F371980

General Info

Members Datasets Scaffolds Average Seq Length
263 177 250 258

Family's Representative Sequence

Representative Sequence 3300031731|Ga0307405_10382744|Ga0307405_103827442
Length 257
Sequence VSGLEVQKLSVAIDRAIIVDEVSFKASSGEVVGLIGANGVGKSTLLRGLAGILPATGEVRLDGAAVGALSLKVRARAMAYLPQGQTVHWPIDVHQLVALGRLPHLAPFSRISTADEAAIQAAMDKADVAEFAHREAISLSAGERARVLLARALAVEARVLLADEPTAALDPLHQLHVMQLLRAEAAGGGLVIVVLHDLALAARFCDRLLLMHEGRLVADGAPTEVLTPRNLEETYQVEGYFAAHEGAPIVLPWRPSA

Samples

Sample ID Description Type Environment
1 2510917021 Novosphingobium sp. AP12 Isolate Rhizosphere
2 2512564014 Sphingobium sp. AP49 Isolate Rhizosphere
3 2643221563 Sphingopyxis sp. Root154 Isolate Unclassified
4 2643221608 Sphingopyxis sp. Root214 Isolate Unclassified
5 2808606401 Sphingobium sp. AEW010 Isolate Rhizosphere
6 2808606404 Sphingobium sp. AEW013 Isolate Rhizosphere
7 2808606405 Sphingobium sp. AEW001 Isolate Rhizosphere
8 2818991438 Novosphingobium barchaimii 1192 Isolate Unclassified
9 2852653556 Sphingopyxis sp. JAI108 Isolate Rhizosphere
10 2880518877 Sphingobium sp. JAI105 Isolate Rhizosphere
11 2885429604 Sphingomonas sp. WZY 27 Isolate Rhizosphere
12 2919709256 Sphingobium xenophagum 4256 Isolate Unclassified
13 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
14 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
15 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
16 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
17 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
18 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
19 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
20 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
21 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
22 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
23 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
24 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
25 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
26 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
27 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
28 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
29 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
30 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
31 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
32 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
33 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
34 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
35 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
36 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
37 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
38 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
39 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
40 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
41 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
42 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
43 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
44 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
45 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
46 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
47 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
48 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
49 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
50 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
51 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
52 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
53 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
54 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
55 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
56 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
57 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
58 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
59 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
60 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
61 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
62 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
63 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
64 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
65 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
66 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
67 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
68 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
69 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
70 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
72 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
73 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
96 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
97 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
99 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
100 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
101 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
102 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
103 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
104 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
105 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
106 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
107 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
108 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
109 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
110 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
111 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
112 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
113 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
114 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
115 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
116 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
117 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
118 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
119 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
120 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
121 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
122 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
123 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
124 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
125 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
126 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
127 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
128 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
129 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
130 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
131 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
132 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
133 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
134 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
135 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
136 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
137 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
138 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
139 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
140 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
141 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
142 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
143 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
144 3300049517 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G24_B_5_control Metagenome Rhizosphere
145 3300049523 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control Metagenome Rhizosphere
146 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
147 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
148 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
149 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
150 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
152 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
153 3300049653 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_A_0_control Metagenome Rhizosphere
154 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
155 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
156 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
157 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
158 3300049775 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_A_5_drought Metagenome Rhizosphere
159 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
160 3300049777 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G24_A_5_control Metagenome Rhizosphere
161 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
162 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
163 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
164 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
165 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
166 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
167 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
168 3300053116 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 endosphere Metagenome Endosphere
169 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
170 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
171 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
172 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
173 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
174 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
175 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
176 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
177 8054302542 Novosphingobium kaempferiae Sx8-5 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.06
Metatranscriptomes 0
Isolates 4.94

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 27
Nodule 1.14
Rhizoplane 2.66
Rhizosphere 56.65
Stem 0
Stem Tuber 0
Unclassified 12.55

