F374497

General Info

Members Datasets Scaffolds Average Seq Length
267 174 532 696

Family's Representative Sequence

Representative Sequence 3300005262|Ga0065165_1005276|Ga0065165_10052763
Length 728
Sequence MIRPLLLASAALFVAPPAFADTTPKTGGDSTTSNATPATSDVTDADASPQSDQDHNIIVTAPIRTSEADVLHGTSVVSGAELTRNMQPTIGETLAKQPGVSASSFGPSASRPILRGFQGERVRIMTDGIGSIDVSNTSADHAVVIDPLLSERVEVLRGPAALLFGSSAVGGVVNVIDNRIPRSIPANGYRLSGIATYGSAANERSGAAAGDVAIGRLVLHADGSYSKTDDLRIGGYALTPEKRAEALASAQLPPDPNDPEPIDFAANAAVKGTLPNTAAETWTAGVGAALITDGGNIGVSYSHYDSLYGVPIRFATLPGQEQEAPRLDVVQNRFDLRAEANASGFLQQVRLRVGYANYRHFELEEDGAVGTAFYNKGLEGRVELVQSDRGGWKGASGMQIFTRNFDVKGDEAFLPKNQTEQTGLFTLQQIDLGSFKAEAGLRYEFTRQSANPVAGDLRFFSGDRDFHTLSGSLGGSYGLSDAVRIGLNLSRTERAPSAEELFANGAHAGTQAYELGNPNFKPEESWGIEATLHAHGEGYSFDASAYYNWFSNYISDAQVAQSICEAAAAPSGRTVDLPCFQYTQSDARYYGFEAQGSLKVAEIGATKINVDALGDYVHANIVDQGPVPRIPAMRVLGGIEAQSDRVNGRFEVEHVFDQNRVAAYETTTDGYTMVNASVELKPFANDKIGLTLSANNIFDVDARRAASYLKDYAPLAGRDIRATLRFSL

Samples

Sample ID Description Type Environment
1 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
2 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
3 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
4 3300001976 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S7 Metagenome Rhizosphere
5 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
6 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
7 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
8 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
9 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
10 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
11 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
12 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
13 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
14 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
15 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
16 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
17 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
18 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
19 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
20 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
21 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
22 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
23 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
24 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
25 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
26 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
27 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
28 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
29 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
30 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
31 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
32 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
33 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
34 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
35 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
36 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
37 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
38 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
39 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
40 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
41 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
43 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
44 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
45 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
46 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
47 3300009978 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_199 metaG Metagenome Rhizosphere
48 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
49 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
50 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
51 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
52 3300015690 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_D05 Metagenome Rhizosphere
53 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
54 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
55 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
56 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
57 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
58 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
59 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
60 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
61 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
63 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
88 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
91 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
92 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
93 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
94 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
95 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
96 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
97 3300041462 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_8 MetaG Metagenome Rhizoplane
98 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
99 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
100 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
101 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
102 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
103 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
104 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
105 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
106 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
107 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
108 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
109 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
110 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
111 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
112 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
113 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
114 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
115 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
116 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
117 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
118 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
119 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
120 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
121 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
122 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
123 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
124 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
125 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
126 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
127 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
128 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
129 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
130 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
131 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
132 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
133 3300049513 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D25_A_7_control Metagenome Rhizosphere
134 3300049515 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_B_5_drought Metagenome Rhizosphere
135 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
136 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
137 3300049690 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_A_4_drought Metagenome Rhizosphere
138 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
139 3300049775 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_A_5_drought Metagenome Rhizosphere
140 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
141 3300049777 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G24_A_5_control Metagenome Rhizosphere
142 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
143 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
144 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
145 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
146 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
147 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
148 3300053116 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 endosphere Metagenome Endosphere
149 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
150 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
151 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
152 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
153 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
154 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
155 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
156 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
157 2512564014 Sphingobium sp. AP49 Isolate Rhizosphere
158 2599185359 Sphingomonas sp. NFR04 Isolate Rhizoplane
159 2643221622 Sphingomonas sp. Root241 Isolate Unclassified
160 2775507255 Sphingobium indicum B90A Isolate Rhizosphere
161 2818991466 Sphingomonas trueperi 1152a Isolate Unclassified
162 2830075706 Sphingomonas jinjuensis DSM 21457 Isolate Rhizosphere
163 2879163058 Sphingomonas pokkalii L3B27 Isolate Rhizosphere
164 2885429604 Sphingomonas sp. WZY 27 Isolate Rhizosphere
165 2928027323 Sphingomonas sp. 1185 Isolate Unclassified
166 2928526807 Sphingomonas trueperi 1770 Isolate Rhizosphere
167 2928968154 Sphingomonas trueperi 1075 Isolate Unclassified
168 2946787523 Sphingomonas faeni W4I17 Isolate Rhizosphere
169 2984555340 Sphingomonas sp. SORGH_AS789 Isolate Aerial Root
170 2984564862 Sphingomonas sp. SORGH_AS870 Isolate Aerial Root
171 2990265787 Sphingomonas sp. SORGH_AS802 Isolate Aerial Root
172 2993356040 Sphingomonas sp. SORGH_AS742 Isolate Aerial Root
173 2993693658 Sphingomonas sp. SORGH_AS438 Isolate Aerial Root
174 8057101203 Sphingomonas lycopersici MMSM20 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 92.88
Metatranscriptomes 0
Isolates 7.12

