F373732

General Info

Members Datasets Scaffolds Average Seq Length
265 225 163 324

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|8055431914|8055434411
Length 391
Sequence GVSTRRWRGLYALDRKMSTAPLELHVCVIILASMQRRAPLTREPDFRDVVAAIPNPSGRESRIMEFLWVDFLGKPVWMWLFFLAVVAFLLILDLGLLHKNSKEIGMGESFAFSAFYITLGVAFGGWIWWLSGSQAALEYMTGFVIEKSLAMDNIFVIAMIFSYFAIPRAYQHRVLLFGILGVIILRGIMIAGGAAIVESYHWVLYIFAAFLVFTGIKMLLSADKEYDVSTNPVLKFVRRHLPVTEKLEGDHFVVRKADETTGRVKTYITPLLLALIMVEFVDLVFAVDSIPAIFAITTDPYLVYTSNIFAILGLRALYFALSALIHRFAYLKYALAVVLVFIGSKIFIADMLGLTKIPPLLSLGITLGILAAGILGSLWATKDRGNKIEAK

Samples

Sample ID Description Type Environment
1 2509276019 Ensifer aridi TW10 Isolate Nodule
2 2509276033 Rhizobium leguminosarum bv. trifolii WSM2012 Isolate Nodule
3 2510065019 Rhizobium leguminosarum bv. trifolii WSM1689 Isolate Nodule
4 2510461069 Rhizobium sp. PDO1-076 Isolate Rhizosphere
5 2511231027 Phyllobacterium sp. YR531 Isolate Rhizosphere
6 2513237093 Rhizobium leguminosarum bv. phaseoli FA23 Isolate Nodule
7 2513237103 Rhizobium leguminosarum bv. viciae VF39 Isolate Nodule
8 2513237146 Rhizobium mongolense USDA 1844 (Illumina) Isolate Nodule
9 2516653077 Rhizobium acaciae WSM1481 Isolate Nodule
10 2517093000 Rhizobium leguminosarum bv. trifolii SRDI943 Isolate Nodule
11 2523231067 Pleomorphomonas oryzae DSM 16300 Isolate Unclassified
12 2547132103 Chromobacterium sp. C-61 Isolate Rhizosphere
13 2558860100 Sinorhizobium sp. PC2 Isolate Nodule
14 2558860983 Allorhizobium undicola ATCC 700741 Isolate Rhizoplane
15 2585427528 Rhizobium leguminosarum CF307 Isolate Rhizosphere
16 2585427593 Rhizobium tropici CF286 Isolate Rhizosphere
17 2599185156 Rhizobium sp. NFR03 Isolate Rhizoplane
18 2599185170 Rhizobium mongolense USDA 1844 (PacBio) Isolate Nodule
19 2599185236 Rhizobium sp. NFR07 Isolate Rhizoplane
20 2599185352 Sinorhizobium sp. NFACC03 Isolate Rhizoplane
21 2600254933 Rhizobium sp. NFR12 Isolate Rhizoplane
22 2615840698 Rhizobium multihospitium HAMBI 2975 Isolate Nodule
23 2643221557 Ensifer sp. Root558 Isolate Unclassified
24 2643221558 Rhizobium sp. Root149 Isolate Unclassified
25 2643221610 Ensifer sp. Root74 Isolate Unclassified
26 2643221618 Ensifer sp. Root231 Isolate Unclassified
27 2643221653 Rhizobium sp. Root1240 Isolate Unclassified
28 2643221655 Ensifer sp. Root1252 Isolate Unclassified
29 2643221659 Ensifer sp. Root127 Isolate Unclassified
30 2643221668 Ensifer sp. Root423 Isolate Unclassified
31 2643221675 Ensifer sp. Root1298 Isolate Unclassified
32 2643221680 Ensifer sp. Root1312 Isolate Unclassified
33 2643221699 Brevundimonas sp. Root1423 Isolate Unclassified
34 2643221712 Ensifer sp. Root258 Isolate Unclassified
35 2643221719 Rhizobium sp. Root274 Isolate Unclassified
36 2643221723 Ensifer sp. Root278 Isolate Unclassified
37 2643221726 Ensifer sp. Root954 Isolate Unclassified
38 2667528174 Rhizobium sp. NFR17 Isolate Rhizoplane
39 2713897090 Paracoccus sphaerophysae HAMBI 3106 Isolate Nodule
40 2724679232 Rhizobium leguminosarum Vaf12 Isolate Unclassified
41 2738541317 Rhizobium halophytocola DSM 21600 Isolate Unclassified
42 2738541333 Rhizobium sophoriradicis CCBAU 03470 Isolate Unclassified
43 2738543031 Pleomorphomonas sp. CF100 Isolate Unclassified
44 2767802442 Phyllobacterium brassicacearum 29-15 Isolate Rhizoplane
45 2775506902 Phyllobacterium zundukense Tri-48 Isolate Unclassified
46 2775506904 Phyllobacterium zundukense Tri-38 Isolate Unclassified
47 2791355253 Rhizobium rhizosphaerae RD15 Isolate Rhizosphere
48 2791355259 Rhizobium hidalgonense FH14 Isolate Nodule
49 2791355261 Rhizobium sp. J15 Isolate Nodule
50 2802429633 Rhizobium anhuiense J3 Isolate Nodule
51 2802429634 Rhizobium anhuiense S10 Isolate Nodule
52 2802429635 Rhizobium anhuiense Y27 Isolate Nodule
53 2802429636 Rhizobium anhuiense JX3 Isolate Nodule
54 2802429637 Rhizobium anhuiense C15 Isolate Nodule
55 2818991272 Rhizobium sp. SLBN-4 Isolate Unclassified
56 2838029111 Rhizobium tropici SEMIA 4079 Isolate Nodule
57 2838035591 Rhizobium mongolense SEMIA 4087 Isolate Nodule
58 2838042994 Rhizobium esperanzae SEMIA 4089 Isolate Nodule
59 2838661181 Rhizobium mongolense SEMIA 402 Isolate Nodule
60 2840764183 Phyllobacterium sophorae CCBAU 03422 Isolate Unclassified
61 2842217011 Rhizobium leguminosarum SEMIA 475 Isolate Nodule
62 2842395702 Rhizobium ecuadorense SEMIA 4029 Isolate Nodule
63 2842475841 Rhizobium tropici SEMIA 4059 Isolate Nodule
64 2842502639 Rhizobium tropici SEMIA 4063 Isolate Nodule
65 2842871566 Phyllobacterium sp. R-73111 Isolate Unclassified
66 2842922631 Pararhizobium sp. R-72066 Isolate Unclassified
67 2843690924 Chromobacterium rhizoryzae JP2-74 Isolate Rhizosphere
68 2844163670 Ensifer sp. 1H6 Isolate Unclassified
69 2850079185 Ensifer aridi JNVU TP6 Isolate Unclassified
70 2855020534 Paracoccus endophyticus SYSUP0003 Isolate Stem Tuber
71 2882456835 Microvirga sp. KLBC 81 Isolate Unclassified
72 2894652903 Phyllobacterium sp. SYP-B3895 Isolate Rhizosphere
73 2895880812 Frankia sp. BMG5.11 Isolate Unclassified
74 2898795034 Rhodobacter sp. SGA-6-6 Isolate Rhizosphere
75 2899803654 Agrobacterium sp. a22-2 Isolate Unclassified
76 2913308742 Rhizobium halophytocola DSM 21600 Isolate Unclassified
77 2917554339 Chthonobacter rhizosphaerae yh7-1 Isolate Rhizosphere
78 2919408235 Rhizobium miluonense 3199 Isolate Unclassified
79 2928521798 Phyllobacterium ifriqiyense 1451 Isolate Rhizosphere
80 2933016740 Rhizobium sp. SEMIA 4085 Isolate Nodule
81 2941485952 Brevundimonas faecalis 2814 Isolate Rhizosphere
82 2941499720 Ensifer sp. 4252 Isolate Rhizosphere
83 2954011201 Phyllobacterium ifrigiyense W4I11 Isolate Rhizosphere
84 2989771324 Rhizobium rhizolycopersici DBTS2 Isolate Rhizosphere
85 2989776772 Rhizobium glycinendophyticum CL12 Isolate Unclassified
86 2996893221 Rhizobium sp. R635 Isolate Nodule
87 3000405567 Rhodobacteraceae bacterium LNNU 3342 Isolate Rhizosphere
88 3002141150 Phyllobacterium sp. 628 Isolate Unclassified
89 3003930520 Sinorhizobium sp. BG8 Isolate Unclassified
90 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
91 3300002739 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA Metagenome Endosphere
92 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
93 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
94 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
95 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
96 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
97 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
98 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
99 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
100 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
101 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
102 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
103 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
104 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
105 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
106 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
107 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
108 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
109 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