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24741J21665_1000026 3300001915 Bacteria 35267
2 JGI24740J21852_10001292 3300001979 Bacteria 11377
3 JGI24739J22299_10001495 3300001989 Bacteria 8828
4 JGI24737J22298_10000940 3300001990 Bacteria 10319
5 JGI24735J21928_10001790 3300002067 Bacteria 7539
6 JGI24738J21930_10001463 3300002075 Bacteria 6561
7 JGI25150J39212_1000288 3300002774 Bacteria 26051
8 JGI25153J46596_10000028 3300003215 Bacteria 209842
9 rootH2_10068622 3300003320 Bacteria 1877
10 Ga0055526_1004603 3300003771 Bacteria 8224
11 Ga0055537_1003037 3300003773 Bacteria 5299
12 Ga0055530_10000137 3300003791 Bacteria 64770
13 Ga0055530_10003629 3300003791 Bacteria 8661
14 Ga0055540_1004355 3300003792 Bacteria 6423
15 Ga0055531_10001890 3300003794 Bacteria 14669
16 Ga0055531_10004584 3300003794 Bacteria 8338
17 Ga0055531_10026546 3300003794 Bacteria 2062
18 Ga0055531_10026548 3300003794 Bacteria 2062
19 Ga0065165_1000840 3300005262 Bacteria 40310
20 Ga0065165_1020588 3300005262 Bacteria 2317
21 Ga0070658_10033407 3300005327 Bacteria 4138
22 Ga0070666_10015734 3300005335 Bacteria 4830
23 Ga0070680_100139268 3300005336 Bacteria 2034
24 Ga0070661_100391749 3300005344 Bacteria 1097
25 Ga0070668_100000099 3300005347 Bacteria 52778
26 Ga0070669_100037784 3300005353 Bacteria 3503
27 Ga0070671_100101633 3300005355 Bacteria 2412
28 Ga0070667_100000038 3300005367 Bacteria 171914
29 Ga0070667_100195283 3300005367 Bacteria 1794
30 Ga0070685_10010119 3300005466 Bacteria 4894
31 Ga0068853_100018934 3300005539 Bacteria 5702
32 Ga0068855_100000377 3300005563 Bacteria 55242
33 Ga0068854_100007276 3300005578 Bacteria 7070
34 Ga0068856_100034368 3300005614 Bacteria 4965
35 Ga0068864_100108952 3300005618 Bacteria 2465
36 Ga0068851_10102968 3300005834 Bacteria 1516
37 Ga0068863_100000255 3300005841 Bacteria 55911
38 Ga0068860_100005836 3300005843 Bacteria 12392
39 Ga0075368_10000147 3300006042 Bacteria 18758
40 Ga0075363_100041623 3300006048 Bacteria 2424
41 Ga0075367_10000607 3300006178 Bacteria 13767
42 Ga0079104_1003536 3300006946 Bacteria 7190
43 Ga0079104_1032086 3300006946 Bacteria 1298
44 Ga0105240_10003584 3300009093 Bacteria 24088
45 Ga0105241_10001330 3300009174 Bacteria 18768
46 Ga0105248_10006425 3300009177 Bacteria 12894
47 Ga0105237_10040476 3300009545 Bacteria 4700
48 Ga0105249_10289891 3300009553 Bacteria 1638
49 Ga0105239_10226771 3300010375 Bacteria 2096
50 Ga0157373_10010820 3300013100 Bacteria 6715
51 Ga0157371_10063727 3300013102 Bacteria 2613
52 Ga0157369_10105076 3300013105 Bacteria 3006
53 Ga0163161_10192133 3300017792 Bacteria 1570
54 Ga0163161_10221180 3300017792 Bacteria 1466
55 Ga0213874_10008664 3300021377 Bacteria 2487
56 Ga0207425_1000005 3300025245 Bacteria 900502
57 Ga0209129_1000228 3300025258 Bacteria 63465
58 Ga0209565_1000180 3300025263 Bacteria 78672
59 Ga0209565_1025490 3300025263 Bacteria 1195
60 Ga0209565_1027227 3300025263 Bacteria 1139
61 Ga0209673_1032730 3300025273 Bacteria 1598
62 Ga0209130_1000125 3300025284 Bacteria 124425
63 Ga0209675_1000198 3300025291 Bacteria 64334
64 Ga0209676_1000211 3300025292 Bacteria 129654
65 Ga0209676_1001492 3300025292 Bacteria 21515
66 Ga0209676_1008039 3300025292 Bacteria 4799
67 Ga0209676_1011704 3300025292 Bacteria 3511
68 Ga0209676_1019351 3300025292 Bacteria 2343
69 Ga0209025_1000296 3300025294 Bacteria 111440
70 Ga0209025_1064049 3300025294 Bacteria 1353
71 Ga0209564_1000680 3300025295 Bacteria 50194
72 Ga0209564_1010074 3300025295 Bacteria 4405
73 Ga0209758_1000002 3300025297 Bacteria 1400310
74 Ga0209758_1017100 3300025297 Bacteria 3636
75 Ga0209050_1000001 3300025298 Bacteria 3563507
76 Ga0209050_1000047 3300025298 Bacteria 380561
77 Ga0209050_1000059 3300025298 Bacteria 325258
78 Ga0209050_1001924 3300025298 Bacteria 19785
79 Ga0209050_1014027 3300025298 Bacteria 3494
80 Ga0209050_1015771 3300025298 Bacteria 3146
81 Ga0207426_1004700 3300025302 Bacteria 6535
82 Ga0209051_1000193 3300025303 Bacteria 108391
83 Ga0209051_1035571 3300025303 Bacteria 1851
