268266_10000004 3300028379 Bacteria 1495817
123 Ga0268266_10000768 3300028379 Bacteria 42899
124 Ga0268264_10136566 3300028381 Bacteria 2181
125 Ga0268264_10184665 3300028381 Bacteria 1896
126 Ga0268264_10508705 3300028381 Bacteria 1176
127 Ga0265760_10094595 3300031090 Bacteria 939
128 Ga0265325_10000906 3300031241 Bacteria 21384
129 Ga0265316_10052866 3300031344 Bacteria 3185
130 Ga0307513_10005107 3300031456 Bacteria 17372
131 Ga0265313_10152719 3300031595 Bacteria 985
132 Ga0265314_10052148 3300031711 Bacteria 2845
133 Ga0307414_10512070 3300032004 Bacteria 1064
134 Ga0307510_10010353 3300033180 Bacteria 11075
135 Ga0373931_0033062 3300035691 Bacteria 2679
136 Ga0373927_0052196 3300035695 Bacteria 2645
137 Ga0373947_0129647 3300035725 Bacteria 1609
138 Ga0373937_0134191 3300036401 Bacteria 2314
139 Ga0395899_0014220 3300037312 Bacteria 6074
140 Ga0395900_0003059 3300037418 Bacteria 18210
141 Ga0395900_0286278 3300037418 Bacteria 1638
142 Ga0395905_0009494 3300037471 Bacteria 9509
143 Ga0436364_0990934 3300037853 Bacteria 27491
144 Ga0436364_1029268 3300037853 Bacteria 26324
145 Ga0436364_1462694 3300037853 Bacteria 1034
146 Ga0436365_0344683 3300039437 Bacteria 4366
147 Ga0436365_1218224 3300039437 Bacteria 3482
148 Ga0436365_1905412 3300039437 Bacteria 1621
149 Ga0436360_0007799 3300039438 Bacteria 1041
150 Ga0436360_1115509 3300039438 Bacteria 936
151 Ga0436360_1361856 3300039438 Bacteria 3028
152 Ga0436361_0500627 3300039447 Bacteria 1940
153 Ga0436361_0796266 3300039447 Bacteria 1282
154 Ga0436361_0815802 3300039447 Bacteria 3284
155 Ga0436363_0440903 3300039450 Bacteria 1466
156 Ga0439465_0107637 3300041413 Bacteria 968
157 Ga0466969_0005308 3300044656 Bacteria 6856
158 Ga0466957_0080424 3300044842 Bacteria 2029
159 Ga0466960_0270201 3300044901 Bacteria 950
160 Ga0466959_0055512 3300045049 Bacteria 2892
161 Ga0466967_0177858 3300045976 Bacteria 2005
162 Ga0495638_0000009 3300046460 Bacteria 525345
163 Ga0495638_0000052 3300046460 Bacteria 203695
164 Ga0495651_0265292 3300046462 Bacteria 1167
165 Ga0495650_0000122 3300046471 Bacteria 182888
166 Ga0495650_0000247 3300046471 Bacteria 106616
167 Ga0495606_0000056 3300046507 Bacteria 198575
168 Ga0495608_0175943 3300046511 Bacteria 1356
169 Ga0495625_0006824 3300046660 Bacteria 10087
170 Ga0495649_0045084 3300046694 Bacteria 2405
171 Ga0495674_0236627 3300047319 Bacteria 1506
172 Ga0496104_0276983 3300048907 Bacteria 1591
173 Ga0496113_0013707 3300048916 Bacteria 5504
174 Ga0496115_0000013 3300048918 Bacteria 213060
175 Ga0496115_0000044 3300048918 Bacteria 115745
176 Ga0496121_0310940 3300048924 Bacteria 1065
177 Ga0496125_0187638 3300048928 Bacteria 1369
178 Ga0496126_0002266 3300048929 Bacteria 26518
179 Ga0496126_0011072 3300048929 Bacteria 9374
180 Ga0496126_0087347 3300048929 Bacteria 2747
181 Ga0496126_0089846 3300048929 Bacteria 2703
182 Ga0496126_0133900 3300048929 Bacteria 2139
183 Ga0496126_0233751 3300048929 Bacteria 1539
184 Ga0501031_0017200 3300049568 Bacteria 4698
