F374489
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 267 | 154 | 534 | 302 |
Family's Representative Sequence
| Representative Sequence | 3300003761|Ga0055535_1002681|Ga0055535_10026812 |
| Length | 355 |
| Sequence | VCARTSNELAHTLHSRRKNMQYLKEKAQLLQVQVVSFVRQNKVDYICNQKKMQRESNITHIKSISQLARVLGLPAPLHPLIALVDYNNVSIEMFPRGQKTSLDFYKISFKPTFTGQIKYGQAYYDFEEGGLAFLKPKQIVYPPENIESYEGLALYFHSDFIRNYPLGNTMNQYGFFSYDVSEALFLSAREKEVIASLFASIANELDNNIDNFSQDVLVSQIELLLNYSNRFYNRQFITRKAINHDIITALDKLLNNYFEEESSLKNGLPSVKYISTELKLSQRYLSDMLSSLTGLNTQQYIQNAIIEKAKEKLSTTNLSVSEIAYELGFEHSQSFSKFFKTKTNVSPLAFRQSFN |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300003761 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 | Metagenome | Endosphere |
| 2 | 2162886007 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 | Metagenome | Rhizosphere |
| 3 | 3300003316 | Sugarcane root Sample L1 | Metagenome | Unclassified |
| 4 | 3300003320 | Sugarcane root Sample H2 | Metagenome | Unclassified |
| 5 | 3300003322 | Sugarcane root Sample L2 | Metagenome | Unclassified |
| 6 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 7 | 3300003762 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 | Metagenome | Endosphere |
| 8 | 3300003794 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 | Metagenome | Endosphere |
| 9 | 3300005262 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) | Metagenome | Endosphere |
| 10 | 3300005288 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) | Metagenome | Rhizosphere |
| 11 | 3300005289 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) | Metagenome | Rhizosphere |
| 12 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 16 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 17 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 18 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 19 | 3300006946 | Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG | Metagenome | Nodule |
| 20 | 3300007076 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 | Metagenome | Rhizosphere |
| 21 | 3300009036 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG | Metagenome | Rhizosphere |
| 22 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 23 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 24 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 25 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 26 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 27 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 28 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 29 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 30 | 3300015261 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG | Metagenome | Rhizosphere |
| 31 | 3300015262 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG | Metagenome | Rhizosphere |
| 32 | 3300015265 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG | Metagenome | Rhizosphere |
| 33 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 34 | 3300025208 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) | Metagenome | Endosphere |
| 35 | 3300025242 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 36 | 3300025254 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 37 | 3300025298 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 38 | 3300025302 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 39 | 3300025304 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 40 | 3300025728 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 41 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300025920 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300027111 | Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) | Metagenome | Nodule |
| 50 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 51 | 3300030732 | Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 | Metagenome | Rhizosphere |
| 52 | 3300030744 | Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 | Metagenome | Rhizosphere |
| 53 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 54 | 3300031731 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 | Metagenome | Rhizosphere |
| 55 | 3300031824 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 | Metagenome | Rhizosphere |
| 56 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 57 | 3300031903 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 | Metagenome | Rhizosphere |
| 58 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 59 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 60 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 61 | 3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Metagenome | Rhizosphere |
| 62 | 3300041505 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG | Metagenome | Unclassified |
| 63 | 3300041512 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG | Metagenome | Unclassified |