84 Ga0209257_1000076 3300025304 Bacteria 324617
85 Ga0209257_1000404 3300025304 Bacteria 83872
86 Ga0209257_1000874 3300025304 Bacteria 42712
87 Ga0209257_1000917 3300025304 Bacteria 41014
88 Ga0207656_10007853 3300025321 Bacteria 3906
89 Ga0207705_10167992 3300025909 Bacteria 1651
90 Ga0207654_10043085 3300025911 Bacteria 2557
91 Ga0207695_10017352 3300025913 Bacteria 8377
92 Ga0207695_10163427 3300025913 Bacteria 2156
93 Ga0207671_10049351 3300025914 Bacteria 3116
94 Ga0207660_10271443 3300025917 Bacteria 1344
95 Ga0207650_10072406 3300025925 Bacteria 2594
96 Ga0207644_10027862 3300025931 Bacteria 3905
97 Ga0207706_10010249 3300025933 Bacteria 8570
98 Ga0207711_10008482 3300025941 Bacteria 8599
99 Ga0207667_10000537 3300025949 Bacteria 50070
100 Ga0207712_10175405 3300025961 Bacteria 1679
101 Ga0207668_10000589 3300025972 Bacteria 22573
102 Ga0207640_10157911 3300025981 Bacteria 1674
103 Ga0207658_10000029 3300025986 Bacteria 171928
104 Ga0207639_10000252 3300026041 Bacteria 39391
105 Ga0207639_10013499 3300026041 Bacteria 5720
106 Ga0207678_10000857 3300026067 Bacteria 27922
107 Ga0207641_10000343 3300026088 Bacteria 56041
108 Ga0207676_10110196 3300026095 Bacteria 2302
109 Ga0207674_10025014 3300026116 Bacteria 6373
110 Ga0207698_10182544 3300026142 Bacteria 1860
111 Ga0209281_1007229 3300027111 Bacteria 2801
112 Ga0209813_10000075 3300027866 Bacteria 36981
113 Ga0268264_10006822 3300028381 Bacteria 9592
114 Ga0307513_10276021 3300031456 Bacteria 1461
115 Ga0307408_100018615 3300031548 Bacteria 4665
116 Ga0307408_100491300 3300031548 Bacteria 1073
117 Ga0307405_10032057 3300031731 Bacteria 3101
118 Ga0307405_10070969 3300031731 Bacteria 2239
119 Ga0307405_10382744 3300031731 Bacteria 1096
120 Ga0307410_10039489 3300031852 Bacteria 3099
121 Ga0307412_10014433 3300031911 Bacteria 4660
122 Ga0307412_10017148 3300031911 Bacteria 4330
123 Ga0307412_10050297 3300031911 Bacteria 2750
124 Ga0307414_10000112 3300032004 Bacteria 57809
125 Ga0307414_10010332 3300032004 Bacteria 5410
126 Ga0307414_10024353 3300032004 Bacteria 3859
127 Ga0307414_10065766 3300032004 Bacteria 2588
128 Ga0307414_10709345 3300032004 Bacteria 911
129 Ga0307411_10010750 3300032005 Bacteria 4898
130 Ga0307411_10102605 3300032005 Bacteria 2027
131 Ga0307510_10009543 3300033180 Bacteria 11563
132 Ga0436363_1554739 3300039450 Bacteria 3752
133 Ga0451807_0153394 3300041486 Bacteria 1070
134 Ga0495627_001305 3300046453 Bacteria 15206
135 Ga0495650_0000782 3300046471 Bacteria 39029
136 Ga0495650_0006348 3300046471 Bacteria 7387
137 Ga0495596_0001982 3300046500 Bacteria 11280
138 Ga0495607_0073390 3300046501 Bacteria 1902
139 Ga0495583_0027425 3300046506 Bacteria 2811
140 Ga0495610_0000052 3300046512 Bacteria 143261
141 Ga0495616_0000015 3300046513 Bacteria 187751
142 Ga0495620_0115084 3300046515 Bacteria 1063
143 Ga0495632_0000007 3300046519 Bacteria 343246
144 Ga0495632_0000662 3300046519 Bacteria 31571
145 Ga0495637_0002730 3300046520 Bacteria 9617
146 Ga0495643_0000304 3300046522 Bacteria 68483
147 Ga0495643_0014614 3300046522 Bacteria 4667
148 Ga0495663_0000005 3300046525 Bacteria 342265
149 Ga0495654_0009200 3300046530 Bacteria 5417
150 Ga0495654_0010310 3300046530 Bacteria 5086
151 Ga0495654_0012096 3300046530 Bacteria 4645
152 Ga0495609_0007243 3300046538 Bacteria 5563
153 Ga0495633_0002794 3300046558 Bacteria 12067
154 Ga0495633_0012261 3300046558 Bacteria 4569
155 Ga0495668_0000024 3300046616 Bacteria 359469
156 Ga0495668_0001490 3300046616 Bacteria 22423
157 Ga0495625_0000841 3300046660 Bacteria 42026
158 Ga0495625_0014182 3300046660 Bacteria 6373
159 Ga0495625_0219659 3300046660 Bacteria 1246
160 Ga0495671_0000126 3300046692 Bacteria 68483
161 Ga0495671_0055681 3300046692 Bacteria 1959
162 Ga0495673_0028133 3300047469 Bacteria 2666
163 Ga0495673_0111969 3300047469 Bacteria 1090
164 Ga0495681_0000012 3300047470 Bacteria 200275
165 Ga0495681_0005798 3300047470 Bacteria 8206
166 Ga0495686_0000147 3300047472 Bacteria 139008
