F374259
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 266 | 161 | 532 | 327 |
Family's Representative Sequence
| Representative Sequence | 3300045051|Ga0451576_0004283|Ga0451576_0004283_5525_6547 |
| Length | 327 |
| Sequence | MSFKRTALSVAALMTASLLGSASVLAKDAPALVELGKKLYFDTRLSKSGFISCNSCHNLSLGGTDNLKTSIGHNWQKGPINAPTVLNSSMNLAQFWDGRAKDLQAQAGGPIANPGEMASTHELAIDVIKSIPGYQAEFDKAFGHETVRPARIDIERVTRAIAAFEETLVTPNARFDKWLKGDKKALTATELAGYKLFKDSGCVACHNGPAVGGNSFQKMGVVEAYKATSPAEGRVAVTKDEADRFNFKVPTLRNVELTYPYFHDGEAVTLTQAVDTMGRIQLGKTFSADENGKIVAFLKTLTGEQPKFALPILPPSSDATPRPTPFE |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 2 | 3300002771 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB | Metagenome | Endosphere |
| 3 | 3300002772 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS | Metagenome | Endosphere |
| 4 | 3300003187 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB | Metagenome | Endosphere |
| 5 | 3300003214 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL | Metagenome | Endosphere |
| 6 | 3300003771 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 | Metagenome | Endosphere |
| 7 | 3300003775 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 | Metagenome | Endosphere |
| 8 | 3300003781 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 | Metagenome | Endosphere |
| 9 | 3300003784 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 | Metagenome | Endosphere |
| 10 | 3300003792 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 | Metagenome | Endosphere |
| 11 | 3300005289 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) | Metagenome | Rhizosphere |
| 12 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 15 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 16 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 17 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 18 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 19 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 20 | 3300014497 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG | Metagenome | Rhizosphere |
| 21 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 22 | 3300025207 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 23 | 3300025231 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 24 | 3300025233 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) | Metagenome | Endosphere |
| 25 | 3300025261 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) | Metagenome | Endosphere |
| 26 | 3300025284 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 27 | 3300025291 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 28 | 3300025292 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 29 | 3300025294 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 30 | 3300025295 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 31 | 3300025299 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 32 | 3300025303 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 33 | 3300025304 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 34 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 35 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 36 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 37 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 38 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 39 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 40 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 41 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 44 | 3300029957 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG | Metagenome | Rhizosphere |
| 45 | 3300031238 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG | Metagenome | Rhizosphere |
| 46 | 3300031240 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG | Metagenome | Rhizosphere |
| 47 | 3300031241 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG | Metagenome | Rhizosphere |
| 48 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 49 | 3300031665 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 | Metagenome | Rhizosphere |
| 50 | 3300031691 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA | Metagenome | Rhizosphere |
| 51 | 3300031727 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 | Metagenome | Rhizosphere |
| 52 | 3300031728 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC | Metagenome | Rhizosphere |
| 53 | 3300031730 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM | Metagenome | Unclassified |
| 54 | 3300031733 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 | Metagenome | Rhizosphere |
| 55 | 3300032133 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA | Metagenome | Rhizosphere |
| 56 | 3300032139 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB | Metagenome | Rhizosphere |
