F372709

General Info

Members Datasets Scaffolds Average Seq Length
264 184 227 373

Family's Representative Sequence

Representative Sequence 3300031456|Ga0307513_10012407|Ga0307513_100124078
Length 417
Sequence VIGVISNKVAIKTANTRVCLLAMADRLRVAVAGVGFIGPVHVRAARLAGADVVGISGGDPSRVRAAAASLGVARVFDSSEALVGDPDVDVVHICTPNQLHADLARRALTAGKHVVCEKPLATTAAAAAELVALAAQVGRVAAVPFVYRFHPVVREARARIAAGEAGAIHLIHGCYLQDWLASPDDYNWRIDPALGGPSRAFADIGAHWCDLVEFTSGHRLTRLLARTKTAYAQRQAGTAHAFARPTGEGALVDRTAPPSGGAADRVHAPVVDVVGEDAVTMLFETDRGAAGTLVVSQISHGRKNRLWFELDGAREAIAFDQEDPERLWVGSREGQRIVLRDPARLSPAAARYATLPAGHAQGYGDAFAAFVADTYAAIRDGAAPDGLPMFPDGLRAARITEAVLASARSATWEEVPS

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2547132130 Stenotrophomonas maltophilia RR-10 Isolate Unclassified
3 2576861471 Stenotrophomonas rhizophila DSM 14405 Isolate Rhizosphere
4 2643221579 Pseudoxanthomonas sp. Root630 Isolate Unclassified
5 2643221593 Lysobacter sp. Root690 Isolate Unclassified
6 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
7 2747842428 Stenotrophomonas sp. WCS2014-113 Isolate Unclassified
8 2747842501 Xanthomonas sp. WCS2014-23 Isolate Unclassified
9 2765235840 Stenotrophomonas maltophilia AA1 Isolate Unclassified
10 2791354901 Actinophytocola xanthii 11-183 Isolate Rhizosphere
11 2795385472 Herbihabitans rhizosphaerae DSM 101727 Isolate Rhizosphere
12 2816332141 Stenotrophomonas muris 1190 (v2) (version 2) Isolate Unclassified
13 2818991457 Xanthomonas translucens 569 Isolate Unclassified
14 2842391507 Stenotrophomonas maltophilia SEMIA 4027 Isolate Nodule
15 2842757796 Stenotrophomonas sp. R-72406 Isolate Unclassified
16 2842780639 Pseudoxanthomonas sp. R-71986 Isolate Unclassified
17 2852649853 Stenotrophomonas sp. JAI102 Isolate Rhizosphere
18 2852684882 Xanthomonas sp. JAI131 Isolate Rhizosphere
19 2867302475 Micromonospora globbae WPS1-2 Isolate Unclassified
20 2874220319 Stenotrophomonas maltophilia PS5 Isolate Unclassified
21 2919089067 Stenotrophomonas sp. 1337 Isolate Rhizosphere
22 2919130084 Xanthomonas sp. 1678 Isolate Rhizosphere
23 2919134579 Stenotrophomonas geniculata 1733 Isolate Rhizosphere
24 2928496128 Stenotrophomonas indicatrix 1163 Isolate Unclassified
25 2929195423 Xanthomonas sp. R-73098 Hybrid assembly Isolate Unclassified
26 2931380184 Stenotrophomonas sp. DR822 Isolate Rhizosphere
27 2939622612 Stenotrophomonas sp. 2619 Isolate Rhizosphere
28 2939626828 Stenotrophomonas sp. 2694 Isolate Rhizosphere
29 2941475908 Stenotrophomonas rhizophila 2680 Isolate Rhizosphere
30 2941489479 Lysobacter enzymogenes 2943 Isolate Rhizosphere
31 2961047084 Stenotrophomonas maltophilia EP5 Isolate Unclassified
32 2974307012 Stenotrophomonas sp. SORGH_AS_0282 Isolate Unclassified
33 2977247770 Stenotrophomonas rhizophila SORGH_AS 457 Isolate Unclassified
34 2984514374 Stenotrophomonas sp. SORGH_AS282 Isolate Aerial Root
35 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
36 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
37 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
38 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
39 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
40 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
41 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
42 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
43 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
44 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
45 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
46 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
47 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
48 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
49 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
50 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
51 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
52 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
53 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
54 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
55 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
56 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
57 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
58 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
59 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
60 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
61 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
62 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
63 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
64 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
65 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
66 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
67 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
68 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
69 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
70 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
71 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
72 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
73 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
74 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
75 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
76 3300015689 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A02 Metagenome Rhizosphere
77 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
78 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
79 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
80 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
81 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
82 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
83 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
84 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
85 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
86 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
87 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
88 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
89 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
90 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
91 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
92 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
93 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
103 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
104 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
105 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
106 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
107 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
108 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
109 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
110 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
111 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
112 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
113 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
114 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
115 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
116 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
117 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
118 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
119 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
120 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
121 3300039145 Coralloid root microbial communities from Jiquipilas, Chiapas, Mexico - JP6-T1 Metagenome Unclassified
122 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
123 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
124 3300042115 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_080116_2642 Metagenome Rhizosphere
125 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
126 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
127 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
128 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
129 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
130 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
131 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
132 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
133 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
134 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
135 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
136 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
137 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
138 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
139 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
140 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
141 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
142 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
143 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
144 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
145 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
146 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
147 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
148 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
149 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
150 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
152 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
153 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
154 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
156 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
157 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
158 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
159 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
160 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
161 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
162 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
163 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
164 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
165 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
166 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
167 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
168 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
169 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
170 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
171 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
172 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
173 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
174 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
175 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
176 3300053159 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 endosphere Metagenome Endosphere
177 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
178 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
179 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
180 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
181 8002869464 Pseudoxanthomonas helianthi 110414 Isolate Unclassified
182 8021622325 Xanthomonas sp. LMG12462 Isolate Rhizosphere
183 8021648035 Xanthomonas sp. LMG 12461 Isolate Rhizosphere
184 8056060235 Nocardiopsis endophytica RSe5-2 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 85.98
Metatranscriptomes 0
Isolates 14.02

