F374073

General Info

Members Datasets Scaffolds Average Seq Length
266 185 532 296

Family's Representative Sequence

Representative Sequence 3300013102|Ga0157371_10122693|Ga0157371_101226931
Length 319
Sequence LTNRLNIFKPNNLNRRKFLHSSTTASTALLLSSLNTFSAPHPTAKTKADFKLKVLATNWGFTGTIDEYCAKVKKEGYDGIEIWWPIDESAHSALFAALKKYNLEVGFLTAGSQSNYREHFDTFKKMIDATAHNTIQRPLYINCHSGRDYFSYDDNKTFIDYTTELAKQTGIKICHETHRSRMLYSAPIARNFIERNPALRLTLDISHWCNVHETLLQDQKETVDLALQRVDHVHARIGHAEGPQVNDPRAPEWEGAVKAHFGWWDKVVETKKRNGEVLTVLTEFGPPDYMPTEPYTRKPLSDQWALNVYMMQLLRKRYG

Samples

Sample ID Description Type Environment
1 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
5 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
7 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
10 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
11 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
12 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
13 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
14 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
15 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
16 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
17 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
18 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
19 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
20 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
21 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
22 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
23 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
24 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
25 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
26 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
27 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
28 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
29 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
30 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
31 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
32 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
33 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
34 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
35 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
36 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
37 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
38 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
39 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
40 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
41 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
42 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
43 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
44 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
45 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
46 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
47 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
48 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
49 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
50 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
51 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
52 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
53 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
54 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
55 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
56 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
57 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
58 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
59 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
60 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
61 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
62 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
64 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
96 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
98 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
99 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
100 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
101 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
102 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
103 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
104 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
105 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
106 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
107 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
108 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
109 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
110 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
111 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
112 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
113 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
114 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
115 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
116 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
117 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
118 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
119 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
120 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
121 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
122 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
123 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
124 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
125 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
126 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
127 3300049513 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D25_A_7_control Metagenome Rhizosphere
128 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
129 3300049522 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C24_B_7_control Metagenome Rhizosphere
130 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
133 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
134 3300049651 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F3_A_0_drought Metagenome Rhizosphere
135 3300049653 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_A_0_control Metagenome Rhizosphere
136 3300049654 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_A_0_control Metagenome Rhizosphere
137 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
138 3300049662 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control Metagenome Rhizosphere
139 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
140 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
141 3300049674 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F11_A_3_drought Metagenome Rhizosphere
142 3300049675 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control Metagenome Rhizosphere
143 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
144 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
145 3300049690 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_A_4_drought Metagenome Rhizosphere
146 3300049704 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control Metagenome Rhizosphere
147 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
148 3300049707 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_B_2_drought Metagenome Rhizosphere
149 3300049708 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D14_A_3_control Metagenome Rhizosphere
150 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
151 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
152 3300049763 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_A_4_control Metagenome Rhizosphere
153 3300049765 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F14_B_4_drought Metagenome Rhizosphere
154 3300049766 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_B_4_drought Metagenome Rhizosphere
155 3300049767 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A15_B_4_drought Metagenome Rhizosphere
156 3300049774 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A25_A_5_drought Metagenome Rhizosphere
157 3300049778 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I22_A_5_control Metagenome Rhizosphere
158 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
159 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049851 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_B_0_drought Metagenome Rhizosphere
161 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
162 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
163 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
164 2522125168 Dyadobacter beijingensis DSM 21582 Isolate Rhizosphere
165 2585427687 Pedobacter borealis DSM 19626 Isolate Rhizosphere
166 2721755487 Sphingobacterium sp. B29 Isolate Rhizosphere
167 2739367651 Pedobacter sp. OK291 Isolate Unclassified
168 2818991460 Chitinophaga polysaccharea 1209 Isolate Unclassified
169 2840677318 Chitinophaga alhagiae T22 Isolate Unclassified
170 2842722452 Pedobacter sp. R-72249 Isolate Unclassified
171 2842909656 Pedobacter sp. R-72393 Isolate Unclassified
172 2849281842 Pedobacter sp. AK013 Isolate Rhizosphere
173 2852627209 Pedobacter sp. AK017 Isolate Rhizosphere
174 2883068021 Chitinophaga rhizosphaerae T16R-86 Isolate Rhizosphere
175 2884791551 Chitinophaga oryzae 1310 Isolate Unclassified
176 2896085136 Chitinophaga alhagiae T22 Isolate Unclassified
177 2896109856 Chitinophaga sp. SYP-B3965 Isolate Rhizosphere
178 2919186247 Pedobacter africanus 2697 Isolate Rhizosphere
179 2929177148 Chitinophaga sp. R-72269 Hybrid assembly Isolate Unclassified
180 2939664404 Pedobacter africanus 2990 Isolate Rhizosphere
181 2945977869 Chitinophaga sp. W2I13 Isolate Rhizosphere
182 2945997725 Pedobacter sp. W3I1 Isolate Rhizosphere
183 2946013367 Chitinophaga sp. W3I9 Isolate Rhizosphere
184 2954016120 Flavobacterium sp. W4I14 Isolate Rhizosphere
185 3003233435 Sphingobacterium shayense CrR18 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 91.73
Metatranscriptomes 0
Isolates 8.27