| 57 | 3300032168 | Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 58 | 3300033524 | Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 59 | 3300033527 | Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 60 | 3300033528 | Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 61 | 3300035398 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 | Metagenome | Rhizosphere |
| 62 | 3300036647 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA | Metagenome | Rhizosphere |
| 63 | 3300036712 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA | Metagenome | Rhizosphere |
| 64 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 65 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 66 | 3300038725 | Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 | Metagenome | Unclassified |
| 67 | 3300038726 | Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 | Metagenome | Unclassified |
| 68 | 3300038727 | Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 | Metagenome | Unclassified |
| 69 | 3300038735 | Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 | Metagenome | Unclassified |
| 70 | 3300038741 | Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 | Metagenome | Unclassified |
| 71 | 3300038742 | Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 | Metagenome | Unclassified |
| 72 | 3300039062 | Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 | Metagenome | Unclassified |
| 73 | 3300039093 | Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 | Metagenome | Unclassified |
| 74 | 3300039110 | Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 | Metagenome | Unclassified |
| 75 | 3300042439 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 | Metagenome | Rhizosphere |
| 76 | 3300042533 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0826F_E14_072516_1472 | Metagenome | Rhizosphere |
| 77 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 78 | 3300044673 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED | Metagenome | Rhizosphere |
| 79 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 80 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 81 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 82 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 83 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 84 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 85 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 86 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 87 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 88 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 89 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 90 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 91 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 92 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 93 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 94 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 95 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 96 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 97 | 3300049576 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 98 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 99 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 100 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 101 | 3300049582 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 102 | 3300049584 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 | Metagenome | Rhizosphere |
| 103 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 104 | 3300049587 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 | Metagenome | Rhizosphere |
| 105 | 3300049591 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 | Metagenome | Rhizosphere |
| 106 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 107 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 108 | 3300049824 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 109 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 110 | 3300053125 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere | Metagenome | Endosphere |
| 111 | 3300061734 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) | Metagenome | Rhizosphere |
| 112 | 2526164512 | Azovibrio restrictus DSM 23866 | Isolate | Unclassified |
| 113 | 2547132512 | Azospira oryzae 6a3 | Isolate | Unclassified |
| 114 | 2551306416 | Herbaspirillum seropedicae Os34 | Isolate | Unclassified |
| 115 | 2554235341 | Pseudomonas protegens CHA0 | Isolate | Rhizosphere |
| 116 | 2574179768 | Azoarcus communis DSM 12120 | Isolate | Unclassified |
| 117 | 2597490356 | Azospirillum brasilense sp7 | Isolate | Unclassified |
| 118 | 2599185160 | Pseudomonas sp. NFPP25 | Isolate | Rhizoplane |
| 119 | 2599185161 | Pseudomonas sp. NFPP09 | Isolate | Rhizoplane |
| 120 | 2599185162 | Pseudomonas sp. NFPP10 | Isolate | Rhizoplane |
| 121 | 2599185163 | Pseudomonas sp. NFPP12 | Isolate | Rhizoplane |
