F374484

General Info

Members Datasets Scaffolds Average Seq Length
267 177 534 506

Family's Representative Sequence

Representative Sequence 3300003578|Ga0006562J51391_1129338|Ga0006562J51391_11293382
Length 538
Sequence MVARVVTVAFDGVEARRVDVEVQLIGADGPTIFNIVGLPDKAVAESKERVRGAFAGIGLALPAKRIIANLAPADLPKEGSHFDLPIALALMAAMGVIAPDALDGWAAIGELGLDGQIARVGGALPAAVAADAMGLGLICPEATGPEAAWAGGARILAPRSLISLVNHFKGTQVLRAPEPGPLADGKAVPDLREVKGQESAKRALEIAAAGGHNLLFIGPPGSGKSMMAQRLPGLLPPLTSQELLETSMVWSVAGLIERGALTRNRPFRSPHHSASMAALTGGGLRAKPGEASLAHNGVLFLDELPEYSAQALDSLRAPLETGEIVVARANAHIRYPARFQLVAAMNPCRCGMGGAGRGACGKAPRCQRDYQNRVSGPMFDRIDLTVETPPVTAADMALPPPAEGTAEARARVATARAMQEDRVREAGLDAAQGLNARASGATLDRFATPDEAGRMLLMRAGEAGGLTARGWTRTLRLARTIADLEGSTGVLRRHIAEALIYRRTTIGAEADFDRRVAQRHEGFGLREGDDEQTPFLHA

Samples

Sample ID Description Type Environment
1 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
2 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
3 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
4 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
5 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
6 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
12 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
13 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
14 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
15 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
16 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
17 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
18 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
19 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
20 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
21 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
22 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
23 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
24 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
25 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
26 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
27 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
28 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
29 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
30 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
31 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
32 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
33 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
34 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
35 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
36 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
37 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
38 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
39 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
40 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
41 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
42 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
43 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
44 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
45 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
46 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
47 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
48 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
49 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
76 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
77 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
78 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
79 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
80 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
81 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
82 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
83 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
84 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
85 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
86 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
87 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
88 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
89 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
90 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
91 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
92 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
93 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
94 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
95 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
96 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
97 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
98 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
99 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
100 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
101 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
102 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
103 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
104 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
105 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
106 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
107 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
108 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
109 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
110 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
111 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
112 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
113 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
114 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
115 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
116 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
117 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
118 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
119 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
120 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
121 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
122 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
123 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
124 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
125 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
126 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
127 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
134 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
135 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
136 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
137 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
139 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
140 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
141 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
142 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
143 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
144 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
145 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
146 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
147 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
148 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
149 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
150 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
151 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
152 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
153 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
154 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
155 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
156 2582581279 Caulobacter henricii OK261 Isolate Rhizosphere
157 2582581280 Caulobacter henricii CF287 Isolate Rhizosphere
158 2582581293 Caulobacter henricii YR570 Isolate Rhizosphere
159 2585428106 Caulobacter sp. OV484 Isolate Rhizosphere
160 2643221545 Caulobacter sp. Root1455 Isolate Unclassified
161 2643221574 Brevundimonas sp. Root608 Isolate Unclassified
162 2643221583 Caulobacter sp. Root655 Isolate Unclassified
163 2643221640 Caulobacter sp. Root342 Isolate Unclassified
164 2643221642 Caulobacter sp. Root343 Isolate Unclassified
165 2643221663 Brevundimonas sp. Root1279 Isolate Unclassified
166 2643221691 Caulobacter sp. Root487D2Y Isolate Unclassified
167 2643221699 Brevundimonas sp. Root1423 Isolate Unclassified
168 2818991435 Caulobacter henricii 536 Isolate Unclassified
169 2818991454 Caulobacter rhizosphaerae 3260 Isolate Rhizosphere
170 2849573788 Caulobacter endophyticus 774 Isolate Unclassified
171 2857504554 Caulobacter sp. R-72291 Isolate Unclassified
172 2884960567 Caulobacter sp. 602-1 Isolate Rhizosphere
173 2898329390 Caulobacter sp. 602-2 Isolate Rhizosphere
174 2928531327 Caulobacter sp. 1776 Isolate Rhizosphere
175 2928972540 Brevundimonas sp. 1080 Isolate Rhizosphere
176 2941485952 Brevundimonas faecalis 2814 Isolate Rhizosphere
177 2977240413 Brevundimonas vesicularis SORGH_AS 431 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 90.64
Metatranscriptomes 0.75
Isolates 8.61