Biome Distribution

Category Percentage (%)
Aerial Root 0.38
Bulb 0
Endosphere 22.35
Nodule 0.38
Rhizoplane 0
Rhizosphere 49.24
Stem 0
Stem Tuber 0
Unclassified 27.65

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_3336443 2162886007 Bacteria 2235
2 JGI25150J39212_1000458 3300002774 Bacteria 17923
3 JGI25151J46595_10000016 3300003187 Bacteria 249712
4 JGI25151J46595_10000057 3300003187 Bacteria 151052
5 JGI25153J46596_10000041 3300003215 Bacteria 162103
6 rootH2_10000629 3300003320 Bacteria 16121
7 rootL2_10090116 3300003322 Bacteria 3208
8 rootH1_10013574 3300003323 Bacteria 4030
9 JGI25407J50210_10000345 3300003373 Bacteria 8658
10 Ga0055526_1000006 3300003771 Bacteria 330857
11 Ga0055537_1000003 3300003773 Bacteria 220933
12 Ga0055537_1000018 3300003773 Bacteria 123452
13 Ga0055524_1000009 3300003775 Bacteria 295254
14 Ga0055536_1010368 3300003781 Bacteria 3709
15 Ga0055536_1010372 3300003781 Bacteria 3708
16 Ga0055534_1000004 3300003784 Bacteria 295251
17 Ga0055534_1001119 3300003784 Bacteria 11371
18 Ga0055528_1000003 3300003790 Bacteria 330875
19 Ga0055528_1000990 3300003790 Bacteria 18873
20 Ga0055530_10000301 3300003791 Bacteria 44944
21 Ga0055530_10000566 3300003791 Bacteria 32028
22 Ga0055531_10013735 3300003794 Bacteria 3709
23 Ga0055531_10022625 3300003794 Bacteria 2388
24 Ga0065704_10000363 3300005289 Bacteria 43914
25 Ga0065704_10070190 3300005289 Bacteria 113837
26 Ga0070670_100001701 3300005331 Bacteria 17909
27 Ga0070689_100154017 3300005340 Bacteria 1855
28 Ga0070692_10106951 3300005345 Bacteria 1542
29 Ga0070668_100049073 3300005347 Bacteria 3248
30 Ga0070701_10013321 3300005438 Bacteria 3738
31 Ga0070678_100113252 3300005456 Bacteria 2126
32 Ga0068867_100112089 3300005459 Bacteria 2097
33 Ga0068854_100041414 3300005578 Bacteria 3254
34 Ga0068864_100071794 3300005618 Bacteria 3016
35 Ga0068866_10072559 3300005718 Bacteria 1824
36 Ga0068863_100155419 3300005841 Bacteria 2190
37 Ga0081455_10000630 3300005937 Bacteria 45684
38 Ga0081455_10006309 3300005937 Bacteria 12736
39 Ga0081455_10020274 3300005937 Bacteria 6266
40 Ga0081538_10000414 3300005981 Bacteria 48260
41 Ga0081538_10001787 3300005981 Bacteria 21697
42 Ga0081538_10004096 3300005981 Bacteria 13551
43 Ga0081538_10018289 3300005981 Bacteria 5273
44 Ga0075364_10120175 3300006051 Bacteria 1758
45 Ga0075431_100192526 3300006847 Bacteria 2089
46 Ga0105251_10000013 3300009011 Bacteria 163226
47 Ga0105251_10000376 3300009011 Bacteria 43779
48 Ga0105243_10015879 3300009148 Bacteria 5695
49 Ga0105243_10044694 3300009148 Bacteria 3476
50 Ga0105243_10051256 3300009148 Bacteria 3264
51 Ga0157373_10085535 3300013100 Bacteria 2223
52 Ga0157371_10006898 3300013102 Bacteria 9273
53 Ga0157371_10009645 3300013102 Bacteria 7591
54 Ga0157370_10229583 3300013104 Bacteria 1718
55 Ga0157370_10329644 3300013104 Bacteria 1408
56 Ga0157380_10283567 3300014326 Bacteria 1517
57 Ga0182008_10004569 3300014497 Bacteria 8061
58 Ga0182006_1031822 3300015261 Bacteria 2124
59 Ga0182007_10000099 3300015262 Bacteria 60975
60 Ga0182005_1000442 3300015265 Bacteria 22007
61 Ga0183360_10001 3300015689 Bacteria 3943671
62 Ga0163161_10056747 3300017792 Bacteria 2844
63 Ga0207425_1000044 3300025245 Bacteria 195202
64 Ga0207425_1000388 3300025245 Bacteria 29705
65 Ga0209759_1000434 3300025256 Bacteria 50075
66 Ga0209129_1000044 3300025258 Bacteria 298971
67 Ga0209565_1000001 3300025263 Bacteria 2950419
68 Ga0209565_1000031 3300025263 Bacteria 320341
69 Ga0209673_1000001 3300025273 Bacteria 3176258
70 Ga0209673_1000674 3300025273 Bacteria 49444
71 Ga0209675_1000001 3300025291 Bacteria 2950293
72 Ga0209675_1000015 3300025291 Bacteria 403517
73 Ga0209676_1000225 3300025292 Bacteria 124018
74 Ga0209676_1000570 3300025292 Bacteria 55557
75 Ga0209676_1000998 3300025292 Bacteria 33231
76 Ga0209025_1000006 3300025294 Bacteria 1153444
77 Ga0209025_1000012 3300025294 Bacteria 924362
78 Ga0209564_1000001 3300025295 Bacteria 3176258
79 Ga0209564_1000037 3300025295 Bacteria 414794
80 Ga0209758_1000018 3300025297 Bacteria 753320
81 Ga0209758_1004557 3300025297 Bacteria 11442
82 Ga0209050_1000201 3300025298 Bacteria 134028
83 Ga0209050_1000709 3300025298 Bacteria 49201
84 Ga0209050_1016019 3300025298 Bacteria 3098
85 Ga0209256_1000002 3300025299 Bacteria 1906740
86 Ga0209256_1002877 3300025299 Bacteria 13057
87 Ga0209256_1006929 3300025299 Bacteria 5792
88 Ga0207426_1031869 3300025302 Bacteria 1716
89 Ga0209051_1001496 3300025303 Bacteria 19555
90 Ga0209257_1000208 3300025304 Bacteria 141393
91 Ga0209257_1000273 3300025304 Bacteria 117663
92 Ga0209257_1001168 3300025304 Bacteria 33231
93 Ga0209257_1006058 3300025304 Bacteria 8050
94 Ga0207713_1000445 3300025735 Bacteria 43504
95 Ga0207713_1005721 3300025735 Bacteria 7708
96 Ga0207682_10094210 3300025893 Bacteria 1302
97 Ga0207650_10001485 3300025925 Bacteria 16814
98 Ga0207709_10020948 3300025935 Bacteria 3695
99 Ga0207709_10020956 3300025935 Bacteria 3694
100 Ga0207670_10058582 3300025936 Bacteria 2617
101 Ga0207669_10113968 3300025937 Bacteria 1819
102 Ga0207678_10084744 3300026067 Bacteria 2710
103 Ga0207676_10055617 3300026095 Bacteria 3108
104 Ga0207683_10142007 3300026121 Bacteria 2164
105 Ga0209371_1000004 3300027312 Bacteria 1098197
106 Ga0209371_1000011 3300027312 Bacteria 848456
107 Ga0307515_10003479 3300028794 Bacteria 33102
108 Ga0268256_1000005 3300030500 Bacteria 1082342
109 Ga0268256_1000011 3300030500 Bacteria 848625
110 Ga0316176_1200305 3300030732 Bacteria 3155
111 Ga0316183_1201842 3300030742 Bacteria 5228
