F374649

General Info

Members Datasets Scaffolds Average Seq Length
267 177 534 170

Family's Representative Sequence

Representative Sequence 3300005616|Ga0068852_100000012|Ga0068852_100000012132
Length 195
Sequence MPLPFVPYYTTRIMKSNSKVIKLTGNSYAVLALLEQFGESTSYDIKQAIELSIQNFWPVPHTTAYEEPARLAAAGYLSVRQEEEGRRRRFYSLTEKGHEALAAWAADPEVAPPQLREEAILKVFAGGAPGPLVDSRRAWHEAKREELAAMLREVRESGDSSFAASERTLMTGVGYHQKMLELMDLLSEGGASGSD

Samples

Sample ID Description Type Environment
1 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
2 3300003659 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
10 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
11 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
12 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
15 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
16 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
17 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
18 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
19 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
20 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
21 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
22 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
23 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
24 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
25 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
26 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
27 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
28 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
29 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
30 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
31 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
32 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
33 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
34 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
35 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
36 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
37 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
38 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
39 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
40 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
41 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
42 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
43 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
44 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
45 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
46 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
47 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
48 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
49 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
50 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
51 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
52 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
83 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
84 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
85 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
86 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
87 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
88 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
89 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
90 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
91 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
92 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
93 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
94 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
95 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
96 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
97 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
98 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
99 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
100 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
101 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
102 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
103 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
104 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
105 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
106 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
107 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
108 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
109 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
110 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
111 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
112 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
113 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
114 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
115 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
116 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
117 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
118 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
119 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
120 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
121 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
122 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
123 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
124 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
125 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
126 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
127 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
128 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
129 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
130 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
131 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
132 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
133 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
134 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
135 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
136 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
137 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
138 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
139 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
140 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
141 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
142 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
143 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
148 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
149 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
151 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
152 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
153 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
156 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
157 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
158 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
159 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
160 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
161 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
162 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
163 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
164 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
165 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
166 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
167 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
168 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
169 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
170 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
171 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
172 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
173 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
174 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
175 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
176 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
177 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.25
Metatranscriptomes 0.75
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.37
Nodule 0
Rhizoplane 10.49
Rhizosphere 82.4
Stem 0
Stem Tuber 0
Unclassified 9.74