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 18.35
Nodule 0
Rhizoplane 1.5
Rhizosphere 69.66
Stem 0
Stem Tuber 0
Unclassified 0.37

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0006562J51391_1129338 3300003578 Bacteria 7910
2 Ga0006562J51391_1129339 3300003578 Bacteria 5070
3 Ga0055536_1000815 3300003781 Bacteria 20611
4 Ga0055536_1000953 3300003781 Bacteria 18523
5 Ga0055530_10001790 3300003791 Bacteria 14930
6 Ga0055530_10002430 3300003791 Bacteria 12047
7 Ga0055530_10007432 3300003791 Bacteria 4613
8 Ga0055531_10000541 3300003794 Bacteria 33459
9 Ga0055531_10001198 3300003794 Bacteria 19883
10 Ga0055531_10004973 3300003794 Bacteria 7890
11 Ga0065165_1000856 3300005262 Bacteria 39851
12 Ga0065165_1006927 3300005262 Bacteria 5750
13 Ga0070676_10019683 3300005328 Bacteria 3760
14 Ga0068869_100007125 3300005334 Bacteria 7123
15 Ga0070666_10029465 3300005335 Bacteria 3609
16 Ga0070668_100000279 3300005347 Bacteria 33807
17 Ga0070668_100017898 3300005347 Bacteria 5317
18 Ga0070668_100028777 3300005347 Bacteria 4216
19 Ga0070668_100042038 3300005347 Bacteria 3502
20 Ga0070675_100013144 3300005354 Bacteria 6504
21 Ga0070673_100083243 3300005364 Bacteria 2599
22 Ga0070667_100000175 3300005367 Bacteria 79433
23 Ga0070709_10000179 3300005434 Bacteria 40240
24 Ga0070713_100000011 3300005436 Bacteria 146314
25 Ga0070711_100003251 3300005439 Bacteria 9445
26 Ga0070711_100010987 3300005439 Bacteria 5613
27 Ga0070665_100000198 3300005548 Bacteria 105999
28 Ga0070665_100000738 3300005548 Bacteria 43554
29 Ga0070665_100022385 3300005548 Bacteria 6360
30 Ga0068855_100086266 3300005563 Unclassified 3630
31 Ga0068855_100205466 3300005563 Bacteria 2216
32 Ga0068856_100006881 3300005614 Bacteria 11121
33 Ga0068864_100000082 3300005618 Bacteria 101182
34 Ga0068864_100000106 3300005618 Bacteria 81202
35 Ga0068863_100000175 3300005841 Bacteria 67772
36 Ga0068858_100000006 3300005842 Bacteria 256011
37 Ga0068860_100000077 3300005843 Bacteria 171297
38 Ga0068862_100000183 3300005844 Bacteria 68758
39 Ga0068862_100006751 3300005844 Bacteria 9515
40 Ga0068862_100033342 3300005844 Bacteria 4352
41 Ga0070712_100000023 3300006175 Bacteria 80972
42 Ga0075369_10004839 3300006186 Bacteria 5010
43 Ga0068871_100026882 3300006358 Bacteria 4495
44 Ga0105247_10023098 3300009101 Bacteria 3745
45 Ga0105237_10177766 3300009545 Bacteria 2128
46 Ga0105249_10000838 3300009553 Bacteria 27558
47 Ga0105249_10140376 3300009553 Bacteria 2316
48 Ga0105239_10020907 3300010375 Bacteria 7221
49 Ga0157371_10020699 3300013102 Bacteria 4839
50 Ga0157370_10011135 3300013104 Bacteria 9428
51 Ga0157369_10001803 3300013105 Bacteria 25905
52 Ga0157369_10005767 3300013105 Bacteria 14395
53 Ga0157378_10084715 3300013297 Bacteria 2870
54 Ga0157372_10009368 3300013307 Bacteria 10420
55 Ga0157379_10004479 3300014968 Bacteria 11977
56 Ga0157379_10008514 3300014968 Bacteria 8925
57 Ga0157379_10074279 3300014968 Bacteria 3044
58 Ga0213874_10002601 3300021377 Bacteria 3907
59 Ga0213876_10000349 3300021384 Bacteria 39867
60 Ga0209455_1007487 3300025272 Bacteria 3076
61 Ga0209673_1001673 3300025273 Bacteria 18950
