F372010

General Info

Members Datasets Scaffolds Average Seq Length
263 189 526 871

Family's Representative Sequence

Representative Sequence 3300037068|Ga0373925_0006339|Ga0373925_0006339_3421_6567
Length 1034
Sequence VRLIEVRRLSGPNVYLRRPVTVARLELDELTGHETTSHAGFAGRLTGLLPGLADHHCAAGRPGGFLDAMARGTYFGHVTEHVALELSGLAGRPAYFGRTEWAGADGRYDVVMECPQDEPLDSPVPRDLLMLAIGVVTGVLAERDPRPDAALMAITRAVEEGRLGVSTAALAEAARRRGIPARRAGGLSLLRLGYGCHRRLVWAALTEQTSAVGVDIASDKQLAKQLLADAGVPVPAGALARSAAEAAEAFTRIGGPAVVKPRRGNHGASVSVGITSADEAAEAYRRAATIGPEVIVEAYIPGRDYRVLVVDGRLVAAAQLRPASVTGDGSRDIAALVARANTDPRRGDGHARPLTRIVLDSETLGRLAAQGLSPQSVPGPGQVIHLRGNANLSTGGTSTDVTDLVHPEVATMCCRAAAAAGLDVCGLDVRLTDISAPLHGDADSGRDAGGALPGAVIELNACPGLRMHLAPSAGRPRDVAGPIIDRLYPPGVPARIPIVSVTGTNGKTTTVRMISQILRQAGLRVGMTTTDGVHLGGQLVRATDASGPRSAEMVLGDPTVEAAVLETARGGIIRRGLGYDQADVAVLTNITADHLGMDVAEEIRRGGTVVLNADDPRTAAIAGRPAVRRRQPVIRYFGLDGRNPVMVAHRMAGGITCELRGTDLVEARGGEETLLLSVADIPGSFGGAASYLVANALAAVSACRALGVSVKDIQRALATFTPVQANPGRGNIYQVAGCPVIVDYGHNAAALAAMGRLLREAWDGEPVAAVTLPGDRRDDLVAETAGSVAAWFSRVVVYEDNDLRGRQPGEMARLISQALARQRPGIRIVPAAGPDQALRHALGLAGPGDPVLFLYEKLAPVHTVLGSLGAVAWPPDAAASDVLGQPARSAGRRDHPLGHGLLTELVRVHGEGGRGRGHAFHPPDARPLADVVADAGRVGVHVGRPVGGGLGGEHLVQFLFHPAQVGHVAVGDGHGRPAAVAGVRQEVRIPHHQHPRLRCPLVDALKHRGHLGRGLADGLRQLISPARGVGVLAR

