F374801

General Info

Members Datasets Scaffolds Average Seq Length
267 168 534 819

Family's Representative Sequence

Representative Sequence 3300025735|Ga0207713_1005989|Ga0207713_10059896
Length 882
Sequence MIDRPGHEFAFKNIHVGEAEQQQGPKGVAAERDRVPGGAFRGFAFMRKNTVAGRRRPLLAIGLLCCSALTSPAFAEDAAGSADSSDQPADEIVVTGALDALPVKGVGTVFGFDKTVTETPRSVSTVSKQQIERFGVTSIYDLIAQAPGTFTNSFFGVGGSLDIRGTPGEVYFRGIRRLDNPGNYPTPIGAADRIDIVRGPASPIMGPAKTGGYINFVPKSARATNGSYLAEPKAEFTYTRGSWNNNFLSASVVGPGKLGNHEFGYSLYGELTDADSYYNFIKTRQTLLQASFDTDITPDLRIEFGGMYDNYHGVQNGGWNRVTQELIDNGTYITGHAKPLDTNGDGKISQGEAQAANGGLGLGTFGGAFCTDPPFDNPFASGLSNDCLRNIYPDSGLTDVGTAKLSRRNVLTGPNDFLNNRATTLYADLIWDAGKDFEIKNQLFYDGYKNGNENAYGFSQFADSYVIEDKILLSKKFTSDTGTFSIQAGPSIRYTKFKHADDFGYEYFGRVDLTEGYDALSTRLLSTQTDSGYSSYFQGHYTDAAFSLLADLDFAFGLDITAGGRYDRMSVTSTAVLPKMDATAFSVNVPALPVRVANLGNGNHVEKDTKGVWSWTASANYKAPLGLIPYGTISKQSVIITGQGAEVDPSNVYNNGWITASKLYEGGLKGSWLDNRLYAALSVYKQTRTDYTIQSLTVNQAIKTTGLEAEARWSVDRHLLLTAAYTHTKVVNLSFKNGGGTLFYYYGAETLRDAGVDPALIFGAAPNGLIPITDDSLAERPTPRNIYSGTASYAFDNGIALTASAYHVGSMWADYPQTLRLPAYTLVDLGVTYETKHWLFQVNVKNALNERYFRANFVELYASQNVKPELPRSWQGTIKYKF

Samples

Sample ID Description Type Environment
1 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
4 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
5 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
6 3300002076 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3 Metagenome Rhizosphere
7 3300002077 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 Metagenome Rhizosphere
8 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
9 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
10 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
11 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
12 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
13 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
14 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
15 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
16 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
17 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
18 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
19 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
20 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
21 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
22 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
23 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
24 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
25 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
26 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
27 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
28 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
29 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
30 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
31 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
32 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
33 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
34 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
35 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
36 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
38 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
39 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
40 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
41 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
42 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
43 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
44 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
45 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
46 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
47 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
48 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
49 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
50 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
51 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
72 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
73 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
74 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
75 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
76 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
77 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
78 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
79 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
80 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
81 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
82 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
83 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
84 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
85 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
86 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
87 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
88 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
89 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
90 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
91 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
92 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
93 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
94 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
95 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
96 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
97 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
98 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
99 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
100 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
101 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
102 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
103 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
104 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
105 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
106 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
107 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
108 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
109 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
110 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
111 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
112 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
113 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
114 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
115 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
116 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
117 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
118 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
119 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
120 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
121 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
122 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
123 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
124 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
125 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
126 3300053120 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere Metagenome Endosphere
127 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
128 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
129 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
130 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
131 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
132 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
133 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
134 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
135 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
136 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
137 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
138 3300053724 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 endosphere Metagenome Endosphere
139 3300053729 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 endosphere Metagenome Endosphere
140 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
141 2510917021 Novosphingobium sp. AP12 Isolate Rhizosphere
142 2582581305 Rhizorhabdus wittichii YR128 Isolate Rhizosphere
143 2599185354 Sphingomonas sp. NFR15 Isolate Rhizoplane
144 2738541275 Novosphingobium sp. GV027 Isolate Unclassified
145 2738541276 Cellvibrio sp. YR554 Isolate Unclassified
146 2738541301 Novosphingobium sp. GV079 Isolate Unclassified
147 2738541304 Novosphingobium sp. GV061 Isolate Unclassified
148 2738543022 Novosphingobium sp. GV055 Isolate Unclassified
149 2738543033 Novosphingobium sp. GV064 Isolate Unclassified
150 2739367664 Novosphingobium sp. GV002 Isolate Unclassified
151 2739367865 Novosphingobium sp. GV013 Isolate Unclassified
152 2751185897 Sphingomonas panacis DCY99 Isolate Unclassified
153 2808606401 Sphingobium sp. AEW010 Isolate Rhizosphere
154 2808606404 Sphingobium sp. AEW013 Isolate Rhizosphere
155 2808606405 Sphingobium sp. AEW001 Isolate Rhizosphere
156 2818991435 Caulobacter henricii 536 Isolate Unclassified
157 2818991454 Caulobacter rhizosphaerae 3260 Isolate Rhizosphere
158 2880518877 Sphingobium sp. JAI105 Isolate Rhizosphere
159 2919138771 Novosphingobium sp. 1748 Isolate Rhizosphere
160 2928027323 Sphingomonas sp. 1185 Isolate Unclassified
161 2928100450 Novosphingobium sp. 1529 Isolate Rhizosphere
162 2928959182 Novosphingobium capsulatum 1057 Isolate Unclassified
163 2984555340 Sphingomonas sp. SORGH_AS789 Isolate Aerial Root
164 2984564862 Sphingomonas sp. SORGH_AS870 Isolate Aerial Root
165 2990265787 Sphingomonas sp. SORGH_AS802 Isolate Aerial Root
166 2993356040 Sphingomonas sp. SORGH_AS742 Isolate Aerial Root
167 2993693658 Sphingomonas sp. SORGH_AS438 Isolate Aerial Root
168 8054302542 Novosphingobium kaempferiae Sx8-5 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 89.51
Metatranscriptomes 0
Isolates 10.49