62 Ga0209675_1014005 3300025291 Bacteria 2466
63 Ga0209676_1000115 3300025292 Bacteria 205183
64 Ga0209676_1000169 3300025292 Bacteria 155600
65 Ga0209676_1000319 3300025292 Bacteria 93542
66 Ga0209676_1003203 3300025292 Bacteria 10363
67 Ga0209564_1008231 3300025295 Bacteria 5198
68 Ga0209758_1000008 3300025297 Bacteria 1215263
69 Ga0209758_1001260 3300025297 Bacteria 31379
70 Ga0209758_1003424 3300025297 Bacteria 14459
71 Ga0209050_1000073 3300025298 Bacteria 292046
72 Ga0209050_1000281 3300025298 Bacteria 108751
73 Ga0209050_1000722 3300025298 Bacteria 48344
74 Ga0209050_1003368 3300025298 Bacteria 11901
75 Ga0209050_1026911 3300025298 Bacteria 1910
76 Ga0209256_1006304 3300025299 Bacteria 6351
77 Ga0209256_1014559 3300025299 Bacteria 2820
78 Ga0209051_1001156 3300025303 Bacteria 23987
79 Ga0209257_1000090 3300025304 Bacteria 274746
80 Ga0209257_1000099 3300025304 Bacteria 255304
81 Ga0209257_1000352 3300025304 Bacteria 94530
82 Ga0209257_1000845 3300025304 Bacteria 43868
83 Ga0209257_1002773 3300025304 Bacteria 16545
84 Ga0209257_1005093 3300025304 Bacteria 9539
85 Ga0207680_10031832 3300025903 Bacteria 2992
86 Ga0207699_10000683 3300025906 Bacteria 16279
87 Ga0207695_10005125 3300025913 Bacteria 17546
88 Ga0207671_10033445 3300025914 Bacteria 3825
89 Ga0207693_10000018 3300025915 Bacteria 138365
90 Ga0207663_10003793 3300025916 Bacteria 7457
91 Ga0207663_10020009 3300025916 Bacteria 3784
92 Ga0207650_10000033 3300025925 Bacteria 226809
93 Ga0207706_10101482 3300025933 Bacteria 2532
94 Ga0207706_10106852 3300025933 Bacteria 2463
95 Ga0207709_10003008 3300025935 Bacteria 10250
96 Ga0207691_10097431 3300025940 Bacteria 2629
97 Ga0207689_10008135 3300025942 Bacteria 9147
98 Ga0207667_10027070 3300025949 Bacteria 6252
99 Ga0207667_10032558 3300025949 Bacteria 5616
100 Ga0207667_10157808 3300025949 Bacteria 2334
101 Ga0207651_10032882 3300025960 Bacteria 3337
102 Ga0207712_10000651 3300025961 Bacteria 27001
103 Ga0207668_10000004 3300025972 Bacteria 201204
104 Ga0207668_10000217 3300025972 Bacteria 38890
105 Ga0207668_10000351 3300025972 Bacteria 29942
106 Ga0207668_10031107 3300025972 Bacteria 3512
107 Ga0207658_10000229 3300025986 Bacteria 58984
108 Ga0207703_10000027 3300026035 Bacteria 209608
109 Ga0207703_10002832 3300026035 Bacteria 14801
110 Ga0207678_10164139 3300026067 Bacteria 1897
111 Ga0207702_10102847 3300026078 Bacteria 2526
112 Ga0207641_10000003 3300026088 Bacteria 496984
113 Ga0207648_10003980 3300026089 Bacteria 15344
114 Ga0207676_10000068 3300026095 Bacteria 104705
115 Ga0207676_10000087 3300026095 Bacteria 85293
116 Ga0207674_10139189 3300026116 Bacteria 2388
117 Ga0268266_10021653 3300028379 Bacteria 5478
118 Ga0268266_10025004 3300028379 Bacteria 5083
119 Ga0268266_10056921 3300028379 Bacteria 3363
120 Ga0268265_10000500 3300028380 Bacteria 40586
121 Ga0268265_10001214 3300028380 Bacteria 22398
122 Ga0268264_10000032 3300028381 Bacteria 408337
123 Ga0307515_10087255 3300028794 Bacteria 3964
124 Ga0307515_10140456 3300028794 Bacteria 2594
125 Ga0265338_10042685 3300028800 Bacteria 4219
126 Ga0265338_10043188 3300028800 Bacteria 4184