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068852_100000012 3300005616 Bacteria 140734
2 JGI25404J52841_10003599 3300003659 Bacteria 3076
3 Ga0070658_10868592 3300005327 Bacteria 784
4 Ga0070683_100018633 3300005329 Bacteria 6152
5 Ga0070683_100057039 3300005329 Unclassified 3628
6 Ga0070666_10011091 3300005335 Bacteria 5648
7 Ga0070666_10019047 3300005335 Bacteria 4425
8 Ga0070666_10046278 3300005335 Bacteria 2917
9 Ga0070680_100321668 3300005336 Unclassified 1313
10 Ga0070682_100000080 3300005337 Bacteria 85683
11 Ga0070689_100039557 3300005340 Bacteria 3611
12 Ga0070661_100000005 3300005344 Bacteria 220455
13 Ga0070692_10036029 3300005345 Bacteria 2509
14 Ga0070674_100757753 3300005356 Unclassified 835
15 Ga0070688_100002150 3300005365 Bacteria 9926
16 Ga0070688_100080637 3300005365 Bacteria 2105
17 Ga0070659_100040715 3300005366 Bacteria 3631
18 Ga0070667_100932816 3300005367 Bacteria 809
19 Ga0070714_100216832 3300005435 Bacteria 1757
20 Ga0070714_100569980 3300005435 Unclassified 1085
21 Ga0070711_100030587 3300005439 Bacteria 3566
22 Ga0070663_100000351 3300005455 Bacteria 24141
23 Ga0070663_100153694 3300005455 Bacteria 1767
24 Ga0070678_100031711 3300005456 Bacteria 3650
25 Ga0070685_10000293 3300005466 Bacteria 31562
26 Ga0070679_100000621 3300005530 Bacteria 30165
27 Ga0070684_100005205 3300005535 Bacteria 9946
28 Ga0068853_100146689 3300005539 Bacteria 2121
29 Ga0070665_100038015 3300005548 Bacteria 4838
30 Ga0070665_100100911 3300005548 Bacteria 2890
31 Ga0070665_101546504 3300005548 Unclassified 671
32 Ga0070704_100278718 3300005549 Bacteria 1384
33 Ga0068857_100257390 3300005577 Bacteria 1601
34 Ga0068854_100001309 3300005578 Bacteria 15008
35 Ga0068856_100001818 3300005614 Bacteria 22286
36 Ga0068856_100133278 3300005614 Bacteria 2490
37 Ga0068851_10000988 3300005834 Bacteria 12307
38 Ga0068851_10003390 3300005834 Bacteria 7091
39 Ga0068858_100000049 3300005842 Bacteria 122693
40 Ga0081540_1000006 3300005983 Bacteria 208724
41 Ga0081540_1145630 3300005983 Bacteria 943
42 Ga0070715_10026988 3300006163 Bacteria 2290
43 Ga0097621_100906259 3300006237 Bacteria 821
44 Ga0075433_10005502 3300006852 Bacteria 9947
45 Ga0068865_100000017 3300006881 Bacteria 109636
46 Ga0105245_10000056 3300009098 Bacteria 124109
47 Ga0105245_10000290 3300009098 Bacteria 47991
48 Ga0105245_10001521 3300009098 Bacteria 20984
49 Ga0105245_10001677 3300009098 Bacteria 20157
50 Ga0105245_11061766 3300009098 Bacteria 855
51 Ga0105247_10376990 3300009101 Bacteria 1005
52 Ga0105247_10736644 3300009101 Bacteria 746
53 Ga0105242_10394408 3300009176 Bacteria 1290
54 Ga0105248_10000032 3300009177 Bacteria 201114
55 Ga0105237_10255539 3300009545 Bacteria 1754
56 Ga0105249_10000073 3300009553 Bacteria 145660
57 Ga0105249_10812741 3300009553 Bacteria 999
58 Ga0157371_10041322 3300013102 Bacteria 3291
59 Ga0157370_10007487 3300013104 Bacteria 11859
60 Ga0157370_10069932 3300013104 Bacteria 3315
61 Ga0157369_10000099 3300013105 Bacteria 120032
62 Ga0157374_10375422 3300013296 Bacteria 1416
63 Ga0157372_10000473 3300013307 Bacteria 44380
64 Ga0157375_10773202 3300013308 Bacteria 1110
65 Ga0157375_10900304 3300013308 Bacteria 1029
66 Ga0157375_11174335 3300013308 Bacteria 900
67 Ga0157380_10000219 3300014326 Bacteria 34156
68 Ga0157379_10009092 3300014968 Bacteria 8658
69 Ga0157379_10065239 3300014968 Bacteria 3255
70 Ga0157379_10721694 3300014968 Bacteria 937
71 Ga0157376_10013595 3300014969 Bacteria 6080
72 Ga0157376_10023389 3300014969 Bacteria 4835
73 Ga0206356_11233353 3300020070 Bacteria 2347
74 Ga0206354_10095362 3300020081 Bacteria 1181
75 Ga0207656_10000559 3300025321 Bacteria 12340
76 Ga0207656_10008156 3300025321 Bacteria 3846
77 Ga0207692_10326264 3300025898 Bacteria 941
78 Ga0207710_10264787 3300025900 Bacteria 862
