F372106

General Info

Members Datasets Scaffolds Average Seq Length
263 179 257 194

Family's Representative Sequence

Representative Sequence 3300046533|Ga0495640_0047264|Ga0495640_0047264_1017_1679
Length 220
Sequence MSRSPTLLSTVGQQQSKVGDMSEPSYRRLDVDERRRQLLGRGAELFTSHPYDELSMNKIAAEAGISKALLYHYFPSKRAFFEETLGAWAEQLRERTEPDPDLPPIEQLKGSLDAFLSLVEENAAAYRNLMDSATGVPEIRDLIDRVRRATARRILDALYPDGAPPKARTAVSGWLWFMDGACLNWIEHGDIERGELRDLLLGVLMGALVAAGALPEVPGT

Samples

Sample ID Description Type Environment
1 2565956761 Rhodococcus qingshengii BKS 20-40 Isolate Rhizosphere
2 2738543011 Rhodococcus sp. OK611 Isolate Unclassified
3 2889300758 Rhodococcus sp. PvR099 Isolate Rhizosphere
4 2904535858 Rhodococcus erythropolis 2017 Isolate Unclassified
5 2922554459 Rhodococcus sp. 66b Isolate Unclassified
6 2939743619 Rhodococcus sp. PvR044 Isolate Rhizosphere
7 3300000546 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN_Illumina_Assembled Metagenome Rhizosphere
8 3300001977 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5 Metagenome Rhizosphere
9 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
10 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
11 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
12 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
13 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
14 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
15 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
16 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
17 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
18 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
19 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
20 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
21 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
22 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
23 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
24 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
25 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
26 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
27 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
28 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
29 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
30 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
31 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
32 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
33 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
34 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
35 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
36 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
37 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
38 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
39 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
40 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
41 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
42 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
43 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
44 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
45 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
46 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
47 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
48 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
49 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
50 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
51 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
52 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
53 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
54 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
55 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
56 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
57 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
58 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
59 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
60 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
61 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
62 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
63 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
64 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
65 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
66 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
67 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
68 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
102 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
103 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
104 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
105 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
106 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
107 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
108 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
109 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
110 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
111 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
112 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
113 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
114 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
115 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
116 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
117 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
118 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
119 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
120 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
121 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
122 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
123 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
124 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
125 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
126 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
127 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
128 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
129 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
130 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
131 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
132 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
133 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
134 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
135 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
136 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
137 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
138 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
139 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
140 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
141 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
142 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
143 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
144 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
145 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
146 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
147 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
148 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
149 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
150 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
151 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
152 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
153 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
154 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
155 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
156 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
157 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
158 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
159 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
160 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
161 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
162 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
163 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
164 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
165 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
166 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
167 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
168 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
169 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
170 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
171 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
172 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
173 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
174 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
175 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
176 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
177 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
178 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
179 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.72
Metatranscriptomes 0
Isolates 2.28

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.66
Nodule 0
Rhizoplane 14.45
Rhizosphere 78.33
Stem 0
Stem Tuber 0
Unclassified 4.56