| 122 | 2599185164 | Pseudomonas sp. NFPP13 | Isolate | Rhizoplane |
| 123 | 2599185165 | Pseudomonas sp. NFPP18 | Isolate | Rhizoplane |
| 124 | 2599185166 | Pseudomonas sp. NFPP08 | Isolate | Rhizoplane |
| 125 | 2599185168 | Pseudomonas sp. NFPP05 | Isolate | Rhizoplane |
| 126 | 2599185181 | Pseudomonas sp. NFPP17 | Isolate | Rhizoplane |
| 127 | 2599185182 | Pseudomonas sp. NFPP19 | Isolate | Rhizoplane |
| 128 | 2599185186 | Pseudomonas sp. NFPP15 | Isolate | Rhizoplane |
| 129 | 2599185356 | Pseudomonas sp. NFPP14 | Isolate | Rhizoplane |
| 130 | 2600254954 | Pseudomonas sp. NFACC19-2 | Isolate | Rhizoplane |
| 131 | 2600255292 | Janthinobacterium lividum NFR18 | Isolate | Rhizoplane |
| 132 | 2600255313 | Pseudomonas sp. NFPP16 | Isolate | Rhizoplane |
| 133 | 2600255389 | Pseudomonas sp. NFPP33 | Isolate | Rhizoplane |
| 134 | 2667528171 | Pseudomonas sp. NFPP22 | Isolate | Rhizoplane |
| 135 | 2818991464 | Pseudomonas protegens 3295 | Isolate | Rhizosphere |
| 136 | 2823421272 | Pseudomonas mendocina S5.2 | Isolate | Rhizoplane |
| 137 | 2842718218 | Acidovorax sp. R-73343 | Isolate | Unclassified |
| 138 | 2844665904 | Pseudomonas protegens H1F10C | Isolate | Unclassified |
| 139 | 2846952575 | Azospirillum brasilense sp7 | Isolate | Unclassified |
| 140 | 2848858292 | Azospirillum brasilense Az39 | Isolate | Unclassified |
| 141 | 2857547612 | Janthinobacterium sp. R-74502 | Isolate | Unclassified |
| 142 | 2857564685 | Duganella sp. R-74599 | Isolate | Unclassified |
| 143 | 2885080285 | Janthinobacterium sp. AD80 | Isolate | Rhizosphere |
| 144 | 2891633521 | Azoarcus rhizosphaerae CC-YHH848 | Isolate | Rhizosphere |
| 145 | 2919493220 | Aeromonas salmonicida salmonicida 3466 | Isolate | Unclassified |
| 146 | 2919497567 | Shewanella putrefaciens 3469 | Isolate | Unclassified |
| 147 | 2919501602 | Pseudomonas alcaliphila 3512 | Isolate | Unclassified |
| 148 | 2919543075 | Aeromonas salmonicida masoucida 4076 | Isolate | Unclassified |
| 149 | 2926063275 | Pseudomonas sp. 3400 | Isolate | Unclassified |
| 150 | 2928130867 | Herbaspirillum seropedicae 1977 | Isolate | Unclassified |
| 151 | 2932410948 | Janthinobacterium lividum 2829 | Isolate | Rhizosphere |
| 152 | 2932416698 | Janthinobacterium lividum 2830 | Isolate | Rhizosphere |
| 153 | 2935353572 | Pseudomonas protegens TECH19 | Isolate | Unclassified |
| 154 | 2974320154 | Acidovorax wautersii SORGH_AS 335 | Isolate | Unclassified |
| 155 | 2990196909 | Pseudomonas mangrovi TC-11 | Isolate | Unclassified |
| 156 | 637000220 | Pseudomonas protegens Pf-5 | Isolate | Rhizoplane |
| 157 | 639633007 | Azoarcus olearius BH72 | Isolate | Unclassified |
| 158 | 8002392321 | Alcaligenes faecalis Mc250 | Isolate | Rhizosphere |
| 159 | 8019769354 | Pseudomonas sp. MSSRFD41 | Isolate | Rhizosphere |
| 160 | 8048746797 | Alcaligenes endophyticus DSM 100498 | Isolate | Unclassified |
| 161 | 8057798959 | Pseudomonas piscis BW16M1 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 79.7 |
| Metatranscriptomes | 1.5 |
| Isolates | 18.8 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 9.77 |
| Nodule | 0 |
| Rhizoplane | 9.02 |
| Rhizosphere | 50 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0.75 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0451576_0004283 | 3300045051 | Bacteria | 18688 |
| 2 | JGI25163J39215_1001191 | 3300002771 | Bacteria | 4970 |
| 3 | JGI25164J39214_1000322 | 3300002772 | Bacteria | 30955 |
| 4 | JGI25151J46595_10007354 | 3300003187 | Bacteria | 5408 |
| 5 | JGI25165J46597_1000293 | 3300003214 | Bacteria | 63232 |
| 6 | Ga0055526_1018639 | 3300003771 | Bacteria | 2580 |
| 7 | Ga0055524_1004049 | 3300003775 | Bacteria | 6894 |
| 8 | Ga0055524_1026885 | 3300003775 | Bacteria | 1763 |
| 9 | Ga0055536_1000026 | 3300003781 | Bacteria | 166220 |
| 10 | Ga0055534_1003051 | 3300003784 | Bacteria | 5484 |
| 11 | Ga0055540_1017352 | 3300003792 | Bacteria | 2013 |
| 12 | Ga0065704_10107449 | 3300005289 | Bacteria | 2055 |
| 13 | Ga0070714_100011485 | 3300005435 | Bacteria | 7025 |
| 14 | Ga0070662_100159103 | 3300005457 | Bacteria | 1765 |
| 15 | Ga0068855_100008682 | 3300005563 | Bacteria | 12281 |
| 16 | Ga0068855_100146900 | 3300005563 | Bacteria | 2683 |
| 17 | Ga0068854_100004286 | 3300005578 | Bacteria | 8988 |
| 18 | Ga0105243_10000135 | 3300009148 | Bacteria | 84432 |
| 19 | Ga0105237_10065634 | 3300009545 | Bacteria | 3625 |
| 20 | Ga0105249_10047413 | 3300009553 | Bacteria | 3915 |
| 21 | Ga0157371_10000479 | 3300013102 | Bacteria | 48841 |
| 22 | Ga0182008_10000092 | 3300014497 | Bacteria | 68381 |
| 23 | Ga0182008_10089530 | 3300014497 | Bacteria | 1517 |
| 24 | Ga0163161_10044994 | 3300017792 | Bacteria | 3181 |
| 25 | Ga0209760_100108 | 3300025207 | Bacteria | 59315 |
| 26 | Ga0207427_100007 | 3300025231 | Bacteria | 746220 |