110 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
111 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
112 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
113 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
114 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
115 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
116 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
117 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
118 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
119 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
120 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
121 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
122 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
123 3300009765 Root nodule microbial communities of legume samples collected from Mexico - Turtle bean Mexico pink nodule Metagenome Nodule
124 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
125 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
126 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
127 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
128 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
129 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
130 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
131 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
132 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
133 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
134 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
135 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
136 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
137 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
138 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
139 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
140 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
141 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
142 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
143 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
144 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
145 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
146 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
147 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
148 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
149 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
150 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
151 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
152 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
153 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
154 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
155 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
156 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
157 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
158 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
159 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
160 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
161 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
162 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
163 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
164 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
165 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
166 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
167 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
168 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
169 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
170 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
171 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
172 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
173 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
174 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
175 3300041501 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_7 MetaG Metagenome Unclassified
176 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
177 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
178 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
179 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
180 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
181 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
182 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
183 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
184 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
185 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
186 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
187 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
188 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
189 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
190 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
191 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
192 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
193 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
194 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
195 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
196 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
197 3300049704 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control Metagenome Rhizosphere
198 3300049764 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J12_A_4_control Metagenome Rhizosphere
199 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
200 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
201 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
202 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
203 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
204 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
205 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
206 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
207 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
208 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
209 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
210 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
211 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
212 3300059510 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 55R_CD_T2_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
213 3300059511 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 56R_CD_T2_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
214 639633055 Rhizobium leguminosarum bv. viciae 3841 Isolate Unclassified
215 8005246636 Rhizobium wuzhouense W44 Isolate Rhizosphere
216 8005382845 Rhizobium sp. R634 Isolate Nodule
217 8005395548 Rhizobium sp. R339 Isolate Nodule
218 8005658619 Rhizobium terrae CC-HIH110 Isolate Unclassified
219 8005682033 Rhizobium dioscoreae S-93 Isolate Unclassified
220 8005695170 Rhizobium sp. RMa-01 Isolate Unclassified
221 8018150411 Rhizobium straminoryzae SM12 Isolate Rhizosphere
222 8018176218 Rhizobium sp. N122 Isolate Nodule
223 8054563764 Acuticoccus kalidii M5D2P5 Isolate Unclassified
224 8055431914 Allorhizobium sonneratiae BGMRC 0089 Isolate Unclassified
225 8056875544 Rhizobium halophilum TRM95001 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 60.75
Metatranscriptomes 0.75
Isolates 38.49