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 LJNas_1007924 3300000546 Bacteria 1144
2 JGI24746J21847_1000243 3300001977 Bacteria 7581
3 JGI24740J21852_10005729 3300001979 Bacteria 5225
4 Ga0070658_10027272 3300005327 Bacteria 4585
5 Ga0070683_100022820 3300005329 Bacteria 5597
6 Ga0070683_100330651 3300005329 Bacteria 1451
7 Ga0070666_10149584 3300005335 Bacteria 1628
8 Ga0070682_100000009 3300005337 Bacteria 291635
9 Ga0070682_100048744 3300005337 Bacteria 2638
10 Ga0070682_100367980 3300005337 Bacteria 1077
11 Ga0068868_100000325 3300005338 Bacteria 32103
12 Ga0068868_100002253 3300005338 Bacteria 13345
13 Ga0070689_100178203 3300005340 Bacteria 1725
14 Ga0070691_10082163 3300005341 Bacteria 1579
15 Ga0070661_100000255 3300005344 Bacteria 43552
16 Ga0070692_10029152 3300005345 Bacteria 2750
17 Ga0070669_100025851 3300005353 Bacteria 4220
18 Ga0070675_100000196 3300005354 Bacteria 38134
19 Ga0070674_100000034 3300005356 Bacteria 63783
20 Ga0070673_100001033 3300005364 Bacteria 15784
21 Ga0070673_100486821 3300005364 Bacteria 1114
22 Ga0070688_100000537 3300005365 Bacteria 19177
23 Ga0070688_100018989 3300005365 Bacteria 3977
24 Ga0070659_100000954 3300005366 Bacteria 21269
25 Ga0070667_100004278 3300005367 Bacteria 12055
26 Ga0070667_100007633 3300005367 Bacteria 8971
27 Ga0070709_10528982 3300005434 Bacteria 899
28 Ga0070711_100049557 3300005439 Unclassified 2876
29 Ga0070700_100101277 3300005441 Bacteria 1898
30 Ga0070700_100186580 3300005441 Bacteria 1447
31 Ga0070663_100528539 3300005455 Bacteria 983
32 Ga0070685_10002047 3300005466 Bacteria 10442
33 Ga0070685_10007676 3300005466 Bacteria 5521
34 Ga0070684_100021027 3300005535 Bacteria 5421
35 Ga0070684_100088533 3300005535 Bacteria 2751
36 Ga0070684_100273398 3300005535 Bacteria 1547
37 Ga0070665_100000022 3300005548 Bacteria 379286
38 Ga0070665_100006129 3300005548 Bacteria 12291
39 Ga0070665_100090096 3300005548 Bacteria 3073
40 Ga0070665_100173171 3300005548 Bacteria 2159
41 Ga0068855_100587777 3300005563 Bacteria 1202
42 Ga0070664_100223063 3300005564 Bacteria 1687
43 Ga0068857_100524468 3300005577 Bacteria 1114
44 Ga0068854_100537007 3300005578 Bacteria 990
45 Ga0070702_100028815 3300005615 Bacteria 3013
46 Ga0068852_100000132 3300005616 Bacteria 50593
47 Ga0068852_100007305 3300005616 Bacteria 8056
48 Ga0068866_10000005 3300005718 Bacteria 196339
49 Ga0068866_10162847 3300005718 Bacteria 1302
50 Ga0068851_10014564 3300005834 Bacteria 3736
51 Ga0068870_10428227 3300005840 Bacteria 867
52 Ga0068858_100000264 3300005842 Bacteria 55994
53 Ga0068860_100539568 3300005843 Bacteria 1168
54 Ga0081455_10001231 3300005937 Bacteria 31996
55 Ga0081539_10001515 3300005985 Bacteria 39009
56 Ga0075367_10067519 3300006178 Bacteria 2144
57 Ga0075430_100088505 3300006846 Bacteria 2591
58 Ga0068865_100000039 3300006881 Bacteria 73689
59 Ga0105245_10000022 3300009098 Bacteria 181225
60 Ga0105245_10001911 3300009098 Bacteria 18926
61 Ga0105245_10661818 3300009098 Bacteria 1075
62 Ga0105247_10046299 3300009101 Bacteria 2670
63 Ga0105243_10003135 3300009148 Bacteria 13576
64 Ga0105243_10008836 3300009148 Bacteria 7715
65 Ga0105241_10514610 3300009174 Bacteria 1069
66 Ga0105242_10003474 3300009176 Bacteria 12252
67 Ga0105242_10032256 3300009176 Bacteria 4188
68 Ga0105242_10045572 3300009176 Bacteria 3554
69 Ga0105248_10000017 3300009177 Bacteria 298089
70 Ga0105237_10217273 3300009545 Bacteria 1912
71 Ga0105238_10280475 3300009551 Bacteria 1648
72 Ga0105239_10067082 3300010375 Bacteria 3941
73 Ga0105239_10456956 3300010375 Unclassified 1449
74 Ga0157371_10005762 3300013102 Bacteria 10381
75 Ga0157369_10000803 3300013105 Bacteria 40158
76 Ga0157374_11057078 3300013296 Unclassified 832
77 Ga0157378_10001452 3300013297 Bacteria 21356
78 Ga0157378_10022191 3300013297 Bacteria 5587
79 Ga0163162_10367604 3300013306 Bacteria 1571
80 Ga0157375_10001744 3300013308 Bacteria 18673
81 Ga0157375_10591540 3300013308 Bacteria 1269
82 Ga0163163_10052225 3300014325 Bacteria 4032
83 Ga0163163_11171466 3300014325 Bacteria 831
84 Ga0157380_10000100 3300014326 Bacteria 48182
85 Ga0157380_10167761 3300014326 Bacteria 1915