185 Ga0501031_0024766 3300049568 Bacteria 3912
186 Ga0501032_0438585 3300049569 Bacteria 837
187 Ga0501033_0014334 3300049570 Bacteria 6023
188 Ga0501033_0049717 3300049570 Bacteria 3113
189 Ga0501033_0157142 3300049570 Bacteria 1638
190 Ga0501033_0249427 3300049570 Bacteria 1258
191 Ga0501034_0142584 3300049571 Bacteria 2375
192 Ga0501036_0022138 3300049572 Bacteria 5346
193 Ga0501036_0498735 3300049572 Bacteria 1013
194 Ga0501038_0012238 3300049574 Bacteria 7835
195 Ga0501038_0028009 3300049574 Bacteria 5006
196 Ga0501039_0014140 3300049575 Bacteria 6111
197 Ga0501039_0379141 3300049575 Bacteria 1111
198 Ga0501040_0023343 3300049576 Bacteria 4147
199 Ga0501041_0067417 3300049577 Bacteria 2194
200 Ga0501042_0015440 3300049578 Bacteria 5231
201 Ga0501042_0018622 3300049578 Bacteria 4810
202 Ga0501042_0470617 3300049578 Bacteria 912
203 Ga0501043_0009330 3300049579 Bacteria 7710
204 Ga0501043_0122647 3300049579 Bacteria 2038
205 Ga0501046_0015619 3300049580 Bacteria 6375
206 Ga0501046_0044421 3300049580 Bacteria 3534
207 Ga0501047_0004526 3300049581 Bacteria 13067
208 Ga0501047_0064418 3300049581 Bacteria 3535
209 Ga0501048_0005997 3300049582 Bacteria 9257
210 Ga0501048_0019444 3300049582 Bacteria 4982
211 Ga0501068_0041187 3300049584 Bacteria 2775
212 Ga0501069_0036297 3300049585 Bacteria 2718
213 Ga0501070_0240491 3300049586 Bacteria 1482
214 Ga0501071_0004678 3300049587 Bacteria 8697
215 Ga0501072_0028077 3300049588 Bacteria 4393
216 Ga0501072_0177122 3300049588 Bacteria 1701
217 Ga0501072_0217139 3300049588 Bacteria 1524
218 Ga0501072_0273169 3300049588 Bacteria 1345
219 Ga0501073_0025551 3300049589 Bacteria 4233
220 Ga0501073_0332269 3300049589 Bacteria 1049
221 Ga0501075_0030276 3300049591 Bacteria 4008
222 Ga0501076_0071380 3300049592 Bacteria 2778
223 Ga0501077_0201098 3300049593 Bacteria 1266
224 Ga0501080_0043101 3300049742 Bacteria 4201
225 Ga0501081_0040117 3300049743 Bacteria 3205
226 Ga0501083_0002243 3300049744 Bacteria 13202
227 Ga0501035_0013317 3300049822 Bacteria 7589
228 Ga0501035_0038129 3300049822 Bacteria 4351
229 Ga0501035_0348241 3300049822 Bacteria 1240
230 Ga0501044_0049222 3300049823 Bacteria 4351
231 Ga0501044_0052333 3300049823 Bacteria 4208
232 Ga0501044_0150009 3300049823 Bacteria 2314
233 Ga0501044_0455553 3300049823 Bacteria 1185
234 Ga0501044_0830991 3300049823 Bacteria 801
235 nmdc:mga03683_43271_c1 3300050489 Bacteria 1470
236 nmdc:mga0yw44_249819_c1 3300050492 Bacteria 1180
237 nmdc:mga06z11_102169_c1 3300050494 Bacteria 1575
238 nmdc:mga07m45_33645_c1 3300050496 Bacteria 2847
239 nmdc:mga08y16_368634_c1 3300050511 Bacteria 1473
240 nmdc:mga08x19_6_c1 3300050514 Bacteria 405679
241 nmdc:mga0sz30_81161_c1 3300050516 Bacteria 1403
242 Ga0500637_0024179 3300053178 Bacteria 3328
243 Ga0501084_0003455 3300054114 Bacteria 12831
244 Ga0501084_0189700 3300054114 Bacteria 1734
245 Ga0501082_0026891 3300060353 Bacteria 4957
246 Ga0501082_0030220 3300060353 Bacteria 4669
247 Ga0530510_0016121 3300061734 Bacteria 5284

