F372985

General Info

Members Datasets Scaffolds Average Seq Length
264 155 528 263

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2899803654|2899807414
Length 259
Sequence TWNINGVKARIANLCQWLESSAPDIVCLQEIKSVDEGFPRAEIEALGYHVETHGQKGFNGVALLSKLRPDEINRGLPGDDADEQARFIEGVFSVQGGVLRVCSLYLPNGNPPDDPVKYPYKLAWMERLQRFAENRLALEEPFILAGDYNVIPQPHDCHDPAVWAGDALFLPTTRQAFQRLESLGLTDAVRATCDTVPLYSFWDYQAGAWQKNNGIRIDHLLLSPEAADRLQSAQIEKHVRSWEKPSDHVPVTARFDFAA

Samples

Sample ID Description Type Environment
1 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
7 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
8 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
9 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
12 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
13 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
14 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
15 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
16 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
17 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
18 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
19 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
20 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
21 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
22 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
23 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
24 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
25 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
26 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
27 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
28 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
29 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
30 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
31 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
34 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
35 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
36 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
37 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
38 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
39 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
40 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
41 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
42 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
43 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
66 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
67 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
68 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
69 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
70 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
71 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
72 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
73 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
74 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
75 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
76 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
77 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
78 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
79 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
80 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
81 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
82 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
83 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
84 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