86 Ga0157376_10047303 3300014969 Bacteria 3551
87 Ga0163161_10000022 3300017792 Bacteria 207890
88 Ga0163161_10042381 3300017792 Unclassified 3274
89 Ga0207656_10001282 3300025321 Bacteria 8256
90 Ga0207642_10000005 3300025899 Bacteria 401934
91 Ga0207642_10092128 3300025899 Bacteria 1500
92 Ga0207680_10007266 3300025903 Bacteria 5389
93 Ga0207699_10670793 3300025906 Bacteria 758
94 Ga0207643_10400755 3300025908 Bacteria 867
95 Ga0207705_10021886 3300025909 Bacteria 4561
96 Ga0207671_10351374 3300025914 Unclassified 1169
97 Ga0207663_10038545 3300025916 Bacteria 2890
98 Ga0207649_10000015 3300025920 Bacteria 245662
99 Ga0207681_10016195 3300025923 Bacteria 4659
100 Ga0207694_10092478 3300025924 Bacteria 2388
101 Ga0207659_10000268 3300025926 Bacteria 31760
102 Ga0207687_10000025 3300025927 Bacteria 175177
103 Ga0207687_10000065 3300025927 Bacteria 80752
104 Ga0207690_10008467 3300025932 Bacteria 6105
105 Ga0207690_10030465 3300025932 Unclassified 3442
106 Ga0207686_10000035 3300025934 Bacteria 130483
107 Ga0207686_10004141 3300025934 Bacteria 7780
108 Ga0207686_10012129 3300025934 Bacteria 4735
109 Ga0207686_10506129 3300025934 Unclassified 938
110 Ga0207709_10007673 3300025935 Bacteria 5984
111 Ga0207709_10007787 3300025935 Bacteria 5938
112 Ga0207669_10000060 3300025937 Bacteria 54757
113 Ga0207704_10000165 3300025938 Bacteria 35234
114 Ga0207711_10000011 3300025941 Bacteria 518817
115 Ga0207661_10000545 3300025944 Bacteria 24110
116 Ga0207661_10131053 3300025944 Bacteria 2148
117 Ga0207679_10178459 3300025945 Bacteria 1755
118 Ga0207651_10001173 3300025960 Bacteria 11751
119 Ga0207668_10006357 3300025972 Bacteria 6986
120 Ga0207658_10001527 3300025986 Bacteria 17978
121 Ga0207658_10007517 3300025986 Bacteria 7423
122 Ga0207677_10000813 3300026023 Bacteria 17842
123 Ga0207677_10009506 3300026023 Bacteria 5473
124 Ga0207703_10001272 3300026035 Bacteria 23450
125 Ga0207639_10930861 3300026041 Unclassified 813
126 Ga0207678_10366720 3300026067 Unclassified 1244
127 Ga0207678_10375992 3300026067 Bacteria 1228
128 Ga0207708_10126303 3300026075 Bacteria 1996
129 Ga0207641_10000016 3300026088 Bacteria 307363
130 Ga0207698_10000014 3300026142 Bacteria 240703
131 Ga0207698_10003292 3300026142 Bacteria 9709
132 Ga0268266_10000029 3300028379 Bacteria 424015
133 Ga0268266_10001865 3300028379 Bacteria 23816
134 Ga0268266_10013919 3300028379 Bacteria 6926
135 Ga0268266_10081482 3300028379 Bacteria 2822
136 Ga0268266_10315937 3300028379 Bacteria 1461
137 Ga0268265_10043702 3300028380 Bacteria 3332
138 Ga0307413_10445062 3300031824 Bacteria 1027
139 Ga0307406_10391707 3300031901 Bacteria 1099
140 Ga0395900_0142977 3300037418 Bacteria 2449
141 Ga0395898_0076217 3300037466 Bacteria 3239
142 Ga0395901_0219979 3300038443 Bacteria 1985
143 Ga0451791_0270008 3300041451 Bacteria 826
144 Ga0451807_1999704 3300041486 Bacteria 1360
145 Ga0451807_2224027 3300041486 Bacteria 1495
146 Ga0451853_1748776 3300041512 Bacteria 5477
147 Ga0466963_0025857 3300044694 Bacteria 3748
148 Ga0466957_0059839 3300044842 Bacteria 2335
149 Ga0495592_0114741 3300046454 Bacteria 1902
150 Ga0495629_0003016 3300046459 Bacteria 12813
151 Ga0495629_0003154 3300046459 Bacteria 12483
152 Ga0495638_0006130 3300046460 Bacteria 8800
153 Ga0495641_0000010 3300046461 Bacteria 158798
154 Ga0495641_0071610 3300046461 Unclassified 1556
155 Ga0495653_0041457 3300046463 Bacteria 3593
156 Ga0495580_0349546 3300046472 Bacteria 1002
157 Ga0495582_0000002 3300046473 Bacteria 219909
158 Ga0495606_0000886 3300046507 Bacteria 44754
159 Ga0495608_0000071 3300046511 Bacteria 77182
160 Ga0495608_0000284 3300046511 Bacteria 35636
161 Ga0495610_0081263 3300046512 Unclassified 1488
162 Ga0495628_0016515 3300046516 Bacteria 6156
163 Ga0495628_0390100 3300046516 Bacteria 1019
164 Ga0495630_0000027 3300046517 Bacteria 146589
165 Ga0495630_0015546 3300046517 Bacteria 5559
166 Ga0495640_0047264 3300046533 Bacteria 2979
167 Ga0495656_0062478 3300046615 Bacteria 1629
168 Ga0495668_0000352 3300046616 Bacteria 61322
169 Ga0495625_0000552 3300046660 Bacteria 54805
170 Ga0495635_0000031 3300046663 Bacteria 110244
171 Ga0495588_0000204 3300046674 Bacteria 58892