Samples

Sample ID Description Type Environment
1 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
2 3300002739 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA Metagenome Endosphere
3 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
4 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
5 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
6 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
7 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
8 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
9 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
10 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
11 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
12 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
13 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
14 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
15 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
16 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
17 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
18 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
19 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
20 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
21 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
22 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
23 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
24 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
25 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
26 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
27 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
28 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
29 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
30 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
32 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
33 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
34 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
35 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
36 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
37 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
38 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
39 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
40 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
41 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
42 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
51 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
54 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
55 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
56 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
57 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
58 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
59 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
60 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
61 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
62 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
63 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
64 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
65 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
66 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
67 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
68 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
69 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
70 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
71 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
72 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
73 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
74 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
75 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
76 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
77 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
78 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
79 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
80 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
81 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
82 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
83 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
84 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
85 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
86 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
87 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
88 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
89 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
90 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
91 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
92 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
93 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
94 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
95 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
96 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
97 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
98 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
99 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
100 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
101 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
102 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
103 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
104 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
105 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
106 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
107 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
108 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
109 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
110 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
111 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
112 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
113 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
114 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
115 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
116 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
117 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
118 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
119 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
120 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
121 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
122 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
123 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
124 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
125 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
126 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
127 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
128 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
129 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
130 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
131 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
134 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
143 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
144 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
145 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
146 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
147 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
148 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
149 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
150 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
151 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
152 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
153 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
154 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
155 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
156 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
157 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
158 2521172590 Herbaspirillum sp. GW103 Isolate Rhizosphere
159 2551306416 Herbaspirillum seropedicae Os34 Isolate Unclassified
160 2643221560 Sphingopyxis sp. Root1497 Isolate Unclassified
161 2643221563 Sphingopyxis sp. Root154 Isolate Unclassified
162 2643221608 Sphingopyxis sp. Root214 Isolate Unclassified
163 2739367655 Pusillimonas sp. YR330 Isolate Unclassified
164 2818991449 Herbaspirillum huttiense 1147 Isolate Unclassified
165 2852653556 Sphingopyxis sp. JAI108 Isolate Rhizosphere
166 2852680915 Sphingopyxis sp. JAI128 Isolate Rhizosphere
167 2855730933 Achromobacter sp. HZ28 Isolate Nodule
168 2855767633 Achromobacter sp. HZ34 Isolate Nodule
169 2856741275 Microbispora triticiradicis NEAU-HRDPA2-9 Isolate Unclassified
170 2857737099 Lysinimonas sp. R-73066 Isolate Unclassified
171 2861520306 Phytomonospora endophytica DSM 45386 Isolate Unclassified
172 2881412998 Achromobacter aloeverae AVA-1 Isolate Unclassified
173 2881927736 Candidimonas sp. SYP-B2681 Isolate Rhizosphere
174 2891562705 Microbispora tritici MT50 Isolate Unclassified
175 2904439833 Herbaspirillum sp. 1589 Isolate Rhizosphere
176 2904530477 Herbaspirillum huttiense 611 Isolate Unclassified
177 2904584206 Herbaspirillum sp. 1050 Isolate Unclassified
178 2904589729 Herbaspirillum sp. 1130 Isolate Unclassified
179 2904601388 Herbaspirillum sp. 1273 Isolate Rhizosphere
180 2919046199 Herbaspirillum frisingense 596 Isolate Unclassified
181 2919079590 Herbaspirillum sp. 1173 Isolate Unclassified
182 2919138771 Novosphingobium sp. 1748 Isolate Rhizosphere
183 2919476304 Duganella sp. 3397 Isolate Unclassified
184 2923510766 Herbaspirillum rubrisubalbicans SLBN-127 Isolate Rhizosphere
185 2928130867 Herbaspirillum seropedicae 1977 Isolate Unclassified
186 2984568884 Acinetobacter baylyi SORGH_AS893 Isolate Aerial Root
187 8007375930 Clostridium sp. YIM B02565 Isolate Unclassified
188 8053945823 Actinomadura terrae OS3-83 Isolate Rhizosphere
189 8055225921 Achromobacter panacis KCTC 42751 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 87.45
Metatranscriptomes 0
Isolates 12.55

Biome Distribution

Category Percentage (%)
Aerial Root 0.38
Bulb 0
Endosphere 9.13
Nodule 0.76
Rhizoplane 1.14
Rhizosphere 79.47
Stem 0
Stem Tuber 0
Unclassified 0.76