85 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
86 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
87 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
88 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
89 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
90 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
91 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
92 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
93 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
94 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
95 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
96 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
97 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
98 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
99 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
100 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
101 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
102 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
103 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
104 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
105 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
106 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
107 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
108 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
109 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
110 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
111 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
112 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
113 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
114 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
115 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
116 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
117 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
118 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
119 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
120 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
123 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
124 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
125 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
126 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
127 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
128 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
129 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
130 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
131 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
132 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
133 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
134 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
135 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
136 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
137 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
138 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
139 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
140 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
141 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
142 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
143 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
144 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
145 2899803654 Agrobacterium sp. a22-2 Isolate Unclassified
146 2558860983 Allorhizobium undicola ATCC 700741 Isolate Rhizoplane
147 2643221580 Devosia sp. Root635 Isolate Unclassified
148 2643221591 Devosia sp. Root685 Isolate Unclassified
149 2643221651 Afipia sp. Root123D2 Isolate Unclassified
150 2643221674 Devosia sp. Root436 Isolate Unclassified
151 2837651117 Pseudohoeflea suaedae YC6898 Isolate Unclassified
152 2909042592 Labrys sp. LIt4 Isolate Nodule
153 2932401849 Devosia sp. 2618 Isolate Rhizosphere
154 2939669807 Kaistia defluvii 3207 Isolate Rhizosphere
155 8045864390 Aurantimonas endophytica KCTC 52296 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 95.45
Metatranscriptomes 0.38
Isolates 4.17

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.23
Nodule 0.38
Rhizoplane 1.14
Rhizosphere 81.82
Stem 0
Stem Tuber 0
Unclassified 0.38

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24739J22299_10022604 3300001989 Bacteria 2230
2 Ga0070658_10112356 3300005327 Bacteria 2258
3 Ga0070658_10447695 3300005327 Bacteria 1112
4 Ga0070666_10298759 3300005335 Bacteria 1146
5 Ga0070680_100106246 3300005336 Bacteria 2334
6 Ga0070660_100084520 3300005339 Bacteria 2494
7 Ga0070660_100274898 3300005339 Bacteria 1378
8 Ga0070668_100020845 3300005347 Bacteria 4951
9 Ga0070659_100141866 3300005366 Bacteria 1956
10 Ga0070667_100165669 3300005367 Bacteria 1949
11 Ga0070709_10035347 3300005434 Bacteria 3036
12 Ga0070714_100010679 3300005435 Bacteria 7266
13 Ga0070713_100032785 3300005436 Bacteria 4153
14 Ga0070711_100082910 3300005439 Bacteria 2289
15 Ga0070663_100222393 3300005455 Bacteria 1483
16 Ga0070663_100295524 3300005455 Bacteria 1295
17 Ga0070679_100149828 3300005530 Bacteria 2310
18 Ga0070679_100381372 3300005530 Bacteria 1356
19 Ga0068853_100355997 3300005539 Bacteria 1362
20 Ga0068855_100055693 3300005563 Bacteria 4643
21 Ga0068855_100263189 3300005563 Bacteria 1920
22 Ga0068855_100381787 3300005563 Bacteria 1547
23 Ga0068857_100016730 3300005577 Bacteria 6424
24 Ga0068854_100063321 3300005578 Bacteria 2684
25 Ga0068856_100098004 3300005614 Bacteria 2922
26 Ga0068856_100729896 3300005614 Bacteria 1011
27 Ga0068860_100029848 3300005843 Bacteria 5246
28 Ga0075365_10006088 3300006038 Bacteria 6591
29 Ga0075363_100032927 3300006048 Bacteria 2696
30 Ga0075364_10029280 3300006051 Bacteria 3531
31 Ga0075367_10072847 3300006178 Bacteria 2069
32 Ga0075369_10022640 3300006186 Bacteria 2593
33 Ga0075428_100049507 3300006844 Bacteria 4610
34 Ga0075430_100009979 3300006846 Bacteria 8034
35 Ga0075431_100002581 3300006847 Bacteria 17505
36 Ga0075429_100014043 3300006880 Bacteria 6941
37 Ga0105240_10040895 3300009093 Bacteria 5923
38 Ga0111539_10003260 3300009094 Bacteria 21453
39 Ga0114129_10001565 3300009147 Bacteria 31048
40 Ga0105241_10378608 3300009174 Bacteria 1236
41 Ga0105237_10000172 3300009545 Bacteria 90675
42 Ga0105237_10157003 3300009545 Bacteria 2272
43 Ga0105237_10408543 3300009545 Bacteria 1362
44 Ga0105238_10026494 3300009551 Bacteria 5911
45 Ga0105239_10003701 3300010375 Bacteria 18617
46 Ga0105239_10055696 3300010375 Bacteria 4337
47 Ga0157371_10029253 3300013102 Bacteria 3987
48 Ga0157372_10169977 3300013307 Unclassified 2522
49 Ga0163163_10013017 3300014325 Bacteria 7598
50 Ga0182005_1007098 3300015265 Bacteria 3381
51 Ga0207427_101789 3300025231 Bacteria 6948
52 Ga0209233_1000710 3300025261 Bacteria 15543
53 Ga0209233_1029645 3300025261 Bacteria 1298
54 Ga0207680_10317226 3300025903 Bacteria 1089
55 Ga0207647_10013255 3300025904 Bacteria 5721
56 Ga0207699_10013393 3300025906 Bacteria 4196
57 Ga0207699_10076669 3300025906 Bacteria 2060
58 Ga0207705_10005690 3300025909 Bacteria 9310
59 Ga0207705_10030523 3300025909 Bacteria 3846