127 Ga0265338_10046742 3300028800 Bacteria 3963
128 Ga0265331_10000008 3300031250 Bacteria 324311
129 Ga0265331_10000009 3300031250 Bacteria 314950
130 Ga0265331_10012582 3300031250 Bacteria 4576
131 Ga0265327_10000036 3300031251 Bacteria 312827
132 Ga0265327_10001057 3300031251 Bacteria 38486
133 Ga0265313_10000942 3300031595 Bacteria 28866
134 Ga0265314_10011940 3300031711 Bacteria 7128
135 Ga0265314_10020920 3300031711 Bacteria 5043
136 Ga0265314_10022319 3300031711 Bacteria 4850
137 Ga0265314_10072394 3300031711 Bacteria 2302
138 Ga0265342_10042359 3300031712 Bacteria 2751
139 Ga0307406_10006454 3300031901 Bacteria 6473
140 Ga0307412_10000905 3300031911 Bacteria 17039
141 Ga0307414_10010101 3300032004 Bacteria 5459
142 Ga0307414_10019316 3300032004 Bacteria 4219
143 Ga0307510_10088312 3300033180 Bacteria 2960
144 Ga0373955_0014101 3300035172 Bacteria 3881
145 Ga0373935_0034603 3300035692 Bacteria 3150
146 Ga0373933_0115122 3300035724 Bacteria 1680
147 Ga0373937_0031574 3300036401 Bacteria 4801
148 Ga0436365_0298223 3300039437 Bacteria 74249
149 Ga0436365_1919299 3300039437 Bacteria 34118
150 Ga0436361_0242437 3300039447 Bacteria 31293
151 Ga0436363_1077346 3300039450 Bacteria 6566
152 Ga0466959_0024136 3300045049 Bacteria 4502
153 Ga0495627_001092 3300046453 Bacteria 17716
154 Ga0495590_0000442 3300046457 Bacteria 20633
155 Ga0495638_0000403 3300046460 Bacteria 52881
156 Ga0495638_0000688 3300046460 Bacteria 36751
157 Ga0495638_0001416 3300046460 Bacteria 21777
158 Ga0495638_0004145 3300046460 Bacteria 11065
159 Ga0495650_0000207 3300046471 Bacteria 127568
160 Ga0495650_0006959 3300046471 Bacteria 6917
161 Ga0495583_0000025 3300046506 Bacteria 263775
162 Ga0495606_0001200 3300046507 Bacteria 36440
163 Ga0495610_0000507 3300046512 Bacteria 39719
164 Ga0495610_0002440 3300046512 Bacteria 15640
165 Ga0495610_0038742 3300046512 Bacteria 2417
166 Ga0495616_0000458 3300046513 Bacteria 31083
167 Ga0495631_0001467 3300046518 Bacteria 14308
168 Ga0495637_0011285 3300046520 Bacteria 4296
169 Ga0495648_0000039 3300046524 Bacteria 185430
170 Ga0495654_0000016 3300046530 Bacteria 306416
171 Ga0495597_0044676 3300046542 Bacteria 1969
172 Ga0495645_0030040 3300046543 Bacteria 3958
173 Ga0495633_0000655 3300046558 Bacteria 31997
174 Ga0495668_0014296 3300046616 Bacteria 4658
175 Ga0495668_0035031 3300046616 Bacteria 2814
176 Ga0495634_0071798 3300046642 Bacteria 2278
177 Ga0495649_0000048 3300046694 Bacteria 118180
178 Ga0495660_0044725 3300046810 Bacteria 2434
179 Ga0495674_0134412 3300047319 Bacteria 2082
180 Ga0495672_0004131 3300047320 Bacteria 12071
181 Ga0495679_018364 3300047446 Bacteria 2484
182 Ga0495673_0000340 3300047469 Bacteria 59502
183 Ga0495673_0001397 3300047469 Bacteria 19412
184 Ga0495681_0059979 3300047470 Bacteria 1757
185 Ga0495686_0001955 3300047472 Bacteria 20498
186 Ga0495686_0003239 3300047472 Bacteria 14292
187 Ga0495686_0009766 3300047472 Bacteria 6887
188 Ga0495602_0078476 3300048088 Bacteria 2789
189 Ga0496106_0026727 3300048909 Bacteria 4298
190 Ga0496106_0084101 3300048909 Bacteria 2448
191 Ga0496107_0000683 3300048910 Bacteria 19251
192 Ga0496107_0057851 3300048910 Bacteria 2803