167 Ga0495686_0002468 3300047472 Bacteria 17425
168 Ga0495686_0004643 3300047472 Bacteria 11162
169 Ga0495686_0019165 3300047472 Bacteria 4576
170 Ga0495686_0039662 3300047472 Bacteria 3006
171 Ga0495686_0201934 3300047472 Bacteria 1140
172 Ga0495615_0000286 3300048090 Bacteria 9008
173 Ga0496102_0091299 3300048905 Bacteria 2819
174 Ga0496108_0043425 3300048911 Bacteria 3755
175 Ga0496109_0358757 3300048912 Bacteria 1377
176 Ga0496110_0030059 3300048913 Bacteria 4681
177 Ga0496111_0024660 3300048914 Bacteria 4239
178 Ga0496115_0010547 3300048918 Bacteria 6909
179 Ga0496116_0000116 3300048919 Bacteria 172374
180 Ga0496118_0121801 3300048921 Bacteria 1698
181 Ga0496121_0002261 3300048924 Bacteria 29984
182 Ga0496121_0041132 3300048924 Bacteria 4045
183 Ga0496122_0000745 3300048925 Bacteria 63497
184 Ga0496122_0004170 3300048925 Bacteria 18218
185 Ga0496122_0017425 3300048925 Bacteria 6717
186 Ga0496122_0223924 3300048925 Bacteria 1076
187 Ga0496123_0002386 3300048926 Bacteria 23531
188 Ga0496123_0006708 3300048926 Bacteria 11089
189 Ga0496123_0182510 3300048926 Bacteria 1094
190 Ga0496124_0001758 3300048927 Bacteria 30259
191 Ga0496124_0008532 3300048927 Bacteria 10696
192 Ga0496124_0023451 3300048927 Bacteria 5633
193 Ga0496124_0069830 3300048927 Bacteria 2915
194 Ga0496125_0008850 3300048928 Bacteria 10464
195 Ga0496125_0015219 3300048928 Bacteria 7449
196 Ga0496125_0041477 3300048928 Bacteria 3933
197 Ga0496125_0077627 3300048928 Bacteria 2559
198 Ga0496125_0099996 3300048928 Bacteria 2139
199 Ga0496125_0118543 3300048928 Bacteria 1895
200 Ga0496125_0197428 3300048928 Bacteria 1321
201 Ga0496125_0287623 3300048928 Bacteria 1014
202 Ga0496126_0002818 3300048929 Bacteria 22809
203 Ga0501294_000497 3300049517 Bacteria 4600
204 Ga0501300_003986 3300049523 Bacteria 2197
205 Ga0501032_0003515 3300049569 Bacteria 11970
206 Ga0501033_0002144 3300049570 Bacteria 17070
207 Ga0501033_0008700 3300049570 Bacteria 7851
208 Ga0501034_0018815 3300049571 Bacteria 7079
209 Ga0501036_0003745 3300049572 Bacteria 12185
210 Ga0501037_0032598 3300049573 Bacteria 3847
211 Ga0501039_0003879 3300049575 Bacteria 11223
212 Ga0501043_0053823 3300049579 Bacteria 3160
213 Ga0501043_0081813 3300049579 Bacteria 2538
214 Ga0501206_002450 3300049653 Bacteria 2343
215 Ga0501223_000039 3300049663 Bacteria 45537
216 Ga0501227_003413 3300049665 Bacteria 3444
217 Ga0501235_002503 3300049669 Bacteria 3958
218 Ga0501225_0000010 3300049705 Bacteria 82395
219 Ga0501225_0004725 3300049705 Bacteria 4040
220 Ga0501225_0005164 3300049705 Bacteria 3845
221 Ga0501279_000140 3300049775 Bacteria 10345
222 Ga0501280_000421 3300049776 Bacteria 10157
223 Ga0501281_00217 3300049777 Bacteria 6499
224 Ga0501035_0003659 3300049822 Bacteria 14662
225 Ga0501035_0445972 3300049822 Bacteria 1071
226 Ga0501044_0000995 3300049823 Bacteria 34093
227 Ga0501044_0033594 3300049823 Bacteria 5389
228 nmdc:mga03n38_25189_c1 3300050490 Bacteria 2440
229 nmdc:mga06z11_17_c1 3300050494 Bacteria 79602
230 nmdc:mga04h51_23_c1 3300050495 Bacteria 63511
231 nmdc:mga09592_121830_c1 3300050508 Bacteria 2240
232 Ga0500643_000311 3300053087 Bacteria 39950
233 Ga0500643_000822 3300053087 Bacteria 20046
234 Ga0500643_003598 3300053087 Bacteria 7365
235 Ga0500643_010728 3300053087 Bacteria 3390
236 Ga0500643_017887 3300053087 Bacteria 2362
237 Ga0500592_000047 3300053116 Bacteria 36285
238 Ga0500592_000743 3300053116 Bacteria 5330
239 Ga0500592_001702 3300053116 Bacteria 3566
240 Ga0500607_000021 3300053121 Bacteria 99974
241 Ga0500658_0133558 3300053134 Bacteria 1109
242 Ga0500559_0000514 3300053136 Bacteria 27170
243 Ga0500559_0034391 3300053136 Bacteria 2186
244 Ga0500568_0013909 3300053139 Bacteria 3653
245 Ga0500622_0000582 3300053156 Bacteria 33085
246 Ga0500624_000066 3300053157 Bacteria 62660
247 Ga0500627_0000008 3300053158 Bacteria 161914
248 Ga0500627_0000410 3300053158 Bacteria 11568
249 Ga0500627_0000940 3300053158 Bacteria 7856
250 Ga0500645_026795 3300053730 Bacteria 1752