| 64 | 3300042004 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 | Metagenome | Rhizosphere |
| 65 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 66 | 3300046453 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere | Metagenome | Rhizosphere |
| 67 | 3300046460 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere | Metagenome | Rhizosphere |
| 68 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 69 | 3300046513 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere | Metagenome | Rhizosphere |
| 70 | 3300046519 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere | Metagenome | Rhizosphere |
| 71 | 3300046524 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere | Metagenome | Rhizosphere |
| 72 | 3300046525 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere | Metagenome | Rhizosphere |
| 73 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 74 | 3300046810 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere | Metagenome | Rhizosphere |
| 75 | 3300047470 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere | Metagenome | Rhizosphere |
| 76 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 77 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 78 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 79 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 80 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 81 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 82 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 83 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 84 | 3300049679 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought | Metagenome | Rhizosphere |
| 85 | 3300049681 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_B_3_drought | Metagenome | Rhizosphere |
| 86 | 3300049705 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought | Metagenome | Rhizosphere |
| 87 | 3300049758 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought | Metagenome | Rhizosphere |
| 88 | 3300049763 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_A_4_control | Metagenome | Rhizosphere |
| 89 | 3300049766 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_B_4_drought | Metagenome | Rhizosphere |
| 90 | 3300053086 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere | Metagenome | Endosphere |
| 91 | 3300053088 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere | Metagenome | Endosphere |
| 92 | 3300053090 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere | Metagenome | Endosphere |
| 93 | 3300053092 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere | Metagenome | Endosphere |
| 94 | 3300053093 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere | Metagenome | Endosphere |
| 95 | 3300053096 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere | Metagenome | Endosphere |
| 96 | 3300053108 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere | Metagenome | Endosphere |
| 97 | 3300053109 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere | Metagenome | Endosphere |
| 98 | 3300053121 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere | Metagenome | Endosphere |
| 99 | 3300053131 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere | Metagenome | Endosphere |
| 100 | 3300053134 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere | Metagenome | Endosphere |
| 101 | 3300053136 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere | Metagenome | Endosphere |
| 102 | 3300053137 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere | Metagenome | Endosphere |
| 103 | 3300053139 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere | Metagenome | Endosphere |
| 104 | 3300053142 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere | Metagenome | Endosphere |
| 105 | 3300053147 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 endosphere | Metagenome | Endosphere |
| 106 | 3300053151 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere | Metagenome | Endosphere |
| 107 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 108 | 3300053156 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere | Metagenome | Endosphere |
| 109 | 3300053160 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere | Metagenome | Endosphere |
| 110 | 3300053177 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere | Metagenome | Endosphere |
| 111 | 3300053726 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 endosphere | Metagenome | Endosphere |
| 112 | 3300053730 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere | Metagenome | Endosphere |
| 113 | 3300055283 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere | Metagenome | Endosphere |
| 114 | 2585428061 | Chryseobacterium sp. CF356 | Isolate | Rhizosphere |
| 115 | 2585428095 | Chryseobacterium sp. YR005 | Isolate | Rhizosphere |