| 27 | Ga0209437_100006 | 3300025233 | Bacteria | 1042724 |
| 28 | Ga0209233_1000059 | 3300025261 | Bacteria | 414562 |
| 29 | Ga0209130_1027202 | 3300025284 | Bacteria | 1218 |
| 30 | Ga0209675_1000026 | 3300025291 | Bacteria | 284716 |
| 31 | Ga0209675_1001768 | 3300025291 | Bacteria | 11821 |
| 32 | Ga0209676_1000059 | 3300025292 | Bacteria | 344882 |
| 33 | Ga0209025_1000066 | 3300025294 | Bacteria | 298742 |
| 34 | Ga0209025_1000463 | 3300025294 | Bacteria | 79362 |
| 35 | Ga0209564_1000161 | 3300025295 | Bacteria | 162489 |
| 36 | Ga0209256_1000562 | 3300025299 | Bacteria | 53066 |
| 37 | Ga0209256_1001496 | 3300025299 | Bacteria | 23700 |
| 38 | Ga0209051_1009604 | 3300025303 | Bacteria | 4968 |
| 39 | Ga0209257_1007225 | 3300025304 | Bacteria | 6797 |
| 40 | Ga0207684_10064751 | 3300025910 | Bacteria | 3103 |
| 41 | Ga0207671_10001710 | 3300025914 | Bacteria | 24779 |
| 42 | Ga0207664_10001973 | 3300025929 | Bacteria | 13502 |
| 43 | Ga0207690_10138044 | 3300025932 | Bacteria | 1793 |
| 44 | Ga0207709_10000251 | 3300025935 | Bacteria | 64622 |
| 45 | Ga0207667_10000043 | 3300025949 | Bacteria | 261426 |
| 46 | Ga0207667_10111620 | 3300025949 | Bacteria | 2820 |
| 47 | Ga0207639_10272501 | 3300026041 | Bacteria | 1485 |
| 48 | Ga0207702_10136013 | 3300026078 | Bacteria | 2217 |
| 49 | Ga0207683_10290510 | 3300026121 | Bacteria | 1495 |
| 50 | Ga0307515_10007242 | 3300028794 | Bacteria | 21968 |
| 51 | Ga0265324_10032461 | 3300029957 | Bacteria | 1824 |
| 52 | Ga0265332_10000077 | 3300031238 | Bacteria | 84198 |
| 53 | Ga0265332_10036982 | 3300031238 | Bacteria | 2118 |
| 54 | Ga0265320_10004947 | 3300031240 | Bacteria | 8643 |
| 55 | Ga0265325_10001610 | 3300031241 | Bacteria | 15743 |
| 56 | Ga0307408_100000002 | 3300031548 | Bacteria | 827227 |
| 57 | Ga0316575_10021516 | 3300031665 | Bacteria | 2483 |
| 58 | Ga0316575_10053478 | 3300031665 | Bacteria | 1608 |
| 59 | Ga0316579_10019603 | 3300031691 | Bacteria | 2990 |
| 60 | Ga0316579_10067845 | 3300031691 | Bacteria | 1686 |
| 61 | Ga0316576_10022042 | 3300031727 | Bacteria | 4417 |
| 62 | Ga0316576_10170799 | 3300031727 | Bacteria | 1641 |
| 63 | Ga0316578_10061234 | 3300031728 | Bacteria | 2217 |
| 64 | Ga0316578_10067015 | 3300031728 | Bacteria | 2121 |
| 65 | Ga0307516_10005605 | 3300031730 | Bacteria | 14948 |
| 66 | Ga0316577_10021837 | 3300031733 | Bacteria | 3551 |
| 67 | Ga0316583_10001755 | 3300032133 | Bacteria | 7367 |
| 68 | Ga0316583_10005451 | 3300032133 | Bacteria | 4566 |
| 69 | Ga0316580_10027177 | 3300032139 | Bacteria | 1769 |
| 70 | Ga0316593_10054905 | 3300032168 | Bacteria | 1353 |
| 71 | Ga0316592_1018115 | 3300033524 | Bacteria | 1482 |
| 72 | Ga0316586_1005870 | 3300033527 | Bacteria | 1744 |
| 73 | Ga0316588_1026429 | 3300033528 | Bacteria | 1345 |
| 74 | Ga0316574_0001289 | 3300035398 | Bacteria | 11723 |
| 75 | Ga0316574_0002085 | 3300035398 | Bacteria | 9891 |
| 76 | Ga0316574_0009414 | 3300035398 | Bacteria | 5472 |
| 77 | Ga0316574_0015346 | 3300035398 | Bacteria | 4444 |
| 78 | Ga0316574_0031618 | 3300035398 | Bacteria | 3211 |
| 79 | Ga0316574_0047654 | 3300035398 | Bacteria | 2661 |
| 80 | Ga0316574_0099956 | 3300035398 | Bacteria | 1856 |
| 81 | Ga0316582_0057483 | 3300036647 | Bacteria | 2485 |
| 82 | Ga0316584_0020437 | 3300036712 | Bacteria | 4801 |
| 83 | Ga0316584_0085223 | 3300036712 | Bacteria | 2366 |
| 84 | Ga0316584_0232858 | 3300036712 | Bacteria | 1350 |
| 85 | Ga0395900_0040275 | 3300037418 | Bacteria | 4815 |
| 86 | Ga0395900_0083775 | 3300037418 | Bacteria | 3276 |
| 87 | Ga0395901_0266635 | 3300038443 | Bacteria | 1782 |
| 88 | Ga0400484_00479 | 3300038725 | Bacteria | 13492 |
| 89 | Ga0400484_01468 | 3300038725 | Bacteria | 5798 |
| 90 | Ga0400484_03220 | 3300038725 | Bacteria | 3831 |
| 91 | Ga0400484_14068 | 3300038725 | Bacteria | 4154 |
| 92 | Ga0400484_18447 | 3300038725 | Bacteria | 18645 |
| 93 | Ga0400484_29885 | 3300038725 | Bacteria | 13513 |
| 94 | Ga0400490_00432 | 3300038726 | Bacteria | 19503 |
| 95 | Ga0400490_17581 | 3300038726 | Bacteria | 15443 |
| 96 | Ga0400490_22223 | 3300038726 | Bacteria | 15634 |
| 97 | Ga0400490_45281 | 3300038726 | Bacteria | 70798 |
| 98 | Ga0400491_08003 | 3300038727 | Bacteria | 15614 |
| 99 | Ga0400491_25907 | 3300038727 | Bacteria | 5380 |
| 100 | Ga0400485_06032 | 3300038735 | Bacteria | 2475 |
| 101 | Ga0400485_08828 | 3300038735 | Bacteria | 12436 |
| 102 | Ga0400485_11721 | 3300038735 | Bacteria | 4940 |
| 103 | Ga0400485_12596 | 3300038735 | Unclassified | 2767 |
| 104 | Ga0400485_14620 | 3300038735 | Bacteria | 15556 |
| 105 | Ga0400488_12122 | 3300038741 | Bacteria | 4401 |
| 106 | Ga0400488_14386 | 3300038741 | Bacteria | 10185 |
| 107 | Ga0400488_20997 | 3300038741 | Bacteria | 8292 |
| 108 | Ga0400488_39421 | 3300038741 | Bacteria | 1940 |