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300026095 Ga0207676_10261161 Ga0207676_102611612 195
2 3300026067 Ga0207678_10120263 Ga0207678_101202634 215
3 3300049593 Ga0501077_0201098 Ga0501077_0201098_32_772 219
4 3300005327 Ga0070658_10098173 Ga0070658_100981733 228
5 3300005335 Ga0070666_10000005 Ga0070666_1000000547 228
6 3300005344 Ga0070661_100023611 Ga0070661_1000236114 228
7 3300005466 Ga0070685_10044709 Ga0070685_100447092 228
8 3300005843 Ga0068860_100166065 Ga0068860_1001660652 228
9 3300005844 Ga0068862_100578920 Ga0068862_1005789202 228
10 3300009551 Ga0105238_10016211 Ga0105238_100162115 228
11 3300013306 Ga0163162_10000281 Ga0163162_1000028119 228
12 3300025903 Ga0207680_10000005 Ga0207680_10000005403 228
13 3300025909 Ga0207705_10099799 Ga0207705_100997993 228
14 3300025920 Ga0207649_10052871 Ga0207649_100528712 228
15 3300025924 Ga0207694_10001048 Ga0207694_1000104822 228
16 3300028381 Ga0268264_10136566 Ga0268264_101365662 228
17 3300033180 Ga0307510_10010353 Ga0307510_100103539 228
18 3300046471 Ga0495650_0000247 Ga0495650_0000247_66394_67146 228
19 3300048928 Ga0496125_0187638 Ga0496125_0187638_460_1212 228
20 3300048929 Ga0496126_0002266 Ga0496126_0002266_15795_16547 228
21 3300006178 Ga0075367_10017517 Ga0075367_100175172 229
22 3300006186 Ga0075369_10091228 Ga0075369_100912282 229
23 3300006195 Ga0075366_10020405 Ga0075366_100204052 229
24 3300028379 Ga0268266_10000004 Ga0268266_100000041127 229
25 3300050494 nmdc:mga06z11_102169_c1 nmdc:mga06z11_102169_c1_59_793 229
26 3300050496 nmdc:mga07m45_33645_c1 nmdc:mga07m45_33645_c1_1699_2433 229
27 3300050516 nmdc:mga0sz30_81161_c1 nmdc:mga0sz30_81161_c1_348_1082 229
28 3300003911 JGI25405J52794_10036456 JGI25405J52794_100364561 233
29 3300005937 Ga0081455_10000835 Ga0081455_1000083554 233
30 3300035691 Ga0373931_0033062 Ga0373931_0033062_378_1103 234
31 3300037312 Ga0395899_0014220 Ga0395899_0014220_3446_4216 234
32 3300037418 Ga0395900_0003059 Ga0395900_0003059_15890_16660 234
33 3300037471 Ga0395905_0009494 Ga0395905_0009494_3748_4518 234
34 3300035695 Ga0373927_0052196 Ga0373927_0052196_1452_2183 235
35 3300005548 Ga0070665_100000912 Ga0070665_10000091225 236
36 3300006038 Ga0075365_10173599 Ga0075365_101735992 236
37 3300006051 Ga0075364_10230810 Ga0075364_102308102 236
38 3300006177 Ga0075362_10037879 Ga0075362_100378792 236
39 3300028379 Ga0268266_10000768 Ga0268266_100007689 236
40 3300041413 Ga0439465_0107637 Ga0439465_0107637_133_867 236
41 3300046660 Ga0495625_0006824 Ga0495625_0006824_4604_5338 236
42 3300049580 Ga0501046_0044421 Ga0501046_0044421_2798_3508 236
43 3300050492 nmdc:mga0yw44_249819_c1 nmdc:mga0yw44_249819_c1_346_1080 236
44 3300050511 nmdc:mga08y16_368634_c1 nmdc:mga08y16_368634_c1_602_1336 236
45 3300002705 JGI25156J39149_1001978 JGI25156J39149_10019787 237
46 3300002737 JGI25162J39368_1000066 JGI25162J39368_100006618 237
47 3300002738 JGI25154J39366_1002914 JGI25154J39366_10029144 237
48 3300002741 JGI25157J39369_1000050 JGI25157J39369_100005018 237
49 3300002771 JGI25163J39215_1000565 JGI25163J39215_10005657 237
50 3300002772 JGI25164J39214_1000056 JGI25164J39214_100005688 237