79 Ga0207680_10002095 3300025903 Bacteria 9346
80 Ga0207680_10008327 3300025903 Bacteria 5082
81 Ga0207680_10019278 3300025903 Bacteria 3645
82 Ga0207685_10031108 3300025905 Bacteria 1907
83 Ga0207705_10050776 3300025909 Bacteria 2986
84 Ga0207663_10023469 3300025916 Bacteria 3540
85 Ga0207660_10238820 3300025917 Unclassified 1431
86 Ga0207649_10000005 3300025920 Bacteria 356179
87 Ga0207652_10000523 3300025921 Bacteria 38967
88 Ga0207687_10000007 3300025927 Bacteria 604185
89 Ga0207687_10000646 3300025927 Bacteria 23464
90 Ga0207687_10000970 3300025927 Bacteria 19492
91 Ga0207700_10000008 3300025928 Bacteria 341717
92 Ga0207700_10000016 3300025928 Bacteria 202434
93 Ga0207700_10999113 3300025928 Unclassified 749
94 Ga0207664_10112580 3300025929 Bacteria 2266
95 Ga0207664_10403599 3300025929 Unclassified 1216
96 Ga0207644_10300789 3300025931 Bacteria 1293
97 Ga0207690_10006610 3300025932 Bacteria 6867
98 Ga0207669_10637298 3300025937 Unclassified 870
99 Ga0207704_10000025 3300025938 Bacteria 135523
100 Ga0207711_10000020 3300025941 Bacteria 363325
101 Ga0207661_10010971 3300025944 Bacteria 6543
102 Ga0207661_10074099 3300025944 Unclassified 2790
103 Ga0207712_10000003 3300025961 Bacteria 615314
104 Ga0207640_10000137 3300025981 Bacteria 54133
105 Ga0207658_10034550 3300025986 Bacteria 3614
106 Ga0207658_11171468 3300025986 Bacteria 702
107 Ga0207703_10000067 3300026035 Bacteria 125623
108 Ga0207639_10001160 3300026041 Bacteria 17875
109 Ga0207639_10118736 3300026041 Bacteria 2169
110 Ga0207678_10000445 3300026067 Bacteria 37602
111 Ga0207678_10266960 3300026067 Bacteria 1467
112 Ga0207702_10000016 3300026078 Bacteria 226633
113 Ga0207674_10279364 3300026116 Bacteria 1618
114 Ga0207683_10005133 3300026121 Bacteria 11241
115 Ga0207698_10000012 3300026142 Bacteria 260061
116 Ga0268266_10000023 3300028379 Bacteria 501899
117 Ga0268266_10000553 3300028379 Bacteria 52199
118 Ga0268266_10003282 3300028379 Bacteria 16272
119 Ga0451853_3352223 3300041512 Unclassified 1309
120 Ga0466963_0043183 3300044694 Bacteria 2963
121 Ga0466957_0003292 3300044842 Bacteria 8849
122 Ga0466957_0229072 3300044842 Unclassified 1230
123 Ga0466958_0011398 3300045836 Bacteria 5008
124 Ga0466967_0000344 3300045976 Bacteria 21424
125 Ga0466967_1133859 3300045976 Archaea 779
126 Ga0495603_0017884 3300046455 Bacteria 4290
127 Ga0495591_084337 3300046458 Bacteria 805
128 Ga0495629_0017940 3300046459 Bacteria 5073
129 Ga0495629_0675296 3300046459 Bacteria 687
130 Ga0495641_0001080 3300046461 Bacteria 23509
131 Ga0495641_0022727 3300046461 Bacteria 3132
132 Ga0495641_0046674 3300046461 Bacteria 1991
133 Ga0495641_0047007 3300046461 Unclassified 1982
134 Ga0495651_0278379 3300046462 Bacteria 1131
135 Ga0495585_0145089 3300046492 Bacteria 1241
136 Ga0495594_0000013 3300046499 Bacteria 103201
137 Ga0495606_0000211 3300046507 Bacteria 103386
138 Ga0495608_0000208 3300046511 Bacteria 42275
139 Ga0495628_0199574 3300046516 Bacteria 1508
140 Ga0495630_0000025 3300046517 Bacteria 152364
141 Ga0495630_0058050 3300046517 Bacteria 2901
142 Ga0495630_0128363 3300046517 Bacteria 1925
143 Ga0495587_0001931 3300046536 Bacteria 13803
144 Ga0495587_0550554 3300046536 Bacteria 637
145 Ga0495645_0017534 3300046543 Bacteria 5129
146 Ga0495622_0000014 3300046557 Bacteria 182142
147 Ga0495634_0000592 3300046642 Bacteria 35197
148 Ga0495588_0000311 3300046674 Bacteria 33416
149 Ga0495657_0000406 3300046675 Bacteria 40241
150 Ga0495647_0000289 3300046681 Bacteria 14023
151 Ga0495658_0010179 3300046683 Bacteria 4701
152 Ga0495669_0000131 3300046684 Bacteria 47864
153 Ga0495613_0000309 3300046689 Bacteria 44163
154 Ga0495613_0608957 3300046689 Bacteria 726
155 Ga0495624_0000028 3300046690 Bacteria 93474
156 Ga0495624_0000686 3300046690 Bacteria 26537