| 109 | Ga0400488_50497 | 3300038741 | Bacteria | 2099 |
| 110 | Ga0400486_22995 | 3300038742 | Bacteria | 12314 |
| 111 | Ga0400486_24110 | 3300038742 | Bacteria | 11703 |
| 112 | Ga0400486_24771 | 3300038742 | Bacteria | 8648 |
| 113 | Ga0400483_014908 | 3300039062 | Bacteria | 5840 |
| 114 | Ga0400483_015754 | 3300039062 | Bacteria | 1794 |
| 115 | Ga0400483_017086 | 3300039062 | Bacteria | 10456 |
| 116 | Ga0400483_031984 | 3300039062 | Bacteria | 1694 |
| 117 | Ga0400483_073372 | 3300039062 | Bacteria | 7837 |
| 118 | Ga0400483_120946 | 3300039062 | Bacteria | 1755 |
| 119 | Ga0400483_136183 | 3300039062 | Bacteria | 16988 |
| 120 | Ga0400483_151909 | 3300039062 | Bacteria | 10987 |
| 121 | Ga0400483_179289 | 3300039062 | Bacteria | 11267 |
| 122 | Ga0400483_216017 | 3300039062 | Bacteria | 9006 |
| 123 | Ga0400483_231865 | 3300039062 | Bacteria | 3199 |
| 124 | Ga0400483_253807 | 3300039062 | Bacteria | 11142 |
| 125 | Ga0400489_01018 | 3300039093 | Bacteria | 1445 |
| 126 | Ga0400489_01742 | 3300039093 | Bacteria | 1668 |
| 127 | Ga0400489_72132 | 3300039093 | Bacteria | 7980 |
| 128 | Ga0400487_10280 | 3300039110 | Bacteria | 138613 |
| 129 | Ga0400487_14655 | 3300039110 | Bacteria | 18469 |
| 130 | Ga0400487_16163 | 3300039110 | Bacteria | 5154 |
| 131 | Ga0400487_18909 | 3300039110 | Bacteria | 13007 |
| 132 | Ga0400487_21971 | 3300039110 | Bacteria | 2183 |
| 133 | Ga0400487_24147 | 3300039110 | Unclassified | 2180 |
| 134 | Ga0400487_30744 | 3300039110 | Bacteria | 1224 |
| 135 | Ga0400487_35870 | 3300039110 | Bacteria | 16516 |
| 136 | Ga0400487_43621 | 3300039110 | Bacteria | 6929 |
| 137 | Ga0400487_56360 | 3300039110 | Bacteria | 3443 |
| 138 | Ga0439464_0000655 | 3300042439 | Bacteria | 7393 |
| 139 | Ga0450901_003931 | 3300042533 | Bacteria | 1541 |
| 140 | Ga0451577_0000137 | 3300042876 | Bacteria | 163955 |
| 141 | Ga0451577_0043925 | 3300042876 | Bacteria | 4001 |
| 142 | Ga0451577_0317230 | 3300042876 | Bacteria | 1413 |
| 143 | Ga0453683_0017667 | 3300044673 | Bacteria | 4591 |
| 144 | Ga0453683_0040090 | 3300044673 | Bacteria | 2942 |
| 145 | Ga0453684_0000014 | 3300044712 | Bacteria | 993311 |
| 146 | Ga0453684_0000063 | 3300044712 | Bacteria | 486079 |
| 147 | Ga0453684_0000276 | 3300044712 | Bacteria | 222326 |
| 148 | Ga0453684_0001175 | 3300044712 | Bacteria | 81229 |
| 149 | Ga0453684_0013220 | 3300044712 | Bacteria | 13455 |
| 150 | Ga0453684_0016855 | 3300044712 | Bacteria | 11373 |
| 151 | Ga0453684_0017969 | 3300044712 | Bacteria | 10895 |
| 152 | Ga0453684_0038133 | 3300044712 | Bacteria | 6577 |
| 153 | Ga0453684_0179691 | 3300044712 | Bacteria | 2485 |
| 154 | Ga0451576_0000006 | 3300045051 | Bacteria | 949698 |
| 155 | Ga0451576_0001472 | 3300045051 | Bacteria | 39908 |
| 156 | Ga0451576_0004703 | 3300045051 | Bacteria | 17554 |
| 157 | Ga0451576_0027754 | 3300045051 | Bacteria | 6078 |
| 158 | Ga0451576_0075889 | 3300045051 | Bacteria | 3498 |
| 159 | Ga0496107_0246392 | 3300048910 | Bacteria | 1330 |
| 160 | Ga0496108_0008724 | 3300048911 | Bacteria | 8219 |
| 161 | Ga0496109_0027500 | 3300048912 | Bacteria | 5079 |
| 162 | Ga0496114_0002244 | 3300048917 | Bacteria | 14724 |
| 163 | Ga0496114_0004477 | 3300048917 | Bacteria | 10839 |
| 164 | Ga0496116_0000318 | 3300048919 | Bacteria | 79091 |
| 165 | Ga0496117_0004472 | 3300048920 | Bacteria | 15388 |
| 166 | Ga0496121_0000463 | 3300048924 | Bacteria | 79640 |
| 167 | Ga0496121_0023063 | 3300048924 | Bacteria | 6012 |
| 168 | Ga0496122_0000707 | 3300048925 | Bacteria | 65897 |
| 169 | Ga0496122_0011739 | 3300048925 | Bacteria | 8827 |
| 170 | Ga0496123_0000505 | 3300048926 | Bacteria | 67858 |
| 171 | Ga0496125_0000650 | 3300048928 | Bacteria | 58031 |
| 172 | Ga0496126_0019296 | 3300048929 | Bacteria | 6716 |
| 173 | Ga0501033_0000280 | 3300049570 | Bacteria | 49197 |
| 174 | Ga0501033_0000621 | 3300049570 | Bacteria | 32829 |
| 175 | Ga0501034_0026946 | 3300049571 | Bacteria | 5847 |
| 176 | Ga0501034_0377663 | 3300049571 | Bacteria | 1342 |
| 177 | Ga0501036_0002511 | 3300049572 | Bacteria | 14391 |
| 178 | Ga0501036_0016505 | 3300049572 | Bacteria | 6167 |
| 179 | Ga0501036_0113137 | 3300049572 | Bacteria | 2294 |
| 180 | Ga0501037_0015718 | 3300049573 | Bacteria | 5568 |
| 181 | Ga0501037_0086311 | 3300049573 | Bacteria | 2272 |
| 182 | Ga0501037_0158645 | 3300049573 | Bacteria | 1613 |
| 183 | Ga0501038_0000400 | 3300049574 | Bacteria | 37717 |
| 184 | Ga0501038_0004735 | 3300049574 | Bacteria | 12657 |
| 185 | Ga0501038_0012883 | 3300049574 | Bacteria | 7630 |
| 186 | Ga0501038_0073521 | 3300049574 | Bacteria | 2895 |
| 187 | Ga0501038_0079266 | 3300049574 | Bacteria | 2769 |
| 188 | Ga0501038_0112484 | 3300049574 | Bacteria | 2254 |
| 189 | Ga0501039_0020510 | 3300049575 | Bacteria | 5064 |
| 190 | Ga0501039_0166385 | 3300049575 | Bacteria | 1733 |