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 30.19
Nodule 12.45
Rhizoplane 3.77
Rhizosphere 32.08
Stem 0
Stem Tuber 0.38
Unclassified 21.13

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25162J39368_1000621 3300002737 Bacteria 25394
2 JGI25158J39367_1001869 3300002739 Bacteria 3570
3 JGI25152J39213_1013893 3300002773 Bacteria 1656
4 JGI25159J45721_1000052 3300002987 Bacteria 57175
5 JGI25151J46595_10000389 3300003187 Bacteria 45619
6 JGI25151J46595_10006215 3300003187 Bacteria 6041
7 JGI25165J46597_1000018 3300003214 Bacteria 374701
8 JGI25153J46596_10000069 3300003215 Bacteria 117156
9 JGI25160J50197_1000007 3300003354 Bacteria 316012
10 JGI25160J50197_1001179 3300003354 Bacteria 13324
11 JGI25161J50226_1000991 3300003374 Bacteria 9991
12 JGI25161J50226_1009983 3300003374 Bacteria 1305
13 Ga0055526_1001100 3300003771 Bacteria 19639
14 Ga0055526_1003020 3300003771 Bacteria 10979
15 Ga0055524_1000377 3300003775 Bacteria 38923
16 Ga0055524_1001201 3300003775 Bacteria 15363
17 Ga0055536_1006896 3300003781 Bacteria 5183
18 Ga0055528_1004271 3300003790 Bacteria 6913
19 Ga0055530_10012371 3300003791 Bacteria 2982
20 Ga0055531_10007159 3300003794 Bacteria 6147
21 Ga0055543_1000120 3300004625 Bacteria 66419
22 Ga0055543_1002630 3300004625 Bacteria 5787
23 Ga0065165_1000011 3300005262 Bacteria 316465
24 Ga0070670_100216107 3300005331 Bacteria 1668
25 Ga0068859_100090870 3300005617 Bacteria 3104
26 Ga0068863_100012270 3300005841 Bacteria 8274
27 Ga0068858_100090695 3300005842 Bacteria 2844
28 Ga0068862_100057132 3300005844 Unclassified 3345
29 Ga0075365_10002590 3300006038 Bacteria 8945
30 Ga0075368_10000033 3300006042 Bacteria 32184
31 Ga0075368_10000208 3300006042 Bacteria 16221
32 Ga0075363_100001093 3300006048 Bacteria 9825
33 Ga0075364_10005453 3300006051 Bacteria 7393
34 Ga0075367_10000170 3300006178 Bacteria 20862
35 Ga0075367_10000481 3300006178 Bacteria 14919
36 Ga0075367_10054329 3300006178 Bacteria 2375
37 Ga0075369_10022306 3300006186 Bacteria 2610
38 Ga0075366_10010678 3300006195 Bacteria 5161
39 Ga0075370_10006381 3300006353 Bacteria 5925
40 Ga0075370_10080377 3300006353 Bacteria 1873
41 Ga0097620_100090870 3300006931 Bacteria 3104
42 Ga0105247_10053496 3300009101 Bacteria 2491
43 Ga0105248_10678393 3300009177 Bacteria 1163
44 Ga0123341_1000006 3300009765 Bacteria 149197
45 Ga0105239_10243601 3300010375 Bacteria 2018
46 Ga0157371_10004053 3300013102 Bacteria 12959
47 Ga0209436_101574 3300025208 Bacteria 7704
48 Ga0209147_100462 3300025229 Bacteria 25117
49 Ga0209437_100022 3300025233 Bacteria 625694
50 Ga0207425_1004117 3300025245 Bacteria 4446
51 Ga0209148_1013854 3300025254 Bacteria 1439
52 Ga0209129_1000664 3300025258 Bacteria 22823
53 Ga0209233_1000031 3300025261 Bacteria 624646
54 Ga0209130_1000033 3300025284 Bacteria 316064
55 Ga0209676_1000605 3300025292 Bacteria 52680
56 Ga0209025_1000032 3300025294 Bacteria 416141
57 Ga0209025_1000720 3300025294 Bacteria 56281
58 Ga0209025_1001218 3300025294 Bacteria 35912
59 Ga0209025_1039891 3300025294 Bacteria 2041
60 Ga0209564_1000079 3300025295 Bacteria 266525
61 Ga0209564_1000968 3300025295 Bacteria 36302
62 Ga0209564_1039976 3300025295 Bacteria 1281
63 Ga0209758_1000005 3300025297 Bacteria 1368918
64 Ga0209758_1000376 3300025297 Bacteria 77855
65 Ga0209050_1001253 3300025298 Bacteria 29284
66 Ga0209050_1001615 3300025298 Bacteria 23174
67 Ga0209256_1000073 3300025299 Bacteria 237553
68 Ga0209256_1000950 3300025299 Bacteria 35138
69 Ga0209256_1002312 3300025299 Bacteria 15975
70 Ga0207426_1000078 3300025302 Bacteria 316064
71 Ga0207426_1000146 3300025302 Bacteria 190683
72 Ga0209257_1000303 3300025304 Bacteria 107862
73 Ga0209257_1006061 3300025304 Bacteria 8047
74 Ga0207650_10134627 3300025925 Bacteria 1937
75 Ga0207703_10196624 3300026035 Bacteria 1789
76 Ga0207702_10008923 3300026078 Bacteria 8453
77 Ga0207641_10374824 3300026088 Bacteria 1361
78 Ga0209371_1000058 3300027312 Bacteria 237920
79 Ga0209813_10000041 3300027866 Bacteria 53753