172 Ga0495588_0289578 3300046674 Bacteria 863
173 Ga0495657_0000096 3300046675 Bacteria 77239
174 Ga0495599_0157634 3300046678 Bacteria 1404
175 Ga0495658_0000001 3300046683 Bacteria 385362
176 Ga0495658_0018840 3300046683 Bacteria 3595
177 Ga0495613_0000155 3300046689 Bacteria 67203
178 Ga0495624_0000019 3300046690 Bacteria 102237
179 Ga0495624_0000200 3300046690 Bacteria 45997
180 Ga0495624_0032343 3300046690 Bacteria 3393
181 Ga0495649_0004516 3300046694 Bacteria 9087
182 Ga0495600_0067021 3300046809 Bacteria 2346
183 Ga0495581_0037495 3300047315 Bacteria 2806
184 Ga0495581_0334171 3300047315 Bacteria 884
185 Ga0495604_0000201 3300047317 Bacteria 54479
186 Ga0495604_0159634 3300047317 Bacteria 1594
187 Ga0495674_0000024 3300047319 Bacteria 141746
188 Ga0495676_0005489 3300047321 Bacteria 11631
189 Ga0495676_0042721 3300047321 Unclassified 3718
190 Ga0495675_0000036 3300047444 Bacteria 91842
191 Ga0495602_0000548 3300048088 Bacteria 35114
192 Ga0496100_0000006 3300048903 Bacteria 297429
193 Ga0496101_0000009 3300048904 Bacteria 297429
194 Ga0496102_0000021 3300048905 Bacteria 246920
195 Ga0496102_0039645 3300048905 Bacteria 4257
196 Ga0496102_0755432 3300048905 Bacteria 895
197 Ga0496103_0000001 3300048906 Bacteria 643471
198 Ga0496103_0014413 3300048906 Bacteria 4693
199 Ga0496104_0000008 3300048907 Bacteria 516976
200 Ga0496104_0000029 3300048907 Bacteria 202968
201 Ga0496104_0191172 3300048907 Bacteria 1958
202 Ga0496105_0000002 3300048908 Bacteria 753215
203 Ga0496105_0000003 3300048908 Bacteria 713251
204 Ga0496105_0255998 3300048908 Bacteria 1417
205 Ga0496106_0000030 3300048909 Bacteria 136804
206 Ga0496106_0000072 3300048909 Bacteria 80978
207 Ga0496106_0429287 3300048909 Unclassified 1062
208 Ga0496107_0000015 3300048910 Bacteria 173644
209 Ga0496107_0256544 3300048910 Bacteria 1301
210 Ga0496107_0508338 3300048910 Bacteria 893
211 Ga0496107_0553253 3300048910 Unclassified 852
212 Ga0496108_0000004 3300048911 Bacteria 545055
213 Ga0496108_0000239 3300048911 Bacteria 49308
214 Ga0496108_0056603 3300048911 Bacteria 3295
215 Ga0496109_0000011 3300048912 Bacteria 234908
216 Ga0496109_0000031 3300048912 Bacteria 163998
217 Ga0496109_0000304 3300048912 Bacteria 46522
218 Ga0496109_0025267 3300048912 Bacteria 5291
219 Ga0496110_0002030 3300048913 Bacteria 15083
220 Ga0496110_0035856 3300048913 Bacteria 4306
221 Ga0496110_0366023 3300048913 Bacteria 1314
222 Ga0496110_0409001 3300048913 Bacteria 1237
223 Ga0496111_0005503 3300048914 Bacteria 8131
224 Ga0496114_0004543 3300048917 Bacteria 10775
225 Ga0496114_0524711 3300048917 Bacteria 1047
226 Ga0496115_0480406 3300048918 Bacteria 1001
227 Ga0496117_0001530 3300048920 Bacteria 33004
228 Ga0496117_0172647 3300048920 Bacteria 1253
229 Ga0496118_0000289 3300048921 Bacteria 87537
230 Ga0496118_0201617 3300048921 Bacteria 1178
231 Ga0496120_0066521 3300048923 Bacteria 1993
232 Ga0496125_0017723 3300048928 Bacteria 6779
233 Ga0496125_0044369 3300048928 Bacteria 3761
234 Ga0496126_0060086 3300048929 Bacteria 3420
235 Ga0501031_0230139 3300049568 Bacteria 1206
236 Ga0501032_0439122 3300049569 Bacteria 837
237 Ga0501037_0071969 3300049573 Bacteria 2515
238 Ga0501039_0020439 3300049575 Bacteria 5074
239 Ga0501042_0015093 3300049578 Bacteria 5283
240 Ga0501071_0091140 3300049587 Bacteria 2239
241 Ga0501075_0012881 3300049591 Bacteria 5954
242 nmdc:mga03n38_56763_c2 3300050490 Bacteria 995
243 nmdc:mga06z11_52943_c1 3300050494 Bacteria 2085
244 nmdc:mga07m45_15723_c1 3300050496 Bacteria 4042
245 nmdc:mga0qj67_175167_c1 3300050509 Bacteria 1742
246 Ga0495601_0000019 3300053077 Bacteria 161673
247 Ga0495601_0000231 3300053077 Bacteria 30020
248 Ga0495655_0016074 3300053083 Bacteria 1604
249 Ga0495595_0000009 3300053084 Bacteria 193039
250 Ga0495595_0000045 3300053084 Bacteria 63054
251 Ga0495595_0011635 3300053084 Bacteria 3682
252 Ga0495619_0000124 3300053085 Bacteria 56387
253 Ga0495619_0003310 3300053085 Bacteria 10415
254 Ga0500566_0079052 3300053094 Bacteria 1834
255 Ga0500641_0000818 3300053096 Bacteria 11242
256 Ga0500614_000060 3300053123 Bacteria 23367
257 Ga0501082_0533082 3300060353 Bacteria 1027