| 191 | Ga0501040_0031761 | 3300049576 | Bacteria | 3570 |
| 192 | Ga0501043_0002428 | 3300049579 | Bacteria | 15764 |
| 193 | Ga0501043_0078132 | 3300049579 | Bacteria | 2600 |
| 194 | Ga0501043_0110749 | 3300049579 | Bacteria | 2155 |
| 195 | Ga0501043_0141282 | 3300049579 | Bacteria | 1885 |
| 196 | Ga0501043_0315714 | 3300049579 | Bacteria | 1192 |
| 197 | Ga0501046_0016421 | 3300049580 | Bacteria | 6201 |
| 198 | Ga0501046_0018694 | 3300049580 | Bacteria | 5759 |
| 199 | Ga0501047_0077083 | 3300049581 | Bacteria | 3207 |
| 200 | Ga0501047_0424045 | 3300049581 | Bacteria | 1161 |
| 201 | Ga0501048_0166558 | 3300049582 | Bacteria | 1560 |
| 202 | Ga0501068_0166222 | 3300049584 | Bacteria | 1391 |
| 203 | Ga0501070_0177228 | 3300049586 | Bacteria | 1755 |
| 204 | Ga0501071_0083664 | 3300049587 | Bacteria | 2338 |
| 205 | Ga0501075_0303165 | 3300049591 | Bacteria | 1217 |
| 206 | Ga0501035_0001241 | 3300049822 | Bacteria | 26491 |
| 207 | Ga0501035_0020849 | 3300049822 | Bacteria | 6022 |
| 208 | Ga0501035_0022995 | 3300049822 | Bacteria | 5721 |
| 209 | Ga0501035_0094935 | 3300049822 | Bacteria | 2622 |
| 210 | Ga0501044_0004919 | 3300049823 | Bacteria | 14935 |
| 211 | Ga0501044_0007025 | 3300049823 | Bacteria | 12393 |
| 212 | Ga0501044_0028479 | 3300049823 | Bacteria | 5896 |
| 213 | Ga0501045_0002020 | 3300049824 | Bacteria | 13716 |
| 214 | nmdc:mga08y16_346430_c1 | 3300050511 | Bacteria | 1527 |
| 215 | Ga0500618_000602 | 3300053125 | Bacteria | 22088 |
| 216 | Ga0530510_0249862 | 3300061734 | Bacteria | 1322 |
| 217 | 2526214017 | 2526164512 | Bacteria | 4025691 |
| 218 | 2548846481 | 2547132512 | Bacteria | 3416496 |
| 219 | 2553005022 | 2551306416 | Bacteria | 6152985 |
| 220 | 2555672098 | 2554235341 | Bacteria | 6867980 |
| 221 | 2574429423 | 2574179768 | Bacteria | 4907129 |
| 222 | 2599102571 | 2597490356 | Bacteria | 7030811 |
| 223 | 2599353736 | 2599185160 | Bacteria | 6844013 |
| 224 | 2599360572 | 2599185161 | Bacteria | 6960462 |
| 225 | 2599366894 | 2599185162 | Bacteria | 6957254 |
| 226 | 2599373683 | 2599185163 | Bacteria | 6995158 |
| 227 | 2599378844 | 2599185164 | Bacteria | 6841688 |
| 228 | 2599386178 | 2599185165 | Bacteria | 6843250 |
| 229 | 2599392542 | 2599185166 | Bacteria | 6959206 |
| 230 | 2599404308 | 2599185168 | Bacteria | 6997636 |
| 231 | 2599460570 | 2599185181 | Bacteria | 6844519 |
| 232 | 2599470130 | 2599185182 | Bacteria | 6883168 |
| 233 | 2599489591 | 2599185186 | Bacteria | 6831633 |
| 234 | 2600213183 | 2599185356 | Bacteria | 6843884 |
| 235 | 2600444096 | 2600254954 | Bacteria | 5100516 |
| 236 | 2601672255 | 2600255292 | Bacteria | 6300551 |
| 237 | 2601773350 | 2600255313 | Bacteria | 6842543 |
| 238 | 2602008419 | 2600255389 | Bacteria | 5275336 |
| 239 | 2671096329 | 2667528171 | Bacteria | 6900659 |
| 240 | 2819701421 | 2818991464 | Bacteria | 6907494 |
| 241 | 2823425725 | 2823421272 | Bacteria | 5372474 |
| 242 | 2842720597 | 2842718218 | Bacteria | 4560148 |
| 243 | 2844666274 | 2844665904 | Bacteria | 6817974 |
| 244 | 2846955283 | 2846952575 | Bacteria | 6587527 |
| 245 | 2848861000 | 2848858292 | Bacteria | 7391279 |
| 246 | 2857549286 | 2857547612 | Bacteria | 6179999 |
| 247 | 2857568478 | 2857564685 | Bacteria | 6290584 |
| 248 | 2885083327 | 2885080285 | Bacteria | 6355622 |
| 249 | 2891634904 | 2891633521 | Bacteria | 4602265 |
| 250 | 2919493752 | 2919493220 | Bacteria | 4598500 |
| 251 | 2919500430 | 2919497567 | Bacteria | 4408621 |
| 252 | 2919502471 | 2919501602 | Bacteria | 5286340 |
| 253 | 2919545635 | 2919543075 | Bacteria | 4728703 |
| 254 | 2926064144 | 2926063275 | Bacteria | 5285848 |
| 255 | 2928134753 | 2928130867 | Bacteria | 5467269 |
| 256 | 2932416341 | 2932410948 | Bacteria | 6312192 |
| 257 | 2932422266 | 2932416698 | Bacteria | 6315112 |
| 258 | 2935356945 | 2935353572 | Unclassified | 6955622 |
| 259 | 2974321234 | 2974320154 | Bacteria | 4571377 |
| 260 | 2990199692 | 2990196909 | Bacteria | 4054280 |
| 261 | 637322518 | 637000220 | Bacteria | 7074893 |
| 262 | 639787717 | 639633007 | Bacteria | 4376040 |
| 263 | 8002392972 | 8002392321 | Bacteria | 4159911 |
| 264 | 8019773735 | 8019769354 | Bacteria | 6924660 |
| 265 | 8048747016 | 8048746797 | Bacteria | 3557226 |
| 266 | 8057804984 | 8057798959 | Bacteria | 6713499 |
| 267 | Ga0451576_0004283 | |||
| 268 | JGI25163J39215_1001191 | |||
| 269 | JGI25164J39214_1000322 | |||
| 270 | JGI25151J46595_10007354 | |||
| 271 | JGI25165J46597_1000293 | |||
| 272 | Ga0055526_1018639 | |||
| 273 | Ga0055524_1004049 | |||
| 274 | Ga0055524_1026885 | |||
| 275 | Ga0055536_1000026 | |||
| 276 | Ga0055534_1003051 | |||
| 277 | Ga0055540_1017352 | |||
| 278 | Ga0065704_10107449 | |||
| 279 | Ga0070714_100011485 | |||
| 280 | Ga0070662_100159103 | |||
| 281 | Ga0068855_100008682 | |||
| 282 | Ga0068855_100146900 | |||