193 Ga0496121_0000987 3300048924 Bacteria 50954
194 Ga0496121_0002840 3300048924 Bacteria 25549
195 Ga0496122_0015929 3300048925 Bacteria 7154
196 Ga0496123_0003003 3300048926 Bacteria 19495
197 Ga0496126_0000653 3300048929 Bacteria 64292
198 Ga0495678_001710 3300049459 Bacteria 16479
199 Ga0501033_0001954 3300049570 Bacteria 17937
200 Ga0501033_0022534 3300049570 Bacteria 4752
201 Ga0501033_0034877 3300049570 Bacteria 3771
202 Ga0501033_0057100 3300049570 Bacteria 2885
203 Ga0501033_0169575 3300049570 Bacteria 1568
204 Ga0501034_0012688 3300049571 Bacteria 8694
205 Ga0501037_0006250 3300049573 Bacteria 8708
206 Ga0501038_0076274 3300049574 Bacteria 2832
207 Ga0501046_0010634 3300049580 Bacteria 7894
208 Ga0501046_0010810 3300049580 Bacteria 7824
209 Ga0501047_0000872 3300049581 Bacteria 30782
210 Ga0501047_0000953 3300049581 Bacteria 29310
211 Ga0501047_0016086 3300049581 Bacteria 7135
212 Ga0501047_0082206 3300049581 Bacteria 3096
213 Ga0501047_0123904 3300049581 Bacteria 2465
214 Ga0501047_0138920 3300049581 Bacteria 2309
215 Ga0501067_0005202 3300049583 Bacteria 7229
216 Ga0501068_0059086 3300049584 Bacteria 2328
217 Ga0501072_0005454 3300049588 Bacteria 9688
218 Ga0501073_0005344 3300049589 Bacteria 9628
219 Ga0501035_0036513 3300049822 Bacteria 4453
220 Ga0501035_0062181 3300049822 Bacteria 3322
221 Ga0501035_0202812 3300049822 Bacteria 1700
222 Ga0501044_0005483 3300049823 Bacteria 14095
223 Ga0501044_0047120 3300049823 Bacteria 4459
224 Ga0501044_0053033 3300049823 Bacteria 4174
225 Ga0501044_0055537 3300049823 Bacteria 4067
226 nmdc:mga06r32_54336_c1 3300050510 Bacteria 3840
227 nmdc:mga08y16_98886_c1 3300050511 Bacteria 3038
228 nmdc:mga0n895_51673_c1 3300050512 Bacteria 4032
229 nmdc:mga0rr50_53093_c1 3300050513 Bacteria 3014
230 nmdc:mga08x19_55068_c1 3300050514 Bacteria 2562
231 nmdc:mga0sz30_9509_c1 3300050516 Bacteria 3702
232 Ga0500578_0000041 3300053086 Bacteria 129580
233 Ga0500641_0002501 3300053096 Bacteria 6496
234 Ga0500556_0000877 3300053104 Bacteria 16912
235 Ga0500618_000022 3300053125 Bacteria 157907
236 Ga0500658_0007511 3300053134 Bacteria 4028
237 Ga0500559_0000004 3300053136 Bacteria 241551
238 Ga0500559_0000806 3300053136 Bacteria 20467
239 Ga0500564_000405 3300053138 Bacteria 12408
240 Ga0500616_0024975 3300053153 Bacteria 3316
241 Ga0500622_0003408 3300053156 Bacteria 10679
242 Ga0500645_004080 3300053730 Bacteria 5721
243 Ga0500645_021751 3300053730 Bacteria 1977
244 Ga0501082_0087436 3300060353 Bacteria 2689
245 2585150154 2582581279 Bacteria 4980720
246 2585154623 2582581280 Bacteria 5994497
247 2585194769 2582581293 Bacteria 5907401
248 2587919809 2585428106 Bacteria 5179711
249 2643750478 2643221545 Bacteria 5083237
250 2643884630 2643221574 Bacteria 2789653
251 2643922686 2643221583 Bacteria 5218014
252 2644223563 2643221640 Bacteria 5258820
253 2644236347 2643221642 Bacteria 5357871
254 2644351470 2643221663 Bacteria 3425771
255 2644507368 2643221691 Bacteria 5093099
256 2644548981 2643221699 Bacteria 5731501
257 2644553286 2643221699 Bacteria 5731501
258 2819538369 2818991435 Bacteria 5433759
259 2819648186 2818991454 Bacteria 5563326