60 Ga0207705_10109707 3300025909 Bacteria 2038
61 Ga0207695_10068724 3300025913 Bacteria 3629
62 Ga0207671_10001685 3300025914 Bacteria 25022
63 Ga0207663_10036961 3300025916 Bacteria 2941
64 Ga0207660_10428136 3300025917 Bacteria 1068
65 Ga0207657_10046175 3300025919 Bacteria 3816
66 Ga0207652_10132170 3300025921 Bacteria 2227
67 Ga0207694_10023997 3300025924 Bacteria 4632
68 Ga0207700_10167985 3300025928 Bacteria 1827
69 Ga0207664_10144850 3300025929 Bacteria 2013
70 Ga0207667_10023316 3300025949 Bacteria 6816
71 Ga0207667_10033321 3300025949 Bacteria 5540
72 Ga0207667_10038373 3300025949 Bacteria 5117
73 Ga0207667_10194981 3300025949 Bacteria 2078
74 Ga0207668_10036217 3300025972 Bacteria 3292
75 Ga0207640_10056563 3300025981 Bacteria 2576
76 Ga0207640_10466388 3300025981 Bacteria 1044
77 Ga0207658_10115031 3300025986 Bacteria 2134
78 Ga0207639_10002452 3300026041 Bacteria 12441
79 Ga0207639_10026141 3300026041 Bacteria 4240
80 Ga0207678_10036293 3300026067 Bacteria 4291
81 Ga0207678_10304086 3300026067 Bacteria 1371
82 Ga0207702_10045975 3300026078 Bacteria 3673
83 Ga0207702_10600665 3300026078 Bacteria 1080
84 Ga0207674_10028639 3300026116 Bacteria 5875
85 Ga0207674_10432947 3300026116 Bacteria 1271
86 Ga0268266_10001618 3300028379 Bacteria 26267
87 Ga0265325_10000055 3300031241 Bacteria 77409
88 Ga0265325_10044803 3300031241 Bacteria 2302
89 Ga0265340_10032619 3300031247 Bacteria 2599
90 Ga0265339_10001686 3300031249 Bacteria 16305
91 Ga0265331_10023613 3300031250 Bacteria 3122
92 Ga0265316_10093016 3300031344 Bacteria 2298
93 Ga0265316_10158785 3300031344 Bacteria 1691
94 Ga0307408_100022230 3300031548 Bacteria 4307
95 Ga0265313_10020283 3300031595 Bacteria 3670
96 Ga0265313_10021836 3300031595 Bacteria 3489
97 Ga0265314_10002282 3300031711 Bacteria 19846
98 Ga0265314_10012308 3300031711 Bacteria 6990
99 Ga0265314_10191231 3300031711 Bacteria 1218
100 Ga0307516_10027854 3300031730 Bacteria 5726
101 Ga0307414_10020286 3300032004 Bacteria 4140
102 Ga0307414_10223768 3300032004 Bacteria 1546
103 Ga0307414_10243792 3300032004 Bacteria 1489
104 Ga0307414_10493478 3300032004 Bacteria 1082
105 Ga0316593_10015743 3300032168 Bacteria 2281
106 Ga0373943_0109277 3300035170 Bacteria 1456
107 Ga0373927_0328497 3300035695 Bacteria 1007
108 Ga0373947_0300615 3300035725 Bacteria 1070
109 Ga0373925_0138049 3300037068 Bacteria 1906
110 Ga0395899_0007549 3300037312 Bacteria 8397
111 Ga0395900_0094682 3300037418 Bacteria 3068
112 Ga0395898_0002807 3300037466 Bacteria 19970
113 Ga0395898_0119946 3300037466 Bacteria 2520
114 Ga0395898_0844686 3300037466 Bacteria 855
115 Ga0395905_0358071 3300037471 Bacteria 1352
116 Ga0395901_0021733 3300038443 Bacteria 6574
117 Ga0395901_0409191 3300038443 Bacteria 1393
118 Ga0395901_0519676 3300038443 Bacteria 1210
119 Ga0395901_0566196 3300038443 Bacteria 1150
120 Ga0439465_0043727 3300041413 Bacteria 1454
121 Ga0466957_0200436 3300044842 Bacteria 1311
122 Ga0495672_0043496 3300047320 Bacteria 2700
123 Ga0496107_0045255 3300048910 Bacteria 3165
124 Ga0496110_0262499 3300048913 Bacteria 1572
125 Ga0496118_0073755 3300048921 Bacteria 2443
126 Ga0496120_0010024 3300048923 Bacteria 6654
127 Ga0496120_0116935 3300048923 Bacteria 1384
128 Ga0496121_0000612 3300048924 Bacteria 66397
129 Ga0496124_0498200 3300048927 Bacteria 817
130 Ga0496125_0000217 3300048928 Bacteria 117498
131 Ga0496126_0021125 3300048929 Bacteria 6366
132 Ga0496126_0021656 3300048929 Bacteria 6274
133 Ga0496126_0317753 3300048929 Bacteria 1281