| 116 | 2585428115 | Chryseobacterium sp. YR561 | Isolate | Rhizosphere |
| 117 | 2585428187 | Chryseobacterium sp. YR460 | Isolate | Rhizosphere |
| 118 | 2643221600 | Flavobacterium sp. Root186 | Isolate | Unclassified |
| 119 | 2643221716 | Flavobacterium sp. Root901 | Isolate | Unclassified |
| 120 | 2643221725 | Flavobacterium sp. Root935 | Isolate | Unclassified |
| 121 | 2728369107 | Chryseobacterium kwangjuense KJ1R5 | Isolate | Unclassified |
| 122 | 2738541278 | Niastella sp. CF465 | Isolate | Unclassified |
| 123 | 2739367651 | Pedobacter sp. OK291 | Isolate | Unclassified |
| 124 | 2739367663 | Pedobacter sp. YR510 | Isolate | Unclassified |
| 125 | 2739367857 | Flavobacterium sp. GV029 | Isolate | Unclassified |
| 126 | 2739367858 | Flavobacterium sp. GV028 | Isolate | Unclassified |
| 127 | 2775506739 | Chryseobacterium sp. 1335 | Isolate | Unclassified |
| 128 | 2802428842 | Flavobacterium sp. S87F.05.LMB.W.Kidney.N | Isolate | Unclassified |
| 129 | 2818991442 | Chitinophaga pinensis 1204 | Isolate | Unclassified |
| 130 | 2818991444 | Filimonas endophytica 3197 | Isolate | Unclassified |
| 131 | 2821136567 | Chitinophaga sancti 1232 | Isolate | Unclassified |
| 132 | 2833640130 | Mariniflexile sp. TRM1-10 | Isolate | Rhizosphere |
| 133 | 2842722452 | Pedobacter sp. R-72249 | Isolate | Unclassified |
| 134 | 2842903701 | Olivibacter sp. R-72191 | Isolate | Unclassified |
| 135 | 2842909656 | Pedobacter sp. R-72393 | Isolate | Unclassified |
| 136 | 2857618242 | Flavobacterium sp. R-74482 | Isolate | Unclassified |
| 137 | 2857627736 | Pedobacter sp. R-74587 | Isolate | Unclassified |
| 138 | 2881247448 | Flavobacterium beibuense RSKm HC5 | Isolate | Rhizosphere |
| 139 | 2896109856 | Chitinophaga sp. SYP-B3965 | Isolate | Rhizosphere |
| 140 | 2904467357 | Chitinophaga sancti 3198 | Isolate | Unclassified |
| 141 | 2904555929 | Flavobacterium sp. 1750 | Isolate | Rhizosphere |
| 142 | 2914759650 | Rhizosphaericola mali | Isolate | Rhizosphere |
| 143 | 2919097161 | Chryseobacterium ginsenosidimutans 1394 | Isolate | Rhizosphere |
| 144 | 2919191525 | Flavobacterium sp. 2755 | Isolate | Rhizosphere |
| 145 | 2929154850 | Filimonas sp. R-72421 Hybrid assembly | Isolate | Unclassified |
| 146 | 2929921140 | Chitinophaga sp. R-72609 Hybrid assembly | Isolate | Unclassified |
| 147 | 2945924605 | Chryseobacterium ginsenosidimutans W1I9 | Isolate | Rhizosphere |
| 148 | 2945997725 | Pedobacter sp. W3I1 | Isolate | Rhizosphere |
| 149 | 2946019816 | Chryseobacterium sp. W4I1 | Isolate | Rhizosphere |
| 150 | 2954016120 | Flavobacterium sp. W4I14 | Isolate | Rhizosphere |
| 151 | 2958512119 | Flavobacterium sp. Sd200 | Isolate | Rhizosphere |
| 152 | 2977268062 | Flavobacterium sp. SORGH_AS 622 | Isolate | Unclassified |
| 153 | 2993372514 | Chryseobacterium sp. SLBN-27 | Isolate | Rhizosphere |
| 154 | 2993480792 | Chryseobacterium nepalense SLBN-92 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 82.02 |
| Metatranscriptomes | 0 |
| Isolates | 17.98 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 25.84 |
| Nodule | 0.75 |
| Rhizoplane | 0.37 |
| Rhizosphere | 47.19 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 1.5 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0055535_1002681 | 3300003761 | Bacteria | 5807 |
| 2 | SwRhRL2b_contig_1478118 | 2162886007 | Bacteria | 1901 |
| 3 | SwRhRL2b_contig_2871430 | 2162886007 | Bacteria | 4666 |
| 4 | rootH1_10072304 | 3300003316 | Bacteria | 11888 |
| 5 | rootH1_10072304 | 3300003323 | Bacteria | 1468 |
| 6 | rootH1_10197536 | 3300003316 | Unclassified | 1243 |
| 7 | rootH2_10149216 | 3300003320 | Bacteria | 9514 |
| 8 | rootH2_10233910 | 3300003320 | Bacteria | 2251 |
| 9 | rootH2_10278523 | 3300003320 | Bacteria | 3687 |
| 10 | rootL2_10006411 | 3300003322 | Bacteria | 14224 |
| 11 | rootL2_10011276 | 3300003322 | Bacteria | 15995 |
| 12 | rootL2_10023864 | 3300003322 | Bacteria | 36647 |
| 13 | rootL2_10025491 | 3300003322 | Bacteria | 15058 |
| 14 | rootL2_10029221 | 3300003322 | Bacteria | 12469 |
| 15 | rootL2_10048001 | 3300003322 | Bacteria | 1782 |
| 16 | rootL2_10055409 | 3300003322 | Bacteria | 4563 |
| 17 | rootL2_10079733 | 3300003322 | Bacteria | 1660 |
| 18 | rootL2_10132669 | 3300003322 | Unclassified | 3276 |
| 19 | rootH1_10001790 | 3300003323 | Bacteria | 63047 |
| 20 | rootH1_10003800 | 3300003323 | Bacteria | 30657 |
| 21 | rootH1_10005689 | 3300003323 | Bacteria | 9971 |
| 22 | rootH1_10010089 | 3300003316 | Bacteria | 2872 |
| 23 | rootH1_10010089 | 3300003323 | Bacteria | 8053 |
| 24 | rootH1_10098340 | 3300003323 | Bacteria | 4413 |
| 25 | Ga0055535_1000572 | 3300003761 | Bacteria | 31004 |
| 26 | Ga0055542_1002430 | 3300003762 | Bacteria | 6170 |
| 27 | Ga0055542_1002694 | 3300003762 | Bacteria | 5457 |
| 28 | Ga0055531_10000071 | 3300003794 | Bacteria | 110534 |