157 Ga0495649_0022658 3300046694 Bacteria 3514
158 Ga0495600_0005634 3300046809 Bacteria 7565
159 Ga0495604_0000013 3300047317 Bacteria 234578
160 Ga0495604_0007944 3300047317 Bacteria 8404
161 Ga0495604_0370012 3300047317 Bacteria 949
162 Ga0495672_0144366 3300047320 Bacteria 1240
163 Ga0495676_0000809 3300047321 Bacteria 26167
164 Ga0495676_0059751 3300047321 Unclassified 2992
165 Ga0495680_0000421 3300047322 Bacteria 47432
166 Ga0495675_0002624 3300047444 Bacteria 10770
167 Ga0495679_008053 3300047446 Bacteria 4324
168 Ga0495686_0314148 3300047472 Unclassified 861
169 Ga0495602_0000228 3300048088 Bacteria 52649
170 Ga0495602_0127119 3300048088 Bacteria 2040
171 Ga0495602_0658815 3300048088 Unclassified 714
172 Ga0496100_0000016 3300048903 Bacteria 166058
173 Ga0496100_0016772 3300048903 Bacteria 4308
174 Ga0496101_0000038 3300048904 Bacteria 166058
175 Ga0496102_0376965 3300048905 Bacteria 1335
176 Ga0496103_0029910 3300048906 Bacteria 3312
177 Ga0496103_0042175 3300048906 Bacteria 2807
178 Ga0496103_0067829 3300048906 Bacteria 2228
179 Ga0496104_0000003 3300048907 Bacteria 669219
180 Ga0496104_0030652 3300048907 Bacteria 4999
181 Ga0496104_0179534 3300048907 Bacteria 2027
182 Ga0496105_0000008 3300048908 Bacteria 335652
183 Ga0496105_0000848 3300048908 Bacteria 20845
184 Ga0496106_0000027 3300048909 Bacteria 149560
185 Ga0496106_0488631 3300048909 Bacteria 989
186 Ga0496107_0000003 3300048910 Bacteria 304038
187 Ga0496107_0990102 3300048910 Bacteria 610
188 Ga0496108_0000045 3300048911 Bacteria 137416
189 Ga0496108_0021107 3300048911 Bacteria 5351
190 Ga0496109_0000032 3300048912 Bacteria 162984
191 Ga0496109_0000252 3300048912 Bacteria 51599
192 Ga0496109_0288492 3300048912 Bacteria 1547
193 Ga0496110_0000386 3300048913 Bacteria 29667
194 Ga0496110_0187863 3300048913 Bacteria 1876
195 Ga0496110_0724602 3300048913 Bacteria 897
196 Ga0496111_0000225 3300048914 Bacteria 26948
197 Ga0496112_0000362 3300048915 Bacteria 29649
198 Ga0496113_0000127 3300048916 Bacteria 33059
199 Ga0496114_0032906 3300048917 Bacteria 4270
200 Ga0496116_0000447 3300048919 Bacteria 57650
201 Ga0496117_0001787 3300048920 Bacteria 29372
202 Ga0496118_0000971 3300048921 Bacteria 44781
203 Ga0496118_0125108 3300048921 Bacteria 1666
204 Ga0496119_0000432 3300048922 Bacteria 57656
205 Ga0496119_0002987 3300048922 Bacteria 17953
206 Ga0496119_0021819 3300048922 Bacteria 4610
207 Ga0496119_0022620 3300048922 Bacteria 4492
208 Ga0496120_0004598 3300048923 Bacteria 11476
209 Ga0496121_0009948 3300048924 Bacteria 10825
210 Ga0496121_0010860 3300048924 Bacteria 10183
211 Ga0496121_0061094 3300048924 Bacteria 3095
212 Ga0496121_0134892 3300048924 Bacteria 1841
213 Ga0496122_0227126 3300048925 Bacteria 1065
214 Ga0496123_0197932 3300048926 Bacteria 1033
215 Ga0496125_0023368 3300048928 Bacteria 5707
216 Ga0496125_0032004 3300048928 Bacteria 4678
217 Ga0501031_0011404 3300049568 Bacteria 5786
218 Ga0501032_0013973 3300049569 Bacteria 5696
219 Ga0501033_0002182 3300049570 Bacteria 16893
220 Ga0501034_0026016 3300049571 Bacteria 5960
221 Ga0501036_0019236 3300049572 Bacteria 5729
222 Ga0501037_0015089 3300049573 Bacteria 5681
223 Ga0501038_0047373 3300049574 Bacteria 3723
224 Ga0501039_0016002 3300049575 Bacteria 5744
225 Ga0501042_0073040 3300049578 Unclassified 2454
226 Ga0501043_0017752 3300049579 Bacteria 5578
227 Ga0501043_0064733 3300049579 Bacteria 2871
228 Ga0501046_0018485 3300049580 Bacteria 5798
229 Ga0501047_0002662 3300049581 Bacteria 16994
230 Ga0501047_0022089 3300049581 Bacteria 6112
231 Ga0501047_0026105 3300049581 Bacteria 5618
232 Ga0501047_0165290 3300049581 Unclassified 2083
233 Ga0501048_0015101 3300049582 Bacteria 5706
234 Ga0501067_0055503 3300049583 Unclassified 2195
235 Ga0501068_0022145 3300049584 Bacteria 3713