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0373925_0006339 3300037068 Bacteria 8711
2 JGI25158J39367_1001631 3300002739 Bacteria 3867
3 JGI25150J39212_1001453 3300002774 Bacteria 6606
4 JGI25151J46595_10001497 3300003187 Bacteria 15697
5 Ga0055538_1000002 3300003751 Bacteria 999437
6 Ga0055539_1000002 3300003752 Bacteria 999437
7 Ga0055533_1000004 3300003756 Bacteria 999437
8 Ga0055525_1000002 3300003759 Bacteria 999437
9 Ga0055526_1000158 3300003771 Bacteria 60304
10 Ga0055536_1005424 3300003781 Bacteria 6237
11 Ga0055541_1000002 3300003841 Bacteria 896405
12 Ga0065165_1000759 3300005262 Bacteria 43896
13 Ga0070658_10043933 3300005327 Bacteria 3610
14 Ga0070669_100000033 3300005353 Bacteria 144544
15 Ga0070714_100016596 3300005435 Bacteria 5950
16 Ga0070713_100016619 3300005436 Bacteria 5535
17 Ga0070694_100021566 3300005444 Unclassified 4119
18 Ga0070708_100020332 3300005445 Bacteria 5596
19 Ga0070706_100001451 3300005467 Bacteria 24949
20 Ga0070706_100004244 3300005467 Bacteria 13910
21 Ga0070706_100007541 3300005467 Bacteria 10194
22 Ga0070706_100009467 3300005467 Bacteria 9062
23 Ga0070706_100009657 3300005467 Bacteria 8969
24 Ga0070707_100000401 3300005468 Bacteria 42604
25 Ga0070707_100003984 3300005468 Bacteria 13900
26 Ga0070707_100045459 3300005468 Bacteria 4203
27 Ga0070698_100000080 3300005471 Bacteria 73829
28 Ga0070698_100000919 3300005471 Bacteria 32170
29 Ga0070698_100013258 3300005471 Bacteria 8722
30 Ga0068853_100078227 3300005539 Bacteria 2890
31 Ga0070665_100000247 3300005548 Bacteria 89526
32 Ga0068855_100001741 3300005563 Bacteria 27181
33 Ga0068862_100000587 3300005844 Bacteria 37854
34 Ga0081455_10003617 3300005937 Bacteria 17713
35 Ga0081539_10000227 3300005985 Bacteria 132022
36 Ga0081539_10001922 3300005985 Bacteria 32066
37 Ga0075436_100008706 3300006914 Bacteria 6938
38 Ga0105240_10078125 3300009093 Bacteria 4076
39 Ga0111539_10018253 3300009094 Bacteria 8688
40 Ga0213872_10000489 3300021361 Bacteria 31637
41 Ga0213872_10000666 3300021361 Bacteria 26015
42 Ga0213872_10008098 3300021361 Bacteria 5105
43 Ga0209784_100002 3300025224 Bacteria 1753105
44 Ga0209566_100003 3300025225 Bacteria 1753105
45 Ga0209674_100004 3300025226 Bacteria 1753105
46 Ga0209563_100006 3300025230 Bacteria 1753105
47 Ga0209677_100003 3300025253 Bacteria 1753105
48 Ga0209675_1000126 3300025291 Bacteria 104792
49 Ga0209675_1006055 3300025291 Bacteria 4937
50 Ga0209676_1000566 3300025292 Bacteria 55814
51 Ga0209676_1003810 3300025292 Bacteria 8901
52 Ga0209676_1007298 3300025292 Bacteria 5229
53 Ga0209025_1000040 3300025294 Bacteria 376228
54 Ga0209050_1000047 3300025298 Bacteria 380561
55 Ga0209257_1006912 3300025304 Bacteria 7099
56 Ga0207699_10009298 3300025906 Bacteria 4887
57 Ga0207684_10002011 3300025910 Bacteria 20947
58 Ga0207684_10003476 3300025910 Bacteria 15368
59 Ga0207684_10005846 3300025910 Bacteria 11266
60 Ga0207646_10000691 3300025922 Bacteria 43602
61 Ga0207646_10016083 3300025922 Bacteria 7030
62 Ga0207646_10017259 3300025922 Bacteria 6760
63 Ga0207681_10000011 3300025923 Bacteria 366878
64 Ga0207700_10028495 3300025928 Bacteria 3927
65 Ga0207664_10010438 3300025929 Bacteria 6558
66 Ga0207667_10000036 3300025949 Bacteria 297966
67 Ga0207639_10072380 3300026041 Bacteria 2699
68 Ga0207428_10004218 3300027907 Bacteria 13757
69 Ga0268266_10003325 3300028379 Bacteria 16133
70 Ga0268265_10000991 3300028380 Bacteria 25781
71 Ga0265337_1000065 3300028556 Bacteria 48676
72 Ga0265326_10000501 3300028558 Bacteria 15115
73 Ga0265319_1000617 3300028563 Bacteria 23460
74 Ga0265334_10000297 3300028573 Bacteria 27857
75 Ga0265323_10003947 3300028653 Bacteria 6446