| 283 | Ga0068854_100004286 | |||
| 284 | Ga0105243_10000135 | |||
| 285 | Ga0105237_10065634 | |||
| 286 | Ga0105249_10047413 | |||
| 287 | Ga0157371_10000479 | |||
| 288 | Ga0182008_10000092 | |||
| 289 | Ga0182008_10089530 | |||
| 290 | Ga0163161_10044994 | |||
| 291 | Ga0209760_100108 | |||
| 292 | Ga0207427_100007 | |||
| 293 | Ga0209437_100006 | |||
| 294 | Ga0209233_1000059 | |||
| 295 | Ga0209130_1027202 | |||
| 296 | Ga0209675_1000026 | |||
| 297 | Ga0209675_1001768 | |||
| 298 | Ga0209676_1000059 | |||
| 299 | Ga0209025_1000066 | |||
| 300 | Ga0209025_1000463 | |||
| 301 | Ga0209564_1000161 | |||
| 302 | Ga0209256_1000562 | |||
| 303 | Ga0209256_1001496 | |||
| 304 | Ga0209051_1009604 | |||
| 305 | Ga0209257_1007225 | |||
| 306 | Ga0207684_10064751 | |||
| 307 | Ga0207671_10001710 | |||
| 308 | Ga0207664_10001973 | |||
| 309 | Ga0207690_10138044 | |||
| 310 | Ga0207709_10000251 | |||
| 311 | Ga0207667_10000043 | |||
| 312 | Ga0207667_10111620 | |||
| 313 | Ga0207639_10272501 | |||
| 314 | Ga0207702_10136013 | |||
| 315 | Ga0207683_10290510 | |||
| 316 | Ga0307515_10007242 | |||
| 317 | Ga0265324_10032461 | |||
| 318 | Ga0265332_10000077 | |||
| 319 | Ga0265332_10036982 | |||
| 320 | Ga0265320_10004947 | |||
| 321 | Ga0265325_10001610 | |||
| 322 | Ga0307408_100000002 | |||
| 323 | Ga0316575_10021516 | |||
| 324 | Ga0316575_10053478 | |||
| 325 | Ga0316579_10019603 | |||
| 326 | Ga0316579_10067845 | |||
| 327 | Ga0316576_10022042 | |||
| 328 | Ga0316576_10170799 | |||
| 329 | Ga0316578_10061234 | |||
| 330 | Ga0316578_10067015 | |||
| 331 | Ga0307516_10005605 | |||
| 332 | Ga0316577_10021837 | |||
| 333 | Ga0316583_10001755 | |||
| 334 | Ga0316583_10005451 | |||
| 335 | Ga0316580_10027177 | |||
| 336 | Ga0316593_10054905 | |||
| 337 | Ga0316592_1018115 | |||
| 338 | Ga0316586_1005870 | |||
| 339 | Ga0316588_1026429 | |||
| 340 | Ga0316574_0001289 | |||
| 341 | Ga0316574_0002085 | |||
| 342 | Ga0316574_0009414 | |||
| 343 | Ga0316574_0015346 | |||
| 344 | Ga0316574_0031618 | |||
| 345 | Ga0316574_0047654 | |||
| 346 | Ga0316574_0099956 | |||
| 347 | Ga0316582_0057483 | |||
| 348 | Ga0316584_0020437 | |||
| 349 | Ga0316584_0085223 | |||
| 350 | Ga0316584_0232858 | |||
| 351 | Ga0395900_0040275 | |||
| 352 | Ga0395900_0083775 | |||
| 353 | Ga0395901_0266635 | |||
| 354 | Ga0400484_00479 | |||
| 355 | Ga0400484_01468 | |||
| 356 | Ga0400484_03220 | |||
| 357 | Ga0400484_14068 | |||
| 358 | Ga0400484_18447 | |||
| 359 | Ga0400484_29885 | |||
| 360 | Ga0400490_00432 | |||
| 361 | Ga0400490_17581 | |||
| 362 | Ga0400490_22223 | |||
| 363 | Ga0400490_45281 | |||
| 364 | Ga0400491_08003 | |||
| 365 | Ga0400491_25907 | |||
| 366 | Ga0400485_06032 | |||
| 367 | Ga0400485_08828 | |||
| 368 | Ga0400485_11721 | |||
| 369 | Ga0400485_12596 | |||
| 370 | Ga0400485_14620 | |||
| 371 | Ga0400488_12122 | |||
| 372 | Ga0400488_14386 | |||
| 373 | Ga0400488_20997 | |||
| 374 | Ga0400488_39421 | |||
| 375 | Ga0400488_50497 | |||
| 376 | Ga0400486_22995 | |||
| 377 | Ga0400486_24110 | |||
| 378 | Ga0400486_24771 | |||
| 379 | Ga0400483_014908 | |||
| 380 | Ga0400483_015754 | |||
| 381 | Ga0400483_017086 | |||
| 382 | Ga0400483_031984 | |||
| 383 | Ga0400483_073372 | |||
| 384 | Ga0400483_120946 | |||
| 385 | Ga0400483_136183 | |||
| 386 | Ga0400483_151909 | |||
| 387 | Ga0400483_179289 | |||
| 388 | Ga0400483_216017 | |||
| 389 | Ga0400483_231865 | |||
| 390 | Ga0400483_253807 | |||
| 391 | Ga0400489_01018 | |||
| 392 | Ga0400489_01742 | |||
| 393 | Ga0400489_72132 | |||
| 394 | Ga0400487_10280 | |||
| 395 | Ga0400487_14655 | |||
| 396 | Ga0400487_16163 | |||
| 397 | Ga0400487_18909 | |||
| 398 | Ga0400487_21971 | |||
| 399 | Ga0400487_24147 | |||
| 400 | Ga0400487_30744 | |||
| 401 | Ga0400487_35870 | |||
| 402 | Ga0400487_43621 | |||
| 403 | Ga0400487_56360 | |||
| 404 | Ga0439464_0000655 | |||
| 405 | Ga0450901_003931 | |||
| 406 | Ga0451577_0000137 | |||
| 407 | Ga0451577_0043925 | |||
| 408 | Ga0451577_0317230 | |||
| 409 | Ga0453683_0017667 | |||
| 410 | Ga0453683_0040090 | |||
| 411 | Ga0453684_0000014 | |||
| 412 | Ga0453684_0000063 | |||
| 413 | Ga0453684_0000276 | |||
| 414 | Ga0453684_0001175 | |||
| 415 | Ga0453684_0013220 | |||
| 416 | Ga0453684_0016855 | |||
| 417 | Ga0453684_0017969 | |||
| 418 | Ga0453684_0038133 | |||
| 419 | Ga0453684_0179691 | |||
| 420 | Ga0451576_0000006 | |||
| 421 | Ga0451576_0001472 | |||
| 422 | Ga0451576_0004703 | |||
| 423 | Ga0451576_0027754 | |||
| 424 | Ga0451576_0075889 | |||
| 425 | Ga0496107_0246392 | |||
| 426 | Ga0496108_0008724 | |||
| 427 | Ga0496109_0027500 | |||
| 428 | Ga0496114_0002244 | |||
| 429 | Ga0496114_0004477 | |||
| 430 | Ga0496116_0000318 | |||
| 431 | Ga0496117_0004472 | |||
| 432 | Ga0496121_0000463 | |||
| 433 | Ga0496121_0023063 | |||
| 434 | Ga0496122_0000707 | |||