51 3300003214 JGI25165J46597_1000009 JGI25165J46597_100000918 237
52 3300003751 Ga0055538_1001312 Ga0055538_10013123 237
53 3300003761 Ga0055535_1000045 Ga0055535_100004518 237
54 3300003762 Ga0055542_1000079 Ga0055542_100007918 237
55 3300003763 Ga0055529_1000122 Ga0055529_100012288 237
56 3300005327 Ga0070658_10012119 Ga0070658_100121194 237
57 3300005336 Ga0070680_100078278 Ga0070680_1000782783 237
58 3300005341 Ga0070691_10003143 Ga0070691_100031438 237
59 3300005458 Ga0070681_10011457 Ga0070681_100114575 237
60 3300005530 Ga0070679_100012582 Ga0070679_1000125825 237
61 3300005563 Ga0068855_100010490 Ga0068855_10001049011 237
62 3300005985 Ga0081539_10003370 Ga0081539_100033706 237
63 3300005985 Ga0081539_10202313 Ga0081539_102023132 237
64 3300009093 Ga0105240_10007999 Ga0105240_100079996 237
65 3300009982 Ga0105147_102309 Ga0105147_1023091 237
66 3300014968 Ga0157379_10135405 Ga0157379_101354052 237
67 3300025207 Ga0209760_100572 Ga0209760_1005726 237
68 3300025224 Ga0209784_100013 Ga0209784_100013475 237
69 3300025231 Ga0207427_100030 Ga0207427_100030276 237
70 3300025233 Ga0209437_100012 Ga0209437_100012726 237
71 3300025242 Ga0209258_100019 Ga0209258_10001963 237
72 3300025246 Ga0209646_1000458 Ga0209646_100045811 237
73 3300025250 Ga0209026_1000015 Ga0209026_1000015370 237
74 3300025254 Ga0209148_1000001 Ga0209148_10000012237 237
75 3300025256 Ga0209759_1000023 Ga0209759_1000023230 237
76 3300025261 Ga0209233_1000002 Ga0209233_100000263 237
77 3300025272 Ga0209455_1000027 Ga0209455_1000027483 237
78 3300025909 Ga0207705_10022098 Ga0207705_100220982 237
79 3300025912 Ga0207707_10024634 Ga0207707_100246343 237
80 3300025913 Ga0207695_10040384 Ga0207695_100403846 237
81 3300025917 Ga0207660_10145063 Ga0207660_101450632 237
82 3300025921 Ga0207652_10026698 Ga0207652_100266984 237
83 3300025949 Ga0207667_10020302 Ga0207667_100203027 237
84 3300049568 Ga0501031_0024766 Ga0501031_0024766_1845_2579 237
85 3300049570 Ga0501033_0014334 Ga0501033_0014334_1773_2507 237
86 3300049574 Ga0501038_0012238 Ga0501038_0012238_5257_5991 237
87 3300049578 Ga0501042_0015440 Ga0501042_0015440_661_1395 237
88 3300049578 Ga0501042_0470617 Ga0501042_0470617_59_799 237
89 3300049580 Ga0501046_0015619 Ga0501046_0015619_2327_3061 237
90 3300049582 Ga0501048_0019444 Ga0501048_0019444_2349_3083 237
91 3300049584 Ga0501068_0041187 Ga0501068_0041187_1584_2318 237
92 3300049585 Ga0501069_0036297 Ga0501069_0036297_273_1007 237
93 3300049588 Ga0501072_0177122 Ga0501072_0177122_417_1157 237
94 3300049588 Ga0501072_0217139 Ga0501072_0217139_453_1187 237
95 3300049822 Ga0501035_0038129 Ga0501035_0038129_1773_2507 237
96 3300049823 Ga0501044_0049222 Ga0501044_0049222_1845_2579 237
97 3300049823 Ga0501044_0830991 Ga0501044_0830991_20_754 237
98 3300053178 Ga0500637_0024179 Ga0500637_0024179_403_1161 237
99 3300003760 Ga0055527_1011729 Ga0055527_10117292 238
100 3300025225 Ga0209566_110231 Ga0209566_1102311 238
101 3300025228 Ga0209672_100253 Ga0209672_10025321 238
102 3300025256 Ga0209759_1005828 Ga0209759_10058282 238
103 3300025272 Ga0209455_1006810 Ga0209455_10068102 238
104 3300048929 Ga0496126_0133900 Ga0496126_0133900_997_1743 238
105 3300049577 Ga0501041_0067417 Ga0501041_0067417_118_864 238