Biome Distribution

Category Percentage (%)
Aerial Root 1.87
Bulb 0
Endosphere 14.61
Nodule 0
Rhizoplane 3
Rhizosphere 65.17
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207713_1005989 3300025735 Bacteria 7497
2 SwRhRL2b_contig_1561580 2162886007 Bacteria 23039
3 SwRhRL2b_contig_3841057 2162886007 Bacteria 6329
4 JGI24739J22299_10006197 3300001989 Bacteria 4517
5 JGI24737J22298_10002121 3300001990 Bacteria 7075
6 JGI24735J21928_10000928 3300002067 Bacteria 10489
7 JGI24749J21850_1000001 3300002076 Bacteria 67089
8 JGI24744J21845_10000245 3300002077 Bacteria 8775
9 JGI24751J29686_10000086 3300002459 Bacteria 52241
10 JGI25406J46586_10003445 3300003203 Bacteria 7439
11 Ga0055542_1002619 3300003762 Bacteria 5677
12 Ga0055531_10009558 3300003794 Bacteria 4944
13 Ga0065704_10000801 3300005289 Bacteria 18500
14 Ga0065704_10070176 3300005289 Bacteria 138803
15 Ga0065704_10085237 3300005289 Bacteria 3243
16 Ga0065707_10087741 3300005295 Bacteria 4906
17 Ga0065707_10090647 3300005295 Bacteria 4098
18 Ga0070670_100000003 3300005331 Bacteria 529510
19 Ga0070670_100003675 3300005331 Bacteria 12788
20 Ga0070670_100008369 3300005331 Bacteria 8818
21 Ga0070666_10005263 3300005335 Bacteria 7929
22 Ga0070668_100000093 3300005347 Bacteria 56453
23 Ga0070668_100009127 3300005347 Bacteria 7362
24 Ga0070669_100000084 3300005353 Bacteria 91046
25 Ga0070669_100000496 3300005353 Bacteria 29693
26 Ga0070669_100000726 3300005353 Bacteria 24090
27 Ga0070675_100002242 3300005354 Bacteria 14339
28 Ga0070671_100000354 3300005355 Bacteria 31493
29 Ga0070671_100003902 3300005355 Bacteria 11731
30 Ga0070659_100021579 3300005366 Bacteria 4907
31 Ga0070667_100000128 3300005367 Bacteria 95780
32 Ga0070667_100000162 3300005367 Bacteria 83150
33 Ga0070667_100000174 3300005367 Bacteria 79730
34 Ga0070667_100003243 3300005367 Bacteria 13909
35 Ga0070665_100000370 3300005548 Bacteria 66870
36 Ga0070665_100016214 3300005548 Bacteria 7476
37 Ga0068855_100000029 3300005563 Bacteria 171278
38 Ga0068857_100009042 3300005577 Bacteria 8640
39 Ga0068852_100004874 3300005616 Bacteria 9531
40 Ga0068859_100000211 3300005617 Bacteria 58042
41 Ga0068859_100002276 3300005617 Bacteria 19488
42 Ga0068859_100002876 3300005617 Bacteria 17483
43 Ga0068864_100000005 3300005618 Bacteria 400840
44 Ga0068864_100001151 3300005618 Bacteria 22080
45 Ga0068861_100000107 3300005719 Bacteria 41725
46 Ga0068861_100001681 3300005719 Bacteria 14186
47 Ga0068863_100000023 3300005841 Bacteria 186490
48 Ga0068863_100000047 3300005841 Bacteria 140249
49 Ga0068863_100003084 3300005841 Bacteria 16468
50 Ga0068863_100007810 3300005841 Bacteria 10462
51 Ga0068863_100034338 3300005841 Bacteria 4832
52 Ga0068858_100000322 3300005842 Bacteria 50648
53 Ga0068858_100000544 3300005842 Bacteria 39217
54 Ga0068858_100003831 3300005842 Bacteria 14872
55 Ga0068860_100000125 3300005843 Bacteria 123363
56 Ga0068860_100004169 3300005843 Bacteria 14821