Biome Distribution

Category Percentage (%)
Aerial Root 1.87
Bulb 0
Endosphere 28.84
Nodule 0
Rhizoplane 2.25
Rhizosphere 59.55
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065165_1005276 3300005262 Bacteria 7373
2 JGI24736J21556_1001855 3300001904 Bacteria 3773
3 JGI24741J21665_1001264 3300001915 Bacteria 7427
4 JGI24752J21851_1001535 3300001976 Bacteria 3108
5 JGI24740J21852_10003760 3300001979 Bacteria 6606
6 JGI24739J22299_10000898 3300001989 Bacteria 10998
7 JGI24739J22299_10002135 3300001989 Bacteria 7581
8 JGI24739J22299_10003919 3300001989 Bacteria 5691
9 JGI24737J22298_10001055 3300001990 Bacteria 9732
10 JGI24737J22298_10006048 3300001990 Bacteria 4151
11 JGI24735J21928_10001582 3300002067 Bacteria 8082
12 JGI24735J21928_10006448 3300002067 Bacteria 3862
13 JGI24738J21930_10000369 3300002075 Bacteria 12550
14 JGI25150J39212_1000798 3300002774 Bacteria 10720
15 JGI25150J39212_1001047 3300002774 Bacteria 8444
16 JGI25153J46596_10000027 3300003215 Bacteria 210760
17 JGI25153J46596_10000535 3300003215 Bacteria 23843
18 Ga0055526_1001270 3300003771 Bacteria 18096
19 Ga0055526_1001321 3300003771 Bacteria 17733
20 Ga0055537_1000482 3300003773 Bacteria 24718
21 Ga0055537_1005084 3300003773 Bacteria 3598
22 Ga0055524_1000081 3300003775 Bacteria 119940
23 Ga0055524_1000165 3300003775 Bacteria 75996
24 Ga0055530_10000084 3300003791 Bacteria 80615
25 Ga0055530_10005398 3300003791 Bacteria 6106
26 Ga0055540_1000884 3300003792 Bacteria 19850
27 Ga0055540_1001052 3300003792 Bacteria 17586
28 Ga0055531_10000090 3300003794 Bacteria 100342
29 Ga0055531_10004776 3300003794 Bacteria 8099
30 Ga0055531_10013341 3300003794 Bacteria 3793
31 Ga0065165_1003170 3300005262 Bacteria 12060
32 Ga0065165_1011697 3300005262 Bacteria 3629
33 Ga0070670_100011742 3300005331 Bacteria 7492
34 Ga0070670_100067075 3300005331 Bacteria 3079
35 Ga0070666_10000664 3300005335 Bacteria 20761
36 Ga0070668_100009929 3300005347 Bacteria 7051
37 Ga0070669_100000001 3300005353 Bacteria 537589
38 Ga0070671_100000007 3300005355 Bacteria 250397
39 Ga0070667_100000232 3300005367 Bacteria 63566
40 Ga0070663_100031330 3300005455 Bacteria 3654
41 Ga0068853_100009016 3300005539 Bacteria 8035
42 Ga0070665_100000043 3300005548 Bacteria 279774
43 Ga0070665_100009931 3300005548 Bacteria 9627
44 Ga0070664_100028113 3300005564 Bacteria 4676
45 Ga0068854_100008016 3300005578 Bacteria 6767
46 Ga0068856_100001038 3300005614 Bacteria 29509
47 Ga0068859_100001637 3300005617 Bacteria 22877
48 Ga0068859_100012049 3300005617 Bacteria 8687
49 Ga0068864_100000323 3300005618 Bacteria 42172
50 Ga0068861_100003719 3300005719 Bacteria 10177
51 Ga0068861_100007015 3300005719 Bacteria 7697
52 Ga0068851_10026682 3300005834 Bacteria 2841
53 Ga0068863_100000029 3300005841 Bacteria 177191
54 Ga0068863_100062515 3300005841 Bacteria 3521
55 Ga0068858_100002506 3300005842 Bacteria 18529
56 Ga0068860_100027977 3300005843 Bacteria 5428
57 Ga0068862_100023922 3300005844 Bacteria 5120
58 Ga0081455_10000220 3300005937 Bacteria 73579
59 Ga0081539_10015064 3300005985 Bacteria 5662
60 Ga0075366_10001360 3300006195 Bacteria 12216