106 3300049588 Ga0501072_0273169 Ga0501072_0273169_415_1161 238
107 3300049592 Ga0501076_0071380 Ga0501076_0071380_248_994 238
108 3300002067 JGI24735J21928_10001024 JGI24735J21928_100010249 239
109 3300002067 JGI24735J21928_10059685 JGI24735J21928_100596852 239
110 3300002737 JGI25162J39368_1003666 JGI25162J39368_10036664 239
111 3300003762 Ga0055542_1000010 Ga0055542_1000010260 239
112 3300005327 Ga0070658_10821078 Ga0070658_108210781 239
113 3300005843 Ga0068860_100025258 Ga0068860_1000252582 239
114 3300006177 Ga0075362_10099544 Ga0075362_100995442 239
115 3300013105 Ga0157369_10237510 Ga0157369_102375102 239
116 3300015687 Ga0183368_1004 Ga0183368_1004696 239
117 3300021384 Ga0213876_10016275 Ga0213876_100162754 239
118 3300025206 Ga0209435_105524 Ga0209435_1055242 239
119 3300025233 Ga0209437_100416 Ga0209437_10041615 239
120 3300025242 Ga0209258_106425 Ga0209258_1064252 239
121 3300025250 Ga0209026_1003010 Ga0209026_10030102 239
122 3300025254 Ga0209148_1000005 Ga0209148_100000588 239
123 3300028381 Ga0268264_10184665 Ga0268264_101846652 239
124 3300039437 Ga0436365_0344683 Ga0436365_0344683_348_1079 239
125 3300046460 Ga0495638_0000009 Ga0495638_0000009_262066_262812 239
126 3300046507 Ga0495606_0000056 Ga0495606_0000056_79656_80402 239
127 3300046694 Ga0495649_0045084 Ga0495649_0045084_416_1162 239
128 3300048916 Ga0496113_0013707 Ga0496113_0013707_2170_2916 239
129 3300048918 Ga0496115_0000013 Ga0496115_0000013_114182_114928 239
130 3300048918 Ga0496115_0000044 Ga0496115_0000044_3505_4251 239
131 3300048929 Ga0496126_0011072 Ga0496126_0011072_6708_7454 239
132 3300049575 Ga0501039_0379141 Ga0501039_0379141_129_857 239
133 3300049579 Ga0501043_0009330 Ga0501043_0009330_6939_7667 239
134 3300050489 nmdc:mga03683_43271_c1 nmdc:mga03683_43271_c1_313_1044 239
135 iso_pu_bacteria 2847686936 2847691227 239
136 iso_pu_bacteria 2871444079 2871446480 239
137 iso_pu_bacteria 2922158528 2922163666 239
138 iso_pu_bacteria 2924726620 2924730553 239
139 iso_pu_bacteria 2937891427 2937896073 239
140 iso_pu_bacteria 2965062239 2965066501 239
141 iso_pu_bacteria 2968091066 2968094874 239
142 iso_pu_bacteria 2968128360 2968133555 239
143 iso_pu_bacteria 2996341866 2996344566 239
144 3300045976 Ga0466967_0177858 Ga0466967_0177858_278_1024 240
145 iso_pu_bacteria 2513237087 2513592580 240
146 iso_pu_bacteria 2828305725 2828308521 240
147 iso_pu_bacteria 2882456835 2882458929 240
148 iso_pu_bacteria 2919679072 2919682055 240
149 3300005344 Ga0070661_100034165 Ga0070661_1000341652 241
150 3300005455 Ga0070663_100190072 Ga0070663_1001900722 241
151 3300028381 Ga0268264_10508705 Ga0268264_105087052 241
152 3300046460 Ga0495638_0000052 Ga0495638_0000052_183813_184559 241
153 3300046471 Ga0495650_0000122 Ga0495650_0000122_43966_44712 241
154 3300048907 Ga0496104_0276983 Ga0496104_0276983_476_1222 241
155 3300048929 Ga0496126_0087347 Ga0496126_0087347_1966_2712 241
156 3300049581 Ga0501047_0004526 Ga0501047_0004526_9116_9874 241
157 3300049822 Ga0501035_0013317 Ga0501035_0013317_3806_4564 241
158 3300049823 Ga0501044_0052333 Ga0501044_0052333_2539_3297 241
159 3300005438 Ga0070701_10183219 Ga0070701_101832192 242