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049587 Ga0501071_0091140 Ga0501071_0091140_1736_2218 148
2 3300046516 Ga0495628_0390100 Ga0495628_0390100_178_669 152
3 iso_pu_bacteria 2565956761 2566991342 161
4 3300046616 Ga0495668_0000352 Ga0495668_0000352_11013_11597 165
5 3300048920 Ga0496117_0172647 Ga0496117_0172647_59_643 165
6 3300048928 Ga0496125_0017723 Ga0496125_0017723_3378_3962 165
7 3300050490 nmdc:mga03n38_56763_c2 nmdc:mga03n38_56763_c2_313_897 165
8 3300050494 nmdc:mga06z11_52943_c1 nmdc:mga06z11_52943_c1_1146_1730 165
9 3300050496 nmdc:mga07m45_15723_c1 nmdc:mga07m45_15723_c1_1279_1863 165
10 3300005843 Ga0068860_100539568 Ga0068860_1005395682 173
11 3300048903 Ga0496100_0000006 Ga0496100_0000006_147546_148118 175
12 3300048904 Ga0496101_0000009 Ga0496101_0000009_147546_148118 175
13 3300048909 Ga0496106_0000072 Ga0496106_0000072_53412_53984 175
14 3300048910 Ga0496107_0000015 Ga0496107_0000015_43774_44346 175
15 3300005337 Ga0070682_100000009 Ga0070682_100000009120 177
16 3300005366 Ga0070659_100000954 Ga0070659_1000009543 178
17 3300046809 Ga0495600_0067021 Ga0495600_0067021_140_739 178
18 3300047317 Ga0495604_0000201 Ga0495604_0000201_50079_50678 178
19 3300048088 Ga0495602_0000548 Ga0495602_0000548_678_1277 178
20 3300053083 Ga0495655_0016074 Ga0495655_0016074_171_764 178
21 3300053084 Ga0495595_0011635 Ga0495595_0011635_2848_3447 178
22 3300005441 Ga0070700_100101277 Ga0070700_1001012771 180
23 3300025932 Ga0207690_10008467 Ga0207690_100084673 180
24 3300025932 Ga0207690_10030465 Ga0207690_100304652 180
25 3300026075 Ga0207708_10126303 Ga0207708_101263032 180
26 3300046663 Ga0495635_0000031 Ga0495635_0000031_71489_72124 180
27 3300046690 Ga0495624_0000019 Ga0495624_0000019_15460_16062 180
28 3300046690 Ga0495624_0032343 Ga0495624_0032343_1734_2351 180
29 3300047315 Ga0495581_0334171 Ga0495581_0334171_119_724 180
30 3300048909 Ga0496106_0000030 Ga0496106_0000030_20201_20827 180
31 3300048910 Ga0496107_0256544 Ga0496107_0256544_419_1045 180
32 3300048913 Ga0496110_0035856 Ga0496110_0035856_867_1448 180
33 3300001977 JGI24746J21847_1000243 JGI24746J21847_10002432 181
34 3300005353 Ga0070669_100025851 Ga0070669_1000258512 181
35 3300005364 Ga0070673_100001033 Ga0070673_1000010336 181
36 3300010375 Ga0105239_10067082 Ga0105239_100670822 181
37 3300013105 Ga0157369_10000803 Ga0157369_1000080325 181
38 3300013297 Ga0157378_10001452 Ga0157378_100014523 181
39 3300017792 Ga0163161_10000022 Ga0163161_1000002228 181
40 3300025923 Ga0207681_10016195 Ga0207681_100161952 181
41 3300025934 Ga0207686_10506129 Ga0207686_105061291 181
42 3300025960 Ga0207651_10001173 Ga0207651_100011736 181
43 3300026088 Ga0207641_10000016 Ga0207641_10000016125 181
44 3300041486 Ga0451807_2224027 Ga0451807_2224027_433_1038 181
45 3300044842 Ga0466957_0059839 Ga0466957_0059839_1470_2051 181
46 3300046461 Ga0495641_0071610 Ga0495641_0071610_722_1348 181
47 3300046463 Ga0495653_0041457 Ga0495653_0041457_2256_2882 181
48 3300046473 Ga0495582_0000002 Ga0495582_0000002_66759_67364 181
49 3300046507 Ga0495606_0000886 Ga0495606_0000886_20387_20968 181
50 3300046511 Ga0495608_0000284 Ga0495608_0000284_30872_31498 181
51 3300046516 Ga0495628_0016515 Ga0495628_0016515_4941_5567 181
52 3300046517 Ga0495630_0015546 Ga0495630_0015546_2506_3132 181
53 3300046683 Ga0495658_0000001 Ga0495658_0000001_324904_325509 181
54 3300048911 Ga0496108_0056603 Ga0496108_0056603_1065_1646 181
55 3300048912 Ga0496109_0000011 Ga0496109_0000011_155599_156180 181
56 3300053084 Ga0495595_0000045 Ga0495595_0000045_54158_54784 181
57 3300005344 Ga0070661_100000255 Ga0070661_10000025525 182
58 3300005455 Ga0070663_100528539 Ga0070663_1005285391 182
59 3300005563 Ga0068855_100587777 Ga0068855_1005877772 182
60 3300009174 Ga0105241_10514610 Ga0105241_105146101 182
61 3300009545 Ga0105237_10217273 Ga0105237_102172732 182
62 3300009551 Ga0105238_10280475 Ga0105238_102804752 182
63 3300025914 Ga0207671_10351374 Ga0207671_103513742 182
64 3300025920 Ga0207649_10000015 Ga0207649_10000015102 182
65 3300025924 Ga0207694_10092478 Ga0207694_100924782 182
66 3300026067 Ga0207678_10375992 Ga0207678_103759921 182
67 3300031824 Ga0307413_10445062 Ga0307413_104450622 182
68 3300031901 Ga0307406_10391707 Ga0307406_103917072 182
69 3300049573 Ga0501037_0071969 Ga0501037_0071969_832_1413 182
70 iso_pu_bacteria 2738543011 2739239886 182
71 iso_pu_bacteria 2889300758 2889302660 182
72 iso_pu_bacteria 2904535858 2904541697 182
73 iso_pu_bacteria 2922554459 2922556223 182
74 iso_pu_bacteria 2939743619 2939747881 182
75 3300005345 Ga0070692_10029152 Ga0070692_100291522 183
76 3300046694 Ga0495649_0004516 Ga0495649_0004516_5416_6012 183
77 3300049569 Ga0501032_0439122 Ga0501032_0439122_149_736 183
78 3300009098 Ga0105245_10001911 Ga0105245_100019113 184
79 3300005329 Ga0070683_100330651 Ga0070683_1003306512 185
80 3300005335 Ga0070666_10149584 Ga0070666_101495842 185
81 3300005340 Ga0070689_100178203 Ga0070689_1001782031 185
82 3300005367 Ga0070667_100004278 Ga0070667_1000042786 185
83 3300005367 Ga0070667_100007633 Ga0070667_1000076335 185
84 3300005548 Ga0070665_100090096 Ga0070665_1000900961 185
85 3300005616 Ga0068852_100000132 Ga0068852_10000013231 185
86 3300005985 Ga0081539_10001515 Ga0081539_100015159 185
87 3300006178 Ga0075367_10067519 Ga0075367_100675192 185
88 3300009148 Ga0105243_10003135 Ga0105243_1000313511 185