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.26
Nodule 0
Rhizoplane 1.88
Rhizosphere 88.35
Stem 0
Stem Tuber 0
Unclassified 15.04

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0157371_10122693 3300013102 Bacteria 1848
2 rootH2_10173136 3300003320 Bacteria 6670
3 rootL2_10295956 3300003322 Unclassified 3055
4 JGI25160J50197_1007868 3300003354 Unclassified 4120
5 JGI25160J50197_1011473 3300003354 Bacteria 3141
6 Ga0065714_10007944 3300005288 Bacteria 4513
7 Ga0065714_10165386 3300005288 Bacteria 1030
8 Ga0065712_10082842 3300005290 Bacteria 2879
9 Ga0065712_10085757 3300005290 Bacteria 2663
10 Ga0070658_10345920 3300005327 Bacteria 1272
11 Ga0070658_10415747 3300005327 Bacteria 1156
12 Ga0070670_100020158 3300005331 Bacteria 5728
13 Ga0070670_100035249 3300005331 Bacteria 4309
14 Ga0070670_100305291 3300005331 Unclassified 1393
15 Ga0068869_100085295 3300005334 Bacteria 2365
16 Ga0070666_10044080 3300005335 Bacteria 2988
17 Ga0070680_100003518 3300005336 Bacteria 11694
18 Ga0070682_100002391 3300005337 Bacteria 10396
19 Ga0068868_100272311 3300005338 Bacteria 1431
20 Ga0070689_100047497 3300005340 Bacteria 3310
21 Ga0070691_10005009 3300005341 Bacteria 6026
22 Ga0070687_100102951 3300005343 Bacteria 1602
23 Ga0070668_100028114 3300005347 Bacteria 4269
24 Ga0070675_100159364 3300005354 Bacteria 1939
25 Ga0070671_100001926 3300005355 Bacteria 15908
26 Ga0070673_100195921 3300005364 Bacteria 1738
27 Ga0070688_100007671 3300005365 Bacteria 5827
28 Ga0070688_100129590 3300005365 Unclassified 1700
29 Ga0070667_100005157 3300005367 Bacteria 10931
30 Ga0070667_100107507 3300005367 Bacteria 2416
31 Ga0070663_100188290 3300005455 Bacteria 1605
32 Ga0068867_100055072 3300005459 Bacteria 2940
33 Ga0070698_100045424 3300005471 Bacteria 4496
34 Ga0068853_100052489 3300005539 Unclassified 3512
35 Ga0068853_100242006 3300005539 Unclassified 1654
36 Ga0070672_100028563 3300005543 Bacteria 4174
37 Ga0070672_100232000 3300005543 Unclassified 1551
38 Ga0070686_100142522 3300005544 Unclassified 1670
39 Ga0070693_100041994 3300005547 Unclassified 2576
40 Ga0068863_100193218 3300005841 Bacteria 1956
41 Ga0068858_100111114 3300005842 Unclassified 2559
42 Ga0068860_100091519 3300005843 Bacteria 2898
43 Ga0097621_100002030 3300006237 Bacteria 13854
44 Ga0068871_100000063 3300006358 Bacteria 58377
45 Ga0068871_100064805 3300006358 Bacteria 2992
46 Ga0068871_100299132 3300006358 Bacteria 1412
47 Ga0075428_100003886 3300006844 Bacteria 16418
48 Ga0075428_100024354 3300006844 Bacteria 6697
49 Ga0075428_100099955 3300006844 Bacteria 3163
50 Ga0075430_100095611 3300006846 Unclassified 2483
51 Ga0075429_100000564 3300006880 Bacteria 28419
52 Ga0075429_100398884 3300006880 Bacteria 1205
53 Ga0068865_100037822 3300006881 Unclassified 3262
54 Ga0105240_10005515 3300009093 Bacteria 18851
55 Ga0111539_10006374 3300009094 Bacteria 15219
56 Ga0111539_10011097 3300009094 Bacteria 11333
57 Ga0111539_10077415 3300009094 Bacteria 3914
58 Ga0111539_10088851 3300009094 Bacteria 3630
59 Ga0111539_10434015 3300009094 Bacteria 1529
60 Ga0105245_10720374 3300009098 Bacteria 1032
61 Ga0105243_10000012 3300009148 Bacteria 300885