80 Ga0209813_10000049 3300027866 Bacteria 48800
81 Ga0209974_10049478 3300027876 Bacteria 1410
82 Ga0268265_10005008 3300028380 Bacteria 9092
83 Ga0268265_10045585 3300028380 Unclassified 3273
84 Ga0265337_1002136 3300028556 Bacteria 9317
85 Ga0265319_1006480 3300028563 Bacteria 5416
86 Ga0265334_10000592 3300028573 Bacteria 18342
87 Ga0265318_10005457 3300028577 Bacteria 5969
88 Ga0265323_10003999 3300028653 Bacteria 6391
89 Ga0265322_10022623 3300028654 Bacteria 1798
90 Ga0265336_10000337 3300028666 Bacteria 31135
91 Ga0307515_10002406 3300028794 Bacteria 40814
92 Ga0265338_10000065 3300028800 Bacteria 188966
93 Ga0265324_10012162 3300029957 Bacteria 3255
94 Ga0307513_10002516 3300031456 Bacteria 25320
95 Ga0307405_10054792 3300031731 Bacteria 2491
96 Ga0307413_10001158 3300031824 Bacteria 9682
97 Ga0307410_10007896 3300031852 Bacteria 5862
98 Ga0307410_10013869 3300031852 Bacteria 4719
99 Ga0307410_10075459 3300031852 Bacteria 2350
100 Ga0307406_10053301 3300031901 Bacteria 2576
101 Ga0307406_10183766 3300031901 Bacteria 1524
102 Ga0307407_10001373 3300031903 Bacteria 8772
103 Ga0307407_10019168 3300031903 Bacteria 3478
104 Ga0307409_100014135 3300031995 Bacteria 5175
105 Ga0307409_100022311 3300031995 Bacteria 4362
106 Ga0307409_100033436 3300031995 Bacteria 3742
107 Ga0307416_100161602 3300032002 Bacteria 2071
108 Ga0307414_10009080 3300032004 Bacteria 5691
109 Ga0307414_10035107 3300032004 Bacteria 3333
110 Ga0307411_10002479 3300032005 Bacteria 8186
111 Ga0307411_10002715 3300032005 Bacteria 7937
112 Ga0373927_0001173 3300035695 Bacteria 19846
113 Ga0373925_0039514 3300037068 Bacteria 3490
114 Ga0395905_0000913 3300037471 Bacteria 38168
115 Ga0451833_0310218 3300041491 Bacteria 1064
116 Ga0451841_0246947 3300041498 Bacteria 1667
117 Ga0451845_0974321 3300041501 Bacteria 2000
118 Ga0451853_2201751 3300041512 Bacteria 2604
119 Ga0439445_0040462 3300042004 Bacteria 1237
120 Ga0466965_0003789 3300044683 Bacteria 6668
121 Ga0466966_0022311 3300044684 Bacteria 4155
122 Ga0466961_0000706 3300044693 Bacteria 20985
123 Ga0466960_0122593 3300044901 Bacteria 1363
124 Ga0466959_0003753 3300045049 Bacteria 10056
125 Ga0451576_0157644 3300045051 Bacteria 2368
126 Ga0495645_0022156 3300046543 Bacteria 4595
127 Ga0496110_0126947 3300048913 Bacteria 2302
128 Ga0496111_0006521 3300048914 Bacteria 7586
129 Ga0496114_0369333 3300048917 Bacteria 1270
130 Ga0496117_0031342 3300048920 Bacteria 4062
131 Ga0496122_0041974 3300048925 Bacteria 3606
132 Ga0496124_0018307 3300048927 Bacteria 6564
133 Ga0496124_0022096 3300048927 Bacteria 5842
134 Ga0496124_0037349 3300048927 Bacteria 4225
135 Ga0496124_0078598 3300048927 Bacteria 2718
136 Ga0496125_0000297 3300048928 Bacteria 97897
137 Ga0501031_0150560 3300049568 Bacteria 1520
138 Ga0501033_0000050 3300049570 Bacteria 111819
139 Ga0501034_0000464 3300049571 Bacteria 67252
140 Ga0501034_0138288 3300049571 Bacteria 2416
141 Ga0501037_0115593 3300049573 Bacteria 1931
142 Ga0501073_0115844 3300049589 Bacteria 1857
143 Ga0501221_025490 3300049704 Bacteria 1195
144 Ga0501267_002298 3300049764 Bacteria 1703
145 Ga0501035_0001982 3300049822 Bacteria 20487
146 nmdc:mga03683_50570_c1 3300050489 Bacteria 1733
147 nmdc:mga03n38_23431_c1 3300050490 Bacteria 2511
148 nmdc:mga0yw44_26186_c2 3300050492 Bacteria 3006
149 nmdc:mga0k408_9130_c2 3300050493 Bacteria 4822
150 nmdc:mga06z11_30057_c1 3300050494 Bacteria 2311
151 nmdc:mga06z11_97_c1 3300050494 Bacteria 37468
152 nmdc:mga06z11_9_c1 3300050494 Bacteria 109982
153 nmdc:mga04h51_12_c1 3300050495 Bacteria 83117
154 nmdc:mga04h51_34_c1 3300050495 Bacteria 46979
155 nmdc:mga07m45_90661_c1 3300050496 Bacteria 1751
156 nmdc:mga07m45_98685_c1 3300050496 Bacteria 1677
157 nmdc:mga0sz30_25511_c1 3300050516 Bacteria 2417
158 Ga0500642_0000688 3300053130 Bacteria 9984
159 Ga0500568_0003314 3300053139 Bacteria 9067
160 Ga0500588_0032065 3300053146 Bacteria 1521
161 Ga0500604_0001816 3300053151 Bacteria 5958
162 Ga0587090_005651 3300059510 Bacteria 1577
163 Ga0587091_009241 3300059511 Bacteria 1480