89 3300009177 Ga0105248_10000017 Ga0105248_10000017137 185
90 3300014325 Ga0163163_11171466 Ga0163163_111714661 185
91 3300025903 Ga0207680_10007266 Ga0207680_100072665 185
92 3300025927 Ga0207687_10000025 Ga0207687_10000025171 185
93 3300025935 Ga0207709_10007673 Ga0207709_100076734 185
94 3300025941 Ga0207711_10000011 Ga0207711_10000011184 185
95 3300025944 Ga0207661_10131053 Ga0207661_101310532 185
96 3300025972 Ga0207668_10006357 Ga0207668_100063574 185
97 3300025986 Ga0207658_10001527 Ga0207658_100015275 185
98 3300025986 Ga0207658_10007517 Ga0207658_100075173 185
99 3300026023 Ga0207677_10000813 Ga0207677_1000081318 185
100 3300026067 Ga0207678_10366720 Ga0207678_103667202 185
101 3300026142 Ga0207698_10000014 Ga0207698_10000014204 185
102 3300028379 Ga0268266_10001865 Ga0268266_100018654 185
103 3300028379 Ga0268266_10315937 Ga0268266_103159372 185
104 3300028380 Ga0268265_10043702 Ga0268265_100437023 185
105 3300046459 Ga0495629_0003154 Ga0495629_0003154_8728_9333 185
106 3300046472 Ga0495580_0349546 Ga0495580_0349546_11_619 185
107 3300046615 Ga0495656_0062478 Ga0495656_0062478_57_665 185
108 3300046674 Ga0495588_0289578 Ga0495588_0289578_197_805 185
109 3300047315 Ga0495581_0037495 Ga0495581_0037495_1069_1677 185
110 3300047321 Ga0495676_0005489 Ga0495676_0005489_6039_6644 185
111 3300048907 Ga0496104_0000008 Ga0496104_0000008_336950_337546 185
112 3300048908 Ga0496105_0000003 Ga0496105_0000003_336950_337546 185
113 3300048913 Ga0496110_0366023 Ga0496110_0366023_113_733 185
114 3300048917 Ga0496114_0004543 Ga0496114_0004543_3475_4071 185
115 3300048921 Ga0496118_0201617 Ga0496118_0201617_396_1016 185
116 3300049568 Ga0501031_0230139 Ga0501031_0230139_587_1183 185
117 3300049575 Ga0501039_0020439 Ga0501039_0020439_170_766 185
118 3300049591 Ga0501075_0012881 Ga0501075_0012881_1285_1881 185
119 3300060353 Ga0501082_0533082 Ga0501082_0533082_277_873 185
120 3300005337 Ga0070682_100367980 Ga0070682_1003679801 186
121 3300005338 Ga0068868_100000325 Ga0068868_10000032517 186
122 3300005356 Ga0070674_100000034 Ga0070674_10000003410 186
123 3300005365 Ga0070688_100018989 Ga0070688_1000189893 186
124 3300005439 Ga0070711_100049557 Ga0070711_1000495572 186
125 3300005466 Ga0070685_10007676 Ga0070685_100076763 186
126 3300005548 Ga0070665_100000022 Ga0070665_100000022217 186
127 3300005577 Ga0068857_100524468 Ga0068857_1005244681 186
128 3300005578 Ga0068854_100537007 Ga0068854_1005370071 186
129 3300005718 Ga0068866_10000005 Ga0068866_10000005186 186
130 3300005842 Ga0068858_100000264 Ga0068858_1000002643 186
131 3300009176 Ga0105242_10032256 Ga0105242_100322562 186
132 3300013102 Ga0157371_10005762 Ga0157371_1000576210 186
133 3300025899 Ga0207642_10000005 Ga0207642_10000005391 186
134 3300025916 Ga0207663_10038545 Ga0207663_100385453 186
135 3300025934 Ga0207686_10012129 Ga0207686_100121293 186
136 3300025937 Ga0207669_10000060 Ga0207669_1000006046 186
137 3300026035 Ga0207703_10001272 Ga0207703_1000127220 186
138 3300028379 Ga0268266_10000029 Ga0268266_10000029236 186
139 3300046660 Ga0495625_0000552 Ga0495625_0000552_18389_18991 186
140 3300048905 Ga0496102_0755432 Ga0496102_0755432_35_631 186
141 3300005329 Ga0070683_100022820 Ga0070683_1000228203 187
142 3300005535 Ga0070684_100021027 Ga0070684_1000210273 187
143 3300009098 Ga0105245_10000022 Ga0105245_1000002219 187
144 3300025927 Ga0207687_10000065 Ga0207687_1000006559 187
145 3300025944 Ga0207661_10000545 Ga0207661_100005456 187
146 3300037418 Ga0395900_0142977 Ga0395900_0142977_1012_1626 187
147 3300037466 Ga0395898_0076217 Ga0395898_0076217_1807_2421 187
148 3300038443 Ga0395901_0219979 Ga0395901_0219979_381_995 187
149 3300041451 Ga0451791_0270008 Ga0451791_0270008_68_667 187
150 3300041512 Ga0451853_1748776 Ga0451853_1748776_1194_1790 187
151 3300046461 Ga0495641_0000010 Ga0495641_0000010_137950_138552 187
152 3300046689 Ga0495613_0000155 Ga0495613_0000155_27950_28549 187
153 3300047317 Ga0495604_0159634 Ga0495604_0159634_84_680 187
154 3300048907 Ga0496104_0191172 Ga0496104_0191172_255_854 187
155 3300048909 Ga0496106_0429287 Ga0496106_0429287_289_885 187
156 3300048910 Ga0496107_0553253 Ga0496107_0553253_60_656 187
157 3300048911 Ga0496108_0000004 Ga0496108_0000004_234248_234853 187
158 3300048912 Ga0496109_0000031 Ga0496109_0000031_80461_81066 187
159 3300048928 Ga0496125_0044369 Ga0496125_0044369_3018_3623 187
160 3300053077 Ga0495601_0000019 Ga0495601_0000019_28032_28631 187
161 3300053077 Ga0495601_0000231 Ga0495601_0000231_23627_24262 187
162 3300053094 Ga0500566_0079052 Ga0500566_0079052_316_912 187
163 3300053123 Ga0500614_000060 Ga0500614_000060_7991_8593 187
164 3300005834 Ga0068851_10014564 Ga0068851_100145642 188
165 3300025321 Ga0207656_10001282 Ga0207656_100012824 188
166 3300046511 Ga0495608_0000071 Ga0495608_0000071_7125_7727 188
167 3300046675 Ga0495657_0000096 Ga0495657_0000096_7182_7784 188
168 3300047444 Ga0495675_0000036 Ga0495675_0000036_42568_43170 188
169 3300048913 Ga0496110_0409001 Ga0496110_0409001_120_725 188
170 3300053084 Ga0495595_0000009 Ga0495595_0000009_69456_70058 188
171 3300053085 Ga0495619_0000124 Ga0495619_0000124_48689_49291 188
172 3300053096 Ga0500641_0000818 Ga0500641_0000818_1792_2391 188
173 3300000546 LJNas_1007924 LJNas_10079242 189
174 3300001979 JGI24740J21852_10005729 JGI24740J21852_100057295 189
175 3300005327 Ga0070658_10027272 Ga0070658_100272724 189
176 3300005337 Ga0070682_100048744 Ga0070682_1000487442 189