61 Ga0097620_100001637 3300006931 Bacteria 22877
62 Ga0097620_100012049 3300006931 Bacteria 8687
63 Ga0105247_10009946 3300009101 Bacteria 5760
64 Ga0105243_10047792 3300009148 Bacteria 3371
65 Ga0105241_10004643 3300009174 Bacteria 10154
66 Ga0105248_10002018 3300009177 Bacteria 22518
67 Ga0105249_10024063 3300009553 Bacteria 5470
68 Ga0105148_100118 3300009978 Bacteria 12217
69 Ga0105239_10080230 3300010375 Bacteria 3590
70 Ga0157369_10047319 3300013105 Bacteria 4671
71 Ga0157378_10034683 3300013297 Bacteria 4462
72 Ga0163162_10106390 3300013306 Bacteria 2901
73 Ga0183363_1008 3300015690 Bacteria 194027
74 Ga0209147_100992 3300025229 Bacteria 12328
75 Ga0207425_1000005 3300025245 Bacteria 900502
76 Ga0207425_1000094 3300025245 Bacteria 85629
77 Ga0207425_1001706 3300025245 Bacteria 8727
78 Ga0209129_1000228 3300025258 Bacteria 63465
79 Ga0209565_1000007 3300025263 Bacteria 784361
80 Ga0209565_1000012 3300025263 Bacteria 606500
81 Ga0209565_1000180 3300025263 Bacteria 78672
82 Ga0209565_1000386 3300025263 Bacteria 37364
83 Ga0209676_1001342 3300025292 Bacteria 24674
84 Ga0209025_1000515 3300025294 Bacteria 73801
85 Ga0209025_1000727 3300025294 Bacteria 55857
86 Ga0209564_1000680 3300025295 Bacteria 50194
87 Ga0209564_1002114 3300025295 Bacteria 16891
88 Ga0209758_1000002 3300025297 Bacteria 1400310
89 Ga0209758_1000108 3300025297 Bacteria 216541
90 Ga0209758_1005222 3300025297 Bacteria 10178
91 Ga0209050_1000001 3300025298 Bacteria 3563507
92 Ga0209050_1000051 3300025298 Bacteria 353153
93 Ga0209050_1000342 3300025298 Bacteria 92644
94 Ga0209050_1009035 3300025298 Bacteria 5186
95 Ga0209256_1000008 3300025299 Bacteria 975723
96 Ga0209256_1000012 3300025299 Bacteria 790371
97 Ga0209051_1000226 3300025303 Bacteria 94990
98 Ga0209051_1000999 3300025303 Bacteria 27167
99 Ga0209257_1000028 3300025304 Bacteria 699493
100 Ga0209257_1001517 3300025304 Bacteria 27226
101 Ga0209257_1001522 3300025304 Bacteria 27092
102 Ga0209257_1002018 3300025304 Bacteria 21696
103 Ga0209257_1007904 3300025304 Bacteria 6251
104 Ga0209257_1011412 3300025304 Bacteria 4280
105 Ga0209257_1016770 3300025304 Bacteria 2938
106 Ga0207697_10000248 3300025315 Bacteria 29669
107 Ga0207710_10002467 3300025900 Bacteria 8575
108 Ga0207680_10000390 3300025903 Bacteria 20913
109 Ga0207647_10000783 3300025904 Bacteria 24687
110 Ga0207647_10032139 3300025904 Bacteria 3374
111 Ga0207654_10014666 3300025911 Bacteria 4052
112 Ga0207671_10024369 3300025914 Bacteria 4551
113 Ga0207681_10000002 3300025923 Bacteria 985597
114 Ga0207650_10001327 3300025925 Bacteria 17901
115 Ga0207644_10000002 3300025931 Bacteria 942221
116 Ga0207711_10003255 3300025941 Bacteria 14149
117 Ga0207667_10025973 3300025949 Bacteria 6406
118 Ga0207712_10034595 3300025961 Bacteria 3424
119 Ga0207668_10005568 3300025972 Bacteria 7425
120 Ga0207668_10006816 3300025972 Bacteria 6769
121 Ga0207640_10005401 3300025981 Bacteria 6966
122 Ga0207658_10000137 3300025986 Bacteria 77129
123 Ga0207639_10018661 3300026041 Bacteria 4932
124 Ga0207639_10027025 3300026041 Bacteria 4175
125 Ga0207678_10000095 3300026067 Bacteria 73553
126 Ga0207702_10000981 3300026078 Bacteria 29213