260 2849574897 2849573788 Bacteria 5421256
261 2857505944 2857504554 Bacteria 5369913
262 2884963704 2884960567 Bacteria 5437054
263 2898330577 2898329390 Bacteria 5168154
264 2928531951 2928531327 Bacteria 5101314
265 2928973555 2928972540 Bacteria 3058286
266 2941488134 2941485952 Bacteria 3591484
267 2977240453 2977240413 Bacteria 3191065
268 Ga0006562J51391_1129338
269 Ga0006562J51391_1129339
270 Ga0055536_1000815
271 Ga0055536_1000953
272 Ga0055530_10001790
273 Ga0055530_10002430
274 Ga0055530_10007432
275 Ga0055531_10000541
276 Ga0055531_10001198
277 Ga0055531_10004973
278 Ga0065165_1000856
279 Ga0065165_1006927
280 Ga0070676_10019683
281 Ga0068869_100007125
282 Ga0070666_10029465
283 Ga0070668_100000279
284 Ga0070668_100017898
285 Ga0070668_100028777
286 Ga0070668_100042038
287 Ga0070675_100013144
288 Ga0070673_100083243
289 Ga0070667_100000175
290 Ga0070709_10000179
291 Ga0070713_100000011
292 Ga0070711_100003251
293 Ga0070711_100010987
294 Ga0070665_100000198
295 Ga0070665_100000738
296 Ga0070665_100022385
297 Ga0068855_100086266
298 Ga0068855_100205466
299 Ga0068856_100006881
300 Ga0068864_100000082
301 Ga0068864_100000106
302 Ga0068863_100000175
303 Ga0068858_100000006
304 Ga0068860_100000077
305 Ga0068862_100000183
306 Ga0068862_100006751
307 Ga0068862_100033342
308 Ga0070712_100000023
309 Ga0075369_10004839
310 Ga0068871_100026882
311 Ga0105247_10023098
312 Ga0105237_10177766
313 Ga0105249_10000838
314 Ga0105249_10140376
315 Ga0105239_10020907
316 Ga0157371_10020699
317 Ga0157370_10011135
318 Ga0157369_10001803
319 Ga0157369_10005767
320 Ga0157378_10084715
321 Ga0157372_10009368
322 Ga0157379_10004479
323 Ga0157379_10008514
324 Ga0157379_10074279
325 Ga0213874_10002601
326 Ga0213876_10000349
327 Ga0209455_1007487
328 Ga0209673_1001673
329 Ga0209675_1014005
330 Ga0209676_1000115
331 Ga0209676_1000169
332 Ga0209676_1000319
333 Ga0209676_1003203
334 Ga0209564_1008231
335 Ga0209758_1000008
336 Ga0209758_1001260
337 Ga0209758_1003424
338 Ga0209050_1000073
339 Ga0209050_1000281
340 Ga0209050_1000722
341 Ga0209050_1003368
342 Ga0209050_1026911
343 Ga0209256_1006304
344 Ga0209256_1014559
345 Ga0209051_1001156
346 Ga0209257_1000090
347 Ga0209257_1000099
348 Ga0209257_1000352
349 Ga0209257_1000845
350 Ga0209257_1002773
351 Ga0209257_1005093
352 Ga0207680_10031832
353 Ga0207699_10000683
354 Ga0207695_10005125
355 Ga0207671_10033445
356 Ga0207693_10000018
357 Ga0207663_10003793
358 Ga0207663_10020009
359 Ga0207650_10000033
360 Ga0207706_10101482
361 Ga0207706_10106852
362 Ga0207709_10003008
363 Ga0207691_10097431
364 Ga0207689_10008135
365 Ga0207667_10027070
366 Ga0207667_10032558
367 Ga0207667_10157808
368 Ga0207651_10032882
369 Ga0207712_10000651
370 Ga0207668_10000004
371 Ga0207668_10000217
372 Ga0207668_10000351
373 Ga0207668_10031107
374 Ga0207658_10000229
375 Ga0207703_10000027
376 Ga0207703_10002832
377 Ga0207678_10164139
378 Ga0207702_10102847
379 Ga0207641_10000003
380 Ga0207648_10003980
381 Ga0207676_10000068
382 Ga0207676_10000087
383 Ga0207674_10139189
384 Ga0268266_10021653
385 Ga0268266_10025004
386 Ga0268266_10056921
387 Ga0268265_10000500