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 iso_pu_bacteria 2885429604 2885431776 251
2 iso_pu_bacteria 2512564014 2512645472 253
3 iso_pu_bacteria 2643221563 2643833675 253
4 iso_pu_bacteria 2643221608 2644054602 253
5 iso_pu_bacteria 2808606401 2809062569 253
6 iso_pu_bacteria 2808606404 2809078747 253
7 iso_pu_bacteria 2808606405 2809082958 253
8 iso_pu_bacteria 2880518877 2880521626 253
9 iso_pu_bacteria 8054302542 8054305641 253
10 iso_pu_bacteria 2852653556 2852656572 254
11 iso_pu_bacteria 2510917021 2511128302 255
12 iso_pu_bacteria 2818991438 2819551775 255
13 iso_pu_bacteria 2919709256 2919712081 255
14 3300032004 Ga0307414_10000112 Ga0307414_1000011239 256
15 3300041486 Ga0451807_0153394 Ga0451807_0153394_206_979 256
16 3300002774 JGI25150J39212_1000288 JGI25150J39212_10002887 257
17 3300003215 JGI25153J46596_10000028 JGI25153J46596_10000028188 257
18 3300003771 Ga0055526_1004603 Ga0055526_10046034 257
19 3300003773 Ga0055537_1003037 Ga0055537_10030372 257
20 3300003791 Ga0055530_10000137 Ga0055530_1000013757 257
21 3300003791 Ga0055530_10003629 Ga0055530_100036293 257
22 3300003792 Ga0055540_1004355 Ga0055540_10043556 257
23 3300003794 Ga0055531_10001890 Ga0055531_100018907 257
24 3300003794 Ga0055531_10004584 Ga0055531_100045845 257
25 3300003794 Ga0055531_10026546 Ga0055531_100265462 257
26 3300003794 Ga0055531_10026548 Ga0055531_100265482 257
27 3300005262 Ga0065165_1000840 Ga0065165_100084028 257
28 3300005262 Ga0065165_1020588 Ga0065165_10205882 257
29 3300006042 Ga0075368_10000147 Ga0075368_100001478 257
30 3300006048 Ga0075363_100041623 Ga0075363_1000416232 257
31 3300006178 Ga0075367_10000607 Ga0075367_100006076 257
32 3300006946 Ga0079104_1003536 Ga0079104_10035363 257
33 3300017792 Ga0163161_10221180 Ga0163161_102211802 257
34 3300025245 Ga0207425_1000005 Ga0207425_1000005184 257
35 3300025258 Ga0209129_1000228 Ga0209129_100022832 257
36 3300025263 Ga0209565_1000180 Ga0209565_100018042 257
37 3300025263 Ga0209565_1025490 Ga0209565_10254902 257
38 3300025263 Ga0209565_1027227 Ga0209565_10272271 257
39 3300025273 Ga0209673_1032730 Ga0209673_10327301 257
40 3300025291 Ga0209675_1000198 Ga0209675_100019831 257
41 3300025292 Ga0209676_1000211 Ga0209676_100021154 257
42 3300025292 Ga0209676_1001492 Ga0209676_100149218 257
43 3300025292 Ga0209676_1008039 Ga0209676_10080395 257
44 3300025292 Ga0209676_1011704 Ga0209676_10117043 257
45 3300025292 Ga0209676_1019351 Ga0209676_10193512 257
46 3300025294 Ga0209025_1000296 Ga0209025_100029687 257
47 3300025294 Ga0209025_1064049 Ga0209025_10640492 257
48 3300025295 Ga0209564_1000680 Ga0209564_10006805 257
49 3300025295 Ga0209564_1010074 Ga0209564_10100743 257
50 3300025297 Ga0209758_1000002 Ga0209758_10000021160 257
51 3300025297 Ga0209758_1017100 Ga0209758_10171002 257
52 3300025298 Ga0209050_1000001 Ga0209050_10000011148 257
53 3300025298 Ga0209050_1000047 Ga0209050_1000047239 257
54 3300025298 Ga0209050_1001924 Ga0209050_100192412 257
55 3300025298 Ga0209050_1014027 Ga0209050_10140273 257
56 3300025298 Ga0209050_1015771 Ga0209050_10157712 257
57 3300025303 Ga0209051_1000193 Ga0209051_100019323 257
58 3300025303 Ga0209051_1035571 Ga0209051_10355712 257
59 3300025304 Ga0209257_1000076 Ga0209257_1000076195 257
60 3300025304 Ga0209257_1000404 Ga0209257_100040447 257
61 3300025304 Ga0209257_1000874 Ga0209257_100087413 257
62 3300025304 Ga0209257_1000917 Ga0209257_100091713 257
63 3300027111 Ga0209281_1007229 Ga0209281_10072292 257
64 3300027866 Ga0209813_10000075 Ga0209813_1000007530 257
65 3300031456 Ga0307513_10276021 Ga0307513_102760212 257
66 3300031548 Ga0307408_100491300 Ga0307408_1004913002 257
67 3300031731 Ga0307405_10382744 Ga0307405_103827442 257
68 3300031911 Ga0307412_10014433 Ga0307412_100144333 257
69 3300032004 Ga0307414_10709345 Ga0307414_107093451 257
70 3300032005 Ga0307411_10010750 Ga0307411_100107502 257
71 3300046530 Ga0495654_0010310 Ga0495654_0010310_2103_2876 257
72 3300046616 Ga0495668_0000024 Ga0495668_0000024_294870_295643 257
73 3300046660 Ga0495625_0000841 Ga0495625_0000841_40619_41392 257
74 3300047469 Ga0495673_0028133 Ga0495673_0028133_747_1520 257
75 3300047472 Ga0495686_0000147 Ga0495686_0000147_13309_14082 257
76 3300048090 Ga0495615_0000286 Ga0495615_0000286_8183_8956 257
77 3300048918 Ga0496115_0010547 Ga0496115_0010547_4694_5467 257
78 3300048925 Ga0496122_0017425 Ga0496122_0017425_2210_2983 257
79 3300048926 Ga0496123_0006708 Ga0496123_0006708_10227_11000 257
80 3300048927 Ga0496124_0023451 Ga0496124_0023451_2196_2969 257
81 3300048928 Ga0496125_0287623 Ga0496125_0287623_226_999 257
82 3300049569 Ga0501032_0003515 Ga0501032_0003515_56_829 257
83 3300049570 Ga0501033_0002144 Ga0501033_0002144_10215_10988 257
84 3300049570 Ga0501033_0008700 Ga0501033_0008700_5747_6520 257
85 3300049572 Ga0501036_0003745 Ga0501036_0003745_426_1199 257
86 3300049573 Ga0501037_0032598 Ga0501037_0032598_2032_2805 257
87 3300049575 Ga0501039_0003879 Ga0501039_0003879_4899_5672 257
88 3300049579 Ga0501043_0081813 Ga0501043_0081813_765_1538 257
89 3300049822 Ga0501035_0003659 Ga0501035_0003659_8361_9134 257
90 3300049822 Ga0501035_0445972 Ga0501035_0445972_195_968 257
91 3300049823 Ga0501044_0000995 Ga0501044_0000995_25295_26068 257
92 3300050490 nmdc:mga03n38_25189_c1 nmdc:mga03n38_25189_c1_1111_1884 257