62 Ga0105241_10453363 3300009174 Unclassified 1135
63 Ga0105242_10379004 3300009176 Unclassified 1314
64 Ga0105248_10032771 3300009177 Bacteria 5804
65 Ga0105248_10115456 3300009177 Unclassified 3028
66 Ga0105249_10000442 3300009553 Bacteria 39034
67 Ga0105249_10196992 3300009553 Bacteria 1969
68 Ga0105249_10618538 3300009553 Unclassified 1139
69 Ga0157373_10015158 3300013100 Bacteria 5638
70 Ga0157371_10163016 3300013102 Bacteria 1592
71 Ga0157370_10011590 3300013104 Bacteria 9203
72 Ga0157370_10216323 3300013104 Unclassified 1775
73 Ga0157369_10000005 3300013105 Bacteria 470816
74 Ga0157378_10074261 3300013297 Bacteria 3059
75 Ga0157378_10228853 3300013297 Bacteria 1771
76 Ga0157372_10424350 3300013307 Bacteria 1550
77 Ga0157372_10512399 3300013307 Unclassified 1399
78 Ga0157375_10001429 3300013308 Bacteria 20544
79 Ga0157375_10066765 3300013308 Bacteria 3592
80 Ga0157375_10069695 3300013308 Bacteria 3524
81 Ga0157375_10367679 3300013308 Bacteria 1604
82 Ga0157375_10741091 3300013308 Unclassified 1134
83 Ga0157380_10012008 3300014326 Bacteria 6269
84 Ga0157380_10139934 3300014326 Bacteria 2078
85 Ga0157380_10268679 3300014326 Bacteria 1553
86 Ga0157380_10301481 3300014326 Unclassified 1476
87 Ga0157377_10009011 3300014745 Bacteria 4885
88 Ga0157377_10129398 3300014745 Bacteria 1540
89 Ga0157379_10082420 3300014968 Bacteria 2882
90 Ga0157379_10088686 3300014968 Bacteria 2774
91 Ga0157379_10118338 3300014968 Bacteria 2383
92 Ga0157379_10586703 3300014968 Bacteria 1039
93 Ga0157376_10000481 3300014969 Bacteria 25767
94 Ga0157376_10118619 3300014969 Bacteria 2341
95 Ga0182006_1000105 3300015261 Bacteria 91439
96 Ga0182007_10000002 3300015262 Bacteria 564661
97 Ga0182007_10000023 3300015262 Bacteria 187131
98 Ga0163161_10000682 3300017792 Bacteria 27138
99 Ga0163161_10000983 3300017792 Bacteria 21826
100 Ga0163161_10001526 3300017792 Bacteria 17146
101 Ga0163161_10130603 3300017792 Unclassified 1894
102 Ga0163161_10149620 3300017792 Bacteria 1773
103 Ga0213876_10001180 3300021384 Bacteria 16518
104 Ga0209130_1002210 3300025284 Bacteria 10224
105 Ga0209676_1000463 3300025292 Bacteria 68309
106 Ga0207426_1000234 3300025302 Bacteria 126926
107 Ga0207426_1000279 3300025302 Bacteria 105187
108 Ga0207682_10104544 3300025893 Bacteria 1241
109 Ga0207647_10131773 3300025904 Bacteria 1469
110 Ga0207643_10010440 3300025908 Bacteria 5003
111 Ga0207654_10004336 3300025911 Bacteria 7149
112 Ga0207707_10000160 3300025912 Bacteria 70695
113 Ga0207695_10034905 3300025913 Bacteria 5462
114 Ga0207660_10001905 3300025917 Bacteria 13897
115 Ga0207662_10026845 3300025918 Bacteria 3323
116 Ga0207662_10094369 3300025918 Bacteria 1845
117 Ga0207652_10000406 3300025921 Bacteria 44756
118 Ga0207681_10037745 3300025923 Bacteria 3195
119 Ga0207650_10025766 3300025925 Bacteria 4190
120 Ga0207650_10076706 3300025925 Bacteria 2525
121 Ga0207650_10137555 3300025925 Bacteria 1917
122 Ga0207659_10044460 3300025926 Bacteria 3125
123 Ga0207659_10046009 3300025926 Unclassified 3079
124 Ga0207706_10210081 3300025933 Bacteria 1706
125 Ga0207686_10002041 3300025934 Bacteria 11127
126 Ga0207686_10075396 3300025934 Bacteria 2183