388 Ga0268265_10001214
389 Ga0268264_10000032
390 Ga0307515_10087255
391 Ga0307515_10140456
392 Ga0265338_10042685
393 Ga0265338_10043188
394 Ga0265338_10046742
395 Ga0265331_10000008
396 Ga0265331_10000009
397 Ga0265331_10012582
398 Ga0265327_10000036
399 Ga0265327_10001057
400 Ga0265313_10000942
401 Ga0265314_10011940
402 Ga0265314_10020920
403 Ga0265314_10022319
404 Ga0265314_10072394
405 Ga0265342_10042359
406 Ga0307406_10006454
407 Ga0307412_10000905
408 Ga0307414_10010101
409 Ga0307414_10019316
410 Ga0307510_10088312
411 Ga0373955_0014101
412 Ga0373935_0034603
413 Ga0373933_0115122
414 Ga0373937_0031574
415 Ga0436365_0298223
416 Ga0436365_1919299
417 Ga0436361_0242437
418 Ga0436363_1077346
419 Ga0466959_0024136
420 Ga0495627_001092
421 Ga0495590_0000442
422 Ga0495638_0000403
423 Ga0495638_0000688
424 Ga0495638_0001416
425 Ga0495638_0004145
426 Ga0495650_0000207
427 Ga0495650_0006959
428 Ga0495583_0000025
429 Ga0495606_0001200
430 Ga0495610_0000507
431 Ga0495610_0002440
432 Ga0495610_0038742
433 Ga0495616_0000458
434 Ga0495631_0001467
435 Ga0495637_0011285
436 Ga0495648_0000039
437 Ga0495654_0000016
438 Ga0495597_0044676
439 Ga0495645_0030040
440 Ga0495633_0000655
441 Ga0495668_0014296
442 Ga0495668_0035031
443 Ga0495634_0071798
444 Ga0495649_0000048
445 Ga0495660_0044725
446 Ga0495674_0134412
447 Ga0495672_0004131
448 Ga0495679_018364
449 Ga0495673_0000340
450 Ga0495673_0001397
451 Ga0495681_0059979
452 Ga0495686_0001955
453 Ga0495686_0003239
454 Ga0495686_0009766
455 Ga0495602_0078476
456 Ga0496106_0026727
457 Ga0496106_0084101
458 Ga0496107_0000683
459 Ga0496107_0057851
460 Ga0496121_0000987
461 Ga0496121_0002840
462 Ga0496122_0015929
463 Ga0496123_0003003
464 Ga0496126_0000653
465 Ga0495678_001710
466 Ga0501033_0001954
467 Ga0501033_0022534
468 Ga0501033_0034877
469 Ga0501033_0057100
470 Ga0501033_0169575
471 Ga0501034_0012688
472 Ga0501037_0006250
473 Ga0501038_0076274
474 Ga0501046_0010634
475 Ga0501046_0010810
476 Ga0501047_0000872
477 Ga0501047_0000953
478 Ga0501047_0016086
479 Ga0501047_0082206
480 Ga0501047_0123904
481 Ga0501047_0138920
482 Ga0501067_0005202
483 Ga0501068_0059086
484 Ga0501072_0005454
485 Ga0501073_0005344
486 Ga0501035_0036513
487 Ga0501035_0062181
488 Ga0501035_0202812
489 Ga0501044_0005483
490 Ga0501044_0047120
491 Ga0501044_0053033
492 Ga0501044_0055537
493 nmdc:mga06r32_54336_c1
494 nmdc:mga08y16_98886_c1
495 nmdc:mga0n895_51673_c1
496 nmdc:mga0rr50_53093_c1
497 nmdc:mga08x19_55068_c1
498 nmdc:mga0sz30_9509_c1
499 Ga0500578_0000041
500 Ga0500641_0002501
501 Ga0500556_0000877
502 Ga0500618_000022
503 Ga0500658_0007511
504 Ga0500559_0000004
505 Ga0500559_0000806
506 Ga0500564_000405
507 Ga0500616_0024975
508 Ga0500622_0003408
509 Ga0500645_004080
510 Ga0500645_021751
511 Ga0501082_0087436
512 2585150154
513 2585154623
514 2585194769
515 2587919809
516 2643750478
517 2643884630
518 2643922686
519 2644223563
520 2644236347
521 2644351470
522 2644507368
523 2644548981
524 2644553286
525 2819538369
526 2819648186
527 2849574897
528 2857505944
529 2884963704
530 2898330577
531 2928531951
532 2928973555
533 2941488134
534 2977240453