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300046543 Ga0495645_0022156 Ga0495645_0022156_109_1104 288
2 3300006042 Ga0075368_10000208 Ga0075368_1000020810 298
3 3300006178 Ga0075367_10000170 Ga0075367_1000017022 298
4 3300006353 Ga0075370_10080377 Ga0075370_100803772 298
5 3300025229 Ga0209147_100462 Ga0209147_10046228 298
6 3300027866 Ga0209813_10000049 Ga0209813_1000004944 298
7 3300050494 nmdc:mga06z11_97_c1 nmdc:mga06z11_97_c1_24284_25264 298
8 3300050495 nmdc:mga04h51_34_c1 nmdc:mga04h51_34_c1_33795_34775 298
9 3300050496 nmdc:mga07m45_98685_c1 nmdc:mga07m45_98685_c1_101_1081 298
10 3300006048 Ga0075363_100001093 Ga0075363_10000109312 299
11 3300050490 nmdc:mga03n38_23431_c1 nmdc:mga03n38_23431_c1_1374_2354 299
12 3300044684 Ga0466966_0022311 Ga0466966_0022311_891_1892 303
13 3300044693 Ga0466961_0000706 Ga0466961_0000706_12105_13106 303
14 3300044683 Ga0466965_0003789 Ga0466965_0003789_4930_5943 304
15 3300045049 Ga0466959_0003753 Ga0466959_0003753_6074_7087 304
16 3300031901 Ga0307406_10053301 Ga0307406_100533012 308
17 3300032002 Ga0307416_100161602 Ga0307416_1001616022 308
18 3300005844 Ga0068862_100057132 Ga0068862_1000571322 310
19 3300028380 Ga0268265_10045585 Ga0268265_100455852 310
20 3300049704 Ga0501221_025490 Ga0501221_025490_131_1108 310
21 3300035695 Ga0373927_0001173 Ga0373927_0001173_7620_8564 311
22 3300037068 Ga0373925_0039514 Ga0373925_0039514_2281_3225 311
23 3300044901 Ga0466960_0122593 Ga0466960_0122593_51_1001 311
24 3300025294 Ga0209025_1039891 Ga0209025_10398912 313
25 3300031852 Ga0307410_10075459 Ga0307410_100754592 313
26 3300031995 Ga0307409_100033436 Ga0307409_1000334364 313
27 3300032005 Ga0307411_10002479 Ga0307411_100024793 313
28 3300049764 Ga0501267_002298 Ga0501267_002298_336_1334 313
29 3300005331 Ga0070670_100216107 Ga0070670_1002161073 314
30 3300025925 Ga0207650_10134627 Ga0207650_101346273 314
31 3300031824 Ga0307413_10001158 Ga0307413_100011587 314
32 3300031852 Ga0307410_10007896 Ga0307410_100078962 314
33 3300031852 Ga0307410_10013869 Ga0307410_100138693 314
34 3300031903 Ga0307407_10001373 Ga0307407_100013737 314
35 3300031903 Ga0307407_10019168 Ga0307407_100191684 314
36 3300031995 Ga0307409_100014135 Ga0307409_1000141352 314
37 3300031995 Ga0307409_100022311 Ga0307409_1000223113 314
38 3300032004 Ga0307414_10009080 Ga0307414_100090804 314
39 3300032004 Ga0307414_10035107 Ga0307414_100351077 314
40 3300032005 Ga0307411_10002715 Ga0307411_100027157 314
41 3300053130 Ga0500642_0000688 Ga0500642_0000688_7480_8499 314
42 3300053146 Ga0500588_0032065 Ga0500588_0032065_325_1344 314
43 3300049570 Ga0501033_0000050 Ga0501033_0000050_181_1188 315
44 3300049822 Ga0501035_0001982 Ga0501035_0001982_4804_5811 315
45 iso_pu_bacteria 2738541317 2738945709 315
46 iso_pu_bacteria 2913308742 2913310609 315
47 iso_pu_bacteria 8055431914 8055433367 315
48 3300005617 Ga0068859_100090870 Ga0068859_1000908703 316
49 3300005842 Ga0068858_100090695 Ga0068858_1000906952 316
50 3300006931 Ga0097620_100090870 Ga0097620_1000908703 316
51 3300009101 Ga0105247_10053496 Ga0105247_100534962 316
52 3300026035 Ga0207703_10196624 Ga0207703_101966241 316
53 iso_pu_bacteria 2547132103 2547374541 316
54 iso_pu_bacteria 2643221723 2644677408 316
55 iso_pu_bacteria 2843690924 2843692061 316
56 iso_pu_bacteria 2855020534 2855022952 316
57 3300045051 Ga0451576_0157644 Ga0451576_0157644_1109_2122 317
58 iso_pu_bacteria 2941485952 2941487360 317
59 3300010375 Ga0105239_10243601 Ga0105239_102436012 318
60 iso_pu_bacteria 2599185352 2600192551 318
61 iso_pu_bacteria 2643221557 2643805228 318
62 iso_pu_bacteria 2643221610 2644064072 318
63 iso_pu_bacteria 2643221668 2644375678 318
64 iso_pu_bacteria 2643221675 2644415904 318
65 iso_pu_bacteria 2643221680 2644448945 318
66 iso_pu_bacteria 2643221726 2644686531 318
67 iso_pu_bacteria 2713897090 2715500822 318
68 iso_pu_bacteria 2791355261 2793329389 318
69 3300049568 Ga0501031_0150560 Ga0501031_0150560_352_1320 319
70 3300049573 Ga0501037_0115593 Ga0501037_0115593_929_1897 319
71 3300053139 Ga0500568_0003314 Ga0500568_0003314_4042_5049 319
72 iso_pu_bacteria 2599185236 2599721369 319
73 iso_pu_bacteria 8056875544 8056876499 319
74 3300005841 Ga0068863_100012270 Ga0068863_1000122707 320
75 3300026088 Ga0207641_10374824 Ga0207641_103748242 320
76 iso_pu_bacteria 2643221653 2644298477 320
77 iso_pu_bacteria 2643221719 2644656706 320
78 iso_pu_bacteria 2989776772 2989779005 320
79 iso_pu_bacteria 8005246636 8005248558 320
80 3300009177 Ga0105248_10678393 Ga0105248_106783931 321
81 3300028556 Ga0265337_1002136 Ga0265337_10021362 321
82 3300028563 Ga0265319_1006480 Ga0265319_10064805 321
83 3300028573 Ga0265334_10000592 Ga0265334_1000059210 321
84 3300028577 Ga0265318_10005457 Ga0265318_100054571 321
85 3300028653 Ga0265323_10003999 Ga0265323_100039992 321
86 3300028654 Ga0265322_10022623 Ga0265322_100226232 321