76 Ga0265323_10010588 3300028653 Bacteria 3735
77 Ga0265322_10001790 3300028654 Bacteria 6814
78 Ga0265336_10000183 3300028666 Bacteria 44089
79 Ga0265338_10004585 3300028800 Bacteria 18587
80 Ga0265338_10028927 3300028800 Bacteria 5512
81 Ga0307511_10001691 3300030521 Bacteria 23234
82 Ga0265330_10000638 3300031235 Bacteria 22519
83 Ga0265330_10002110 3300031235 Bacteria 10983
84 Ga0265330_10013614 3300031235 Bacteria 3788
85 Ga0265332_10000970 3300031238 Bacteria 16966
86 Ga0265320_10001169 3300031240 Bacteria 19320
87 Ga0265329_10000527 3300031242 Bacteria 19724
88 Ga0265316_10000051 3300031344 Bacteria 126739
89 Ga0265316_10000776 3300031344 Bacteria 35252
90 Ga0265316_10004594 3300031344 Bacteria 13702
91 Ga0265316_10011551 3300031344 Bacteria 7952
92 Ga0307513_10007311 3300031456 Bacteria 14340
93 Ga0307509_10000105 3300031507 Bacteria 119065
94 Ga0265314_10005850 3300031711 Bacteria 11011
95 Ga0265342_10002045 3300031712 Bacteria 17936
96 Ga0265342_10003074 3300031712 Bacteria 13958
97 Ga0307411_10009798 3300032005 Bacteria 5064
98 Ga0373929_0000005 3300035085 Bacteria 354831
99 Ga0373952_0001530 3300035092 Bacteria 4210
100 Ga0373953_0001855 3300035117 Bacteria 6256
101 Ga0373961_0001073 3300035241 Bacteria 8765
102 Ga0373924_0001819 3300035410 Bacteria 7049
103 Ga0373935_0009759 3300035692 Bacteria 5749
104 Ga0373935_0028302 3300035692 Bacteria 3463
105 Ga0373947_0000031 3300035725 Bacteria 73833
106 Ga0373937_0019160 3300036401 Bacteria 6124
107 Ga0373937_0028270 3300036401 Bacteria 5072
108 Ga0373925_0002974 3300037068 Bacteria 13381
109 Ga0373925_0023166 3300037068 Bacteria 4531
110 Ga0395899_0001415 3300037312 Bacteria 20577
111 Ga0436361_0458802 3300039447 Bacteria 7439
112 Ga0436361_0504982 3300039447 Bacteria 102576
113 Ga0436361_0560696 3300039447 Bacteria 5389
114 Ga0436361_0863669 3300039447 Bacteria 11816
115 Ga0451577_0000013 3300042876 Bacteria 550689
116 Ga0451577_0001782 3300042876 Bacteria 27637
117 Ga0451577_0044327 3300042876 Bacteria 3983
118 Ga0453683_0000059 3300044673 Bacteria 187158
119 Ga0466964_0000845 3300044706 Bacteria 10027
120 Ga0453684_0000585 3300044712 Bacteria 135647
121 Ga0453684_0000989 3300044712 Bacteria 92793
122 Ga0453684_0003502 3300044712 Bacteria 35240
123 Ga0453684_0031465 3300044712 Bacteria 7456
124 Ga0466957_0026296 3300044842 Bacteria 3452
125 Ga0466959_0041010 3300045049 Bacteria 3419
126 Ga0451576_0000018 3300045051 Bacteria 550689
127 Ga0451576_0003177 3300045051 Bacteria 22950
128 Ga0451576_0026161 3300045051 Bacteria 6277
129 Ga0451576_0057083 3300045051 Bacteria 4081
130 Ga0495627_000055 3300046453 Bacteria 149482
131 Ga0495592_0011603 3300046454 Bacteria 6673
132 Ga0495629_0002932 3300046459 Bacteria 13014
133 Ga0495638_0000091 3300046460 Bacteria 146548
134 Ga0495651_0004544 3300046462 Bacteria 10611
135 Ga0495651_0011181 3300046462 Bacteria 6901
136 Ga0495653_0003312 3300046463 Bacteria 12932
137 Ga0495653_0014937 3300046463 Bacteria 6333
138 Ga0495653_0043122 3300046463 Bacteria 3509
139 Ga0495650_0000576 3300046471 Bacteria 51317
140 Ga0495582_0001383 3300046473 Bacteria 13653
141 Ga0495662_0002389 3300046476 Bacteria 9440
142 Ga0495583_0000197 3300046506 Bacteria 101236
143 Ga0495606_0008922 3300046507 Bacteria 8587
144 Ga0495608_0002075 3300046511 Bacteria 14432
145 Ga0495608_0006925 3300046511 Bacteria 8028
146 Ga0495616_0006613 3300046513 Bacteria 7001
147 Ga0495630_0029809 3300046517 Bacteria 4057
148 Ga0495643_0000287 3300046522 Bacteria 72080
149 Ga0495643_0001068 3300046522 Bacteria 27300
150 Ga0495643_0006208 3300046522 Bacteria 7927
151 Ga0495648_0000058 3300046524 Bacteria 156717