| 29 | Ga0055531_10000076 | 3300003794 | Bacteria | 106998 |
| 30 | Ga0055531_10000256 | 3300003794 | Bacteria | 56574 |
| 31 | Ga0065165_1001272 | 3300005262 | Bacteria | 28523 |
| 32 | Ga0065165_1001312 | 3300005262 | Bacteria | 27760 |
| 33 | Ga0065714_10004681 | 3300005288 | Bacteria | 6052 |
| 34 | Ga0065714_10064709 | 3300005288 | Bacteria | 22067 |
| 35 | Ga0065714_10091417 | 3300005288 | Bacteria | 1911 |
| 36 | Ga0065704_10000289 | 3300005289 | Bacteria | 49641 |
| 37 | Ga0065704_10071388 | 3300005289 | Bacteria | 11360 |
| 38 | Ga0065704_10077350 | 3300005289 | Bacteria | 4766 |
| 39 | Ga0065704_10080740 | 3300005289 | Bacteria | 3888 |
| 40 | Ga0070660_100254271 | 3300005339 | Bacteria | 1433 |
| 41 | Ga0070661_100383460 | 3300005344 | Bacteria | 1108 |
| 42 | Ga0070659_100052534 | 3300005366 | Bacteria | 3206 |
| 43 | Ga0070684_100010836 | 3300005535 | Bacteria | 7241 |
| 44 | Ga0068853_100705789 | 3300005539 | Bacteria | 962 |
| 45 | Ga0068855_100037129 | 3300005563 | Bacteria | 5796 |
| 46 | Ga0068856_100053823 | 3300005614 | Bacteria | 3969 |
| 47 | Ga0079104_1000005 | 3300006946 | Bacteria | 407099 |
| 48 | Ga0075435_100332467 | 3300007076 | Bacteria | 1301 |
| 49 | Ga0105244_10000057 | 3300009036 | Bacteria | 129775 |
| 50 | Ga0105244_10017312 | 3300009036 | Bacteria | 4075 |
| 51 | Ga0105244_10077100 | 3300009036 | Bacteria | 1654 |
| 52 | Ga0105243_10000004 | 3300009148 | Bacteria | 601266 |
| 53 | Ga0105241_10029349 | 3300009174 | Bacteria | 4104 |
| 54 | Ga0105237_10080119 | 3300009545 | Bacteria | 3256 |
| 55 | Ga0157373_10001570 | 3300013100 | Bacteria | 17432 |
| 56 | Ga0157373_10009344 | 3300013100 | Bacteria | 7245 |
| 57 | Ga0157373_10039067 | 3300013100 | Bacteria | 3398 |
| 58 | Ga0157371_10000021 | 3300013102 | Bacteria | 301017 |
| 59 | Ga0157371_10000050 | 3300013102 | Bacteria | 183160 |
| 60 | Ga0157371_10026603 | 3300013102 | Bacteria | 4203 |
| 61 | Ga0157371_10050905 | 3300013102 | Bacteria | 2943 |
| 62 | Ga0157370_10000788 | 3300013104 | Bacteria | 39828 |
| 63 | Ga0157370_10002075 | 3300013104 | Bacteria | 24529 |
| 64 | Ga0157370_10004078 | 3300013104 | Bacteria | 16933 |
| 65 | Ga0157370_10006912 | 3300013104 | Bacteria | 12407 |
| 66 | Ga0157370_10012796 | 3300013104 | Bacteria | 8675 |
| 67 | Ga0157370_10045441 | 3300013104 | Bacteria | 4213 |
| 68 | Ga0157370_10638364 | 3300013104 | Bacteria | 974 |
| 69 | Ga0157369_10000004 | 3300013105 | Bacteria | 479764 |
| 70 | Ga0157369_10009222 | 3300013105 | Bacteria | 11288 |
| 71 | Ga0157369_10053401 | 3300013105 | Bacteria | 4369 |
| 72 | Ga0157374_10050831 | 3300013296 | Bacteria | 3854 |
| 73 | Ga0182006_1000345 | 3300015261 | Bacteria | 39520 |
| 74 | Ga0182006_1000771 | 3300015261 | Bacteria | 21642 |
| 75 | Ga0182006_1015978 | 3300015261 | Bacteria | 3208 |
| 76 | Ga0182007_10000006 | 3300015262 | Bacteria | 427355 |
| 77 | Ga0182005_1000357 | 3300015265 | Bacteria | 25732 |
| 78 | Ga0182005_1000830 | 3300015265 | Bacteria | 13853 |
| 79 | Ga0163161_10000232 | 3300017792 | Bacteria | 51372 |
| 80 | Ga0163161_10061932 | 3300017792 | Unclassified | 2725 |
| 81 | Ga0163161_10078444 | 3300017792 | Bacteria | 2427 |
| 82 | Ga0209436_104206 | 3300025208 | Bacteria | 3606 |
| 83 | Ga0209258_100193 | 3300025242 | Bacteria | 124682 |
| 84 | Ga0209258_100311 | 3300025242 | Bacteria | 76151 |
| 85 | Ga0209258_100378 | 3300025242 | Bacteria | 57308 |
| 86 | Ga0209148_1000163 | 3300025254 | Bacteria | 137449 |
| 87 | Ga0209148_1000167 | 3300025254 | Bacteria | 135407 |
| 88 | Ga0209148_1000481 | 3300025254 | Bacteria | 41878 |
| 89 | Ga0209050_1002267 | 3300025298 | Bacteria | 17052 |
| 90 | Ga0207426_1008943 | 3300025302 | Bacteria | 3995 |
| 91 | Ga0209257_1000001 | 3300025304 | Bacteria | 2274655 |
| 92 | Ga0209257_1000013 | 3300025304 | Bacteria | 1047305 |
| 93 | Ga0209257_1000064 | 3300025304 | Bacteria | 356803 |
| 94 | Ga0209257_1030946 | 3300025304 | Bacteria | 1719 |
| 95 | Ga0207655_1000038 | 3300025728 | Bacteria | 348340 |
| 96 | Ga0207671_10097350 | 3300025914 | Bacteria | 2224 |
| 97 | Ga0207649_10334230 | 3300025920 | Bacteria | 1117 |
| 98 | Ga0207709_10000010 | 3300025935 | Bacteria | 601305 |
| 99 | Ga0207661_10001498 | 3300025944 | Bacteria | 15820 |
| 100 | Ga0207667_10017702 | 3300025949 | Bacteria | 8016 |
| 101 | Ga0207639_10203679 | 3300026041 | Bacteria | 1699 |
| 102 | Ga0207702_10102310 | 3300026078 | Bacteria | 2531 |
| 103 | Ga0207702_10173723 | 3300026078 | Bacteria | 1978 |
| 104 | Ga0207674_10103187 | 3300026116 | Bacteria | 2831 |
| 105 | Ga0209281_1000216 | 3300027111 | Bacteria | 125724 |
| 106 | Ga0307515_10000003 | 3300028794 | Bacteria | 891317 |
| 107 | Ga0307515_10000016 | 3300028794 | Bacteria | 554870 |
| 108 | Ga0316176_1214326 | 3300030732 | Bacteria | 7624 |
| 109 | Ga0316181_1193544 | 3300030744 | Bacteria | 5722 |