87 3300028666 Ga0265336_10000337 Ga0265336_1000033720 321
88 3300028800 Ga0265338_10000065 Ga0265338_1000006558 321
89 3300029957 Ga0265324_10012162 Ga0265324_100121623 321
90 3300048927 Ga0496124_0037349 Ga0496124_0037349_1261_2241 321
91 3300048928 Ga0496125_0000297 Ga0496125_0000297_92918_93898 321
92 iso_pu_bacteria 2558860983 2561466351 321
93 iso_pu_bacteria 2643221558 2643812101 321
94 iso_pu_bacteria 2643221699 2644549162 321
95 iso_pu_bacteria 2818991272 2819241661 321
96 iso_pu_bacteria 2895880812 2895881382 321
97 iso_pu_bacteria 2898795034 2898795595 321
98 iso_pu_bacteria 2899803654 2899807639 321
99 iso_pu_bacteria 2917554339 2917556274 321
100 iso_pu_bacteria 2989771324 2989773566 321
101 iso_pu_bacteria 3003930520 3003933646 321
102 iso_pu_bacteria 8005658619 8005659670 321
103 iso_pu_bacteria 8018150411 8018155695 321
104 3300002739 JGI25158J39367_1001869 JGI25158J39367_10018691 322
105 3300002773 JGI25152J39213_1013893 JGI25152J39213_10138932 322
106 3300002987 JGI25159J45721_1000052 JGI25159J45721_100005235 322
107 3300003354 JGI25160J50197_1000007 JGI25160J50197_1000007272 322
108 3300003374 JGI25161J50226_1000991 JGI25161J50226_10009914 322
109 3300003771 Ga0055526_1001100 Ga0055526_100110014 322
110 3300003775 Ga0055524_1000377 Ga0055524_100037735 322
111 3300003781 Ga0055536_1006896 Ga0055536_10068964 322
112 3300003791 Ga0055530_10012371 Ga0055530_100123713 322
113 3300004625 Ga0055543_1000120 Ga0055543_100012022 322
114 3300005262 Ga0065165_1000011 Ga0065165_100001122 322
115 3300025208 Ga0209436_101574 Ga0209436_1015741 322
116 3300025284 Ga0209130_1000033 Ga0209130_100003322 322
117 3300025292 Ga0209676_1000605 Ga0209676_100060549 322
118 3300025294 Ga0209025_1000032 Ga0209025_1000032266 322
119 3300025295 Ga0209564_1000079 Ga0209564_1000079228 322
120 3300025295 Ga0209564_1039976 Ga0209564_10399762 322
121 3300025298 Ga0209050_1001253 Ga0209050_100125326 322
122 3300025299 Ga0209256_1000073 Ga0209256_1000073135 322
123 3300025299 Ga0209256_1000950 Ga0209256_100095014 322
124 3300025302 Ga0207426_1000078 Ga0207426_100007822 322
125 3300025304 Ga0209257_1006061 Ga0209257_10060615 322
126 3300041498 Ga0451841_0246947 Ga0451841_0246947_559_1527 322
127 3300048913 Ga0496110_0126947 Ga0496110_0126947_1159_2136 322
128 3300048914 Ga0496111_0006521 Ga0496111_0006521_3951_4928 322
129 3300048917 Ga0496114_0369333 Ga0496114_0369333_199_1197 322
130 3300048927 Ga0496124_0022096 Ga0496124_0022096_3516_4493 322
131 3300050489 nmdc:mga03683_50570_c1 nmdc:mga03683_50570_c1_46_1014 322
132 iso_pu_bacteria 2510065019 2510132132 322
133 iso_pu_bacteria 2510461069 2510841644 322
134 iso_pu_bacteria 2838661181 2838662290 322
135 iso_pu_bacteria 2882456835 2882457216 322
136 3300003215 JGI25153J46596_10000069 JGI25153J46596_1000006949 323
137 3300003794 Ga0055531_10007159 Ga0055531_100071594 323
138 3300006042 Ga0075368_10000033 Ga0075368_1000003314 323
139 3300006051 Ga0075364_10005453 Ga0075364_1000545310 323
140 3300006178 Ga0075367_10000481 Ga0075367_1000048111 323
141 3300025297 Ga0209758_1000005 Ga0209758_1000005140 323
142 3300025298 Ga0209050_1001615 Ga0209050_10016153 323
143 3300025304 Ga0209257_1000303 Ga0209257_100030361 323
144 3300027866 Ga0209813_10000041 Ga0209813_1000004125 323
145 3300028380 Ga0268265_10005008 Ga0268265_100050083 323
146 3300031731 Ga0307405_10054792 Ga0307405_100547923 323
147 3300031901 Ga0307406_10183766 Ga0307406_101837661 323
148 3300048927 Ga0496124_0078598 Ga0496124_0078598_1373_2398 323
149 3300049571 Ga0501034_0138288 Ga0501034_0138288_1243_2220 323
150 3300049589 Ga0501073_0115844 Ga0501073_0115844_422_1438 323
151 3300050494 nmdc:mga06z11_9_c1 nmdc:mga06z11_9_c1_30594_31574 323
152 3300050495 nmdc:mga04h51_12_c1 nmdc:mga04h51_12_c1_78409_79389 323
153 3300053151 Ga0500604_0001816 Ga0500604_0001816_4546_5562 323
154 iso_pu_bacteria 2509276019 2509374963 323
155 iso_pu_bacteria 2509276033 2509443491 323
156 iso_pu_bacteria 2511231027 2511389539 323
157 iso_pu_bacteria 2513237093 2513635742 323
158 iso_pu_bacteria 2513237103 2513709376 323
159 iso_pu_bacteria 2513237146 2513925001 323
160 iso_pu_bacteria 2516653077 2517039759 323
161 iso_pu_bacteria 2517093000 2517093882 323
162 iso_pu_bacteria 2523231067 2523467568 323
163 iso_pu_bacteria 2558860100 2558864833 323
164 iso_pu_bacteria 2585427528 2585542603 323
165 iso_pu_bacteria 2585427593 2585838209 323
166 iso_pu_bacteria 2599185156 2599336099 323
167 iso_pu_bacteria 2599185170 2599416568 323
168 iso_pu_bacteria 2600254933 2600373118 323
169 iso_pu_bacteria 2615840698 2616552674 323
170 iso_pu_bacteria 2643221618 2644104239 323
171 iso_pu_bacteria 2643221655 2644310269 323
172 iso_pu_bacteria 2643221659 2644333475 323
173 iso_pu_bacteria 2643221712 2644616814 323
174 iso_pu_bacteria 2724679232 2725952348 323
175 iso_pu_bacteria 2738541333 2739035097 323
176 iso_pu_bacteria 2738543031 2739351880 323