112 Ga0316181_1208784 3300030744 Bacteria 4075
113 Ga0307513_10000001 3300031456 Bacteria 1660464
114 Ga0307513_10012407 3300031456 Bacteria 10522
115 Ga0307509_10002259 3300031507 Bacteria 31538
116 Ga0307509_10064018 3300031507 Bacteria 3870
117 Ga0307508_10020968 3300031616 Bacteria 5939
118 Ga0307508_10032389 3300031616 Bacteria 4722
119 Ga0307405_10008702 3300031731 Bacteria 5158
120 Ga0307413_10008410 3300031824 Bacteria 4872
121 Ga0307413_10117653 3300031824 Bacteria 1793
122 Ga0307406_10025294 3300031901 Bacteria 3553
123 Ga0307407_10023263 3300031903 Bacteria 3231
124 Ga0307412_10000190 3300031911 Bacteria 42868
125 Ga0307409_100032670 3300031995 Bacteria 3776
126 Ga0307414_10007107 3300032004 Bacteria 6281
127 Ga0307415_100010786 3300032126 Bacteria 5191
128 Ga0307507_10080964 3300033179 Bacteria 2859
129 Ga0237819_00014 3300038705 Bacteria 59581
130 Ga0237819_07720 3300038705 Bacteria 1527
131 Ga0237816_00706 3300039145 Bacteria 2810
132 Ga0439450_013972 3300042008 Bacteria 1621
133 Ga0439463_004990 3300042016 Bacteria 3307
134 Ga0450911_001877 3300042115 Bacteria 4441
135 Ga0466957_0000019 3300044842 Bacteria 61928
136 Ga0466960_0000425 3300044901 Bacteria 14505
137 Ga0466967_0130850 3300045976 Bacteria 2329
138 Ga0466967_0211090 3300045976 Bacteria 1841
139 Ga0495627_020284 3300046453 Bacteria 2217
140 Ga0495638_0017410 3300046460 Bacteria 4791
141 Ga0495606_0020981 3300046507 Bacteria 4795
142 Ga0495610_0052860 3300046512 Bacteria 1970
143 Ga0495643_0073091 3300046522 Bacteria 1797
144 Ga0495622_0079619 3300046557 Bacteria 1508
145 Ga0495668_0003853 3300046616 Bacteria 10975
146 Ga0495625_0163352 3300046660 Bacteria 1490
147 Ga0495672_0006440 3300047320 Bacteria 9090
148 Ga0496116_0000545 3300048919 Bacteria 50407
149 Ga0496116_0027863 3300048919 Bacteria 4104
150 Ga0496117_0009998 3300048920 Bacteria 8721
151 Ga0496117_0044956 3300048920 Bacteria 3194
152 Ga0496118_0001666 3300048921 Bacteria 32615
153 Ga0496118_0014548 3300048921 Bacteria 7356
154 Ga0496118_0026871 3300048921 Bacteria 4888
155 Ga0496118_0106529 3300048921 Bacteria 1875
156 Ga0496119_0000596 3300048922 Bacteria 48957
157 Ga0496119_0020623 3300048922 Bacteria 4799
158 Ga0496119_0169689 3300048922 Bacteria 1153
159 Ga0496120_0000879 3300048923 Bacteria 42390
160 Ga0496120_0007570 3300048923 Bacteria 8056
161 Ga0496121_0000036 3300048924 Bacteria 362643
162 Ga0496121_0039946 3300048924 Bacteria 4125
163 Ga0496121_0063993 3300048924 Bacteria 3001
164 Ga0496122_0000662 3300048925 Bacteria 69323
165 Ga0496122_0013400 3300048925 Bacteria 8029
166 Ga0496122_0027400 3300048925 Bacteria 4873
167 Ga0496122_0043179 3300048925 Bacteria 3535
168 Ga0496122_0140275 3300048925 Bacteria 1513
169 Ga0496123_0000478 3300048926 Bacteria 69650
170 Ga0496123_0001024 3300048926 Bacteria 42542
171 Ga0496123_0016193 3300048926 Bacteria 6069
172 Ga0496123_0116710 3300048926 Bacteria 1511
173 Ga0496123_0134188 3300048926 Bacteria 1365
174 Ga0496124_0000009 3300048927 Bacteria 734820
175 Ga0496124_0000390 3300048927 Bacteria 79997
176 Ga0496124_0019195 3300048927 Bacteria 6374
177 Ga0496124_0036870 3300048927 Bacteria 4258
178 Ga0496124_0043918 3300048927 Bacteria 3839
179 Ga0496124_0091318 3300048927 Bacteria 2482
180 Ga0496124_0107934 3300048927 Bacteria 2245
181 Ga0496125_0020613 3300048928 Bacteria 6184
182 Ga0496125_0021567 3300048928 Bacteria 6004
183 Ga0496125_0024331 3300048928 Bacteria 5572
184 Ga0496125_0035682 3300048928 Bacteria 4356
185 Ga0496126_0035164 3300048929 Bacteria 4697
186 Ga0501032_0105969 3300049569 Bacteria 1862
187 Ga0501033_0009765 3300049570 Bacteria 7372
188 Ga0501033_0045638 3300049570 Bacteria 3260
189 Ga0501034_0250881 3300049571 Bacteria 1714
190 Ga0501036_0014361 3300049572 Bacteria 6593
191 Ga0501040_0004744 3300049576 Bacteria 8818
192 Ga0501040_0169202 3300049576 Bacteria 1547
193 Ga0501042_0005355 3300049578 Bacteria 8251
194 Ga0501042_0013177 3300049578 Bacteria 5628
195 Ga0501046_0005099 3300049580 Bacteria 11783
196 Ga0501048_0010847 3300049582 Bacteria 6793
197 Ga0501072_0005856 3300049588 Bacteria 9365
198 Ga0501075_0005204 3300049591 Bacteria 8892
199 Ga0501076_0000880 3300049592 Bacteria 19523
200 Ga0501077_0000704 3300049593 Bacteria 20244
201 Ga0501077_0175341 3300049593 Bacteria 1362
202 Ga0501202_003134 3300049652 Bacteria 2816
203 Ga0501257_000659 3300049686 Bacteria 6883
204 Ga0501079_0007293 3300049741 Bacteria 8348
205 Ga0501081_0011014 3300049743 Bacteria 5913
206 Ga0501081_0209360 3300049743 Bacteria 1416
207 Ga0501083_0000162 3300049744 Bacteria 43696
208 Ga0501035_0082662 3300049822 Bacteria 2834
209 Ga0501044_0025011 3300049823 Bacteria 6331
210 Ga0501045_0002720 3300049824 Bacteria 12070
211 Ga0501045_0178982 3300049824 Bacteria 1580
212 Ga0500578_0032576 3300053086 Bacteria 3349
213 Ga0500646_0002062 3300053090 Bacteria 5241
214 Ga0500566_0013866 3300053094 Bacteria 4740
215 Ga0500554_045208 3300053102 Bacteria 1367
216 Ga0500595_031984 3300053119 Bacteria 1761
217 Ga0500614_012574 3300053123 Bacteria 1850
218 Ga0500642_0006220 3300053130 Bacteria 3912
219 Ga0500603_000739 3300053150 Bacteria 7969
220 Ga0500630_077341 3300053159 Bacteria 1563
221 Ga0500634_0000167 3300053161 Bacteria 21979
222 Ga0501084_0005795 3300054114 Bacteria 10163
223 Ga0501082_0004580 3300060353 Bacteria 12074
224 Ga0501082_0067643 3300060353 Bacteria 3077
225 Ga0530510_0002401 3300061734 Bacteria 12893
226 Ga0530510_0006082 3300061734 Bacteria 8381
227 Ga0530510_0009771 3300061734 Bacteria 6733