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01078

Mg_chelatase

Magnesium chelatase, subunit ChlI

190

396

0.99

PF13335

Mg_chelatase_C

Magnesium chelatase, subunit ChlI C-terminal

402

502

0.94

PF13541

ChlI

Subunit ChlI of Mg-chelatase

20

143

0.9

PF07728

AAA_5

AAA domain (dynein-related subfamily)

213

355

0.81

PF00493

MCM

MCM P-loop domain

190

352

0.66

Structural Annotation

Top 5 Hits

ID Description Score Start End
8dvh-assembly1.cif.gz_A crystal structure of atp-dependent lon protease from bacillus subtillis (bslonba) 0.8341 3 166
6wys-assembly2.cif.gz_B lon protease proteolytic domain 0.8203 4 166
7p0m-assembly1.cif.gz_A human mitochondrial lon protease with substrate in the atpase and protease domains 0.8181 4 166
7p09-assembly1.cif.gz_F human mitochondrial lon protease with substrate in the atpase domain 0.8133 4 166
7ksm-assembly1.cif.gz_D human mitochondrial lonp1 with endogenous substrate 0.8086 3 166
ID Description Score Start End Superfamily
af_P22787_5_170_3.30.230.10 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; 0.9315 5 170 3.30.230.10
af_P9WPR1_2_172_3.30.230.10 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; 0.9201 1 172 3.30.230.10
af_P22787_5_170_3.30.230.10 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; 0.9155 5 170 3.30.230.10
af_P9WPR1_2_172_3.30.230.10 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; 0.915 1 172 3.30.230.10
af_P9WPR1_187_501_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9059 187 505 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A7D3XJM8-F1-model_v4 ATP-binding protein 0.9666 1 307 GO:0005524
AF-A0A5D8Z5B5-F1-model_v4 ATP-dependent protease 0.9648 2 168
AF-A0A0G1UIA2-F1-model_v4 Competence protein ComM-like protein 0.9641 1 178
AF-A0A7Y2XYK0-F1-model_v4 ATP-binding protein 0.9624 1 168 GO:0005524
AF-N6X976-F1-model_v4 Mg chelatase subunit ChlI 0.9573 2 147

Map