| 110 | Ga0307513_10061858 | 3300031456 | Bacteria | 3960 |
| 111 | Ga0307513_10079953 | 3300031456 | Bacteria | 3374 |
| 112 | Ga0307513_10150794 | 3300031456 | Bacteria | 2234 |
| 113 | Ga0307405_10000005 | 3300031731 | Bacteria | 376536 |
| 114 | Ga0307405_10000020 | 3300031731 | Bacteria | 156779 |
| 115 | Ga0307413_10000064 | 3300031824 | Bacteria | 26787 |
| 116 | Ga0307406_10002241 | 3300031901 | Bacteria | 10530 |
| 117 | Ga0307407_10000036 | 3300031903 | Bacteria | 76457 |
| 118 | Ga0307412_10000023 | 3300031911 | Bacteria | 237005 |
| 119 | Ga0307412_10000028 | 3300031911 | Bacteria | 213966 |
| 120 | Ga0307416_100000007 | 3300032002 | Bacteria | 433284 |
| 121 | Ga0307416_100000052 | 3300032002 | Bacteria | 114516 |
| 122 | Ga0307414_10000322 | 3300032004 | Bacteria | 27336 |
| 123 | Ga0307414_10003047 | 3300032004 | Bacteria | 8889 |
| 124 | Ga0307414_10066826 | 3300032004 | Bacteria | 2572 |
| 125 | Ga0307411_10000001 | 3300032005 | Bacteria | 931810 |
| 126 | Ga0451849_0798407 | 3300041505 | Bacteria | 1299 |
| 127 | Ga0451853_3792452 | 3300041512 | Bacteria | 1020 |
| 128 | Ga0439445_0000070 | 3300042004 | Bacteria | 15513 |
| 129 | Ga0466957_0014326 | 3300044842 | Bacteria | 4616 |
| 130 | Ga0495627_004759 | 3300046453 | Bacteria | 5612 |
| 131 | Ga0495627_008224 | 3300046453 | Bacteria | 3925 |
| 132 | Ga0495627_036980 | 3300046453 | Bacteria | 1515 |
| 133 | Ga0495638_0134985 | 3300046460 | Bacteria | 1446 |
| 134 | Ga0495606_0010399 | 3300046507 | Bacteria | 7727 |
| 135 | Ga0495606_0027309 | 3300046507 | Bacteria | 4051 |
| 136 | Ga0495616_0013697 | 3300046513 | Bacteria | 4567 |
| 137 | Ga0495632_0004127 | 3300046519 | Bacteria | 9987 |
| 138 | Ga0495648_0042208 | 3300046524 | Bacteria | 2872 |
| 139 | Ga0495663_0009822 | 3300046525 | Bacteria | 2657 |
| 140 | Ga0495625_0002868 | 3300046660 | Bacteria | 18060 |
| 141 | Ga0495625_0006572 | 3300046660 | Bacteria | 10318 |
| 142 | Ga0495625_0046357 | 3300046660 | Bacteria | 3137 |
| 143 | Ga0495625_0120137 | 3300046660 | Bacteria | 1789 |
| 144 | Ga0495625_0145975 | 3300046660 | Bacteria | 1593 |
| 145 | Ga0495660_0020578 | 3300046810 | Bacteria | 3782 |
| 146 | Ga0495681_0032851 | 3300047470 | Bacteria | 2607 |
| 147 | Ga0495686_0000125 | 3300047472 | Bacteria | 158834 |
| 148 | Ga0495686_0000481 | 3300047472 | Bacteria | 59335 |
| 149 | Ga0495686_0000537 | 3300047472 | Bacteria | 54196 |
| 150 | Ga0495686_0250762 | 3300047472 | Bacteria | 995 |
| 151 | Ga0496101_0021376 | 3300048904 | Bacteria | 4447 |
| 152 | Ga0496116_0000024 | 3300048919 | Bacteria | 471420 |
| 153 | Ga0496117_0251445 | 3300048920 | Bacteria | 964 |
| 154 | Ga0496121_0000007 | 3300048924 | Bacteria | 942516 |
| 155 | Ga0496121_0000011 | 3300048924 | Bacteria | 792193 |
| 156 | Ga0496121_0012097 | 3300048924 | Bacteria | 9483 |
| 157 | Ga0496121_0129577 | 3300048924 | Bacteria | 1891 |
| 158 | Ga0496124_0010428 | 3300048927 | Bacteria | 9406 |
| 159 | Ga0496124_0061140 | 3300048927 | Bacteria | 3158 |
| 160 | Ga0496125_0000018 | 3300048928 | Bacteria | 482390 |
| 161 | Ga0496126_0004187 | 3300048929 | Bacteria | 17384 |
| 162 | Ga0496126_0016382 | 3300048929 | Bacteria | 7414 |
| 163 | Ga0496126_0018246 | 3300048929 | Bacteria | 6960 |
| 164 | Ga0496126_0034983 | 3300048929 | Bacteria | 4711 |
| 165 | Ga0496126_0098205 | 3300048929 | Bacteria | 2566 |
| 166 | Ga0496126_0105436 | 3300048929 | Bacteria | 2461 |
| 167 | Ga0501249_000070 | 3300049679 | Bacteria | 35806 |
| 168 | Ga0501249_003099 | 3300049679 | Bacteria | 3346 |
| 169 | Ga0501251_001713 | 3300049681 | Bacteria | 2068 |
| 170 | Ga0501225_0002082 | 3300049705 | Bacteria | 6221 |
| 171 | Ga0501241_000278 | 3300049758 | Bacteria | 11304 |
| 172 | Ga0501241_000514 | 3300049758 | Bacteria | 8351 |
| 173 | Ga0501266_000019 | 3300049763 | Bacteria | 114355 |
| 174 | Ga0501269_000098 | 3300049766 | Bacteria | 27230 |
| 175 | Ga0500578_0001543 | 3300053086 | Bacteria | 22580 |
| 176 | Ga0500578_0032966 | 3300053086 | Bacteria | 3330 |
| 177 | Ga0500644_0000081 | 3300053088 | Bacteria | 58662 |
| 178 | Ga0500646_0010005 | 3300053090 | Unclassified | 2430 |
| 179 | Ga0500646_0015945 | 3300053090 | Bacteria | 1959 |
| 180 | Ga0500646_0036303 | 3300053090 | Bacteria | 1372 |
| 181 | Ga0500583_0000113 | 3300053092 | Bacteria | 39569 |
| 182 | Ga0500583_0003623 | 3300053092 | Bacteria | 4897 |
| 183 | Ga0500583_0010035 | 3300053092 | Bacteria | 3493 |
| 184 | Ga0500651_0000084 | 3300053093 | Bacteria | 60127 |
| 185 | Ga0500651_0071314 | 3300053093 | Bacteria | 2162 |
| 186 | Ga0500641_0045430 | 3300053096 | Bacteria | 1789 |
| 187 | Ga0500562_003639 | 3300053108 | Bacteria | 3871 |
| 188 | Ga0500569_000102 | 3300053109 | Bacteria | 13321 |
| 189 | Ga0500607_031532 | 3300053121 | Bacteria | 2914 |
| 190 | Ga0500652_068548 | 3300053131 | Bacteria | 1467 |