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300049571 Ga0501034_0250881 Ga0501034_0250881_165_1346 316
2 3300031731 Ga0307405_10008702 Ga0307405_100087024 330
3 3300031824 Ga0307413_10008410 Ga0307413_100084104 330
4 3300031901 Ga0307406_10025294 Ga0307406_100252942 330
5 3300031903 Ga0307407_10023263 Ga0307407_100232632 330
6 3300031995 Ga0307409_100032670 Ga0307409_1000326704 330
7 3300005718 Ga0068866_10072559 Ga0068866_100725591 331
8 3300005345 Ga0070692_10106951 Ga0070692_101069512 332
9 3300048928 Ga0496125_0024331 Ga0496125_0024331_972_2060 337
10 3300049593 Ga0501077_0175341 Ga0501077_0175341_21_1079 337
11 3300025893 Ga0207682_10094210 Ga0207682_100942101 338
12 3300031456 Ga0307513_10000001 Ga0307513_10000001547 338
13 3300014326 Ga0157380_10283567 Ga0157380_102835671 339
14 3300006051 Ga0075364_10120175 Ga0075364_101201752 341
15 3300048919 Ga0496116_0000545 Ga0496116_0000545_5979_7103 341
16 3300003373 JGI25407J50210_10000345 JGI25407J50210_100003453 342
17 3300005981 Ga0081538_10000414 Ga0081538_100004147 342
18 3300005340 Ga0070689_100154017 Ga0070689_1001540172 343
19 3300005438 Ga0070701_10013321 Ga0070701_100133213 343
20 3300025936 Ga0207670_10058582 Ga0207670_100585822 343
21 3300025937 Ga0207669_10113968 Ga0207669_101139682 343
22 3300049570 Ga0501033_0045638 Ga0501033_0045638_1105_2184 343
23 3300049578 Ga0501042_0005355 Ga0501042_0005355_1083_2159 343
24 3300049744 Ga0501083_0000162 Ga0501083_0000162_36524_37600 343
25 3300005937 Ga0081455_10020274 Ga0081455_100202742 344
26 3300005456 Ga0070678_100113252 Ga0070678_1001132522 349
27 3300005578 Ga0068854_100041414 Ga0068854_1000414144 349
28 3300026121 Ga0207683_10142007 Ga0207683_101420072 349
29 3300031911 Ga0307412_10000190 Ga0307412_100001907 349
30 3300032004 Ga0307414_10007107 Ga0307414_100071076 349
31 3300048921 Ga0496118_0026871 Ga0496118_0026871_469_1593 349
32 3300048925 Ga0496122_0043179 Ga0496122_0043179_2397_3521 349
33 3300048926 Ga0496123_0134188 Ga0496123_0134188_18_1142 349
34 iso_pu_bacteria 2643221678 2644440249 349
35 3300049652 Ga0501202_003134 Ga0501202_003134_119_1276 350
36 3300049686 Ga0501257_000659 Ga0501257_000659_3900_5057 350
37 3300053159 Ga0500630_077341 Ga0500630_077341_378_1505 350
38 3300013104 Ga0157370_10329644 Ga0157370_103296442 352
39 3300014497 Ga0182008_10004569 Ga0182008_100045692 352
40 3300017792 Ga0163161_10056747 Ga0163161_100567474 352
41 3300025302 Ga0207426_1031869 Ga0207426_10318692 352
42 3300030732 Ga0316176_1200305 Ga0316176_12003054 352
43 3300031616 Ga0307508_10020968 Ga0307508_100209683 352
44 3300031824 Ga0307413_10117653 Ga0307413_101176531 352
45 3300032126 Ga0307415_100010786 Ga0307415_1000107864 352
46 3300033179 Ga0307507_10080964 Ga0307507_100809642 352
47 3300048924 Ga0496121_0039946 Ga0496121_0039946_2773_3897 352
48 3300048925 Ga0496122_0013400 Ga0496122_0013400_6671_7795 352
49 3300048926 Ga0496123_0016193 Ga0496123_0016193_4663_5787 352
50 3300048927 Ga0496124_0019195 Ga0496124_0019195_3463_4587 352
51 3300048928 Ga0496125_0021567 Ga0496125_0021567_238_1362 352
52 3300013100 Ga0157373_10085535 Ga0157373_100855352 355
53 3300013102 Ga0157371_10006898 Ga0157371_100068989 355
54 3300013104 Ga0157370_10229583 Ga0157370_102295832 355
55 3300048920 Ga0496117_0009998 Ga0496117_0009998_217_1341 355
56 3300048921 Ga0496118_0014548 Ga0496118_0014548_582_1706 355
57 iso_pu_bacteria 2867302475 2867306717 355
58 3300049823 Ga0501044_0025011 Ga0501044_0025011_3047_4204 356
59 iso_pu_bacteria 2791354901 2791915068 356
60 iso_pu_bacteria 2795385472 2795792515 356
61 3300015262 Ga0182007_10000099 Ga0182007_100000998 358
62 3300015265 Ga0182005_1000442 Ga0182005_100044215 358
63 3300046557 Ga0495622_0079619 Ga0495622_0079619_159_1340 358
64 3300048919 Ga0496116_0027863 Ga0496116_0027863_2564_3688 358
65 3300053102 Ga0500554_045208 Ga0500554_045208_54_1235 358