127 Ga0207641_10000049 3300026088 Bacteria 177222
128 Ga0207641_10022797 3300026088 Bacteria 5154
129 Ga0207676_10000304 3300026095 Bacteria 42178
130 Ga0207674_10018773 3300026116 Bacteria 7503
131 Ga0207674_10046946 3300026116 Bacteria 4431
132 Ga0207675_100000137 3300026118 Bacteria 62412
133 Ga0207675_100007671 3300026118 Bacteria 10186
134 Ga0209813_10000015 3300027866 Bacteria 83882
135 Ga0268266_10000002 3300028379 Bacteria 3059047
136 Ga0268264_10000071 3300028381 Bacteria 267236
137 Ga0268264_10013883 3300028381 Bacteria 6622
138 Ga0307412_10031008 3300031911 Bacteria 3372
139 Ga0307414_10032549 3300032004 Bacteria 3434
140 Ga0395900_0088367 3300037418 Bacteria 3186
141 Ga0395905_0049102 3300037471 Bacteria 3954
142 Ga0439461_0000027 3300041410 Bacteria 18688
143 Ga0439461_0000611 3300041410 Bacteria 5151
144 Ga0439465_0000555 3300041413 Bacteria 11222
145 Ga0451802_1229496 3300041460 Bacteria 6014
146 Ga0451806_268655 3300041462 Bacteria 6521
147 Ga0451807_0656318 3300041486 Bacteria 4791
148 Ga0439431_0003581 3300041997 Bacteria 3424
149 Ga0439431_0004232 3300041997 Bacteria 3149
150 Ga0439445_0000215 3300042004 Bacteria 10615
151 Ga0439445_0000241 3300042004 Bacteria 10317
152 Ga0439432_001055 3300042006 Bacteria 10477
153 Ga0439432_001358 3300042006 Bacteria 9256
154 Ga0439462_0000252 3300042015 Bacteria 9594
155 Ga0439462_0001825 3300042015 Bacteria 4826
156 Ga0439462_0008922 3300042015 Bacteria 2536
157 Ga0439434_0000242 3300042435 Bacteria 15222
158 Ga0439434_0001210 3300042435 Bacteria 7426
159 Ga0439434_0004665 3300042435 Bacteria 4017
160 Ga0495627_000036 3300046453 Bacteria 205589
161 Ga0495638_0000014 3300046460 Bacteria 417060
162 Ga0495638_0000048 3300046460 Bacteria 209787
163 Ga0495638_0000758 3300046460 Bacteria 34400
164 Ga0495638_0041807 3300046460 Bacteria 2898
165 Ga0495650_0003174 3300046471 Bacteria 12259
166 Ga0495583_0000175 3300046506 Bacteria 108912
167 Ga0495583_0001147 3300046506 Bacteria 28828
168 Ga0495606_0001464 3300046507 Bacteria 31526
169 Ga0495610_0000278 3300046512 Bacteria 53529
170 Ga0495616_0000216 3300046513 Bacteria 48001
171 Ga0495632_0000325 3300046519 Bacteria 45939
172 Ga0495632_0000357 3300046519 Bacteria 43422
173 Ga0495637_0000782 3300046520 Bacteria 21373
174 Ga0495637_0011205 3300046520 Bacteria 4314
175 Ga0495643_0000009 3300046522 Bacteria 344767
176 Ga0495648_0000976 3300046524 Bacteria 29504
177 Ga0495648_0024164 3300046524 Bacteria 4147
178 Ga0495663_0000003 3300046525 Bacteria 362694
179 Ga0495654_0013435 3300046530 Bacteria 4383
180 Ga0495654_0035324 3300046530 Bacteria 2518
181 Ga0495633_0000102 3300046558 Bacteria 115655
182 Ga0495633_0001754 3300046558 Bacteria 16102
183 Ga0495633_0027878 3300046558 Bacteria 2756
184 Ga0495625_0000031 3300046660 Bacteria 238193
185 Ga0495670_0000036 3300046691 Bacteria 78512
186 Ga0495670_0019028 3300046691 Bacteria 3384
187 Ga0495671_0000013 3300046692 Bacteria 344767
188 Ga0495671_0000403 3300046692 Bacteria 35087
189 Ga0495673_0000842 3300047469 Bacteria 28505
190 Ga0495681_0000099 3300047470 Bacteria 75808
191 Ga0495681_0015129 3300047470 Bacteria 4378