152 Ga0495642_0002279 3300046528 Bacteria 7827
153 Ga0495652_0033107 3300046529 Bacteria 4516
154 Ga0495587_0010943 3300046536 Bacteria 5754
155 Ga0495597_0000700 3300046542 Bacteria 26805
156 Ga0495645_0050721 3300046543 Bacteria 3020
157 Ga0495633_0000362 3300046558 Bacteria 48938
158 Ga0495667_0000184 3300046559 Bacteria 42368
159 Ga0495667_0004900 3300046559 Bacteria 9048
160 Ga0495668_0000150 3300046616 Bacteria 105516
161 Ga0495634_0008426 3300046642 Bacteria 7675
162 Ga0495625_0000132 3300046660 Bacteria 115728
163 Ga0495635_0016175 3300046663 Bacteria 5207
164 Ga0495657_0004818 3300046675 Bacteria 10758
165 Ga0495657_0005833 3300046675 Bacteria 9694
166 Ga0495657_0014710 3300046675 Bacteria 5742
167 Ga0495646_0007922 3300046680 Bacteria 6749
168 Ga0495658_0003499 3300046683 Bacteria 7772
169 Ga0495581_0001474 3300047315 Bacteria 13090
170 Ga0495604_0006255 3300047317 Bacteria 9443
171 Ga0495680_0003776 3300047322 Bacteria 14733
172 Ga0495680_0008637 3300047322 Bacteria 9247
173 Ga0495680_0016111 3300047322 Bacteria 6426
174 Ga0495687_002443 3300047443 Bacteria 14923
175 Ga0495687_011344 3300047443 Bacteria 4801
176 Ga0495675_0003296 3300047444 Bacteria 9706
177 Ga0495593_0002084 3300047673 Bacteria 11958
178 Ga0495602_0027267 3300048088 Bacteria 5492
179 Ga0495602_0050730 3300048088 Bacteria 3704
180 Ga0495626_0000122 3300048091 Bacteria 101672
181 Ga0496109_0000100 3300048912 Bacteria 89897
182 Ga0496109_0000879 3300048912 Bacteria 25064
183 Ga0496110_0000615 3300048913 Bacteria 24551
184 Ga0496124_0006318 3300048927 Bacteria 12939
185 Ga0495678_000980 3300049459 Bacteria 24522
186 Ga0495678_009571 3300049459 Bacteria 4783
187 Ga0501031_0001344 3300049568 Bacteria 15143
188 Ga0501032_0003669 3300049569 Bacteria 11678
189 Ga0501033_0000507 3300049570 Bacteria 36643
190 Ga0501033_0007319 3300049570 Bacteria 8606
191 Ga0501034_0008897 3300049571 Bacteria 10552
192 Ga0501034_0029749 3300049571 Bacteria 5553
193 Ga0501036_0000319 3300049572 Bacteria 33522
194 Ga0501037_0001674 3300049573 Bacteria 16119
195 Ga0501037_0007703 3300049573 Bacteria 7881
196 Ga0501037_0019415 3300049573 Bacteria 5013
197 Ga0501038_0001134 3300049574 Bacteria 24160
198 Ga0501038_0031116 3300049574 Bacteria 4718
199 Ga0501042_0014890 3300049578 Bacteria 5315
200 Ga0501043_0000090 3300049579 Bacteria 81336
201 Ga0501043_0002846 3300049579 Bacteria 14452
202 Ga0501043_0003803 3300049579 Bacteria 12412
203 Ga0501046_0000126 3300049580 Bacteria 81334
204 Ga0501046_0004743 3300049580 Bacteria 12270
205 Ga0501047_0000160 3300049581 Bacteria 81946
206 Ga0501047_0003924 3300049581 Bacteria 13979
207 Ga0501047_0006791 3300049581 Bacteria 10752
208 Ga0501047_0007578 3300049581 Bacteria 10217
209 Ga0501047_0028271 3300049581 Bacteria 5405
210 Ga0501047_0043177 3300049581 Bacteria 4355
211 Ga0501048_0000040 3300049582 Bacteria 63031
212 Ga0501073_0058219 3300049589 Bacteria 2701
213 Ga0501074_0005629 3300049590 Bacteria 9024
214 Ga0501077_0000256 3300049593 Bacteria 31435
215 Ga0501202_001206 3300049652 Bacteria 4079
216 Ga0501227_003786 3300049665 Bacteria 3271
217 Ga0501080_0006528 3300049742 Bacteria 10479
218 Ga0501083_0003603 3300049744 Bacteria 10861
219 Ga0501280_001419 3300049776 Bacteria 4454
220 Ga0501035_0013183 3300049822 Bacteria 7629
221 Ga0501044_0000160 3300049823 Bacteria 83543
222 Ga0501044_0000322 3300049823 Bacteria 60519
223 Ga0501044_0004052 3300049823 Bacteria 16437
224 Ga0501044_0014736 3300049823 Bacteria 8429
225 nmdc:mga06r32_5092_c2 3300050510 Bacteria 7975
226 nmdc:mga06r32_7773_c1 3300050510 Bacteria 9638
227 nmdc:mga08x19_11231_c1 3300050514 Bacteria 5391