127 Ga0207709_10000006 3300025935 Bacteria 800946
128 Ga0207670_10012910 3300025936 Bacteria 4907
129 Ga0207670_10322785 3300025936 Bacteria 1215
130 Ga0207691_10022274 3300025940 Bacteria 5977
131 Ga0207691_10034732 3300025940 Bacteria 4687
132 Ga0207691_10365495 3300025940 Bacteria 1233
133 Ga0207689_10068397 3300025942 Bacteria 2919
134 Ga0207667_10034675 3300025949 Bacteria 5418
135 Ga0207651_10011392 3300025960 Bacteria 4979
136 Ga0207712_10000744 3300025961 Bacteria 24667
137 Ga0207712_10042058 3300025961 Bacteria 3145
138 Ga0207712_10197509 3300025961 Unclassified 1592
139 Ga0207668_10013735 3300025972 Bacteria 4996
140 Ga0207658_10004890 3300025986 Bacteria 9244
141 Ga0207658_10104900 3300025986 Unclassified 2222
142 Ga0207677_10108929 3300026023 Bacteria 2058
143 Ga0207703_10334697 3300026035 Unclassified 1390
144 Ga0207639_10024975 3300026041 Unclassified 4330
145 Ga0207641_10000275 3300026088 Bacteria 64649
146 Ga0207648_10004226 3300026089 Bacteria 14842
147 Ga0207648_10041747 3300026089 Bacteria 4029
148 Ga0207674_10059836 3300026116 Bacteria 3854
149 Ga0207674_10114874 3300026116 Bacteria 2664
150 Ga0207675_100000139 3300026118 Bacteria 62161
151 Ga0207675_100029760 3300026118 Bacteria 5085
152 Ga0207675_100050612 3300026118 Bacteria 3876
153 Ga0207698_10167924 3300026142 Unclassified 1928
154 Ga0207428_10023273 3300027907 Bacteria 5212
155 Ga0207428_10026109 3300027907 Bacteria 4879
156 Ga0268264_10174937 3300028381 Bacteria 1945
157 Ga0307515_10000001 3300028794 Bacteria 4259510
158 Ga0265327_10000191 3300031251 Bacteria 130083
159 Ga0265327_10000632 3300031251 Bacteria 57391
160 Ga0265327_10034808 3300031251 Unclassified 2790
161 Ga0265327_10195143 3300031251 Unclassified 919
162 Ga0307405_10000030 3300031731 Bacteria 99574
163 Ga0307407_10000023 3300031903 Bacteria 118352
164 Ga0307416_100000049 3300032002 Bacteria 118358
165 Ga0307414_10033521 3300032004 Bacteria 3396
166 Ga0307414_10229336 3300032004 Unclassified 1530
167 Ga0307414_10232225 3300032004 Bacteria 1522
168 Ga0373937_0180931 3300036401 Bacteria 1980
169 Ga0395905_0306614 3300037471 Unclassified 1476
170 Ga0436365_1472596 3300039437 Bacteria 1802
171 Ga0436365_1642374 3300039437 Bacteria 37274
172 Ga0451807_0445171 3300041486 Bacteria 2088
173 Ga0439431_0003230 3300041997 Bacteria 3585
174 Ga0439431_0027431 3300041997 Unclassified 1399
175 Ga0439445_0009522 3300042004 Bacteria 2290
176 Ga0439434_0003054 3300042435 Bacteria 4908
177 Ga0451577_0252608 3300042876 Unclassified 1596
178 Ga0466972_0000025 3300044658 Bacteria 186601
179 Ga0453683_0112741 3300044673 Bacteria 1711
180 Ga0466970_0000456 3300044765 Bacteria 20144
181 Ga0466970_0114489 3300044765 Bacteria 1474
182 Ga0451576_0107819 3300045051 Bacteria 2898
183 Ga0495638_0154085 3300046460 Bacteria 1331
184 Ga0495610_0000151 3300046512 Bacteria 76854
185 Ga0495610_0000517 3300046512 Bacteria 38786
186 Ga0495621_0056508 3300046539 Bacteria 1415
187 Ga0495625_0279283 3300046660 Unclassified 1075
188 Ga0496104_0298664 3300048907 Bacteria 1523
189 Ga0496105_0239214 3300048908 Bacteria 1474
190 Ga0496114_0053544 3300048917 Bacteria 3364