192 Ga0495681_0025824 3300047470 Bacteria 3069
193 Ga0495686_0000876 3300047472 Bacteria 38353
194 Ga0495686_0005936 3300047472 Bacteria 9504
195 Ga0495686_0013001 3300047472 Bacteria 5798
196 Ga0495686_0013931 3300047472 Bacteria 5561
197 Ga0496111_0012574 3300048914 Bacteria 5736
198 Ga0496115_0000522 3300048918 Bacteria 29892
199 Ga0496116_0024084 3300048919 Bacteria 4511
200 Ga0496116_0083847 3300048919 Bacteria 1965
201 Ga0496121_0000065 3300048924 Bacteria 269310
202 Ga0496122_0001355 3300048925 Bacteria 39961
203 Ga0496122_0020889 3300048925 Bacteria 5887
204 Ga0496123_0003882 3300048926 Bacteria 16264
205 Ga0496123_0025343 3300048926 Bacteria 4473
206 Ga0496123_0035754 3300048926 Bacteria 3534
207 Ga0496124_0000817 3300048927 Bacteria 50627
208 Ga0496124_0001193 3300048927 Bacteria 40502
209 Ga0496124_0011535 3300048927 Bacteria 8819
210 Ga0496124_0011958 3300048927 Bacteria 8636
211 Ga0496124_0014757 3300048927 Bacteria 7539
212 Ga0496125_0000425 3300048928 Bacteria 78294
213 Ga0496126_0050770 3300048929 Bacteria 3779
214 Ga0501290_000269 3300049513 Bacteria 8542
215 Ga0501292_000001 3300049515 Bacteria 211592
216 Ga0501223_000096 3300049663 Bacteria 25352
217 Ga0501257_000019 3300049686 Bacteria 47149
218 Ga0501261_000040 3300049690 Bacteria 25841
219 Ga0501225_0000143 3300049705 Bacteria 21691
220 Ga0501225_0001769 3300049705 Bacteria 6758
221 Ga0501225_0004292 3300049705 Bacteria 4262
222 Ga0501225_0005091 3300049705 Bacteria 3873
223 Ga0501279_000001 3300049775 Bacteria 299671
224 Ga0501280_000041 3300049776 Bacteria 37942
225 Ga0501281_00006 3300049777 Bacteria 33972
226 nmdc:mga06z11_65_c1 3300050494 Bacteria 43959
227 nmdc:mga04h51_33_c1 3300050495 Bacteria 47817
228 Ga0500643_000190 3300053087 Bacteria 58677
229 Ga0500643_000538 3300053087 Bacteria 26517
230 Ga0500566_0000251 3300053094 Bacteria 28795
231 Ga0500555_000120 3300053103 Bacteria 37499
232 Ga0500562_004216 3300053108 Bacteria 3634
233 Ga0500592_000157 3300053116 Bacteria 13700
234 Ga0500592_000524 3300053116 Bacteria 6315
235 Ga0500595_000725 3300053119 Bacteria 19606
236 Ga0500658_0000303 3300053134 Bacteria 22200
237 Ga0500658_0000405 3300053134 Bacteria 18718
238 Ga0500658_0001656 3300053134 Bacteria 8862
239 Ga0500658_0002105 3300053134 Bacteria 7743
240 Ga0500573_0000040 3300053140 Bacteria 105074
241 Ga0500624_000018 3300053157 Bacteria 131677
242 Ga0500624_001105 3300053157 Bacteria 5072
243 Ga0500627_0000247 3300053158 Bacteria 15427
244 Ga0500627_0006040 3300053158 Bacteria 4083
245 Ga0500636_0020146 3300053177 Bacteria 3946
246 Ga0500645_010010 3300053730 Bacteria 3158
247 Ga0500661_001695 3300055283 Bacteria 4147
248 2512645374 2512564014 Bacteria 4639632
249 2600228036 2599185359 Bacteria 4772316
250 2644125419 2643221622 Bacteria 4212502
251 2644128650 2643221622 Bacteria 4212502
252 2778126188 2775507255 Bacteria 3945731
253 2819714487 2818991466 Bacteria 4748179
254 2830079022 2830075706 Bacteria 3855215
255 2879165858 2879163058 Bacteria 4223965
256 2885430841 2885429604 Bacteria 3642894
257 2928030327 2928027323 Bacteria 4382488
258 2928530703 2928526807 Bacteria 4760224