93 3300050494 nmdc:mga06z11_17_c1 nmdc:mga06z11_17_c1_57173_57946 257
94 3300050495 nmdc:mga04h51_23_c1 nmdc:mga04h51_23_c1_26028_26801 257
95 3300050508 nmdc:mga09592_121830_c1 nmdc:mga09592_121830_c1_326_1099 257
96 3300053087 Ga0500643_010728 Ga0500643_010728_1388_2161 257
97 3300053116 Ga0500592_000047 Ga0500592_000047_8822_9595 257
98 3300053134 Ga0500658_0133558 Ga0500658_0133558_248_1021 257
99 3300053139 Ga0500568_0013909 Ga0500568_0013909_2094_2867 257
100 3300053156 Ga0500622_0000582 Ga0500622_0000582_10404_11177 257
101 3300053158 Ga0500627_0000410 Ga0500627_0000410_6414_7187 257
102 3300003320 rootH2_10068622 rootH2_100686222 258
103 3300005335 Ga0070666_10015734 Ga0070666_100157343 258
104 3300005336 Ga0070680_100139268 Ga0070680_1001392682 258
105 3300005344 Ga0070661_100391749 Ga0070661_1003917491 258
106 3300005347 Ga0070668_100000099 Ga0070668_10000009920 258
107 3300005353 Ga0070669_100037784 Ga0070669_1000377842 258
108 3300005367 Ga0070667_100000038 Ga0070667_100000038147 258
109 3300005539 Ga0068853_100018934 Ga0068853_1000189343 258
110 3300005563 Ga0068855_100000377 Ga0068855_10000037730 258
111 3300005578 Ga0068854_100007276 Ga0068854_1000072765 258
112 3300005841 Ga0068863_100000255 Ga0068863_10000025521 258
113 3300005843 Ga0068860_100005836 Ga0068860_10000583611 258
114 3300009093 Ga0105240_10003584 Ga0105240_1000358420 258
115 3300009177 Ga0105248_10006425 Ga0105248_100064258 258
116 3300010375 Ga0105239_10226771 Ga0105239_102267713 258
117 3300021377 Ga0213874_10008664 Ga0213874_100086642 258
118 3300025284 Ga0209130_1000125 Ga0209130_100012533 258
119 3300025302 Ga0207426_1004700 Ga0207426_10047002 258
120 3300025913 Ga0207695_10017352 Ga0207695_100173528 258
121 3300025917 Ga0207660_10271443 Ga0207660_102714432 258
122 3300025941 Ga0207711_10008482 Ga0207711_100084829 258
123 3300025949 Ga0207667_10000537 Ga0207667_1000053720 258
124 3300025972 Ga0207668_10000589 Ga0207668_1000058920 258
125 3300025986 Ga0207658_10000029 Ga0207658_10000029145 258
126 3300026041 Ga0207639_10013499 Ga0207639_100134993 258
127 3300026088 Ga0207641_10000343 Ga0207641_1000034321 258
128 3300028381 Ga0268264_10006822 Ga0268264_100068225 258
129 3300031911 Ga0307412_10017148 Ga0307412_100171484 258
130 3300032004 Ga0307414_10010332 Ga0307414_100103322 258
131 3300032004 Ga0307414_10024353 Ga0307414_100243534 258
132 3300039450 Ga0436363_1554739 Ga0436363_1554739_476_1267 258
133 3300046471 Ga0495650_0006348 Ga0495650_0006348_928_1704 258
134 3300046501 Ga0495607_0073390 Ga0495607_0073390_79_855 258
135 3300046513 Ga0495616_0000015 Ga0495616_0000015_18142_18918 258
136 3300046519 Ga0495632_0000007 Ga0495632_0000007_274592_275368 258
137 3300046520 Ga0495637_0002730 Ga0495637_0002730_8749_9525 258
138 3300046522 Ga0495643_0000304 Ga0495643_0000304_122_898 258
139 3300046525 Ga0495663_0000005 Ga0495663_0000005_273611_274387 258
140 3300046530 Ga0495654_0009200 Ga0495654_0009200_1443_2219 258
141 3300046558 Ga0495633_0012261 Ga0495633_0012261_1758_2534 258
142 3300046616 Ga0495668_0001490 Ga0495668_0001490_1622_2398 258
143 3300046660 Ga0495625_0219659 Ga0495625_0219659_459_1235 258
144 3300046692 Ga0495671_0000126 Ga0495671_0000126_67586_68362 258
145 3300047469 Ga0495673_0111969 Ga0495673_0111969_280_1056 258
146 3300047470 Ga0495681_0005798 Ga0495681_0005798_7357_8133 258
147 3300047472 Ga0495686_0019165 Ga0495686_0019165_3318_4094 258
148 3300048928 Ga0496125_0197428 Ga0496125_0197428_468_1244 258
149 3300049517 Ga0501294_000497 Ga0501294_000497_630_1406 258
150 3300049523 Ga0501300_003986 Ga0501300_003986_366_1142 258
151 3300049571 Ga0501034_0018815 Ga0501034_0018815_3405_4187 258
152 3300049579 Ga0501043_0053823 Ga0501043_0053823_151_933 258
153 3300049653 Ga0501206_002450 Ga0501206_002450_76_852 258
154 3300049665 Ga0501227_003413 Ga0501227_003413_815_1591 258
155 3300049669 Ga0501235_002503 Ga0501235_002503_998_1774 258
156 3300049705 Ga0501225_0004725 Ga0501225_0004725_2189_2965 258
157 3300049775 Ga0501279_000140 Ga0501279_000140_4722_5498 258
158 3300049776 Ga0501280_000421 Ga0501280_000421_4661_5437 258
159 3300049777 Ga0501281_00217 Ga0501281_00217_1094_1870 258
160 3300049823 Ga0501044_0033594 Ga0501044_0033594_2983_3765 258
161 3300053087 Ga0500643_000311 Ga0500643_000311_13285_14061 258
162 3300053087 Ga0500643_000822 Ga0500643_000822_1729_2505 258
163 3300053087 Ga0500643_003598 Ga0500643_003598_1137_1913 258
164 3300053087 Ga0500643_017887 Ga0500643_017887_611_1387 258
165 3300053116 Ga0500592_000743 Ga0500592_000743_1652_2428 258
166 3300053116 Ga0500592_001702 Ga0500592_001702_1407_2183 258
167 3300053136 Ga0500559_0000514 Ga0500559_0000514_13356_14132 258
168 3300053158 Ga0500627_0000008 Ga0500627_0000008_37586_38362 258
169 3300053158 Ga0500627_0000940 Ga0500627_0000940_1630_2406 258
170 3300001915 JGI24741J21665_1000026 JGI24741J21665_100002615 259
171 3300001979 JGI24740J21852_10001292 JGI24740J21852_100012927 259
172 3300001989 JGI24739J22299_10001495 JGI24739J22299_100014954 259
173 3300001990 JGI24737J22298_10000940 JGI24737J22298_100009406 259
174 3300002067 JGI24735J21928_10001790 JGI24735J21928_100017909 259
175 3300002075 JGI24738J21930_10001463 JGI24738J21930_100014636 259
176 3300005327 Ga0070658_10033407 Ga0070658_100334074 259
177 3300005355 Ga0070671_100101633 Ga0070671_1001016332 259