191 Ga0496114_0525097 3300048917 Bacteria 1047
192 Ga0496116_0003821 3300048919 Bacteria 14715
193 Ga0496117_0005854 3300048920 Bacteria 12724
194 Ga0496122_0003017 3300048925 Bacteria 22834
195 Ga0496123_0014865 3300048926 Bacteria 6423
196 Ga0496125_0130299 3300048928 Bacteria 1772
197 Ga0501290_003685 3300049513 Unclassified 1924
198 Ga0501298_000207 3300049521 Bacteria 7468
199 Ga0501299_003552 3300049522 Bacteria 2268
200 Ga0501034_0010281 3300049571 Bacteria 9758
201 Ga0501034_0115768 3300049571 Bacteria 2669
202 Ga0501046_0059292 3300049580 Bacteria 2999
203 Ga0501069_0032943 3300049585 Bacteria 2852
204 Ga0501070_0037294 3300049586 Bacteria 4058
205 Ga0501201_000061 3300049651 Bacteria 7741
206 Ga0501206_000628 3300049653 Bacteria 4245
207 Ga0501207_001146 3300049654 Bacteria 3249
208 Ga0501217_004623 3300049661 Bacteria 2837
209 Ga0501222_001442 3300049662 Bacteria 3333
210 Ga0501223_002363 3300049663 Bacteria 4208
211 Ga0501235_000701 3300049669 Bacteria 6801
212 Ga0501242_000966 3300049674 Unclassified 2761
213 Ga0501243_000194 3300049675 Bacteria 7285
214 Ga0501257_002254 3300049686 Bacteria 4045
215 Ga0501259_000593 3300049688 Bacteria 5787
216 Ga0501259_000887 3300049688 Bacteria 4932
217 Ga0501261_001951 3300049690 Bacteria 2544
218 Ga0501221_000127 3300049704 Bacteria 9666
219 Ga0501225_0001609 3300049705 Bacteria 7064
220 Ga0501234_008895 3300049707 Bacteria 1565
221 Ga0501245_001516 3300049708 Bacteria 3019
222 Ga0501083_0052172 3300049744 Bacteria 2748
223 Ga0501241_006661 3300049758 Bacteria 2122
224 Ga0501266_000258 3300049763 Bacteria 6990
225 Ga0501268_003299 3300049765 Unclassified 2199
226 Ga0501268_003578 3300049765 Bacteria 2137
227 Ga0501269_006150 3300049766 Bacteria 1446
228 Ga0501270_000844 3300049767 Unclassified 2773
229 Ga0501278_005334 3300049774 Bacteria 943
230 Ga0501282_001293 3300049778 Unclassified 2795
231 Ga0501035_0441350 3300049822 Bacteria 1078
232 Ga0501044_0019370 3300049823 Bacteria 7283
233 Ga0501044_0056108 3300049823 Bacteria 4044
234 Ga0501212_009693 3300049851 Bacteria 1361
235 Ga0501212_012083 3300049851 Bacteria 1252
236 nmdc:mga09592_23089_c1 3300050508 Bacteria 5135
237 nmdc:mga09592_469055_c1 3300050508 Bacteria 1085
238 nmdc:mga0qj67_233594_c1 3300050509 Bacteria 1492
239 nmdc:mga08y16_154065_c1 3300050511 Unclassified 2388
240 nmdc:mga08y16_269576_c1 3300050511 Bacteria 1757
241 nmdc:mga08y16_2798_c1 3300050511 Bacteria 17889
242 nmdc:mga08y16_344358_c1 3300050511 Bacteria 1532
243 nmdc:mga08y16_68982_c1 3300050511 Bacteria 3686
244 nmdc:mga08y16_8157_c1 3300050511 Bacteria 10958
245 2522552355 2522125168 Bacteria 7376607
246 2586208694 2585427687 Bacteria 5544917
247 2722729194 2721755487 Bacteria 6357185
248 2739591218 2739367651 Bacteria 6359826
249 2819679945 2818991460 Bacteria 7595395
250 2840678387 2840677318 Bacteria 2664183
251 2842723307 2842722452 Bacteria 6263924
252 2842909799 2842909656 Bacteria 6185908
253 2849285319 2849281842 Bacteria 6065644
254 2852628755 2852627209 Bacteria 5896285
255 2883071299 2883068021 Bacteria 6192739
256 2884794502 2884791551 Bacteria 8511252
257 2896086204 2896085136 Bacteria 6129793
258 2896115591 2896109856 Bacteria 7140722