177 3300005338 Ga0068868_100002253 Ga0068868_10000225310 189
178 3300005341 Ga0070691_10082163 Ga0070691_100821632 189
179 3300005354 Ga0070675_100000196 Ga0070675_10000019618 189
180 3300005364 Ga0070673_100486821 Ga0070673_1004868212 189
181 3300005365 Ga0070688_100000537 Ga0070688_10000053715 189
182 3300005434 Ga0070709_10528982 Ga0070709_105289821 189
183 3300005441 Ga0070700_100186580 Ga0070700_1001865801 189
184 3300005466 Ga0070685_10002047 Ga0070685_100020477 189
185 3300005535 Ga0070684_100088533 Ga0070684_1000885332 189
186 3300005535 Ga0070684_100273398 Ga0070684_1002733982 189
187 3300005548 Ga0070665_100006129 Ga0070665_10000612910 189
188 3300005548 Ga0070665_100173171 Ga0070665_1001731712 189
189 3300005564 Ga0070664_100223063 Ga0070664_1002230633 189
190 3300005615 Ga0070702_100028815 Ga0070702_1000288152 189
191 3300005616 Ga0068852_100007305 Ga0068852_1000073054 189
192 3300005718 Ga0068866_10162847 Ga0068866_101628472 189
193 3300005840 Ga0068870_10428227 Ga0068870_104282271 189
194 3300005937 Ga0081455_10001231 Ga0081455_1000123113 189
195 3300006846 Ga0075430_100088505 Ga0075430_1000885051 189
196 3300006881 Ga0068865_100000039 Ga0068865_10000003947 189
197 3300009098 Ga0105245_10661818 Ga0105245_106618182 189
198 3300009101 Ga0105247_10046299 Ga0105247_100462992 189
199 3300009148 Ga0105243_10008836 Ga0105243_100088363 189
200 3300009176 Ga0105242_10003474 Ga0105242_100034746 189
201 3300009176 Ga0105242_10045572 Ga0105242_100455722 189
202 3300010375 Ga0105239_10456956 Ga0105239_104569562 189
203 3300013296 Ga0157374_11057078 Ga0157374_110570781 189
204 3300013297 Ga0157378_10022191 Ga0157378_100221913 189
205 3300013306 Ga0163162_10367604 Ga0163162_103676042 189
206 3300013308 Ga0157375_10001744 Ga0157375_1000174413 189
207 3300013308 Ga0157375_10591540 Ga0157375_105915402 189
208 3300014325 Ga0163163_10052225 Ga0163163_100522252 189
209 3300014326 Ga0157380_10000100 Ga0157380_1000010018 189
210 3300014326 Ga0157380_10167761 Ga0157380_101677612 189
211 3300014969 Ga0157376_10047303 Ga0157376_100473033 189
212 3300017792 Ga0163161_10042381 Ga0163161_100423812 189
213 3300025899 Ga0207642_10092128 Ga0207642_100921282 189
214 3300025906 Ga0207699_10670793 Ga0207699_106707931 189
215 3300025908 Ga0207643_10400755 Ga0207643_104007551 189
216 3300025909 Ga0207705_10021886 Ga0207705_100218864 189
217 3300025926 Ga0207659_10000268 Ga0207659_1000026815 189
218 3300025934 Ga0207686_10000035 Ga0207686_1000003542 189
219 3300025934 Ga0207686_10004141 Ga0207686_100041415 189
220 3300025935 Ga0207709_10007787 Ga0207709_100077873 189
221 3300025938 Ga0207704_10000165 Ga0207704_1000016516 189
222 3300025945 Ga0207679_10178459 Ga0207679_101784593 189
223 3300026023 Ga0207677_10009506 Ga0207677_100095063 189
224 3300026041 Ga0207639_10930861 Ga0207639_109308612 189
225 3300026142 Ga0207698_10003292 Ga0207698_100032925 189
226 3300028379 Ga0268266_10013919 Ga0268266_100139193 189
227 3300028379 Ga0268266_10081482 Ga0268266_100814822 189
228 3300041486 Ga0451807_1999704 Ga0451807_1999704_120_728 189
229 3300044694 Ga0466963_0025857 Ga0466963_0025857_2273_2878 189
230 3300046454 Ga0495592_0114741 Ga0495592_0114741_250_852 189
231 3300046459 Ga0495629_0003016 Ga0495629_0003016_10246_10854 189
232 3300046460 Ga0495638_0006130 Ga0495638_0006130_5496_6101 189
233 3300046512 Ga0495610_0081263 Ga0495610_0081263_177_782 189
234 3300046517 Ga0495630_0000027 Ga0495630_0000027_102930_103535 189
235 3300046533 Ga0495640_0047264 Ga0495640_0047264_1017_1679 189
236 3300046674 Ga0495588_0000204 Ga0495588_0000204_36861_37466 189
237 3300046678 Ga0495599_0157634 Ga0495599_0157634_248_850 189
238 3300046683 Ga0495658_0018840 Ga0495658_0018840_1209_1814 189
239 3300046690 Ga0495624_0000200 Ga0495624_0000200_36160_36765 189
240 3300047319 Ga0495674_0000024 Ga0495674_0000024_97466_98128 189
241 3300047321 Ga0495676_0042721 Ga0495676_0042721_1888_2493 189
242 3300048905 Ga0496102_0000021 Ga0496102_0000021_31729_32337 189
243 3300048905 Ga0496102_0039645 Ga0496102_0039645_1695_2300 189
244 3300048906 Ga0496103_0000001 Ga0496103_0000001_563570_564178 189
245 3300048906 Ga0496103_0014413 Ga0496103_0014413_1594_2199 189
246 3300048907 Ga0496104_0000029 Ga0496104_0000029_44140_44745 189
247 3300048908 Ga0496105_0000002 Ga0496105_0000002_44140_44745 189
248 3300048908 Ga0496105_0255998 Ga0496105_0255998_770_1375 189
249 3300048910 Ga0496107_0508338 Ga0496107_0508338_216_836 189
250 3300048911 Ga0496108_0000239 Ga0496108_0000239_13519_14124 189
251 3300048912 Ga0496109_0000304 Ga0496109_0000304_42538_43143 189
252 3300048912 Ga0496109_0025267 Ga0496109_0025267_1121_1726 189
253 3300048913 Ga0496110_0002030 Ga0496110_0002030_6769_7374 189
254 3300048914 Ga0496111_0005503 Ga0496111_0005503_7394_7999 189
255 3300048917 Ga0496114_0524711 Ga0496114_0524711_191_799 189
256 3300048918 Ga0496115_0480406 Ga0496115_0480406_251_859 189
257 3300048920 Ga0496117_0001530 Ga0496117_0001530_17620_18225 189
258 3300048921 Ga0496118_0000289 Ga0496118_0000289_65142_65747 189
259 3300048923 Ga0496120_0066521 Ga0496120_0066521_90_695 189
260 3300048929 Ga0496126_0060086 Ga0496126_0060086_2073_2681 189
261 3300049578 Ga0501042_0015093 Ga0501042_0015093_672_1286 189
262 3300050509 nmdc:mga0qj67_175167_c1 nmdc:mga0qj67_175167_c1_583_1197 189
263 3300053085 Ga0495619_0003310 Ga0495619_0003310_4054_4659 189