160 3300005530 Ga0070679_100422583 Ga0070679_1004225832 242
161 3300009177 Ga0105248_10422393 Ga0105248_104223931 242
162 3300013306 Ga0163162_10135613 Ga0163162_101356132 242
163 3300014325 Ga0163163_10000205 Ga0163163_1000020510 242
164 3300014968 Ga0157379_10024798 Ga0157379_100247982 242
165 3300014969 Ga0157376_10349495 Ga0157376_103494952 242
166 3300025919 Ga0207657_10016660 Ga0207657_100166608 242
167 3300031241 Ga0265325_10000906 Ga0265325_1000090618 242
168 3300031344 Ga0265316_10052866 Ga0265316_100528664 242
169 3300031456 Ga0307513_10005107 Ga0307513_100051075 242
170 3300031595 Ga0265313_10152719 Ga0265313_101527191 242
171 3300036401 Ga0373937_0134191 Ga0373937_0134191_179_931 242
172 3300039438 Ga0436360_0007799 Ga0436360_0007799_182_922 242
173 3300044842 Ga0466957_0080424 Ga0466957_0080424_1045_1851 242
174 3300045049 Ga0466959_0055512 Ga0466959_0055512_190_930 242
175 3300046462 Ga0495651_0265292 Ga0495651_0265292_387_1139 242
176 3300048929 Ga0496126_0089846 Ga0496126_0089846_1444_2214 242
177 3300049570 Ga0501033_0249427 Ga0501033_0249427_263_991 242
178 3300049822 Ga0501035_0348241 Ga0501035_0348241_362_1090 242
179 3300049823 Ga0501044_0150009 Ga0501044_0150009_518_1246 242
180 3300009094 Ga0111539_11261589 Ga0111539_112615891 243
181 3300021361 Ga0213872_10097326 Ga0213872_100973261 243
182 3300039438 Ga0436360_1115509 Ga0436360_1115509_44_787 243
183 3300039447 Ga0436361_0815802 Ga0436361_0815802_409_1152 243
184 3300048924 Ga0496121_0310940 Ga0496121_0310940_60_803 243
185 3300048929 Ga0496126_0233751 Ga0496126_0233751_563_1306 243
186 3300005434 Ga0070709_10189833 Ga0070709_101898332 244
187 3300005536 Ga0070697_100030782 Ga0070697_1000307821 244
188 3300006163 Ga0070715_10053152 Ga0070715_100531522 244
189 3300006173 Ga0070716_100020794 Ga0070716_1000207943 244
190 3300006914 Ga0075436_100001731 Ga0075436_1000017316 244
191 3300021384 Ga0213876_10018209 Ga0213876_100182093 244
192 3300021388 Ga0213875_10000046 Ga0213875_10000046103 244
193 3300024225 Ga0224572_1007131 Ga0224572_10071312 244
194 3300025898 Ga0207692_10071484 Ga0207692_100714842 244
195 3300026078 Ga0207702_10452028 Ga0207702_104520281 244
196 3300031090 Ga0265760_10094595 Ga0265760_100945952 244
197 3300037418 Ga0395900_0286278 Ga0395900_0286278_267_1001 244
198 3300037853 Ga0436364_0990934 Ga0436364_0990934_12675_13433 244
199 3300039437 Ga0436365_1218224 Ga0436365_1218224_1802_2560 244
200 3300039437 Ga0436365_1905412 Ga0436365_1905412_207_965 244
201 3300044901 Ga0466960_0270201 Ga0466960_0270201_68_814 244
202 3300049569 Ga0501032_0438585 Ga0501032_0438585_36_782 244
203 3300049570 Ga0501033_0157142 Ga0501033_0157142_768_1514 244
204 3300049572 Ga0501036_0498735 Ga0501036_0498735_77_823 244
205 3300049581 Ga0501047_0064418 Ga0501047_0064418_582_1328 244
206 3300049586 Ga0501070_0240491 Ga0501070_0240491_560_1306 244
207 3300049823 Ga0501044_0455553 Ga0501044_0455553_391_1137 244
208 3300050514 nmdc:mga08x19_6_c1 nmdc:mga08x19_6_c1_326360_327106 244
209 iso_pu_bacteria 2928963466 2928963874 244
210 iso_pu_bacteria 8004640170 8004644143 244
211 3300005981 Ga0081538_10054336 Ga0081538_100543362 246