228 nmdc:mga0a205_17763_c1 3300050515 Unclassified 3158
229 Ga0495612_0002189 3300053078 Bacteria 8039
230 Ga0501082_0000043 3300060353 Bacteria 89262
231 2521558128 2521172590 Bacteria 5047645
232 2553003254 2551306416 Bacteria 6152985
233 2643822610 2643221560 Bacteria 4801179
234 2643823185 2643221560 Bacteria 4801179
235 2643834167 2643221563 Bacteria 4726935
236 2644055092 2643221608 Bacteria 4724829
237 2739613705 2739367655 Bacteria 4051151
238 2819614728 2818991449 Bacteria 5518009
239 2852656809 2852653556 Bacteria 4050083
240 2852682009 2852680915 Bacteria 4100189
241 2855736582 2855730933 Bacteria 7047938
242 2855773519 2855767633 Bacteria 7049357
243 2856745686 2856741275 Bacteria 8096094
244 2857739605 2857737099 Bacteria 3104305
245 2861522139 2861520306 Bacteria 8348283
246 2881418489 2881412998 Bacteria 6492157
247 2881928783 2881927736 Bacteria 3993927
248 2891569484 2891562705 Bacteria 8039471
249 2904441097 2904439833 Bacteria 5931679
250 2904531960 2904530477 Bacteria 5876334
251 2904587814 2904584206 Bacteria 6028872
252 2904590026 2904589729 Bacteria 6113573
253 2904602586 2904601388 Bacteria 5884906
254 2919046592 2919046199 Bacteria 5567169
255 2919079908 2919079590 Bacteria 5946433
256 2919142351 2919138771 Bacteria 5281312
257 2919478755 2919476304 Bacteria 5888696
258 2923511376 2923510766 Bacteria 5926163
259 2928131308 2928130867 Bacteria 5467269
260 2984569097 2984568884 Bacteria 3884413
261 8007378358 8007375930 Bacteria 4080554
262 8053952914 8053945823 Bacteria 8962862
263 8055226832 8055225921 Bacteria 3341787
264 Ga0373925_0006339
265 JGI25158J39367_1001631
266 JGI25150J39212_1001453
267 JGI25151J46595_10001497
268 Ga0055538_1000002
269 Ga0055539_1000002
270 Ga0055533_1000004
271 Ga0055525_1000002
272 Ga0055526_1000158
273 Ga0055536_1005424
274 Ga0055541_1000002
275 Ga0065165_1000759
276 Ga0070658_10043933
277 Ga0070669_100000033
278 Ga0070714_100016596
279 Ga0070713_100016619
280 Ga0070694_100021566
281 Ga0070708_100020332
282 Ga0070706_100001451
283 Ga0070706_100004244
284 Ga0070706_100007541
285 Ga0070706_100009467
286 Ga0070706_100009657
287 Ga0070707_100000401
288 Ga0070707_100003984
289 Ga0070707_100045459
290 Ga0070698_100000080
291 Ga0070698_100000919
292 Ga0070698_100013258
293 Ga0068853_100078227
294 Ga0070665_100000247
295 Ga0068855_100001741
296 Ga0068862_100000587
297 Ga0081455_10003617
298 Ga0081539_10000227
299 Ga0081539_10001922
300 Ga0075436_100008706
301 Ga0105240_10078125
302 Ga0111539_10018253
303 Ga0213872_10000489
304 Ga0213872_10000666
305 Ga0213872_10008098
306 Ga0209784_100002
307 Ga0209566_100003
308 Ga0209674_100004
309 Ga0209563_100006
310 Ga0209677_100003
311 Ga0209675_1000126
312 Ga0209675_1006055
313 Ga0209676_1000566
314 Ga0209676_1003810
315 Ga0209676_1007298
316 Ga0209025_1000040
317 Ga0209050_1000047
318 Ga0209257_1006912
319 Ga0207699_10009298
320 Ga0207684_10002011
321 Ga0207684_10003476
322 Ga0207684_10005846
323 Ga0207646_10000691
324 Ga0207646_10016083
325 Ga0207646_10017259
326 Ga0207681_10000011
327 Ga0207700_10028495
328 Ga0207664_10010438
329 Ga0207667_10000036
330 Ga0207639_10072380
331 Ga0207428_10004218
332 Ga0268266_10003325
333 Ga0268265_10000991
334 Ga0265337_1000065
335 Ga0265326_10000501
336 Ga0265319_1000617
337 Ga0265334_10000297
338 Ga0265323_10003947
339 Ga0265323_10010588
340 Ga0265322_10001790
341 Ga0265336_10000183
342 Ga0265338_10004585
343 Ga0265338_10028927
344 Ga0307511_10001691
345 Ga0265330_10000638
346 Ga0265330_10002110
347 Ga0265330_10013614
348 Ga0265332_10000970
349 Ga0265320_10001169
350 Ga0265329_10000527
351 Ga0265316_10000051
352 Ga0265316_10000776