66 3300053119 Ga0500595_031984 Ga0500595_031984_335_1516 358
67 3300053123 Ga0500614_012574 Ga0500614_012574_247_1428 358
68 iso_pu_bacteria 8056060235 8056063754 359
69 3300031616 Ga0307508_10032389 Ga0307508_100323894 360
70 3300005937 Ga0081455_10006309 Ga0081455_100063095 361
71 3300048928 Ga0496125_0020613 Ga0496125_0020613_1087_2211 361
72 3300030742 Ga0316183_1201842 Ga0316183_12018423 362
73 3300048922 Ga0496119_0169689 Ga0496119_0169689_34_1122 362
74 3300005981 Ga0081538_10004096 Ga0081538_1000409615 363
75 3300005981 Ga0081538_10018289 Ga0081538_100182892 363
76 3300042008 Ga0439450_013972 Ga0439450_013972_158_1381 363
77 3300042016 Ga0439463_004990 Ga0439463_004990_1323_2546 363
78 3300049576 Ga0501040_0169202 Ga0501040_0169202_161_1384 363
79 3300049743 Ga0501081_0209360 Ga0501081_0209360_21_1244 363
80 3300061734 Ga0530510_0006082 Ga0530510_0006082_5855_7078 363
81 3300025256 Ga0209759_1000434 Ga0209759_100043433 364
82 3300044842 Ga0466957_0000019 Ga0466957_0000019_44063_45196 364
83 3300053086 Ga0500578_0032576 Ga0500578_0032576_2196_3326 364
84 3300026067 Ga0207678_10084744 Ga0207678_100847441 366
85 3300031507 Ga0307509_10002259 Ga0307509_1000225918 366
86 iso_pu_bacteria 2547132130 2547500774 370
87 iso_pu_bacteria 2576861471 2578459251 370
88 iso_pu_bacteria 2643221579 2643908399 370
89 iso_pu_bacteria 2643221593 2643973609 370
90 iso_pu_bacteria 2747842428 2747949541 370
91 iso_pu_bacteria 2747842501 2748018238 370
92 iso_pu_bacteria 2765235840 2765578068 370
93 iso_pu_bacteria 2816332141 2816516131 370
94 iso_pu_bacteria 2818991457 2819663798 370
95 iso_pu_bacteria 2842391507 2842393681 370
96 iso_pu_bacteria 2842757796 2842759307 370
97 iso_pu_bacteria 2842780639 2842780990 370
98 iso_pu_bacteria 2852649853 2852651582 370
99 iso_pu_bacteria 2852684882 2852686490 370
100 iso_pu_bacteria 2874220319 2874220717 370
101 iso_pu_bacteria 2919089067 2919090747 370
102 iso_pu_bacteria 2919130084 2919132762 370
103 iso_pu_bacteria 2919134579 2919134620 370
104 iso_pu_bacteria 2928496128 2928496731 370
105 iso_pu_bacteria 2929195423 2929196930 370
106 iso_pu_bacteria 2931380184 2931381649 370
107 iso_pu_bacteria 2939622612 2939625159 370
108 iso_pu_bacteria 2939626828 2939627483 370
109 iso_pu_bacteria 2941475908 2941477009 370
110 iso_pu_bacteria 2941489479 2941490341 370
111 iso_pu_bacteria 2961047084 2961047482 370
112 iso_pu_bacteria 2974307012 2974309681 370
113 iso_pu_bacteria 2977247770 2977250429 370
114 iso_pu_bacteria 2984514374 2984515106 370
115 iso_pu_bacteria 8002869464 8002872089 370
116 iso_pu_bacteria 8021622325 8021625264 370
117 iso_pu_bacteria 8021648035 8021649723 370
118 3300053130 Ga0500642_0006220 Ga0500642_0006220_1462_2604 371
119 3300005459 Ga0068867_100112089 Ga0068867_1001120892 372
120 3300005618 Ga0068864_100071794 Ga0068864_1000717942 372
121 3300005841 Ga0068863_100155419 Ga0068863_1001554192 372
122 3300005937 Ga0081455_10000630 Ga0081455_1000063022 372
123 3300005981 Ga0081538_10001787 Ga0081538_1000178713 372
124 3300006847 Ga0075431_100192526 Ga0075431_1001925262 372
125 3300026095 Ga0207676_10055617 Ga0207676_100556172 372
126 3300028794 Ga0307515_10003479 Ga0307515_1000347923 372
127 3300031507 Ga0307509_10064018 Ga0307509_100640182 372
128 3300044901 Ga0466960_0000425 Ga0466960_0000425_6966_8138 372
129 3300045976 Ga0466967_0130850 Ga0466967_0130850_341_1495 372
130 3300048922 Ga0496119_0000596 Ga0496119_0000596_43302_44420 372
131 3300048923 Ga0496120_0007570 Ga0496120_0007570_6134_7252 372
132 3300049569 Ga0501032_0105969 Ga0501032_0105969_216_1445 372
133 3300049570 Ga0501033_0009765 Ga0501033_0009765_4125_5354 372
134 3300049572 Ga0501036_0014361 Ga0501036_0014361_5191_6420 372
135 3300049576 Ga0501040_0004744 Ga0501040_0004744_3377_4606 372
136 3300049578 Ga0501042_0013177 Ga0501042_0013177_1658_2887 372
137 3300049580 Ga0501046_0005099 Ga0501046_0005099_6435_7664 372