259 2928968507 2928968154 Bacteria 4633371
260 2946788334 2946787523 Bacteria 4366789
261 2984558904 2984555340 Bacteria 4247089
262 2984566582 2984564862 Bacteria 4339992
263 2990266653 2990265787 Bacteria 3943888
264 2993357778 2993356040 Bacteria 4247105
265 2993695546 2993693658 Bacteria 4040749
266 8057101626 8057101203 Bacteria 5034064
267 Ga0065165_1005276
268 JGI24736J21556_1001855
269 JGI24741J21665_1001264
270 JGI24752J21851_1001535
271 JGI24740J21852_10003760
272 JGI24739J22299_10000898
273 JGI24739J22299_10002135
274 JGI24739J22299_10003919
275 JGI24737J22298_10001055
276 JGI24737J22298_10006048
277 JGI24735J21928_10001582
278 JGI24735J21928_10006448
279 JGI24738J21930_10000369
280 JGI25150J39212_1000798
281 JGI25150J39212_1001047
282 JGI25153J46596_10000027
283 JGI25153J46596_10000535
284 Ga0055526_1001270
285 Ga0055526_1001321
286 Ga0055537_1000482
287 Ga0055537_1005084
288 Ga0055524_1000081
289 Ga0055524_1000165
290 Ga0055530_10000084
291 Ga0055530_10005398
292 Ga0055540_1000884
293 Ga0055540_1001052
294 Ga0055531_10000090
295 Ga0055531_10004776
296 Ga0055531_10013341
297 Ga0065165_1003170
298 Ga0065165_1011697
299 Ga0070670_100011742
300 Ga0070670_100067075
301 Ga0070666_10000664
302 Ga0070668_100009929
303 Ga0070669_100000001
304 Ga0070671_100000007
305 Ga0070667_100000232
306 Ga0070663_100031330
307 Ga0068853_100009016
308 Ga0070665_100000043
309 Ga0070665_100009931
310 Ga0070664_100028113
311 Ga0068854_100008016
312 Ga0068856_100001038
313 Ga0068859_100001637
314 Ga0068859_100012049
315 Ga0068864_100000323
316 Ga0068861_100003719
317 Ga0068861_100007015
318 Ga0068851_10026682
319 Ga0068863_100000029
320 Ga0068863_100062515
321 Ga0068858_100002506
322 Ga0068860_100027977
323 Ga0068862_100023922
324 Ga0081455_10000220
325 Ga0081539_10015064
326 Ga0075366_10001360
327 Ga0097620_100001637
328 Ga0097620_100012049
329 Ga0105247_10009946
330 Ga0105243_10047792
331 Ga0105241_10004643
332 Ga0105248_10002018
333 Ga0105249_10024063
334 Ga0105148_100118
335 Ga0105239_10080230
336 Ga0157369_10047319
337 Ga0157378_10034683
338 Ga0163162_10106390
339 Ga0183363_1008
340 Ga0209147_100992
341 Ga0207425_1000005
342 Ga0207425_1000094
343 Ga0207425_1001706
344 Ga0209129_1000228
345 Ga0209565_1000007
346 Ga0209565_1000012
347 Ga0209565_1000180
348 Ga0209565_1000386
349 Ga0209676_1001342
350 Ga0209025_1000515
351 Ga0209025_1000727
352 Ga0209564_1000680
353 Ga0209564_1002114
354 Ga0209758_1000002
355 Ga0209758_1000108
356 Ga0209758_1005222
357 Ga0209050_1000001
358 Ga0209050_1000051
359 Ga0209050_1000342
360 Ga0209050_1009035
361 Ga0209256_1000008
362 Ga0209256_1000012
363 Ga0209051_1000226
364 Ga0209051_1000999
365 Ga0209257_1000028
366 Ga0209257_1001517
367 Ga0209257_1001522
368 Ga0209257_1002018
369 Ga0209257_1007904
370 Ga0209257_1011412
371 Ga0209257_1016770
372 Ga0207697_10000248
373 Ga0207710_10002467
374 Ga0207680_10000390
375 Ga0207647_10000783
376 Ga0207647_10032139
377 Ga0207654_10014666
378 Ga0207671_10024369
379 Ga0207681_10000002
380 Ga0207650_10001327
381 Ga0207644_10000002
382 Ga0207711_10003255
383 Ga0207667_10025973
384 Ga0207712_10034595