177 iso_pu_bacteria 2767802442 2770198582 323
178 iso_pu_bacteria 2775506902 2776270101 323
179 iso_pu_bacteria 2775506904 2776281236 323
180 iso_pu_bacteria 2791355253 2793282800 323
181 iso_pu_bacteria 2791355259 2793316962 323
182 iso_pu_bacteria 2802429633 2806044385 323
183 iso_pu_bacteria 2802429634 2806051817 323
184 iso_pu_bacteria 2802429635 2806058120 323
185 iso_pu_bacteria 2802429636 2806069001 323
186 iso_pu_bacteria 2802429637 2806075786 323
187 iso_pu_bacteria 2838029111 2838031549 323
188 iso_pu_bacteria 2838035591 2838036680 323
189 iso_pu_bacteria 2838042994 2838047088 323
190 iso_pu_bacteria 2840764183 2840765530 323
191 iso_pu_bacteria 2842217011 2842220757 323
192 iso_pu_bacteria 2842395702 2842400893 323
193 iso_pu_bacteria 2842475841 2842478281 323
194 iso_pu_bacteria 2842502639 2842505773 323
195 iso_pu_bacteria 2842871566 2842872645 323
196 iso_pu_bacteria 2842922631 2842927489 323
197 iso_pu_bacteria 2844163670 2844165011 323
198 iso_pu_bacteria 2850079185 2850083866 323
199 iso_pu_bacteria 2894652903 2894654185 323
200 iso_pu_bacteria 2928521798 2928524855 323
201 iso_pu_bacteria 2933016740 2933020168 323
202 iso_pu_bacteria 2941499720 2941503934 323
203 iso_pu_bacteria 2954011201 2954011523 323
204 iso_pu_bacteria 2996893221 2996895358 323
205 iso_pu_bacteria 3000405567 3000406282 323
206 iso_pu_bacteria 3002141150 3002141205 323
207 iso_pu_bacteria 639633055 639647273 323
208 iso_pu_bacteria 8005382845 8005386151 323
209 iso_pu_bacteria 8005395548 8005397452 323
210 iso_pu_bacteria 8005682033 8005683891 323
211 iso_pu_bacteria 8005695170 8005698952 323
212 iso_pu_bacteria 8018176218 8018178073 323
213 iso_pu_bacteria 8054563764 8054565733 323
214 3300003187 JGI25151J46595_10006215 JGI25151J46595_100062153 324
215 3300027312 Ga0209371_1000058 Ga0209371_1000058195 324
216 3300027876 Ga0209974_10049478 Ga0209974_100494782 324
217 3300037471 Ga0395905_0000913 Ga0395905_0000913_16790_17770 324
218 3300059510 Ga0587090_005651 Ga0587090_005651_118_1101 324
219 3300059511 Ga0587091_009241 Ga0587091_009241_126_1109 324
220 3300013102 Ga0157371_10004053 Ga0157371_100040535 325
221 3300028794 Ga0307515_10002406 Ga0307515_1000240617 325
222 3300048925 Ga0496122_0041974 Ga0496122_0041974_716_1693 325
223 3300049571 Ga0501034_0000464 Ga0501034_0000464_35744_36739 325
224 iso_pu_bacteria 2667528174 2671113030 325
225 iso_pu_bacteria 2919408235 2919412819 325
226 3300003187 JGI25151J46595_10000389 JGI25151J46595_1000038934 327
227 3300003354 JGI25160J50197_1001179 JGI25160J50197_100117911 327
228 3300003374 JGI25161J50226_1009983 JGI25161J50226_10099831 327
229 3300003771 Ga0055526_1003020 Ga0055526_10030203 327
230 3300003775 Ga0055524_1001201 Ga0055524_10012016 327
231 3300003790 Ga0055528_1004271 Ga0055528_10042718 327
232 3300004625 Ga0055543_1002630 Ga0055543_10026305 327
233 3300006038 Ga0075365_10002590 Ga0075365_100025905 327
234 3300006178 Ga0075367_10054329 Ga0075367_100543292 327
235 3300006186 Ga0075369_10022306 Ga0075369_100223062 327
236 3300006195 Ga0075366_10010678 Ga0075366_100106783 327
237 3300006353 Ga0075370_10006381 Ga0075370_100063816 327
238 3300009765 Ga0123341_1000006 Ga0123341_100000676 327
239 3300025245 Ga0207425_1004117 Ga0207425_10041175 327
240 3300025254 Ga0209148_1013854 Ga0209148_10138542 327
241 3300025258 Ga0209129_1000664 Ga0209129_100066420 327
242 3300025294 Ga0209025_1000720 Ga0209025_100072055 327
243 3300025294 Ga0209025_1001218 Ga0209025_100121834 327
244 3300025295 Ga0209564_1000968 Ga0209564_10009686 327
245 3300025297 Ga0209758_1000376 Ga0209758_100037645 327
246 3300025299 Ga0209256_1002312 Ga0209256_100231212 327
247 3300025302 Ga0207426_1000146 Ga0207426_1000146174 327
248 3300031456 Ga0307513_10002516 Ga0307513_1000251616 327
249 3300041491 Ga0451833_0310218 Ga0451833_0310218_65_1048 327
250 3300041501 Ga0451845_0974321 Ga0451845_0974321_65_1048 327
251 3300041512 Ga0451853_2201751 Ga0451853_2201751_1130_2113 327
252 3300042004 Ga0439445_0040462 Ga0439445_0040462_99_1082 327
253 3300048920 Ga0496117_0031342 Ga0496117_0031342_3007_3990 327
254 3300050492 nmdc:mga0yw44_26186_c2 nmdc:mga0yw44_26186_c2_1853_2836 327
255 3300050493 nmdc:mga0k408_9130_c2 nmdc:mga0k408_9130_c2_1301_2284 327
256 3300050494 nmdc:mga06z11_30057_c1 nmdc:mga06z11_30057_c1_264_1247 327
257 3300050496 nmdc:mga07m45_90661_c1 nmdc:mga07m45_90661_c1_523_1506 327
258 3300050516 nmdc:mga0sz30_25511_c1 nmdc:mga0sz30_25511_c1_1133_2116 327
259 iso_pu_bacteria 8055431914 8055434411 327
260 3300002737 JGI25162J39368_1000621 JGI25162J39368_100062121 329
261 3300003214 JGI25165J46597_1000018 JGI25165J46597_1000018190 329
262 3300025233 Ga0209437_100022 Ga0209437_100022252 329
263 3300025261 Ga0209233_1000031 Ga0209233_1000031252 329
264 3300026078 Ga0207702_10008923 Ga0207702_100089235 329
265 3300048927 Ga0496124_0018307 Ga0496124_0018307_4796_5785 329