134 Ga0501031_0017275 3300049568 Bacteria 4688
135 Ga0501032_0025126 3300049569 Bacteria 4107
136 Ga0501032_0137417 3300049569 Bacteria 1611
137 Ga0501033_0000098 3300049570 Bacteria 82803
138 Ga0501033_0008987 3300049570 Bacteria 7714
139 Ga0501033_0015666 3300049570 Bacteria 5747
140 Ga0501033_0038690 3300049570 Bacteria 3564
141 Ga0501033_0064894 3300049570 Bacteria 2686
142 Ga0501033_0152405 3300049570 Bacteria 1667
143 Ga0501033_0200017 3300049570 Bacteria 1427
144 Ga0501034_0001102 3300049571 Bacteria 37998
145 Ga0501034_0001272 3300049571 Bacteria 34179
146 Ga0501034_0051892 3300049571 Bacteria 4134
147 Ga0501034_0092603 3300049571 Bacteria 3019
148 Ga0501034_0253336 3300049571 Bacteria 1704
149 Ga0501036_0000049 3300049572 Bacteria 75400
150 Ga0501036_0060341 3300049572 Bacteria 3213
151 Ga0501036_0101791 3300049572 Bacteria 2430
152 Ga0501037_0000069 3300049573 Bacteria 95277
153 Ga0501037_0000753 3300049573 Bacteria 24482
154 Ga0501037_0373123 3300049573 Bacteria 981
155 Ga0501038_0000034 3300049574 Bacteria 128854
156 Ga0501038_0037063 3300049574 Bacteria 4278
157 Ga0501038_0281534 3300049574 Bacteria 1309
158 Ga0501039_0000090 3300049575 Bacteria 63919
159 Ga0501042_0314326 3300049578 Bacteria 1132
160 Ga0501043_0000031 3300049579 Bacteria 140707
161 Ga0501043_0000130 3300049579 Bacteria 69795
162 Ga0501043_0032843 3300049579 Bacteria 4082
163 Ga0501046_0000213 3300049580 Bacteria 60602
164 Ga0501046_0034446 3300049580 Bacteria 4086
165 Ga0501047_0001193 3300049581 Bacteria 25735
166 Ga0501047_0002568 3300049581 Bacteria 17330
167 Ga0501047_0020091 3300049581 Bacteria 6414
168 Ga0501047_0029141 3300049581 Bacteria 5323
169 Ga0501047_0308779 3300049581 Bacteria 1423
170 Ga0501048_0001548 3300049582 Bacteria 17463
171 Ga0501048_0173969 3300049582 Bacteria 1526
172 Ga0501067_0001256 3300049583 Bacteria 13799
173 Ga0501068_0000197 3300049584 Bacteria 28590
174 Ga0501068_0205186 3300049584 Bacteria 1251
175 Ga0501069_0000362 3300049585 Bacteria 20433
176 Ga0501069_0002104 3300049585 Bacteria 10029
177 Ga0501070_0003800 3300049586 Bacteria 13038
178 Ga0501070_0006517 3300049586 Bacteria 9928
179 Ga0501070_0007315 3300049586 Bacteria 9377
180 Ga0501070_0009992 3300049586 Bacteria 8026
181 Ga0501070_0059516 3300049586 Bacteria 3167
182 Ga0501070_0128790 3300049586 Bacteria 2091
183 Ga0501070_0150621 3300049586 Bacteria 1919
184 Ga0501070_0211911 3300049586 Bacteria 1590
185 Ga0501071_0026819 3300049587 Bacteria 4048
186 Ga0501071_0410072 3300049587 Bacteria 1035
187 Ga0501072_0000146 3300049588 Bacteria 52958
188 Ga0501072_0290398 3300049588 Bacteria 1300
189 Ga0501072_0329849 3300049588 Bacteria 1212
190 Ga0501073_0029277 3300049589 Bacteria 3935
191 Ga0501073_0065230 3300049589 Bacteria 2539
192 Ga0501073_0117905 3300049589 Bacteria 1840
193 Ga0501073_0180756 3300049589 Bacteria 1460
194 Ga0501074_0001890 3300049590 Bacteria 14387
195 Ga0501074_0004186 3300049590 Bacteria 10310
196 Ga0501079_0043351 3300049741 Bacteria 3472
197 Ga0501079_0450118 3300049741 Bacteria 1011
198 Ga0501080_0000379 3300049742 Bacteria 34215
199 Ga0501080_0013625 3300049742 Bacteria 7487
200 Ga0501080_0016292 3300049742 Bacteria 6862
201 Ga0501080_0128246 3300049742 Bacteria 2348
202 Ga0501083_0001104 3300049744 Bacteria 18056
203 Ga0501083_0001109 3300049744 Bacteria 18027
204 Ga0501083_0102595 3300049744 Bacteria 1886
205 Ga0501035_0000036 3300049822 Bacteria 165008
206 Ga0501035_0003490 3300049822 Bacteria 15036
207 Ga0501035_0008600 3300049822 Bacteria 9499