353 Ga0265316_10004594
354 Ga0265316_10011551
355 Ga0307513_10007311
356 Ga0307509_10000105
357 Ga0265314_10005850
358 Ga0265342_10002045
359 Ga0265342_10003074
360 Ga0307411_10009798
361 Ga0373929_0000005
362 Ga0373952_0001530
363 Ga0373953_0001855
364 Ga0373961_0001073
365 Ga0373924_0001819
366 Ga0373935_0009759
367 Ga0373935_0028302
368 Ga0373947_0000031
369 Ga0373937_0019160
370 Ga0373937_0028270
371 Ga0373925_0002974
372 Ga0373925_0023166
373 Ga0395899_0001415
374 Ga0436361_0458802
375 Ga0436361_0504982
376 Ga0436361_0560696
377 Ga0436361_0863669
378 Ga0451577_0000013
379 Ga0451577_0001782
380 Ga0451577_0044327
381 Ga0453683_0000059
382 Ga0466964_0000845
383 Ga0453684_0000585
384 Ga0453684_0000989
385 Ga0453684_0003502
386 Ga0453684_0031465
387 Ga0466957_0026296
388 Ga0466959_0041010
389 Ga0451576_0000018
390 Ga0451576_0003177
391 Ga0451576_0026161
392 Ga0451576_0057083
393 Ga0495627_000055
394 Ga0495592_0011603
395 Ga0495629_0002932
396 Ga0495638_0000091
397 Ga0495651_0004544
398 Ga0495651_0011181
399 Ga0495653_0003312
400 Ga0495653_0014937
401 Ga0495653_0043122
402 Ga0495650_0000576
403 Ga0495582_0001383
404 Ga0495662_0002389
405 Ga0495583_0000197
406 Ga0495606_0008922
407 Ga0495608_0002075
408 Ga0495608_0006925
409 Ga0495616_0006613
410 Ga0495630_0029809
411 Ga0495643_0000287
412 Ga0495643_0001068
413 Ga0495643_0006208
414 Ga0495648_0000058
415 Ga0495642_0002279
416 Ga0495652_0033107
417 Ga0495587_0010943
418 Ga0495597_0000700
419 Ga0495645_0050721
420 Ga0495633_0000362
421 Ga0495667_0000184
422 Ga0495667_0004900
423 Ga0495668_0000150
424 Ga0495634_0008426
425 Ga0495625_0000132
426 Ga0495635_0016175
427 Ga0495657_0004818
428 Ga0495657_0005833
429 Ga0495657_0014710
430 Ga0495646_0007922
431 Ga0495658_0003499
432 Ga0495581_0001474
433 Ga0495604_0006255
434 Ga0495680_0003776
435 Ga0495680_0008637
436 Ga0495680_0016111
437 Ga0495687_002443
438 Ga0495687_011344
439 Ga0495675_0003296
440 Ga0495593_0002084
441 Ga0495602_0027267
442 Ga0495602_0050730
443 Ga0495626_0000122
444 Ga0496109_0000100
445 Ga0496109_0000879
446 Ga0496110_0000615
447 Ga0496124_0006318
448 Ga0495678_000980
449 Ga0495678_009571
450 Ga0501031_0001344
451 Ga0501032_0003669
452 Ga0501033_0000507
453 Ga0501033_0007319
454 Ga0501034_0008897
455 Ga0501034_0029749
456 Ga0501036_0000319
457 Ga0501037_0001674
458 Ga0501037_0007703
459 Ga0501037_0019415
460 Ga0501038_0001134
461 Ga0501038_0031116
462 Ga0501042_0014890
463 Ga0501043_0000090
464 Ga0501043_0002846
465 Ga0501043_0003803
466 Ga0501046_0000126
467 Ga0501046_0004743
468 Ga0501047_0000160
469 Ga0501047_0003924
470 Ga0501047_0006791
471 Ga0501047_0007578
472 Ga0501047_0028271
473 Ga0501047_0043177
474 Ga0501048_0000040
475 Ga0501073_0058219
476 Ga0501074_0005629
477 Ga0501077_0000256
478 Ga0501202_001206
479 Ga0501227_003786
480 Ga0501080_0006528
481 Ga0501083_0003603
482 Ga0501280_001419
483 Ga0501035_0013183
484 Ga0501044_0000160
485 Ga0501044_0000322
486 Ga0501044_0004052
487 Ga0501044_0014736
488 nmdc:mga06r32_5092_c2
489 nmdc:mga06r32_7773_c1
490 nmdc:mga08x19_11231_c1
491 nmdc:mga0a205_17763_c1
492 Ga0495612_0002189
493 Ga0501082_0000043
494 2521558128
495 2553003254
496 2643822610
497 2643823185
498 2643834167
499 2644055092
500 2739613705
501 2819614728
502 2852656809
503 2852682009
504 2855736582
505 2855773519
506 2856745686
507 2857739605
508 2861522139
509 2881418489
510 2881928783
511 2891569484
512 2904441097
513 2904531960
514 2904587814
515 2904590026
516 2904602586
517 2919046592
518 2919079908
519 2919142351
520 2919478755
521 2923511376
522 2928131308
523 2984569097
524 8007378358
525 8053952914
526 8055226832