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03741

TerC

Integral membrane protein TerC family

140

350

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
4ikz-assembly1.cif.gz_A crystal structure of peptide transporter pot (e310q mutant) in complex with alafosfalin 0.4016 19 290
6ghj-assembly1.cif.gz_A peptst in complex with tripeptide phe-ala-gln 0.3949 17 290
7ckr-assembly1.cif.gz_A cryo-em structure of the human mct1/basigin-2 complex in the presence of anti-cancer drug candidate bay-8002 in the outward-open conformation. 0.3937 73 292
7zha-assembly1.cif.gz_A structure of human oct3 in complex with inhibitor decynium-22 0.3935 74 287
4ikw-assembly1.cif.gz_A crystal structure of peptide transporter pot in complex with sulfate 0.3866 19 290
ID Description Score Start End Superfamily
af_B9G125_1_232_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.5504 73 288 1.20.1250.20
af_P67127_16_204_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.5415 80 287 1.20.1250.20
af_P67127_16_204_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.5307 80 287 1.20.1250.20
af_B9G125_1_232_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.5175 73 288 1.20.1250.20
af_P38301_1_280_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.4912 19 290 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A1B9RWL2-F1-model_v4 Tellurium resistance protein TerC 0.9921 18 324 GO:0016020
AF-A0A0P0ZAA8-F1-model_v4 TerC family integral membrane protein 0.99 1 320 GO:0016020
AF-A0A2U0T7Z5-F1-model_v4 deleted 0.99 4 321
AF-A0A0L8BFE1-F1-model_v4 Membrane protein 0.9896 1 321 GO:0016020
AF-A0A246SLE2-F1-model_v4 Tellurium resistance protein TerC 0.9894 1 321 GO:0016020

Feature Viewer

pLDDT pTM Quality
83.16 0.82 High
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Predicted Structure (AlphaFold2)

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