208 Ga0501035_0018367 3300049822 Bacteria 6444
209 Ga0501035_0046884 3300049822 Bacteria 3884
210 Ga0501035_0051191 3300049822 Bacteria 3698
211 Ga0501035_0068793 3300049822 Bacteria 3139
212 Ga0501035_0116926 3300049822 Bacteria 2333
213 Ga0501044_0000011 3300049823 Bacteria 257385
214 Ga0501044_0004850 3300049823 Bacteria 15038
215 Ga0501044_0023247 3300049823 Bacteria 6595
216 Ga0501044_0052430 3300049823 Bacteria 4203
217 Ga0501044_0107284 3300049823 Bacteria 2804
218 Ga0501044_0116967 3300049823 Bacteria 2670
219 Ga0501044_0186375 3300049823 Bacteria 2039
220 Ga0501044_0246920 3300049823 Bacteria 1727
221 Ga0501044_0306721 3300049823 Bacteria 1515
222 Ga0501044_0376515 3300049823 Bacteria 1335
223 Ga0501044_0625875 3300049823 Bacteria 967
224 Ga0501045_0025834 3300049824 Bacteria 4222
225 Ga0501045_0230770 3300049824 Bacteria 1378
226 nmdc:mga03n38_78534_c1 3300050490 Bacteria 1545
227 nmdc:mga00v17_29217_c1 3300050491 Bacteria 3234
228 nmdc:mga06z11_49730_c1 3300050494 Bacteria 2140
229 nmdc:mga05p37_14_c1 3300050507 Bacteria 137209
230 nmdc:mga09592_3973_c1 3300050508 Bacteria 11911
231 nmdc:mga0qj67_94929_c1 3300050509 Bacteria 2400
232 nmdc:mga06r32_1943_c1 3300050510 Bacteria 18422
233 nmdc:mga0sz30_144805_c1 3300050516 Bacteria 1050
234 Ga0500643_005624 3300053087 Bacteria 5366
235 Ga0500644_0003835 3300053088 Bacteria 3737
236 Ga0500651_0047548 3300053093 Bacteria 2696
237 Ga0500566_0014436 3300053094 Bacteria 4644
238 Ga0500566_0037092 3300053094 Bacteria 2825
239 Ga0500595_000139 3300053119 Bacteria 47423
240 Ga0500568_0025069 3300053139 Bacteria 2520
241 Ga0500568_0038017 3300053139 Bacteria 1950
242 Ga0500604_0000059 3300053151 Bacteria 39804
243 Ga0500604_0016664 3300053151 Bacteria 2027
244 Ga0500616_0000006 3300053153 Bacteria 944738
245 Ga0500634_0000004 3300053161 Bacteria 214946
246 Ga0500636_0017425 3300053177 Bacteria 4242
247 Ga0500645_000502 3300053730 Bacteria 26442
248 Ga0500645_037836 3300053730 Bacteria 1432
249 Ga0501084_0002564 3300054114 Bacteria 14640
250 Ga0501082_0003475 3300060353 Bacteria 13745
251 Ga0501082_0031201 3300060353 Bacteria 4594
252 Ga0501082_0206288 3300060353 Bacteria 1710
253 Ga0466962_0032354 3300061719 Bacteria 2504
254 2899807414 2899803654 Bacteria 5577784
255 2561468945 2558860983 Bacteria 4133860
256 2643912437 2643221580 Bacteria 3816678
257 2643963214 2643221591 Bacteria 4397626
258 2644288431 2643221651 Bacteria 4798932
259 2644410757 2643221674 Bacteria 3919126
260 2837652938 2837651117 Bacteria 3772164
261 2909045887 2909042592 Bacteria 6499737
262 2932403496 2932401849 Bacteria 4262978
263 2939670960 2939669807 Bacteria 5028511
264 8045865151 8045864390 Bacteria 5043873
265 JGI24739J22299_10022604
266 Ga0070658_10112356
267 Ga0070658_10447695
268 Ga0070666_10298759
269 Ga0070680_100106246
270 Ga0070660_100084520
271 Ga0070660_100274898
272 Ga0070668_100020845
273 Ga0070659_100141866
274 Ga0070667_100165669
275 Ga0070709_10035347
276 Ga0070714_100010679
277 Ga0070713_100032785
278 Ga0070711_100082910
279 Ga0070663_100222393
280 Ga0070663_100295524
281 Ga0070679_100149828
282 Ga0070679_100381372
283 Ga0068853_100355997
284 Ga0068855_100055693
285 Ga0068855_100263189
286 Ga0068855_100381787
287 Ga0068857_100016730
288 Ga0068854_100063321
289 Ga0068856_100098004
290 Ga0068856_100729896
291 Ga0068860_100029848
292 Ga0075365_10006088
293 Ga0075363_100032927
294 Ga0075364_10029280
295 Ga0075367_10072847
296 Ga0075369_10022640
297 Ga0075428_100049507
298 Ga0075430_100009979
299 Ga0075431_100002581
300 Ga0075429_100014043