259 2919186316 2919186247 Bacteria 6244071
260 2929179951 2929177148 Bacteria 7883697
261 2939666414 2939664404 Bacteria 6364494
262 2945982372 2945977869 Bacteria 7777518
263 2946000111 2945997725 Bacteria 6404843
264 2946018240 2946013367 Bacteria 7766675
265 2954017028 2954016120 Bacteria 6446024
266 3003236118 3003233435 Bacteria 4458031
267 Ga0157371_10122693
268 rootH2_10173136
269 rootL2_10295956
270 JGI25160J50197_1007868
271 JGI25160J50197_1011473
272 Ga0065714_10007944
273 Ga0065714_10165386
274 Ga0065712_10082842
275 Ga0065712_10085757
276 Ga0070658_10345920
277 Ga0070658_10415747
278 Ga0070670_100020158
279 Ga0070670_100035249
280 Ga0070670_100305291
281 Ga0068869_100085295
282 Ga0070666_10044080
283 Ga0070680_100003518
284 Ga0070682_100002391
285 Ga0068868_100272311
286 Ga0070689_100047497
287 Ga0070691_10005009
288 Ga0070687_100102951
289 Ga0070668_100028114
290 Ga0070675_100159364
291 Ga0070671_100001926
292 Ga0070673_100195921
293 Ga0070688_100007671
294 Ga0070688_100129590
295 Ga0070667_100005157
296 Ga0070667_100107507
297 Ga0070663_100188290
298 Ga0068867_100055072
299 Ga0070698_100045424
300 Ga0068853_100052489
301 Ga0068853_100242006
302 Ga0070672_100028563
303 Ga0070672_100232000
304 Ga0070686_100142522
305 Ga0070693_100041994
306 Ga0068863_100193218
307 Ga0068858_100111114
308 Ga0068860_100091519
309 Ga0097621_100002030
310 Ga0068871_100000063
311 Ga0068871_100064805
312 Ga0068871_100299132
313 Ga0075428_100003886
314 Ga0075428_100024354
315 Ga0075428_100099955
316 Ga0075430_100095611
317 Ga0075429_100000564
318 Ga0075429_100398884
319 Ga0068865_100037822
320 Ga0105240_10005515
321 Ga0111539_10006374
322 Ga0111539_10011097
323 Ga0111539_10077415
324 Ga0111539_10088851
325 Ga0111539_10434015
326 Ga0105245_10720374
327 Ga0105243_10000012
328 Ga0105241_10453363
329 Ga0105242_10379004
330 Ga0105248_10032771
331 Ga0105248_10115456
332 Ga0105249_10000442
333 Ga0105249_10196992
334 Ga0105249_10618538
335 Ga0157373_10015158
336 Ga0157371_10163016
337 Ga0157370_10011590
338 Ga0157370_10216323
339 Ga0157369_10000005
340 Ga0157378_10074261
341 Ga0157378_10228853
342 Ga0157372_10424350
343 Ga0157372_10512399
344 Ga0157375_10001429
345 Ga0157375_10066765
346 Ga0157375_10069695
347 Ga0157375_10367679
348 Ga0157375_10741091
349 Ga0157380_10012008
350 Ga0157380_10139934
351 Ga0157380_10268679
352 Ga0157380_10301481
353 Ga0157377_10009011
354 Ga0157377_10129398
355 Ga0157379_10082420
356 Ga0157379_10088686
357 Ga0157379_10118338
358 Ga0157379_10586703
359 Ga0157376_10000481
360 Ga0157376_10118619
361 Ga0182006_1000105
362 Ga0182007_10000002
363 Ga0182007_10000023
364 Ga0163161_10000682
365 Ga0163161_10000983
366 Ga0163161_10001526
367 Ga0163161_10130603
368 Ga0163161_10149620
369 Ga0213876_10001180
370 Ga0209130_1002210
371 Ga0209676_1000463
372 Ga0207426_1000234
373 Ga0207426_1000279
374 Ga0207682_10104544
375 Ga0207647_10131773
376 Ga0207643_10010440
377 Ga0207654_10004336
378 Ga0207707_10000160
379 Ga0207695_10034905
380 Ga0207660_10001905
381 Ga0207662_10026845
382 Ga0207662_10094369
383 Ga0207652_10000406
384 Ga0207681_10037745
385 Ga0207650_10025766