| 191 | Ga0500658_0000002 | 3300053134 | Bacteria | 548440 |
| 192 | Ga0500658_0000003 | 3300053134 | Bacteria | 512506 |
| 193 | Ga0500658_0000826 | 3300053134 | Bacteria | 12746 |
| 194 | Ga0500658_0009973 | 3300053134 | Bacteria | 3504 |
| 195 | Ga0500658_0056122 | 3300053134 | Bacteria | 1624 |
| 196 | Ga0500559_0003234 | 3300053136 | Bacteria | 8093 |
| 197 | Ga0500559_0020064 | 3300053136 | Bacteria | 2825 |
| 198 | Ga0500561_0027879 | 3300053137 | Bacteria | 1397 |
| 199 | Ga0500568_0008752 | 3300053139 | Bacteria | 4853 |
| 200 | Ga0500568_0019071 | 3300053139 | Bacteria | 2990 |
| 201 | Ga0500577_0029197 | 3300053142 | Bacteria | 1907 |
| 202 | Ga0500589_022130 | 3300053147 | Bacteria | 2923 |
| 203 | Ga0500604_0028160 | 3300053151 | Bacteria | 1630 |
| 204 | Ga0500616_0020567 | 3300053153 | Bacteria | 3706 |
| 205 | Ga0500616_0028768 | 3300053153 | Bacteria | 3060 |
| 206 | Ga0500616_0120692 | 3300053153 | Bacteria | 1253 |
| 207 | Ga0500622_0000004 | 3300053156 | Bacteria | 557587 |
| 208 | Ga0500622_0000005 | 3300053156 | Bacteria | 502443 |
| 209 | Ga0500622_0000008 | 3300053156 | Bacteria | 423636 |
| 210 | Ga0500622_0000051 | 3300053156 | Bacteria | 145514 |
| 211 | Ga0500622_0000619 | 3300053156 | Bacteria | 32146 |
| 212 | Ga0500622_0003033 | 3300053156 | Bacteria | 11597 |
| 213 | Ga0500622_0009355 | 3300053156 | Bacteria | 5424 |
| 214 | Ga0500622_0023980 | 3300053156 | Bacteria | 3229 |
| 215 | Ga0500622_0082758 | 3300053156 | Bacteria | 1604 |
| 216 | Ga0500633_0063103 | 3300053160 | Bacteria | 1307 |
| 217 | Ga0500636_0103487 | 3300053177 | Bacteria | 1616 |
| 218 | Ga0500584_005708 | 3300053726 | Bacteria | 5264 |
| 219 | Ga0500645_044480 | 3300053730 | Bacteria | 1306 |
| 220 | Ga0500661_005166 | 3300055283 | Bacteria | 2444 |
| 221 | 2587750525 | 2585428061 | Bacteria | 3939663 |
| 222 | 2587751408 | 2585428061 | Bacteria | 3939663 |
| 223 | 2587866844 | 2585428095 | Bacteria | 3789702 |
| 224 | 2587943463 | 2585428115 | Bacteria | 4420269 |
| 225 | 2588234087 | 2585428187 | Bacteria | 4629388 |
| 226 | 2644009094 | 2643221600 | Bacteria | 5530138 |
| 227 | 2644644009 | 2643221716 | Bacteria | 4986332 |
| 228 | 2644682890 | 2643221725 | Bacteria | 5087956 |
| 229 | 2729199070 | 2728369107 | Bacteria | 5082720 |
| 230 | 2738731280 | 2738541278 | Bacteria | 9755573 |
| 231 | 2739589396 | 2739367651 | Bacteria | 6359826 |
| 232 | 2739646020 | 2739367663 | Bacteria | 5040914 |
| 233 | 2740002737 | 2739367857 | Bacteria | 5433684 |
| 234 | 2740007554 | 2739367858 | Bacteria | 5432813 |
| 235 | 2775673586 | 2775506739 | Bacteria | 3855222 |
| 236 | 2802654494 | 2802428842 | Bacteria | 4926114 |
| 237 | 2819575511 | 2818991442 | Bacteria | 8318214 |
| 238 | 2819576589 | 2818991442 | Bacteria | 8318214 |
| 239 | 2819589477 | 2818991444 | Bacteria | 6968812 |
| 240 | 2821138067 | 2821136567 | Bacteria | 8080116 |
| 241 | 2821143201 | 2821136567 | Bacteria | 8080116 |
| 242 | 2833643262 | 2833640130 | Bacteria | 4858325 |
| 243 | 2842725910 | 2842722452 | Bacteria | 6263924 |
| 244 | 2842906475 | 2842903701 | Bacteria | 6986368 |
| 245 | 2842908948 | 2842903701 | Bacteria | 6986368 |
| 246 | 2842912912 | 2842909656 | Bacteria | 6185908 |
| 247 | 2857618724 | 2857618242 | Bacteria | 5635925 |
| 248 | 2857619611 | 2857618242 | Bacteria | 5635925 |
| 249 | 2857628167 | 2857627736 | Bacteria | 5625397 |
| 250 | 2881249642 | 2881247448 | Bacteria | 3717788 |
| 251 | 2896113452 | 2896109856 | Bacteria | 7140722 |
| 252 | 2904468862 | 2904467357 | Bacteria | 8057758 |
| 253 | 2904470096 | 2904467357 | Bacteria | 8057758 |
| 254 | 2904557125 | 2904555929 | Bacteria | 5218588 |
| 255 | 2914761030 | 2914759650 | Bacteria | 4701441 |
| 256 | 2914761704 | 2914759650 | Bacteria | 4701441 |
| 257 | 2919097692 | 2919097161 | Bacteria | 3860339 |
| 258 | 2919194111 | 2919191525 | Bacteria | 5765973 |
| 259 | 2929157107 | 2929154850 | Bacteria | 6753285 |
| 260 | 2929924087 | 2929921140 | Bacteria | 8649150 |
| 261 | 2945928298 | 2945924605 | Bacteria | 4296724 |
| 262 | 2945998159 | 2945997725 | Bacteria | 6404843 |
| 263 | 2946021098 | 2946019816 | Bacteria | 4621265 |
| 264 | 2954020313 | 2954016120 | Bacteria | 6446024 |
| 265 | 2958513013 | 2958512119 | Bacteria | 4528530 |
| 266 | 2977270596 | 2977268062 | Bacteria | 5243061 |
| 267 | 2993373710 | 2993372514 | Bacteria | 4214139 |
| 268 | 2993483680 | 2993480792 | Bacteria | 4022225 |
| 269 | Ga0055535_1002681 | |||
| 270 | SwRhRL2b_contig_1478118 | |||
| 271 | SwRhRL2b_contig_2871430 | |||
| 272 | rootH1_10072304 | |||
| 273 | rootH1_10197536 | |||
| 274 | rootH2_10149216 | |||
| 275 | rootH2_10233910 | |||
| 276 | rootH2_10278523 | |||
| 277 | rootL2_10006411 | |||
| 278 | rootL2_10011276 | |||
| 279 | rootL2_10023864 | |||
| 280 | rootL2_10025491 | |||
| 281 | rootL2_10029221 | |||