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF18921

Cyanophycin_syn

Cyanophycin synthase-like N-terminal domain

22

120

0.95

PF02875

Mur_ligase_C

Mur ligase, glutamate ligase domain

728

854

0.86

PF08443

RimK

RimK-like ATP-grasp domain

217

328

0.83

PF08245

Mur_ligase_M

Mur ligase middle domain

501

703

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
7waf-assembly1.cif.gz_B trichodesmium erythraeum cyanophycin synthetase 1 (tecpha1) with atpgammas and 4x(beta-asp-arg) 0.9554 1 852
7waf-assembly1.cif.gz_C trichodesmium erythraeum cyanophycin synthetase 1 (tecpha1) with atpgammas and 4x(beta-asp-arg) 0.9505 1 704
7waf-assembly1.cif.gz_B trichodesmium erythraeum cyanophycin synthetase 1 (tecpha1) with atpgammas and 4x(beta-asp-arg) 0.95 1 852
7waf-assembly1.cif.gz_C trichodesmium erythraeum cyanophycin synthetase 1 (tecpha1) with atpgammas and 4x(beta-asp-arg) 0.9238 1 704
7lgj-assembly1.cif.gz_A cyanophycin synthetase 1 from synechocystis sp. utex2470 with adpcp and 8x(asp-arg)-nh2 0.9198 1 852
ID Description Score Start End Superfamily
af_A4I7A2_198_259_3.30.1490.20 Alpha Beta;2-Layer Sandwich;Dna Ligase; domain 1;ATP-grasp fold, A domain 0.892 227 285 3.30.1490.20
af_Q58881_123_195_3.30.1490.20 Alpha Beta;2-Layer Sandwich;Dna Ligase; domain 1;ATP-grasp fold, A domain 0.8884 216 282 3.30.1490.20
4bubB03 Alpha Beta;Alpha-Beta Complex;Protein-Tyrosine Phosphatase; Chain A;Mur ligase, C-terminal domain 0.8831 721 838 3.90.190.20
1bxrG07 Alpha Beta;2-Layer Sandwich;Dna Ligase; domain 1;ATP-grasp fold, A domain 0.8768 220 285 3.30.1490.20
1c3oA03 Alpha Beta;2-Layer Sandwich;Dna Ligase; domain 1;ATP-grasp fold, A domain 0.871 220 285 3.30.1490.20
ID Description Score Start End GO Terms
AF-D9PKB3-F1-model_v4 Cyanophycin synthetase 0.9815 712 809 GO:0009058
GO:0016881
AF-A0A011QCB1-F1-model_v4 Cyanophycin synthetase (EC 6.3.2.29) 0.9768 680 856 GO:0009058
GO:0071160
AF-A0A536UQT2-F1-model_v4 Cyanophycin synthetase 0.9754 708 855 GO:0009058
GO:0016881
AF-A0A4Q3JEI8-F1-model_v4 deleted 0.9711 1 130
AF-Q5QCP3-F1-model_v4 Cyanophycin synthase (L-aspartate-adding) 0.9687 441 853 GO:0004326
GO:0005524

Map