178 3300005367 Ga0070667_100195283 Ga0070667_1001952832 259
179 3300005466 Ga0070685_10010119 Ga0070685_100101194 259
180 3300005614 Ga0068856_100034368 Ga0068856_1000343685 259
181 3300005618 Ga0068864_100108952 Ga0068864_1001089522 259
182 3300005834 Ga0068851_10102968 Ga0068851_101029682 259
183 3300006946 Ga0079104_1032086 Ga0079104_10320861 259
184 3300009174 Ga0105241_10001330 Ga0105241_100013308 259
185 3300009545 Ga0105237_10040476 Ga0105237_100404762 259
186 3300009553 Ga0105249_10289891 Ga0105249_102898912 259
187 3300013100 Ga0157373_10010820 Ga0157373_100108202 259
188 3300013102 Ga0157371_10063727 Ga0157371_100637272 259
189 3300013105 Ga0157369_10105076 Ga0157369_101050762 259
190 3300017792 Ga0163161_10192133 Ga0163161_101921332 259
191 3300025298 Ga0209050_1000059 Ga0209050_1000059257 259
192 3300025321 Ga0207656_10007853 Ga0207656_100078532 259
193 3300025909 Ga0207705_10167992 Ga0207705_101679922 259
194 3300025911 Ga0207654_10043085 Ga0207654_100430852 259
195 3300025913 Ga0207695_10163427 Ga0207695_101634272 259
196 3300025914 Ga0207671_10049351 Ga0207671_100493512 259
197 3300025925 Ga0207650_10072406 Ga0207650_100724062 259
198 3300025931 Ga0207644_10027862 Ga0207644_100278622 259
199 3300025933 Ga0207706_10010249 Ga0207706_100102498 259
200 3300025961 Ga0207712_10175405 Ga0207712_101754052 259
201 3300025981 Ga0207640_10157911 Ga0207640_101579112 259
202 3300026041 Ga0207639_10000252 Ga0207639_1000025233 259
203 3300026067 Ga0207678_10000857 Ga0207678_100008574 259
204 3300026095 Ga0207676_10110196 Ga0207676_101101962 259
205 3300026116 Ga0207674_10025014 Ga0207674_100250142 259
206 3300026142 Ga0207698_10182544 Ga0207698_101825442 259
207 3300031548 Ga0307408_100018615 Ga0307408_1000186154 259
208 3300031731 Ga0307405_10032057 Ga0307405_100320572 259
209 3300031731 Ga0307405_10070969 Ga0307405_100709692 259
210 3300031852 Ga0307410_10039489 Ga0307410_100394892 259
211 3300031911 Ga0307412_10050297 Ga0307412_100502972 259
212 3300032004 Ga0307414_10065766 Ga0307414_100657662 259
213 3300032005 Ga0307411_10102605 Ga0307411_101026052 259
214 3300033180 Ga0307510_10009543 Ga0307510_100095432 259
215 3300046453 Ga0495627_001305 Ga0495627_001305_10086_10868 259
216 3300046471 Ga0495650_0000782 Ga0495650_0000782_35225_36007 259
217 3300046500 Ga0495596_0001982 Ga0495596_0001982_7743_8531 259
218 3300046506 Ga0495583_0027425 Ga0495583_0027425_317_1105 259
219 3300046512 Ga0495610_0000052 Ga0495610_0000052_50741_51523 259
220 3300046515 Ga0495620_0115084 Ga0495620_0115084_188_970 259
221 3300046519 Ga0495632_0000662 Ga0495632_0000662_1583_2365 259
222 3300046522 Ga0495643_0014614 Ga0495643_0014614_2771_3559 259
223 3300046530 Ga0495654_0012096 Ga0495654_0012096_3614_4396 259
224 3300046538 Ga0495609_0007243 Ga0495609_0007243_2698_3486 259
225 3300046558 Ga0495633_0002794 Ga0495633_0002794_2553_3332 259
226 3300046660 Ga0495625_0014182 Ga0495625_0014182_2738_3526 259
227 3300046692 Ga0495671_0055681 Ga0495671_0055681_25_813 259
228 3300047470 Ga0495681_0000012 Ga0495681_0000012_158822_159604 259
229 3300047472 Ga0495686_0002468 Ga0495686_0002468_14494_15273 259
230 3300047472 Ga0495686_0004643 Ga0495686_0004643_6866_7672 259
231 3300047472 Ga0495686_0039662 Ga0495686_0039662_1840_2622 259
232 3300047472 Ga0495686_0201934 Ga0495686_0201934_312_1118 259
233 3300048905 Ga0496102_0091299 Ga0496102_0091299_1543_2322 259
234 3300048911 Ga0496108_0043425 Ga0496108_0043425_108_887 259
235 3300048912 Ga0496109_0358757 Ga0496109_0358757_150_929 259
236 3300048913 Ga0496110_0030059 Ga0496110_0030059_2202_2981 259
237 3300048914 Ga0496111_0024660 Ga0496111_0024660_1322_2101 259
238 3300048919 Ga0496116_0000116 Ga0496116_0000116_21321_22100 259
239 3300048921 Ga0496118_0121801 Ga0496118_0121801_309_1088 259
240 3300048924 Ga0496121_0002261 Ga0496121_0002261_3384_4163 259
241 3300048924 Ga0496121_0041132 Ga0496121_0041132_685_1464 259
242 3300048925 Ga0496122_0000745 Ga0496122_0000745_31343_32122 259
243 3300048925 Ga0496122_0004170 Ga0496122_0004170_8308_9087 259
244 3300048925 Ga0496122_0223924 Ga0496122_0223924_15_794 259
245 3300048926 Ga0496123_0002386 Ga0496123_0002386_20850_21629 259
246 3300048926 Ga0496123_0182510 Ga0496123_0182510_96_875 259
247 3300048927 Ga0496124_0001758 Ga0496124_0001758_1874_2653 259
248 3300048927 Ga0496124_0008532 Ga0496124_0008532_4222_5001 259
249 3300048927 Ga0496124_0069830 Ga0496124_0069830_1874_2653 259
250 3300048928 Ga0496125_0008850 Ga0496125_0008850_6762_7541 259
251 3300048928 Ga0496125_0015219 Ga0496125_0015219_6530_7309 259
252 3300048928 Ga0496125_0041477 Ga0496125_0041477_2686_3480 259
253 3300048928 Ga0496125_0077627 Ga0496125_0077627_1046_1831 259
254 3300048928 Ga0496125_0099996 Ga0496125_0099996_459_1238 259
255 3300048928 Ga0496125_0118543 Ga0496125_0118543_287_1072 259
256 3300048929 Ga0496126_0002818 Ga0496126_0002818_20708_21487 259
257 3300049663 Ga0501223_000039 Ga0501223_000039_33705_34484 259
258 3300049705 Ga0501225_0000010 Ga0501225_0000010_57373_58152 259
259 3300049705 Ga0501225_0005164 Ga0501225_0005164_1290_2069 259
260 3300053121 Ga0500607_000021 Ga0500607_000021_71052_71855 259
261 3300053136 Ga0500559_0034391 Ga0500559_0034391_1139_1930 259
262 3300053157 Ga0500624_000066 Ga0500624_000066_25239_26024 259
263 3300053730 Ga0500645_026795 Ga0500645_026795_65_844 259