| 282 | rootL2_10048001 | |||
| 283 | rootL2_10055409 | |||
| 284 | rootL2_10079733 | |||
| 285 | rootL2_10132669 | |||
| 286 | rootH1_10001790 | |||
| 287 | rootH1_10003800 | |||
| 288 | rootH1_10005689 | |||
| 289 | rootH1_10010089 | |||
| 290 | rootH1_10098340 | |||
| 291 | Ga0055535_1000572 | |||
| 292 | Ga0055542_1002430 | |||
| 293 | Ga0055542_1002694 | |||
| 294 | Ga0055531_10000071 | |||
| 295 | Ga0055531_10000076 | |||
| 296 | Ga0055531_10000256 | |||
| 297 | Ga0065165_1001272 | |||
| 298 | Ga0065165_1001312 | |||
| 299 | Ga0065714_10004681 | |||
| 300 | Ga0065714_10064709 | |||
| 301 | Ga0065714_10091417 | |||
| 302 | Ga0065704_10000289 | |||
| 303 | Ga0065704_10071388 | |||
| 304 | Ga0065704_10077350 | |||
| 305 | Ga0065704_10080740 | |||
| 306 | Ga0070660_100254271 | |||
| 307 | Ga0070661_100383460 | |||
| 308 | Ga0070659_100052534 | |||
| 309 | Ga0070684_100010836 | |||
| 310 | Ga0068853_100705789 | |||
| 311 | Ga0068855_100037129 | |||
| 312 | Ga0068856_100053823 | |||
| 313 | Ga0079104_1000005 | |||
| 314 | Ga0075435_100332467 | |||
| 315 | Ga0105244_10000057 | |||
| 316 | Ga0105244_10017312 | |||
| 317 | Ga0105244_10077100 | |||
| 318 | Ga0105243_10000004 | |||
| 319 | Ga0105241_10029349 | |||
| 320 | Ga0105237_10080119 | |||
| 321 | Ga0157373_10001570 | |||
| 322 | Ga0157373_10009344 | |||
| 323 | Ga0157373_10039067 | |||
| 324 | Ga0157371_10000021 | |||
| 325 | Ga0157371_10000050 | |||
| 326 | Ga0157371_10026603 | |||
| 327 | Ga0157371_10050905 | |||
| 328 | Ga0157370_10000788 | |||
| 329 | Ga0157370_10002075 | |||
| 330 | Ga0157370_10004078 | |||
| 331 | Ga0157370_10006912 | |||
| 332 | Ga0157370_10012796 | |||
| 333 | Ga0157370_10045441 | |||
| 334 | Ga0157370_10638364 | |||
| 335 | Ga0157369_10000004 | |||
| 336 | Ga0157369_10009222 | |||
| 337 | Ga0157369_10053401 | |||
| 338 | Ga0157374_10050831 | |||
| 339 | Ga0182006_1000345 | |||
| 340 | Ga0182006_1000771 | |||
| 341 | Ga0182006_1015978 | |||
| 342 | Ga0182007_10000006 | |||
| 343 | Ga0182005_1000357 | |||
| 344 | Ga0182005_1000830 | |||
| 345 | Ga0163161_10000232 | |||
| 346 | Ga0163161_10061932 | |||
| 347 | Ga0163161_10078444 | |||
| 348 | Ga0209436_104206 | |||
| 349 | Ga0209258_100193 | |||
| 350 | Ga0209258_100311 | |||
| 351 | Ga0209258_100378 | |||
| 352 | Ga0209148_1000163 | |||
| 353 | Ga0209148_1000167 | |||
| 354 | Ga0209148_1000481 | |||
| 355 | Ga0209050_1002267 | |||
| 356 | Ga0207426_1008943 | |||
| 357 | Ga0209257_1000001 | |||
| 358 | Ga0209257_1000013 | |||
| 359 | Ga0209257_1000064 | |||
| 360 | Ga0209257_1030946 | |||
| 361 | Ga0207655_1000038 | |||
| 362 | Ga0207671_10097350 | |||
| 363 | Ga0207649_10334230 | |||
| 364 | Ga0207709_10000010 | |||
| 365 | Ga0207661_10001498 | |||
| 366 | Ga0207667_10017702 | |||
| 367 | Ga0207639_10203679 | |||
| 368 | Ga0207702_10102310 | |||
| 369 | Ga0207702_10173723 | |||
| 370 | Ga0207674_10103187 | |||
| 371 | Ga0209281_1000216 | |||
| 372 | Ga0307515_10000003 | |||
| 373 | Ga0307515_10000016 | |||
| 374 | Ga0316176_1214326 | |||
| 375 | Ga0316181_1193544 | |||
| 376 | Ga0307513_10061858 | |||
| 377 | Ga0307513_10079953 | |||
| 378 | Ga0307513_10150794 | |||
| 379 | Ga0307405_10000005 | |||
| 380 | Ga0307405_10000020 | |||
| 381 | Ga0307413_10000064 | |||
| 382 | Ga0307406_10002241 | |||
| 383 | Ga0307407_10000036 | |||
| 384 | Ga0307412_10000023 | |||
| 385 | Ga0307412_10000028 | |||
| 386 | Ga0307416_100000007 | |||
| 387 | Ga0307416_100000052 | |||
| 388 | Ga0307414_10000322 | |||
| 389 | Ga0307414_10003047 | |||
| 390 | Ga0307414_10066826 | |||
| 391 | Ga0307411_10000001 | |||
| 392 | Ga0451849_0798407 | |||
| 393 | Ga0451853_3792452 | |||
| 394 | Ga0439445_0000070 | |||
| 395 | Ga0466957_0014326 | |||
| 396 | Ga0495627_004759 | |||
| 397 | Ga0495627_008224 | |||
| 398 | Ga0495627_036980 | |||
| 399 | Ga0495638_0134985 | |||
| 400 | Ga0495606_0010399 | |||
| 401 | Ga0495606_0027309 | |||
| 402 | Ga0495616_0013697 | |||
| 403 | Ga0495632_0004127 | |||
| 404 | Ga0495648_0042208 | |||
| 405 | Ga0495663_0009822 | |||
| 406 | Ga0495625_0002868 | |||
| 407 | Ga0495625_0006572 | |||
| 408 | Ga0495625_0046357 | |||
| 409 | Ga0495625_0120137 | |||
| 410 | Ga0495625_0145975 | |||
| 411 | Ga0495660_0020578 | |||
| 412 | Ga0495681_0032851 | |||
| 413 | Ga0495686_0000125 | |||
| 414 | Ga0495686_0000481 | |||
| 415 | Ga0495686_0000537 | |||
| 416 | Ga0495686_0250762 | |||
| 417 | Ga0496101_0021376 | |||
| 418 | Ga0496116_0000024 | |||
| 419 | Ga0496117_0251445 | |||
| 420 | Ga0496121_0000007 | |||
| 421 | Ga0496121_0000011 | |||
| 422 | Ga0496121_0012097 | |||
| 423 | Ga0496121_0129577 | |||
| 424 | Ga0496124_0010428 | |||
| 425 | Ga0496124_0061140 | |||
| 426 | Ga0496125_0000018 | |||
| 427 | Ga0496126_0004187 | |||
| 428 | Ga0496126_0016382 | |||
| 429 | Ga0496126_0018246 | |||
| 430 | Ga0496126_0034983 | |||
| 431 | Ga0496126_0098205 | |||