236 Ga0501069_0012803 3300049585 Bacteria 4465
237 Ga0501069_0042535 3300049585 Unclassified 2513
238 Ga0501070_0002268 3300049586 Bacteria 16901
239 Ga0501072_0017794 3300049588 Bacteria 5465
240 Ga0501073_0003176 3300049589 Bacteria 12327
241 Ga0501074_0016275 3300049590 Bacteria 5400
242 Ga0501074_0032533 3300049590 Bacteria 3778
243 Ga0501074_0050817 3300049590 Unclassified 2992
244 Ga0501079_0017114 3300049741 Bacteria 5536
245 Ga0501079_0264791 3300049741 Unclassified 1343
246 Ga0501079_0522592 3300049741 Bacteria 933
247 Ga0501080_0094264 3300049742 Unclassified 2780
248 Ga0501083_0035624 3300049744 Bacteria 3398
249 Ga0501083_0049094 3300049744 Unclassified 2846
250 Ga0501035_0002777 3300049822 Bacteria 16952
251 Ga0501035_0315212 3300049822 Unclassified 1315
252 Ga0501044_0009059 3300049823 Bacteria 10877
253 Ga0501044_0016674 3300049823 Bacteria 7888
254 Ga0501045_0014626 3300049824 Bacteria 5564
255 nmdc:mga0a205_922_c2 3300050515 Bacteria 12948
256 Ga0495601_0000086 3300053077 Bacteria 50421
257 Ga0495601_0000097 3300053077 Bacteria 48380
258 Ga0495601_0154574 3300053077 Bacteria 1498
259 Ga0495612_0010338 3300053078 Bacteria 3777
260 Ga0495655_0014437 3300053083 Bacteria 1656
261 Ga0495595_0000091 3300053084 Bacteria 42155
262 Ga0495595_0034285 3300053084 Bacteria 2295
263 Ga0495619_0000022 3300053085 Bacteria 184144
264 Ga0495619_0000141 3300053085 Bacteria 53921
265 Ga0500614_000389 3300053123 Bacteria 11425
266 Ga0501084_0216119 3300054114 Archaea 1617
267 Ga0501082_0138832 3300060353 Unclassified 2109
268 Ga0068852_100000012
269 JGI25404J52841_10003599
270 Ga0070658_10868592
271 Ga0070683_100018633
272 Ga0070683_100057039
273 Ga0070666_10011091
274 Ga0070666_10019047
275 Ga0070666_10046278
276 Ga0070680_100321668
277 Ga0070682_100000080
278 Ga0070689_100039557
279 Ga0070661_100000005
280 Ga0070692_10036029
281 Ga0070674_100757753
282 Ga0070688_100002150
283 Ga0070688_100080637
284 Ga0070659_100040715
285 Ga0070667_100932816
286 Ga0070714_100216832
287 Ga0070714_100569980
288 Ga0070711_100030587
289 Ga0070663_100000351
290 Ga0070663_100153694
291 Ga0070678_100031711
292 Ga0070685_10000293
293 Ga0070679_100000621
294 Ga0070684_100005205
295 Ga0068853_100146689
296 Ga0070665_100038015
297 Ga0070665_100100911
298 Ga0070665_101546504
299 Ga0070704_100278718
300 Ga0068857_100257390
301 Ga0068854_100001309
302 Ga0068856_100001818
303 Ga0068856_100133278
304 Ga0068851_10000988
305 Ga0068851_10003390
306 Ga0068858_100000049
307 Ga0081540_1000006
308 Ga0081540_1145630
309 Ga0070715_10026988
310 Ga0097621_100906259
311 Ga0075433_10005502
312 Ga0068865_100000017
313 Ga0105245_10000056
314 Ga0105245_10000290
315 Ga0105245_10001521
316 Ga0105245_10001677
317 Ga0105245_11061766
318 Ga0105247_10376990
319 Ga0105247_10736644
320 Ga0105242_10394408
321 Ga0105248_10000032
322 Ga0105237_10255539
323 Ga0105249_10000073
324 Ga0105249_10812741
325 Ga0157371_10041322
326 Ga0157370_10007487
327 Ga0157370_10069932
328 Ga0157369_10000099
329 Ga0157374_10375422
330 Ga0157372_10000473
331 Ga0157375_10773202
332 Ga0157375_10900304
333 Ga0157375_11174335
334 Ga0157380_10000219
335 Ga0157379_10009092
336 Ga0157379_10065239
337 Ga0157379_10721694
338 Ga0157376_10013595
339 Ga0157376_10023389
340 Ga0206356_11233353
341 Ga0206354_10095362
342 Ga0207656_10000559
343 Ga0207656_10008156
344 Ga0207692_10326264
345 Ga0207710_10264787
346 Ga0207680_10002095
347 Ga0207680_10008327
348 Ga0207680_10019278
349 Ga0207685_10031108
350 Ga0207705_10050776
351 Ga0207663_10023469
352 Ga0207660_10238820
353 Ga0207649_10000005
354 Ga0207652_10000523
355 Ga0207687_10000007
356 Ga0207687_10000646
357 Ga0207687_10000970
358 Ga0207700_10000008
359 Ga0207700_10000016
360 Ga0207700_10999113
361 Ga0207664_10112580
362 Ga0207664_10403599
363 Ga0207644_10300789