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00005

ABC_tran

ABC transporter

19

167

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
5b57-assembly1.cif.gz_C inward-facing conformation of abc heme importer bhuuv from burkholderia cenocepacia 0.9068 4 254
4yer-assembly1.cif.gz_B crystal structure of an abc transporter atp-binding protein (tm_1403) from thermotoga maritima msb8 at 2.35 a resolution 0.9062 4 226
3c41-assembly1.cif.gz_K abc protein artp in complex with amp-pnp/mg2+ 0.9042 4 226
5b57-assembly1.cif.gz_D inward-facing conformation of abc heme importer bhuuv from burkholderia cenocepacia 0.9037 4 254
5b58-assembly1.cif.gz_C inward-facing conformation of abc heme importer bhuuv in complex with periplasmic heme binding protein bhut from burkholderia cenocepacia 0.9034 4 254
ID Description Score Start End Superfamily
af_Q57554_4_248_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9446 1 244 3.40.50.300
af_Q2G072_1_252_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9387 4 253 3.40.50.300
af_A0A1D6Q2V7_231_304_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9282 3 66 3.40.50.300
af_P23878_8_259_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9275 5 252 3.40.50.300
af_Q2G072_1_252_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9244 4 253 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A842PJX0-F1-model_v4 ATP-binding cassette domain-containing protein 0.9361 110 254 GO:0005524
GO:0016887
AF-A0A7V0ML42-F1-model_v4 ABC transporter ATP-binding protein 0.9357 2 235 GO:0005524
GO:0016887
AF-A0A3D0QFL5-F1-model_v4 Iron ABC transporter ATP-binding protein 0.9241 2 254 GO:0005524
GO:0016887
AF-A0A355GT67-F1-model_v4 ABC transporter domain-containing protein 0.9239 1 244 GO:0005524
GO:0016887
AF-A0A6I5GCS9-F1-model_v4 deleted 0.9203 80 255

Feature Viewer

pLDDT pTM Quality
94.29 0.91 High
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Predicted Structure (AlphaFold2)

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