| 435 | Ga0496122_0011739 | |||
| 436 | Ga0496123_0000505 | |||
| 437 | Ga0496125_0000650 | |||
| 438 | Ga0496126_0019296 | |||
| 439 | Ga0501033_0000280 | |||
| 440 | Ga0501033_0000621 | |||
| 441 | Ga0501034_0026946 | |||
| 442 | Ga0501034_0377663 | |||
| 443 | Ga0501036_0002511 | |||
| 444 | Ga0501036_0016505 | |||
| 445 | Ga0501036_0113137 | |||
| 446 | Ga0501037_0015718 | |||
| 447 | Ga0501037_0086311 | |||
| 448 | Ga0501037_0158645 | |||
| 449 | Ga0501038_0000400 | |||
| 450 | Ga0501038_0004735 | |||
| 451 | Ga0501038_0012883 | |||
| 452 | Ga0501038_0073521 | |||
| 453 | Ga0501038_0079266 | |||
| 454 | Ga0501038_0112484 | |||
| 455 | Ga0501039_0020510 | |||
| 456 | Ga0501039_0166385 | |||
| 457 | Ga0501040_0031761 | |||
| 458 | Ga0501043_0002428 | |||
| 459 | Ga0501043_0078132 | |||
| 460 | Ga0501043_0110749 | |||
| 461 | Ga0501043_0141282 | |||
| 462 | Ga0501043_0315714 | |||
| 463 | Ga0501046_0016421 | |||
| 464 | Ga0501046_0018694 | |||
| 465 | Ga0501047_0077083 | |||
| 466 | Ga0501047_0424045 | |||
| 467 | Ga0501048_0166558 | |||
| 468 | Ga0501068_0166222 | |||
| 469 | Ga0501070_0177228 | |||
| 470 | Ga0501071_0083664 | |||
| 471 | Ga0501075_0303165 | |||
| 472 | Ga0501035_0001241 | |||
| 473 | Ga0501035_0020849 | |||
| 474 | Ga0501035_0022995 | |||
| 475 | Ga0501035_0094935 | |||
| 476 | Ga0501044_0004919 | |||
| 477 | Ga0501044_0007025 | |||
| 478 | Ga0501044_0028479 | |||
| 479 | Ga0501045_0002020 | |||
| 480 | nmdc:mga08y16_346430_c1 | |||
| 481 | Ga0500618_000602 | |||
| 482 | Ga0530510_0249862 | |||
| 483 | 2526214017 | |||
| 484 | 2548846481 | |||
| 485 | 2553005022 | |||
| 486 | 2555672098 | |||
| 487 | 2574429423 | |||
| 488 | 2599102571 | |||
| 489 | 2599353736 | |||
| 490 | 2599360572 | |||
| 491 | 2599366894 | |||
| 492 | 2599373683 | |||
| 493 | 2599378844 | |||
| 494 | 2599386178 | |||
| 495 | 2599392542 | |||
| 496 | 2599404308 | |||
| 497 | 2599460570 | |||
| 498 | 2599470130 | |||
| 499 | 2599489591 | |||
| 500 | 2600213183 | |||
| 501 | 2600444096 | |||
| 502 | 2601672255 | |||
| 503 | 2601773350 | |||
| 504 | 2602008419 | |||
| 505 | 2671096329 | |||
| 506 | 2819701421 | |||
| 507 | 2823425725 | |||
| 508 | 2842720597 | |||
| 509 | 2844666274 | |||
| 510 | 2846955283 | |||
| 511 | 2848861000 | |||
| 512 | 2857549286 | |||
| 513 | 2857568478 | |||
| 514 | 2885083327 | |||
| 515 | 2891634904 | |||
| 516 | 2919493752 | |||
| 517 | 2919500430 | |||
| 518 | 2919502471 | |||
| 519 | 2919545635 | |||
| 520 | 2926064144 | |||
| 521 | 2928134753 | |||
| 522 | 2932416341 | |||
| 523 | 2932422266 | |||
| 524 | 2935356945 | |||
| 525 | 2974321234 | |||
| 526 | 2990199692 | |||
| 527 | 637322518 | |||
| 528 | 639787717 | |||
| 529 | 8002392972 | |||
| 530 | 8019773735 | |||
| 531 | 8048747016 | |||
| 532 | 8057804984 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 3o5c-assembly2.cif.gz_D | cytochrome c peroxidase bccp of shewanella oneidensis | 0.9732 | 25 | 330 |
| 3o5c-assembly2.cif.gz_C | cytochrome c peroxidase bccp of shewanella oneidensis | 0.9725 | 25 | 329 |
| 3o5c-assembly2.cif.gz_C | cytochrome c peroxidase bccp of shewanella oneidensis | 0.9694 | 25 | 329 |
| 1iqc-assembly2.cif.gz_D | crystal structure of di-heme peroxidase from nitrosomonas europaea | 0.9677 | 25 | 330 |
| 3o5c-assembly2.cif.gz_D | cytochrome c peroxidase bccp of shewanella oneidensis | 0.967 | 25 | 330 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 3o5cC01 | Mainly Alpha;Orthogonal Bundle;Cytochrome Bc1 Complex; Chain D, domain 2;Cytochrome c-like domain | 0.9765 | 185 | 324 | 1.10.760.10 |
| 6fu3B01 | Mainly Alpha;Orthogonal Bundle;Cytochrome Bc1 Complex; Chain D, domain 2;Cytochrome c-like domain | 0.943 | 174 | 307 | 1.10.760.10 |
| 3o5cD02 | Mainly Alpha;Orthogonal Bundle;Cytochrome Bc1 Complex; Chain D, domain 2;Cytochrome c-like domain | 0.9292 | 40 | 187 | 1.10.760.10 |
| 3o5cC01 | Mainly Alpha;Orthogonal Bundle;Cytochrome Bc1 Complex; Chain D, domain 2;Cytochrome c-like domain | 0.8999 | 185 | 324 | 1.10.760.10 |
| 6fu3B02 | Mainly Alpha;Orthogonal Bundle;Cytochrome Bc1 Complex; Chain D, domain 2;Cytochrome c-like domain | 0.8985 | 37 | 170 | 1.10.760.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A259MMM8-F1-model_v4 | Cytochrome C biogenesis protein CcsA | 0.9926 | 132 | 330 |
GO:0004130
GO:0009055 GO:0020037 GO:0046872 |
| AF-A0A4Q3M9S2-F1-model_v4 | C-type cytochrome | 0.9907 | 165 | 330 |
GO:0004130
GO:0009055 GO:0020037 GO:0046872 |
| AF-A0A259MMM8-F1-model_v4 | Cytochrome C biogenesis protein CcsA | 0.9877 | 132 | 330 |
GO:0004130
GO:0009055 GO:0020037 GO:0046872 |
| AF-A0A1S2N6I5-F1-model_v4 | Cytochrome c family protein | 0.985 | 195 | 330 |
GO:0004130
GO:0009055 GO:0020037 GO:0046872 |
| AF-A0A4Q3M9S2-F1-model_v4 | C-type cytochrome | 0.9848 | 165 | 330 |
GO:0004130
GO:0009055 GO:0020037 GO:0046872 |