386 Ga0207650_10076706
387 Ga0207650_10137555
388 Ga0207659_10044460
389 Ga0207659_10046009
390 Ga0207706_10210081
391 Ga0207686_10002041
392 Ga0207686_10075396
393 Ga0207709_10000006
394 Ga0207670_10012910
395 Ga0207670_10322785
396 Ga0207691_10022274
397 Ga0207691_10034732
398 Ga0207691_10365495
399 Ga0207689_10068397
400 Ga0207667_10034675
401 Ga0207651_10011392
402 Ga0207712_10000744
403 Ga0207712_10042058
404 Ga0207712_10197509
405 Ga0207668_10013735
406 Ga0207658_10004890
407 Ga0207658_10104900
408 Ga0207677_10108929
409 Ga0207703_10334697
410 Ga0207639_10024975
411 Ga0207641_10000275
412 Ga0207648_10004226
413 Ga0207648_10041747
414 Ga0207674_10059836
415 Ga0207674_10114874
416 Ga0207675_100000139
417 Ga0207675_100029760
418 Ga0207675_100050612
419 Ga0207698_10167924
420 Ga0207428_10023273
421 Ga0207428_10026109
422 Ga0268264_10174937
423 Ga0307515_10000001
424 Ga0265327_10000191
425 Ga0265327_10000632
426 Ga0265327_10034808
427 Ga0265327_10195143
428 Ga0307405_10000030
429 Ga0307407_10000023
430 Ga0307416_100000049
431 Ga0307414_10033521
432 Ga0307414_10229336
433 Ga0307414_10232225
434 Ga0373937_0180931
435 Ga0395905_0306614
436 Ga0436365_1472596
437 Ga0436365_1642374
438 Ga0451807_0445171
439 Ga0439431_0003230
440 Ga0439431_0027431
441 Ga0439445_0009522
442 Ga0439434_0003054
443 Ga0451577_0252608
444 Ga0466972_0000025
445 Ga0453683_0112741
446 Ga0466970_0000456
447 Ga0466970_0114489
448 Ga0451576_0107819
449 Ga0495638_0154085
450 Ga0495610_0000151
451 Ga0495610_0000517
452 Ga0495621_0056508
453 Ga0495625_0279283
454 Ga0496104_0298664
455 Ga0496105_0239214
456 Ga0496114_0053544
457 Ga0496114_0525097
458 Ga0496116_0003821
459 Ga0496117_0005854
460 Ga0496122_0003017
461 Ga0496123_0014865
462 Ga0496125_0130299
463 Ga0501290_003685
464 Ga0501298_000207
465 Ga0501299_003552
466 Ga0501034_0010281
467 Ga0501034_0115768
468 Ga0501046_0059292
469 Ga0501069_0032943
470 Ga0501070_0037294
471 Ga0501201_000061
472 Ga0501206_000628
473 Ga0501207_001146
474 Ga0501217_004623
475 Ga0501222_001442
476 Ga0501223_002363
477 Ga0501235_000701
478 Ga0501242_000966
479 Ga0501243_000194
480 Ga0501257_002254
481 Ga0501259_000593
482 Ga0501259_000887
483 Ga0501261_001951
484 Ga0501221_000127
485 Ga0501225_0001609
486 Ga0501234_008895
487 Ga0501245_001516
488 Ga0501083_0052172
489 Ga0501241_006661
490 Ga0501266_000258
491 Ga0501268_003299
492 Ga0501268_003578
493 Ga0501269_006150
494 Ga0501270_000844
495 Ga0501278_005334
496 Ga0501282_001293
497 Ga0501035_0441350
498 Ga0501044_0019370
499 Ga0501044_0056108
500 Ga0501212_009693
501 Ga0501212_012083
502 nmdc:mga09592_23089_c1
503 nmdc:mga09592_469055_c1
504 nmdc:mga0qj67_233594_c1
505 nmdc:mga08y16_154065_c1
506 nmdc:mga08y16_269576_c1
507 nmdc:mga08y16_2798_c1
508 nmdc:mga08y16_344358_c1
509 nmdc:mga08y16_68982_c1
510 nmdc:mga08y16_8157_c1
511 2522552355
512 2586208694
513 2722729194
514 2739591218
515 2819679945
516 2840678387
517 2842723307
518 2842909799
519 2849285319
520 2852628755
521 2883071299
522 2884794502
523 2896086204
524 2896115591
525 2919186316
526 2929179951
527 2939666414
528 2945982372
529 2946000111
530 2946018240
531 2954017028
532 3003236118