301 Ga0105240_10040895
302 Ga0111539_10003260
303 Ga0114129_10001565
304 Ga0105241_10378608
305 Ga0105237_10000172
306 Ga0105237_10157003
307 Ga0105237_10408543
308 Ga0105238_10026494
309 Ga0105239_10003701
310 Ga0105239_10055696
311 Ga0157371_10029253
312 Ga0157372_10169977
313 Ga0163163_10013017
314 Ga0182005_1007098
315 Ga0207427_101789
316 Ga0209233_1000710
317 Ga0209233_1029645
318 Ga0207680_10317226
319 Ga0207647_10013255
320 Ga0207699_10013393
321 Ga0207699_10076669
322 Ga0207705_10005690
323 Ga0207705_10030523
324 Ga0207705_10109707
325 Ga0207695_10068724
326 Ga0207671_10001685
327 Ga0207663_10036961
328 Ga0207660_10428136
329 Ga0207657_10046175
330 Ga0207652_10132170
331 Ga0207694_10023997
332 Ga0207700_10167985
333 Ga0207664_10144850
334 Ga0207667_10023316
335 Ga0207667_10033321
336 Ga0207667_10038373
337 Ga0207667_10194981
338 Ga0207668_10036217
339 Ga0207640_10056563
340 Ga0207640_10466388
341 Ga0207658_10115031
342 Ga0207639_10002452
343 Ga0207639_10026141
344 Ga0207678_10036293
345 Ga0207678_10304086
346 Ga0207702_10045975
347 Ga0207702_10600665
348 Ga0207674_10028639
349 Ga0207674_10432947
350 Ga0268266_10001618
351 Ga0265325_10000055
352 Ga0265325_10044803
353 Ga0265340_10032619
354 Ga0265339_10001686
355 Ga0265331_10023613
356 Ga0265316_10093016
357 Ga0265316_10158785
358 Ga0307408_100022230
359 Ga0265313_10020283
360 Ga0265313_10021836
361 Ga0265314_10002282
362 Ga0265314_10012308
363 Ga0265314_10191231
364 Ga0307516_10027854
365 Ga0307414_10020286
366 Ga0307414_10223768
367 Ga0307414_10243792
368 Ga0307414_10493478
369 Ga0316593_10015743
370 Ga0373943_0109277
371 Ga0373927_0328497
372 Ga0373947_0300615
373 Ga0373925_0138049
374 Ga0395899_0007549
375 Ga0395900_0094682
376 Ga0395898_0002807
377 Ga0395898_0119946
378 Ga0395898_0844686
379 Ga0395905_0358071
380 Ga0395901_0021733
381 Ga0395901_0409191
382 Ga0395901_0519676
383 Ga0395901_0566196
384 Ga0439465_0043727
385 Ga0466957_0200436
386 Ga0495672_0043496
387 Ga0496107_0045255
388 Ga0496110_0262499
389 Ga0496118_0073755
390 Ga0496120_0010024
391 Ga0496120_0116935
392 Ga0496121_0000612
393 Ga0496124_0498200
394 Ga0496125_0000217
395 Ga0496126_0021125
396 Ga0496126_0021656
397 Ga0496126_0317753
398 Ga0501031_0017275
399 Ga0501032_0025126
400 Ga0501032_0137417
401 Ga0501033_0000098
402 Ga0501033_0008987
403 Ga0501033_0015666
404 Ga0501033_0038690
405 Ga0501033_0064894
406 Ga0501033_0152405
407 Ga0501033_0200017
408 Ga0501034_0001102
409 Ga0501034_0001272
410 Ga0501034_0051892
411 Ga0501034_0092603
412 Ga0501034_0253336
413 Ga0501036_0000049
414 Ga0501036_0060341
415 Ga0501036_0101791
416 Ga0501037_0000069
417 Ga0501037_0000753
418 Ga0501037_0373123
419 Ga0501038_0000034
420 Ga0501038_0037063
421 Ga0501038_0281534
422 Ga0501039_0000090
423 Ga0501042_0314326
424 Ga0501043_0000031
425 Ga0501043_0000130
426 Ga0501043_0032843
427 Ga0501046_0000213
428 Ga0501046_0034446
429 Ga0501047_0001193
430 Ga0501047_0002568
431 Ga0501047_0020091
432 Ga0501047_0029141
433 Ga0501047_0308779
434 Ga0501048_0001548
435 Ga0501048_0173969
436 Ga0501067_0001256
437 Ga0501068_0000197
438 Ga0501068_0205186
439 Ga0501069_0000362
440 Ga0501069_0002104
441 Ga0501070_0003800
442 Ga0501070_0006517
443 Ga0501070_0007315
444 Ga0501070_0009992
445 Ga0501070_0059516
446 Ga0501070_0128790
447 Ga0501070_0150621
448 Ga0501070_0211911
449 Ga0501071_0026819
450 Ga0501071_0410072
451 Ga0501072_0000146
452 Ga0501072_0290398
453 Ga0501072_0329849
454 Ga0501073_0029277
455 Ga0501073_0065230
456 Ga0501073_0117905
457 Ga0501073_0180756