| 432 | Ga0496126_0105436 | |||
| 433 | Ga0501249_000070 | |||
| 434 | Ga0501249_003099 | |||
| 435 | Ga0501251_001713 | |||
| 436 | Ga0501225_0002082 | |||
| 437 | Ga0501241_000278 | |||
| 438 | Ga0501241_000514 | |||
| 439 | Ga0501266_000019 | |||
| 440 | Ga0501269_000098 | |||
| 441 | Ga0500578_0001543 | |||
| 442 | Ga0500578_0032966 | |||
| 443 | Ga0500644_0000081 | |||
| 444 | Ga0500646_0010005 | |||
| 445 | Ga0500646_0015945 | |||
| 446 | Ga0500646_0036303 | |||
| 447 | Ga0500583_0000113 | |||
| 448 | Ga0500583_0003623 | |||
| 449 | Ga0500583_0010035 | |||
| 450 | Ga0500651_0000084 | |||
| 451 | Ga0500651_0071314 | |||
| 452 | Ga0500641_0045430 | |||
| 453 | Ga0500562_003639 | |||
| 454 | Ga0500569_000102 | |||
| 455 | Ga0500607_031532 | |||
| 456 | Ga0500652_068548 | |||
| 457 | Ga0500658_0000002 | |||
| 458 | Ga0500658_0000003 | |||
| 459 | Ga0500658_0000826 | |||
| 460 | Ga0500658_0009973 | |||
| 461 | Ga0500658_0056122 | |||
| 462 | Ga0500559_0003234 | |||
| 463 | Ga0500559_0020064 | |||
| 464 | Ga0500561_0027879 | |||
| 465 | Ga0500568_0008752 | |||
| 466 | Ga0500568_0019071 | |||
| 467 | Ga0500577_0029197 | |||
| 468 | Ga0500589_022130 | |||
| 469 | Ga0500604_0028160 | |||
| 470 | Ga0500616_0020567 | |||
| 471 | Ga0500616_0028768 | |||
| 472 | Ga0500616_0120692 | |||
| 473 | Ga0500622_0000004 | |||
| 474 | Ga0500622_0000005 | |||
| 475 | Ga0500622_0000008 | |||
| 476 | Ga0500622_0000051 | |||
| 477 | Ga0500622_0000619 | |||
| 478 | Ga0500622_0003033 | |||
| 479 | Ga0500622_0009355 | |||
| 480 | Ga0500622_0023980 | |||
| 481 | Ga0500622_0082758 | |||
| 482 | Ga0500633_0063103 | |||
| 483 | Ga0500636_0103487 | |||
| 484 | Ga0500584_005708 | |||
| 485 | Ga0500645_044480 | |||
| 486 | Ga0500661_005166 | |||
| 487 | 2587750525 | |||
| 488 | 2587751408 | |||
| 489 | 2587866844 | |||
| 490 | 2587943463 | |||
| 491 | 2588234087 | |||
| 492 | 2644009094 | |||
| 493 | 2644644009 | |||
| 494 | 2644682890 | |||
| 495 | 2729199070 | |||
| 496 | 2738731280 | |||
| 497 | 2739589396 | |||
| 498 | 2739646020 | |||
| 499 | 2740002737 | |||
| 500 | 2740007554 | |||
| 501 | 2775673586 | |||
| 502 | 2802654494 | |||
| 503 | 2819575511 | |||
| 504 | 2819576589 | |||
| 505 | 2819589477 | |||
| 506 | 2821138067 | |||
| 507 | 2821143201 | |||
| 508 | 2833643262 | |||
| 509 | 2842725910 | |||
| 510 | 2842906475 | |||
| 511 | 2842908948 | |||
| 512 | 2842912912 | |||
| 513 | 2857618724 | |||
| 514 | 2857619611 | |||
| 515 | 2857628167 | |||
| 516 | 2881249642 | |||
| 517 | 2896113452 | |||
| 518 | 2904468862 | |||
| 519 | 2904470096 | |||
| 520 | 2904557125 | |||
| 521 | 2914761030 | |||
| 522 | 2914761704 | |||
| 523 | 2919097692 | |||
| 524 | 2919194111 | |||
| 525 | 2929157107 | |||
| 526 | 2929924087 | |||
| 527 | 2945928298 | |||
| 528 | 2945998159 | |||
| 529 | 2946021098 | |||
| 530 | 2954020313 | |||
| 531 | 2958513013 | |||
| 532 | 2977270596 | |||
| 533 | 2993373710 | |||
| 534 | 2993483680 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 6swi-assembly1.cif.gz_A | the c-terminal domain of arat, a response regulator from geobacillus stearothermophilus | 0.8726 | 196 | 303 |
| 3oio-assembly1.cif.gz_A | crystal structure of transcriptional regulator (arac-type dna-binding domain-containing proteins) from chromobacterium violaceum | 0.8615 | 190 | 302 |
| 7vwz-assembly1.cif.gz_G | cryo-em structure of rob-dependent transcription activation complex in a unique conformation | 0.8604 | 204 | 302 |
| 3mkl-assembly2.cif.gz_B | crystal structure of dna-binding transcriptional dual regulator from escherichia coli k-12 | 0.8577 | 196 | 302 |
| 3w6v-assembly1.cif.gz_A | crystal structure of the dna-binding domain of adpa, the global transcriptional factor, in complex with a target dna | 0.8516 | 193 | 303 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 3lsgA02 | Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like | 0.9795 | 257 | 301 | 1.10.10.60 |
| 1d5yD02 | Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like | 0.9602 | 255 | 302 | 1.10.10.60 |
| af_P32677_219_275_1.10.10.60 | Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like | 0.9584 | 253 | 304 | 1.10.10.60 |
| 1bl0A02 | Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like | 0.948 | 258 | 301 | 1.10.10.60 |
| 3lsgB02 | Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like | 0.9461 | 257 | 301 | 1.10.10.60 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A4Q3EPE4-F1-model_v4 | deleted | 0.99 | 212 | 305 |
|
| AF-A0A4Q3EPE4-F1-model_v4 | deleted | 0.9696 | 212 | 305 |
|
| AF-A0A4R1AGG4-F1-model_v4 | deleted | 0.9494 | 218 | 303 |
|
| AF-A0A1W6LKE3-F1-model_v4 | Xylose operon regulatory protein | 0.9205 | 195 | 302 |
GO:0000976
GO:0003700 |
| AF-A0A841TBB5-F1-model_v4 | Helix-turn-helix transcriptional regulator | 0.9174 | 189 | 303 |
GO:0003700
GO:0043565 |