212 3300005981 Ga0081538_10193110 Ga0081538_101931101 246
213 3300013296 Ga0157374_10660967 Ga0157374_106609671 246
214 3300021388 Ga0213875_10012270 Ga0213875_100122706 246
215 3300025916 Ga0207663_10397852 Ga0207663_103978522 246
216 3300031711 Ga0265314_10052148 Ga0265314_100521483 246
217 3300032004 Ga0307414_10512070 Ga0307414_105120702 246
218 3300035725 Ga0373947_0129647 Ga0373947_0129647_761_1510 246
219 3300037853 Ga0436364_1029268 Ga0436364_1029268_7645_8394 246
220 3300037853 Ga0436364_1462694 Ga0436364_1462694_14_763 246
221 3300039438 Ga0436360_1361856 Ga0436360_1361856_781_1533 246
222 3300039447 Ga0436361_0500627 Ga0436361_0500627_23_775 246
223 3300039447 Ga0436361_0796266 Ga0436361_0796266_131_880 246
224 3300039450 Ga0436363_0440903 Ga0436363_0440903_663_1412 246
225 3300046511 Ga0495608_0175943 Ga0495608_0175943_564_1313 246
226 3300047319 Ga0495674_0236627 Ga0495674_0236627_521_1270 246
227 3300049568 Ga0501031_0017200 Ga0501031_0017200_1486_2226 246
228 3300049570 Ga0501033_0049717 Ga0501033_0049717_1427_2167 246
229 3300049571 Ga0501034_0142584 Ga0501034_0142584_329_1081 246
230 3300049572 Ga0501036_0022138 Ga0501036_0022138_1609_2349 246
231 3300049574 Ga0501038_0028009 Ga0501038_0028009_2279_3019 246
232 3300049575 Ga0501039_0014140 Ga0501039_0014140_3373_4113 246
233 3300049576 Ga0501040_0023343 Ga0501040_0023343_1382_2122 246
234 3300049578 Ga0501042_0018622 Ga0501042_0018622_2392_3132 246
235 3300049579 Ga0501043_0122647 Ga0501043_0122647_1282_2022 246
236 3300049582 Ga0501048_0005997 Ga0501048_0005997_6851_7591 246
237 3300049587 Ga0501071_0004678 Ga0501071_0004678_7333_8073 246
238 3300049588 Ga0501072_0028077 Ga0501072_0028077_566_1306 246
239 3300049589 Ga0501073_0025551 Ga0501073_0025551_1120_1872 246
240 3300049589 Ga0501073_0332269 Ga0501073_0332269_38_778 246
241 3300049591 Ga0501075_0030276 Ga0501075_0030276_2313_3053 246
242 3300049742 Ga0501080_0043101 Ga0501080_0043101_2028_2768 246
243 3300049743 Ga0501081_0040117 Ga0501081_0040117_2447_3187 246
244 3300049744 Ga0501083_0002243 Ga0501083_0002243_6037_6789 246
245 3300054114 Ga0501084_0003455 Ga0501084_0003455_9125_9865 246
246 3300054114 Ga0501084_0189700 Ga0501084_0189700_961_1713 246
247 3300060353 Ga0501082_0026891 Ga0501082_0026891_4100_4852 246
248 3300060353 Ga0501082_0030220 Ga0501082_0030220_1238_1978 246
249 3300061734 Ga0530510_0016121 Ga0530510_0016121_3472_4212 246
250 3300005436 Ga0070713_100877521 Ga0070713_1008775211 247
251 3300005437 Ga0070710_10520234 Ga0070710_105202341 247
252 3300005445 Ga0070708_100003048 Ga0070708_1000030484 247
253 3300005467 Ga0070706_100026401 Ga0070706_1000264014 247
254 3300005468 Ga0070707_100011840 Ga0070707_1000118402 247
255 3300005983 Ga0081540_1013096 Ga0081540_10130962 247
256 3300025910 Ga0207684_10298090 Ga0207684_102980902 247
257 3300025922 Ga0207646_10027381 Ga0207646_100273812 247
258 3300025922 Ga0207646_10601259 Ga0207646_106012592 247
259 3300001989 JGI24739J22299_10001025 JGI24739J22299_100010258 248
260 3300005365 Ga0070688_100111720 Ga0070688_1001117202 248
261 3300025226 Ga0209674_100063 Ga0209674_100063153 248
262 3300044656 Ga0466969_0005308 Ga0466969_0005308_2236_2982 248