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01261

AP_endonuc_2

Xylose isomerase-like TIM barrel

69

263

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
1oy0-assembly1.cif.gz_A the crystal structure of the first enzyme of pantothenate biosynthetic pathway, ketopantoate hydroxymethyltransferase from mycobacterium tuberculosis shows a decameric assembly and terminal helix-swapping 0.7245 43 164
3vav-assembly1.cif.gz_E crystal structure of 3-methyl-2-oxobutanoate hydroxymethyltransferase from burkholderia thailandensis 0.6895 42 164
3cny-assembly2.cif.gz_B crystal structure of a putative inositol catabolism protein iole (iole, lp_3607) from lactobacillus plantarum wcfs1 at 1.85 a resolution 0.6602 41 310
3ngf-assembly1.cif.gz_A crystal structure of ap endonuclease, family 2 from brucella melitensis 0.6591 42 301
6wn6-assembly1.cif.gz_A crystal structure of 3-keto-d-glucoside 4-epimerase, ycjr, from e. coli, apo form 0.6574 40 305
ID Description Score Start End Superfamily
af_C0H4L8_1_160_3.30.420.110 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;MutS, connector domain 0.8074 57 96 3.30.420.110
1oy0A00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Phosphoenolpyruvate-binding domains 0.7245 43 164 3.20.20.60
af_Q60319_32_220_3.20.20.150 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Divalent-metal-dependent TIM barrel enzymes 0.7166 95 278 3.20.20.150
af_P76044_1_262_3.20.20.150 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Divalent-metal-dependent TIM barrel enzymes 0.6822 42 305 3.20.20.150
af_P30147_1_258_3.20.20.150 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Divalent-metal-dependent TIM barrel enzymes 0.6814 40 301 3.20.20.150
ID Description Score Start End GO Terms
AF-A0A3B7MWC2-F1-model_v4 Sugar phosphate isomerase/epimerase 0.9831 26 308 GO:0016853
AF-A0A1A9I900-F1-model_v4 Xylose isomerase 0.9798 33 308 GO:0016853
AF-A0A1A9I900-F1-model_v4 Xylose isomerase 0.9763 33 308 GO:0016853
AF-A0A519UHN9-F1-model_v4 Sugar phosphate isomerase/epimerase 0.9728 153 307 GO:0016853
AF-A0A521E4N9-F1-model_v4 Xylose isomerase-like TIM barrel 0.9688 171 307

Map