385 Ga0207668_10005568
386 Ga0207668_10006816
387 Ga0207640_10005401
388 Ga0207658_10000137
389 Ga0207639_10018661
390 Ga0207639_10027025
391 Ga0207678_10000095
392 Ga0207702_10000981
393 Ga0207641_10000049
394 Ga0207641_10022797
395 Ga0207676_10000304
396 Ga0207674_10018773
397 Ga0207674_10046946
398 Ga0207675_100000137
399 Ga0207675_100007671
400 Ga0209813_10000015
401 Ga0268266_10000002
402 Ga0268264_10000071
403 Ga0268264_10013883
404 Ga0307412_10031008
405 Ga0307414_10032549
406 Ga0395900_0088367
407 Ga0395905_0049102
408 Ga0439461_0000027
409 Ga0439461_0000611
410 Ga0439465_0000555
411 Ga0451802_1229496
412 Ga0451806_268655
413 Ga0451807_0656318
414 Ga0439431_0003581
415 Ga0439431_0004232
416 Ga0439445_0000215
417 Ga0439445_0000241
418 Ga0439432_001055
419 Ga0439432_001358
420 Ga0439462_0000252
421 Ga0439462_0001825
422 Ga0439462_0008922
423 Ga0439434_0000242
424 Ga0439434_0001210
425 Ga0439434_0004665
426 Ga0495627_000036
427 Ga0495638_0000014
428 Ga0495638_0000048
429 Ga0495638_0000758
430 Ga0495638_0041807
431 Ga0495650_0003174
432 Ga0495583_0000175
433 Ga0495583_0001147
434 Ga0495606_0001464
435 Ga0495610_0000278
436 Ga0495616_0000216
437 Ga0495632_0000325
438 Ga0495632_0000357
439 Ga0495637_0000782
440 Ga0495637_0011205
441 Ga0495643_0000009
442 Ga0495648_0000976
443 Ga0495648_0024164
444 Ga0495663_0000003
445 Ga0495654_0013435
446 Ga0495654_0035324
447 Ga0495633_0000102
448 Ga0495633_0001754
449 Ga0495633_0027878
450 Ga0495625_0000031
451 Ga0495670_0000036
452 Ga0495670_0019028
453 Ga0495671_0000013
454 Ga0495671_0000403
455 Ga0495673_0000842
456 Ga0495681_0000099
457 Ga0495681_0015129
458 Ga0495681_0025824
459 Ga0495686_0000876
460 Ga0495686_0005936
461 Ga0495686_0013001
462 Ga0495686_0013931
463 Ga0496111_0012574
464 Ga0496115_0000522
465 Ga0496116_0024084
466 Ga0496116_0083847
467 Ga0496121_0000065
468 Ga0496122_0001355
469 Ga0496122_0020889
470 Ga0496123_0003882
471 Ga0496123_0025343
472 Ga0496123_0035754
473 Ga0496124_0000817
474 Ga0496124_0001193
475 Ga0496124_0011535
476 Ga0496124_0011958
477 Ga0496124_0014757
478 Ga0496125_0000425
479 Ga0496126_0050770
480 Ga0501290_000269
481 Ga0501292_000001
482 Ga0501223_000096
483 Ga0501257_000019
484 Ga0501261_000040
485 Ga0501225_0000143
486 Ga0501225_0001769
487 Ga0501225_0004292
488 Ga0501225_0005091
489 Ga0501279_000001
490 Ga0501280_000041
491 Ga0501281_00006
492 nmdc:mga06z11_65_c1
493 nmdc:mga04h51_33_c1
494 Ga0500643_000190
495 Ga0500643_000538
496 Ga0500566_0000251
497 Ga0500555_000120
498 Ga0500562_004216
499 Ga0500592_000157
500 Ga0500592_000524
501 Ga0500595_000725
502 Ga0500658_0000303
503 Ga0500658_0000405
504 Ga0500658_0001656
505 Ga0500658_0002105
506 Ga0500573_0000040
507 Ga0500624_000018
508 Ga0500624_001105
509 Ga0500627_0000247
510 Ga0500627_0006040
511 Ga0500636_0020146
512 Ga0500645_010010
513 Ga0500661_001695
514 2512645374
515 2600228036
516 2644125419
517 2644128650
518 2778126188
519 2819714487
520 2830079022
521 2879165858
522 2885430841
523 2928030327
524 2928530703
525 2928968507
526 2946788334
527 2984558904
528 2984566582
529 2990266653
530 2993357778
531 2993695546
532 8057101626