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF21943

TetR_C_46

Tetracyclin repressor-like, C-terminal domain

104

207

0.96

PF00440

TetR_N

Bacterial regulatory proteins, tetR family

38

84

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
2qib-assembly1.cif.gz_A crystal structure of tetr-family transcriptional regulator from streptomyces coelicolor 0.8205 12 179
2g3b-assembly1.cif.gz_B crystal structure of putative tetr-family transcriptional regulator from rhodococcus sp. 0.8197 13 179
2qib-assembly1.cif.gz_B crystal structure of tetr-family transcriptional regulator from streptomyces coelicolor 0.8158 15 179
6o6o-assembly1.cif.gz_B structure of the regulator fasr from mycobacterium tuberculosis 0.8079 15 179
3lwj-assembly1.cif.gz_A-2 crystal structure of putative tetr-family transcriptional regulator (yp_752756.1) from syntrophomonas wolfei str. goettingen at 2.07 a resolution 0.7963 12 179
ID Description Score Start End Superfamily
3mvpB01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9156 13 54 1.10.10.60
2eh3A01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.8941 14 60 1.10.10.60
3b6cA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.8925 15 71 1.10.10.60
1pb6B01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.8886 11 61 1.10.10.60
2y2zA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.8773 15 67 1.10.10.60
ID Description Score Start End GO Terms
AF-A0A537XCR0-F1-model_v4 TetR/AcrR family transcriptional regulator 0.9443 1 179 GO:0000976
GO:0003700
AF-A0A7W0RCV0-F1-model_v4 TetR/AcrR family transcriptional regulator 0.9298 1 179 GO:0000976
GO:0003700
AF-A0A538C0N7-F1-model_v4 TetR/AcrR family transcriptional regulator 0.9044 1 179 GO:0000976
GO:0003700
AF-A0A537XCR0-F1-model_v4 TetR/AcrR family transcriptional regulator 0.8917 1 179 GO:0000976
GO:0003700
AF-H0E7S5-F1-model_v4 Transcriptional regulator TetR family 0.8898 1 179 GO:0000976
GO:0003700

Feature Viewer

pLDDT pTM Quality
88.4 0.8 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map