364 Ga0207690_10006610
365 Ga0207669_10637298
366 Ga0207704_10000025
367 Ga0207711_10000020
368 Ga0207661_10010971
369 Ga0207661_10074099
370 Ga0207712_10000003
371 Ga0207640_10000137
372 Ga0207658_10034550
373 Ga0207658_11171468
374 Ga0207703_10000067
375 Ga0207639_10001160
376 Ga0207639_10118736
377 Ga0207678_10000445
378 Ga0207678_10266960
379 Ga0207702_10000016
380 Ga0207674_10279364
381 Ga0207683_10005133
382 Ga0207698_10000012
383 Ga0268266_10000023
384 Ga0268266_10000553
385 Ga0268266_10003282
386 Ga0451853_3352223
387 Ga0466963_0043183
388 Ga0466957_0003292
389 Ga0466957_0229072
390 Ga0466958_0011398
391 Ga0466967_0000344
392 Ga0466967_1133859
393 Ga0495603_0017884
394 Ga0495591_084337
395 Ga0495629_0017940
396 Ga0495629_0675296
397 Ga0495641_0001080
398 Ga0495641_0022727
399 Ga0495641_0046674
400 Ga0495641_0047007
401 Ga0495651_0278379
402 Ga0495585_0145089
403 Ga0495594_0000013
404 Ga0495606_0000211
405 Ga0495608_0000208
406 Ga0495628_0199574
407 Ga0495630_0000025
408 Ga0495630_0058050
409 Ga0495630_0128363
410 Ga0495587_0001931
411 Ga0495587_0550554
412 Ga0495645_0017534
413 Ga0495622_0000014
414 Ga0495634_0000592
415 Ga0495588_0000311
416 Ga0495657_0000406
417 Ga0495647_0000289
418 Ga0495658_0010179
419 Ga0495669_0000131
420 Ga0495613_0000309
421 Ga0495613_0608957
422 Ga0495624_0000028
423 Ga0495624_0000686
424 Ga0495649_0022658
425 Ga0495600_0005634
426 Ga0495604_0000013
427 Ga0495604_0007944
428 Ga0495604_0370012
429 Ga0495672_0144366
430 Ga0495676_0000809
431 Ga0495676_0059751
432 Ga0495680_0000421
433 Ga0495675_0002624
434 Ga0495679_008053
435 Ga0495686_0314148
436 Ga0495602_0000228
437 Ga0495602_0127119
438 Ga0495602_0658815
439 Ga0496100_0000016
440 Ga0496100_0016772
441 Ga0496101_0000038
442 Ga0496102_0376965
443 Ga0496103_0029910
444 Ga0496103_0042175
445 Ga0496103_0067829
446 Ga0496104_0000003
447 Ga0496104_0030652
448 Ga0496104_0179534
449 Ga0496105_0000008
450 Ga0496105_0000848
451 Ga0496106_0000027
452 Ga0496106_0488631
453 Ga0496107_0000003
454 Ga0496107_0990102
455 Ga0496108_0000045
456 Ga0496108_0021107
457 Ga0496109_0000032
458 Ga0496109_0000252
459 Ga0496109_0288492
460 Ga0496110_0000386
461 Ga0496110_0187863
462 Ga0496110_0724602
463 Ga0496111_0000225
464 Ga0496112_0000362
465 Ga0496113_0000127
466 Ga0496114_0032906
467 Ga0496116_0000447
468 Ga0496117_0001787
469 Ga0496118_0000971
470 Ga0496118_0125108
471 Ga0496119_0000432
472 Ga0496119_0002987
473 Ga0496119_0021819
474 Ga0496119_0022620
475 Ga0496120_0004598
476 Ga0496121_0009948
477 Ga0496121_0010860
478 Ga0496121_0061094
479 Ga0496121_0134892
480 Ga0496122_0227126
481 Ga0496123_0197932
482 Ga0496125_0023368
483 Ga0496125_0032004
484 Ga0501031_0011404
485 Ga0501032_0013973
486 Ga0501033_0002182
487 Ga0501034_0026016
488 Ga0501036_0019236
489 Ga0501037_0015089
490 Ga0501038_0047373
491 Ga0501039_0016002
492 Ga0501042_0073040
493 Ga0501043_0017752
494 Ga0501043_0064733
495 Ga0501046_0018485
496 Ga0501047_0002662
497 Ga0501047_0022089
498 Ga0501047_0026105
499 Ga0501047_0165290
500 Ga0501048_0015101
501 Ga0501067_0055503
502 Ga0501068_0022145
503 Ga0501069_0012803
504 Ga0501069_0042535
505 Ga0501070_0002268
506 Ga0501072_0017794
507 Ga0501073_0003176
508 Ga0501074_0016275
509 Ga0501074_0032533
510 Ga0501074_0050817
511 Ga0501079_0017114
512 Ga0501079_0264791
513 Ga0501079_0522592
514 Ga0501080_0094264
515 Ga0501083_0035624
516 Ga0501083_0049094
517 Ga0501035_0002777
518 Ga0501035_0315212
519 Ga0501044_0009059
520 Ga0501044_0016674
521 Ga0501045_0014626
522 nmdc:mga0a205_922_c2
523 Ga0495601_0000086
524 Ga0495601_0000097
525 Ga0495601_0154574
526 Ga0495612_0010338
527 Ga0495655_0014437
528 Ga0495595_0000091
529 Ga0495595_0034285
530 Ga0495619_0000022
531 Ga0495619_0000141
532 Ga0500614_000389
533 Ga0501084_0216119
534 Ga0501082_0138832