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07715

Plug

TonB-dependent Receptor Plug Domain

66

172

0.95

PF14905

OMP_b-brl_3

Outer membrane protein beta-barrel family

418

713

0.79

PF00593

TonB_dep_Rec_b-barrel

TonB dependent receptor-like, beta-barrel

272

697

0.76

Structural Annotation

Top 5 Hits

ID Description Score Start End
4rvw-assembly1.cif.gz_A structure of the bacterial zn-transporter znud from neisseria meningitidis (soaked with 20 micromolar zinc) 0.9239 59 704
4rvw-assembly1.cif.gz_A structure of the bacterial zn-transporter znud from neisseria meningitidis (soaked with 20 micromolar zinc) 0.9062 59 704
4rdt-assembly1.cif.gz_A structure of the bacterial zn-transporter znud from neisseria meningitidis (flexible conformation bound to a zinc ion) 0.8777 50 704
4rdt-assembly2.cif.gz_B structure of the bacterial zn-transporter znud from neisseria meningitidis (flexible conformation bound to a zinc ion) 0.8764 50 704
4rdt-assembly1.cif.gz_A structure of the bacterial zn-transporter znud from neisseria meningitidis (flexible conformation bound to a zinc ion) 0.8764 50 704
ID Description Score Start End Superfamily
3fhhA02 Mainly Beta;Beta Barrel;Maltoporin; Chain A;TonB-dependent receptor, beta-barrel domain 0.8188 167 704 2.40.170.20
3fhhA02 Mainly Beta;Beta Barrel;Maltoporin; Chain A;TonB-dependent receptor, beta-barrel domain 0.8111 167 704 2.40.170.20
4rdrA01 Mainly Beta;Beta Complex;Ferric Hydroxamate Uptake Protein; Chain A, domain 1;TonB-dependent receptor, plug domain 0.8108 49 168 2.170.130.10
3rgnA02 Mainly Beta;Beta Barrel;Maltoporin; Chain A;TonB-dependent receptor, beta-barrel domain 0.8024 169 704 2.40.170.20
3rgnA02 Mainly Beta;Beta Barrel;Maltoporin; Chain A;TonB-dependent receptor, beta-barrel domain 0.8006 169 704 2.40.170.20
ID Description Score Start End GO Terms
AF-A0A4Q2YUM5-F1-model_v4 TonB-dependent receptor 0.9205 112 665 GO:0009279
GO:0015344
AF-A0A4Q2YUM5-F1-model_v4 TonB-dependent receptor 0.9155 112 665 GO:0009279
GO:0015344
AF-A0A3D2SNF0-F1-model_v4 TonB-dependent receptor 0.9022 395 577 GO:0009279
GO:0015344
AF-A0A7W3U9B2-F1-model_v4 deleted 0.8955 54 704
AF-A0A3D2SNF0-F1-model_v4 TonB-dependent receptor 0.892 395 577 GO:0009279
GO:0015344

Map