138 3300049582 Ga0501048_0010847 Ga0501048_0010847_4385_5614 372
139 3300049588 Ga0501072_0005856 Ga0501072_0005856_4939_6168 372
140 3300049591 Ga0501075_0005204 Ga0501075_0005204_6071_7300 372
141 3300049592 Ga0501076_0000880 Ga0501076_0000880_15309_16538 372
142 3300049593 Ga0501077_0000704 Ga0501077_0000704_3496_4725 372
143 3300049741 Ga0501079_0007293 Ga0501079_0007293_2298_3527 372
144 3300049743 Ga0501081_0011014 Ga0501081_0011014_4557_5786 372
145 3300049822 Ga0501035_0082662 Ga0501035_0082662_1518_2744 372
146 3300049824 Ga0501045_0002720 Ga0501045_0002720_4077_5306 372
147 3300049824 Ga0501045_0178982 Ga0501045_0178982_326_1483 372
148 3300053090 Ga0500646_0002062 Ga0500646_0002062_821_1951 372
149 3300053094 Ga0500566_0013866 Ga0500566_0013866_377_1507 372
150 3300053150 Ga0500603_000739 Ga0500603_000739_600_1730 372
151 3300054114 Ga0501084_0005795 Ga0501084_0005795_5683_6912 372
152 3300060353 Ga0501082_0004580 Ga0501082_0004580_2683_3912 372
153 3300060353 Ga0501082_0067643 Ga0501082_0067643_1132_2289 372
154 3300061734 Ga0530510_0002401 Ga0530510_0002401_5716_6945 372
155 3300061734 Ga0530510_0009771 Ga0530510_0009771_1466_2623 372
156 3300031456 Ga0307513_10012407 Ga0307513_100124078 373
157 3300045976 Ga0466967_0211090 Ga0466967_0211090_359_1513 373
158 2162886007 SwRhRL2b_contig_3336443 SwRhRL2b_0313.00007440 374
159 3300002774 JGI25150J39212_1000458 JGI25150J39212_100045814 374
160 3300003187 JGI25151J46595_10000016 JGI25151J46595_10000016122 374
161 3300003187 JGI25151J46595_10000057 JGI25151J46595_100000574 374
162 3300003215 JGI25153J46596_10000041 JGI25153J46596_1000004111 374
163 3300003320 rootH2_10000629 rootH2_100006295 374
164 3300003322 rootL2_10090116 rootL2_100901162 374
165 3300003323 rootH1_10013574 rootH1_100135742 374
166 3300003771 Ga0055526_1000006 Ga0055526_100000678 374
167 3300003773 Ga0055537_1000003 Ga0055537_1000003148 374
168 3300003773 Ga0055537_1000018 Ga0055537_100001878 374
169 3300003775 Ga0055524_1000009 Ga0055524_1000009148 374
170 3300003781 Ga0055536_1010368 Ga0055536_10103684 374
171 3300003781 Ga0055536_1010372 Ga0055536_10103724 374
172 3300003784 Ga0055534_1000004 Ga0055534_1000004148 374
173 3300003784 Ga0055534_1001119 Ga0055534_100111910 374
174 3300003790 Ga0055528_1000003 Ga0055528_1000003181 374
175 3300003790 Ga0055528_1000990 Ga0055528_100099011 374
176 3300003791 Ga0055530_10000301 Ga0055530_1000030112 374
177 3300003791 Ga0055530_10000566 Ga0055530_1000056612 374
178 3300003794 Ga0055531_10013735 Ga0055531_100137354 374
179 3300003794 Ga0055531_10022625 Ga0055531_100226252 374
180 3300005289 Ga0065704_10000363 Ga0065704_1000036312 374
181 3300005289 Ga0065704_10070190 Ga0065704_1007019067 374
182 3300005331 Ga0070670_100001701 Ga0070670_10000170111 374
183 3300005347 Ga0070668_100049073 Ga0070668_1000490732 374
184 3300009011 Ga0105251_10000013 Ga0105251_1000001329 374
185 3300009011 Ga0105251_10000376 Ga0105251_1000037610 374
186 3300009148 Ga0105243_10015879 Ga0105243_100158795 374
187 3300009148 Ga0105243_10044694 Ga0105243_100446943 374
188 3300009148 Ga0105243_10051256 Ga0105243_100512563 374
189 3300013102 Ga0157371_10009645 Ga0157371_100096452 374
190 3300015261 Ga0182006_1031822 Ga0182006_10318222 374
191 3300015689 Ga0183360_10001 Ga0183360_100011493 374
192 3300025245 Ga0207425_1000044 Ga0207425_1000044175 374
193 3300025245 Ga0207425_1000388 Ga0207425_100038816 374
194 3300025258 Ga0209129_1000044 Ga0209129_1000044101 374
195 3300025263 Ga0209565_1000001 Ga0209565_10000012243 374
196 3300025263 Ga0209565_1000031 Ga0209565_1000031236 374
197 3300025273 Ga0209673_1000001 Ga0209673_10000012243 374
198 3300025273 Ga0209673_1000674 Ga0209673_100067417 374
199 3300025291 Ga0209675_1000001 Ga0209675_1000001289 374
200 3300025291 Ga0209675_1000015 Ga0209675_1000015335 374
201 3300025292 Ga0209676_1000225 Ga0209676_100022510 374