458 Ga0501074_0001890
459 Ga0501074_0004186
460 Ga0501079_0043351
461 Ga0501079_0450118
462 Ga0501080_0000379
463 Ga0501080_0013625
464 Ga0501080_0016292
465 Ga0501080_0128246
466 Ga0501083_0001104
467 Ga0501083_0001109
468 Ga0501083_0102595
469 Ga0501035_0000036
470 Ga0501035_0003490
471 Ga0501035_0008600
472 Ga0501035_0018367
473 Ga0501035_0046884
474 Ga0501035_0051191
475 Ga0501035_0068793
476 Ga0501035_0116926
477 Ga0501044_0000011
478 Ga0501044_0004850
479 Ga0501044_0023247
480 Ga0501044_0052430
481 Ga0501044_0107284
482 Ga0501044_0116967
483 Ga0501044_0186375
484 Ga0501044_0246920
485 Ga0501044_0306721
486 Ga0501044_0376515
487 Ga0501044_0625875
488 Ga0501045_0025834
489 Ga0501045_0230770
490 nmdc:mga03n38_78534_c1
491 nmdc:mga00v17_29217_c1
492 nmdc:mga06z11_49730_c1
493 nmdc:mga05p37_14_c1
494 nmdc:mga09592_3973_c1
495 nmdc:mga0qj67_94929_c1
496 nmdc:mga06r32_1943_c1
497 nmdc:mga0sz30_144805_c1
498 Ga0500643_005624
499 Ga0500644_0003835
500 Ga0500651_0047548
501 Ga0500566_0014436
502 Ga0500566_0037092
503 Ga0500595_000139
504 Ga0500568_0025069
505 Ga0500568_0038017
506 Ga0500604_0000059
507 Ga0500604_0016664
508 Ga0500616_0000006
509 Ga0500634_0000004
510 Ga0500636_0017425
511 Ga0500645_000502
512 Ga0500645_037836
513 Ga0501084_0002564
514 Ga0501082_0003475
515 Ga0501082_0031201
516 Ga0501082_0206288
517 Ga0466962_0032354
518 2899807414
519 2561468945
520 2643912437
521 2643963214
522 2644288431
523 2644410757
524 2837652938
525 2909045887
526 2932403496
527 2939670960
528 8045865151

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03372

Exo_endo_phos

Endonuclease/Exonuclease/phosphatase family

1

248

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
6fke-assembly1.cif.gz_A structure of 3' phosphatase nexo (d146n) from neisseria bound to product dna hairpin 0.961 1 259
2jc4-assembly1.cif.gz_A 3'-5' exonuclease (nexo) from neisseria meningitidis 0.9585 1 259
2jc4-assembly1.cif.gz_A 3'-5' exonuclease (nexo) from neisseria meningitidis 0.9512 1 259
6fke-assembly1.cif.gz_A structure of 3' phosphatase nexo (d146n) from neisseria bound to product dna hairpin 0.9501 1 259
1ako-assembly1.cif.gz_A exonuclease iii from escherichia coli 0.9425 1 258
ID Description Score Start End Superfamily
6fk4A00 Alpha Beta;4-Layer Sandwich;Deoxyribonuclease I; Chain A;Endonuclease/exonuclease/phosphatase 0.9607 1 259 3.60.10.10
6fk4A00 Alpha Beta;4-Layer Sandwich;Deoxyribonuclease I; Chain A;Endonuclease/exonuclease/phosphatase 0.9498 1 259 3.60.10.10
af_P09030_1_268_3.60.10.10 Alpha Beta;4-Layer Sandwich;Deoxyribonuclease I; Chain A;Endonuclease/exonuclease/phosphatase 0.9386 1 258 3.60.10.10
2voaB00 Alpha Beta;4-Layer Sandwich;Deoxyribonuclease I; Chain A;Endonuclease/exonuclease/phosphatase 0.9345 1 260 3.60.10.10
af_P96273_24_289_3.60.10.10 Alpha Beta;4-Layer Sandwich;Deoxyribonuclease I; Chain A;Endonuclease/exonuclease/phosphatase 0.9302 1 258 3.60.10.10
ID Description Score Start End GO Terms
AF-A0A523JTZ4-F1-model_v4 Exodeoxyribonuclease III 0.9961 1 69 GO:0003677
GO:0004519
GO:0006281
GO:0008311
AF-A0A656Z470-F1-model_v4 Exodeoxyribonuclease III 0.9883 1 180 GO:0006281
GO:0008311
GO:0046872
AF-A0A7C9VEU4-F1-model_v4 Exodeoxyribonuclease III 0.9858 1 171 GO:0003677
GO:0004519
GO:0006281
GO:0008311
GO:0046872
AF-A0A2V8GL27-F1-model_v4 Exodeoxyribonuclease III 0.9856 1 70 GO:0003677
GO:0004519
GO:0006281
GO:0008311
AF-A0A840MWS9-F1-model_v4 Exodeoxyribonuclease-3 (EC 3.1.11.2) 0.9843 1 260 GO:0003677
GO:0004519
GO:0006281
GO:0008311
GO:0046872

Map