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00106

adh_short

short chain dehydrogenase

53

229

0.92

PF13561

adh_short_C2

Enoyl-(Acyl carrier protein) reductase

58

285

0.88

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

55

201

0.73

Structural Annotation

Top 5 Hits

ID Description Score Start End
2ag5-assembly1.cif.gz_D crystal structure of human dhrs6 0.9368 3 246
6qck-assembly1.cif.gz_A 17beta-hydroxysteroid dehydrogenase 14 variant t205 in complex with fb262 0.9364 4 242
6h0m-assembly1.cif.gz_A 17beta-hydroxysteroid dehydrogenase type 14 mutant k158a in complex with nicotinamide adenine dinucleotide 0.9361 4 242
6gtb-assembly1.cif.gz_A 17beta-hydroxysteroid dehydrogenase 14 variant t205 in complex with fb211 0.9358 4 242
5jsf-assembly1.cif.gz_A crystal structure of 17beta-hydroxysteroid dehydrogenase 14 s205 variant in complex with nad. 0.9335 2 242
ID Description Score Start End Superfamily
2ag5D00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9368 3 246 3.40.50.720
af_A0A0P0Y501_3_211_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9365 5 188 3.40.50.720
2ag5D00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9331 3 246 3.40.50.720
4yqzB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9306 5 242 3.40.50.720
5t2uB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9261 4 243 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A354FJU4-F1-model_v4 NAD(P)-dependent oxidoreductase 0.9662 26 243 GO:0016491
AF-Q8P3K4-F1-model_v4 2-keto-3-deoxy-L-fuconate dehydrogenase (EC 1.1.1.-) 0.9625 2 246 GO:0016491
AF-A0A813AB52-F1-model_v4 deleted 0.9613 1 242
AF-A0A238J0J6-F1-model_v4 2-keto-3-deoxy-L-fuconate dehydrogenase (EC 1.1.1.-) 0.9603 3 242 GO:0016491
AF-A0A7Y7DDR8-F1-model_v4 SDR family oxidoreductase 0.9578 5 242 GO:0016491

Feature Viewer

pLDDT pTM Quality
94.48 0.92 High
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Predicted Structure (AlphaFold2)

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