202 3300025292 Ga0209676_1000570 Ga0209676_100057026 374
203 3300025292 Ga0209676_1000998 Ga0209676_100099826 374
204 3300025294 Ga0209025_1000006 Ga0209025_1000006882 374
205 3300025294 Ga0209025_1000012 Ga0209025_1000012399 374
206 3300025295 Ga0209564_1000001 Ga0209564_1000001451 374
207 3300025295 Ga0209564_1000037 Ga0209564_100003734 374
208 3300025297 Ga0209758_1000018 Ga0209758_1000018258 374
209 3300025297 Ga0209758_1004557 Ga0209758_100455710 374
210 3300025298 Ga0209050_1000201 Ga0209050_100020122 374
211 3300025298 Ga0209050_1000709 Ga0209050_100070922 374
212 3300025298 Ga0209050_1016019 Ga0209050_10160194 374
213 3300025299 Ga0209256_1000002 Ga0209256_10000021101 374
214 3300025299 Ga0209256_1002877 Ga0209256_10028775 374
215 3300025299 Ga0209256_1006929 Ga0209256_10069294 374
216 3300025303 Ga0209051_1001496 Ga0209051_100149620 374
217 3300025304 Ga0209257_1000208 Ga0209257_100020825 374
218 3300025304 Ga0209257_1000273 Ga0209257_100027385 374
219 3300025304 Ga0209257_1001168 Ga0209257_100116826 374
220 3300025304 Ga0209257_1006058 Ga0209257_10060586 374
221 3300025735 Ga0207713_1000445 Ga0207713_100044510 374
222 3300025735 Ga0207713_1005721 Ga0207713_10057214 374
223 3300025925 Ga0207650_10001485 Ga0207650_1000148511 374
224 3300025935 Ga0207709_10020948 Ga0207709_100209482 374
225 3300025935 Ga0207709_10020956 Ga0207709_100209562 374
226 3300027312 Ga0209371_1000004 Ga0209371_1000004773 374
227 3300027312 Ga0209371_1000011 Ga0209371_1000011520 374
228 3300030500 Ga0268256_1000005 Ga0268256_1000005274 374
229 3300030500 Ga0268256_1000011 Ga0268256_1000011520 374
230 3300030744 Ga0316181_1208784 Ga0316181_12087842 374
231 3300038705 Ga0237819_00014 Ga0237819_00014_36268_37392 374
232 3300038705 Ga0237819_07720 Ga0237819_07720_162_1286 374
233 3300039145 Ga0237816_00706 Ga0237816_00706_604_1728 374
234 3300042115 Ga0450911_001877 Ga0450911_001877_2998_4122 374
235 3300046453 Ga0495627_020284 Ga0495627_020284_551_1696 374
236 3300046460 Ga0495638_0017410 Ga0495638_0017410_238_1362 374
237 3300046507 Ga0495606_0020981 Ga0495606_0020981_3358_4488 374
238 3300046512 Ga0495610_0052860 Ga0495610_0052860_210_1334 374
239 3300046522 Ga0495643_0073091 Ga0495643_0073091_342_1466 374
240 3300046616 Ga0495668_0003853 Ga0495668_0003853_1014_2138 374
241 3300046660 Ga0495625_0163352 Ga0495625_0163352_323_1447 374
242 3300047320 Ga0495672_0006440 Ga0495672_0006440_539_1663 374
243 3300048920 Ga0496117_0044956 Ga0496117_0044956_487_1611 374
244 3300048921 Ga0496118_0001666 Ga0496118_0001666_2876_4000 374
245 3300048921 Ga0496118_0106529 Ga0496118_0106529_565_1689 374
246 3300048922 Ga0496119_0020623 Ga0496119_0020623_258_1382 374
247 3300048923 Ga0496120_0000879 Ga0496120_0000879_257_1381 374
248 3300048924 Ga0496121_0000036 Ga0496121_0000036_310442_311596 374
249 3300048924 Ga0496121_0063993 Ga0496121_0063993_228_1352 374
250 3300048925 Ga0496122_0000662 Ga0496122_0000662_67918_69042 374
251 3300048925 Ga0496122_0027400 Ga0496122_0027400_260_1384 374
252 3300048925 Ga0496122_0140275 Ga0496122_0140275_134_1258 374
253 3300048926 Ga0496123_0000478 Ga0496123_0000478_67917_69041 374
254 3300048926 Ga0496123_0001024 Ga0496123_0001024_41170_42294 374
255 3300048926 Ga0496123_0116710 Ga0496123_0116710_261_1385 374
256 3300048927 Ga0496124_0000009 Ga0496124_0000009_318799_319929 374
257 3300048927 Ga0496124_0000390 Ga0496124_0000390_15684_16808 374
258 3300048927 Ga0496124_0036870 Ga0496124_0036870_224_1348 374
259 3300048927 Ga0496124_0043918 Ga0496124_0043918_281_1405 374
260 3300048927 Ga0496124_0091318 Ga0496124_0091318_40_1164 374
261 3300048927 Ga0496124_0107934 Ga0496124_0107934_1042_2166 374
262 3300048928 Ga0496125_0035682 Ga0496125_0035682_3156_4280 374
263 3300048929 Ga0496126_0035164 Ga0496126_0035164_539_1663 374
264 3300053161 Ga0500634_0000167 Ga0500634_0000167_2923_4068 374