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03551

PadR

Transcriptional regulator PadR-like family

30

103

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
6r1m-assembly1.cif.gz_B crystal structure of e. coli seryl-trna synthetase complexed to seryl sulfamoyl adenosine 0.9151 117 172
6inr-assembly2.cif.gz_B the crystal structure of phytoplasmal effector causing phyllody symptoms 1 (phyl1) 0.8625 119 181
3voe-assembly1.cif.gz_A crystal structure of wild type marr (apo form) from e.coli 0.8409 8 89
1xma-assembly1.cif.gz_B-2 structure of a transcriptional regulator from clostridium thermocellum cth-833 0.8397 11 90
1cxz-assembly1.cif.gz_B crystal structure of human rhoa complexed with the effector domain of the protein kinase pkn/prk1 0.8397 109 169
ID Description Score Start End Superfamily
af_Q2FYR1_179_367_3.40.630.30 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Gcn5-related N-acetyltransferase (GNAT) 0.9361 119 172 3.40.630.30
3tklB01 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1; 0.9017 119 174 1.20.58.90
5x13A01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8881 10 90 1.10.10.10
3txqG01 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;ESAT-6-like 0.8791 116 174 1.10.287.1060
3l9fD01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8401 12 90 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A537ZVZ2-F1-model_v4 PadR family transcriptional regulator 0.8935 1 87
AF-A0A7V9M4S9-F1-model_v4 PadR family transcriptional regulator 0.8727 1 97
AF-A0A380K492-F1-model_v4 Phenolic acid metabolism transcriptional regulator 0.8685 7 87
AF-A0A537ZVZ2-F1-model_v4 PadR family transcriptional regulator 0.8659 1 87
AF-A0A7V9M4S9-F1-model_v4 PadR family transcriptional regulator 0.8643 1 97

Map