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01408

GFO_IDH_MocA

Oxidoreductase family, NAD-binding Rossmann fold

27

145

0.97

PF22725

GFO_IDH_MocA_C3

GFO/IDH/MocA C-terminal domain

153

318

0.96

PF03447

NAD_binding_3

Homoserine dehydrogenase, NAD binding domain

33

144

0.83

PF02894

GFO_IDH_MocA_C

Oxidoreductase family, C-terminal alpha/beta domain

157

415

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
6a3f-assembly1.cif.gz_B-2 levoglucosan dehydrogenase, apo form 0.9104 1 374
6a3f-assembly1.cif.gz_B-2 levoglucosan dehydrogenase, apo form 0.9081 1 374
6a3j-assembly1.cif.gz_C levoglucosan dehydrogenase, complex with nadh and l-sorbose 0.9055 3 374
4fb5-assembly1.cif.gz_A crystal structure of a probable oxidoreduxtase protein 0.905 2 372
6a3i-assembly1.cif.gz_C levoglucosan dehydrogenase, complex with nadh and levoglucosan 0.9023 2 372
ID Description Score Start End Superfamily
af_D3ZR63_4_130_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9459 5 129 3.40.50.720
af_B1WBV3_5_113_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9391 5 113 3.40.50.720
3ezyC01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9326 4 116 3.40.50.720
af_P42599_1_134_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9213 4 116 3.40.50.720
af_D3ZR63_4_130_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9175 5 129 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A2X3C520-F1-model_v4 Oxidoreductase (EC 1.-.-.-) 0.9584 4 112 GO:0000166
GO:0016491
AF-A0A521ZIK1-F1-model_v4 Gfo/Idh/MocA family oxidoreductase 0.9572 1 109 GO:0000166
AF-U5C345-F1-model_v4 Dehydrogenase 0.9565 1 372 GO:0000166
GO:0016491
AF-A0A7C6B575-F1-model_v4 Gfo/Idh/MocA family oxidoreductase 0.9545 71 373 GO:0000166
GO:0016491
AF-U5C345-F1-model_v4 Dehydrogenase 0.949 1 372 GO:0000166
GO:0016491

Feature Viewer

pLDDT pTM Quality
92.82 0.91 High
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Predicted Structure (AlphaFold2)

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