57 Ga0068860_100014526 3300005843 Bacteria 7706
58 Ga0068860_100015192 3300005843 Bacteria 7521
59 Ga0068862_100000001 3300005844 Bacteria 523031
60 Ga0068862_100008770 3300005844 Bacteria 8374
61 Ga0068862_100009596 3300005844 Bacteria 8002
62 Ga0068862_100039843 3300005844 Bacteria 3992
63 Ga0081539_10000001 3300005985 Bacteria 808331
64 Ga0075364_10000807 3300006051 Bacteria 16518
65 Ga0075366_10012687 3300006195 Bacteria 4786
66 Ga0097620_100000211 3300006931 Bacteria 58042
67 Ga0097620_100002276 3300006931 Bacteria 19488
68 Ga0097620_100002876 3300006931 Bacteria 17483
69 Ga0105250_10007057 3300009092 Bacteria 4851
70 Ga0105245_10000829 3300009098 Bacteria 28128
71 Ga0105247_10000260 3300009101 Bacteria 48812
72 Ga0105247_10027083 3300009101 Bacteria 3466
73 Ga0105243_10056957 3300009148 Bacteria 3111
74 Ga0105248_10000222 3300009177 Bacteria 65122
75 Ga0105248_10001076 3300009177 Bacteria 30156
76 Ga0105248_10003993 3300009177 Bacteria 16309
77 Ga0105248_10010544 3300009177 Bacteria 10180
78 Ga0105248_10043120 3300009177 Bacteria 5060
79 Ga0105249_10064146 3300009553 Bacteria 3377
80 Ga0163162_10029249 3300013306 Bacteria 5453
81 Ga0163162_10076898 3300013306 Bacteria 3400
82 Ga0163163_10020974 3300014325 Bacteria 6160
83 Ga0157380_10000041 3300014326 Bacteria 75943
84 Ga0157379_10004669 3300014968 Bacteria 11758
85 Ga0163161_10000544 3300017792 Bacteria 30601
86 Ga0163161_10014211 3300017792 Bacteria 5544
87 Ga0163161_10044432 3300017792 Bacteria 3200
88 Ga0209148_1000061 3300025254 Bacteria 349575
89 Ga0209758_1000001 3300025297 Bacteria 1981790
90 Ga0209257_1003409 3300025304 Bacteria 13688
91 Ga0207710_10000159 3300025900 Bacteria 71625
92 Ga0207680_10002970 3300025903 Bacteria 7951
93 Ga0207647_10002731 3300025904 Bacteria 13324
94 Ga0207681_10000005 3300025923 Bacteria 555724
95 Ga0207681_10001019 3300025923 Bacteria 18197
96 Ga0207681_10002816 3300025923 Bacteria 11008
97 Ga0207650_10000004 3300025925 Bacteria 743372
98 Ga0207687_10000601 3300025927 Bacteria 24416
99 Ga0207644_10010920 3300025931 Bacteria 5999
100 Ga0207711_10000199 3300025941 Bacteria 64399
101 Ga0207711_10006020 3300025941 Bacteria 10249
102 Ga0207711_10008870 3300025941 Bacteria 8409
103 Ga0207711_10038453 3300025941 Bacteria 4069
104 Ga0207667_10000035 3300025949 Bacteria 301056
105 Ga0207668_10000232 3300025972 Bacteria 37304
106 Ga0207668_10006098 3300025972 Bacteria 7108
107 Ga0207668_10021706 3300025972 Bacteria 4098
108 Ga0207658_10000127 3300025986 Bacteria 83164
109 Ga0207658_10000165 3300025986 Bacteria 70667
110 Ga0207658_10000620 3300025986 Bacteria 31373
111 Ga0207658_10001709 3300025986 Bacteria 16655
112 Ga0207658_10005400 3300025986 Bacteria 8769
113 Ga0207658_10015604 3300025986 Bacteria 5212
114 Ga0207703_10000484 3300026035 Bacteria 41489
115 Ga0207703_10000532 3300026035 Bacteria 39270
116 Ga0207703_10004377 3300026035 Bacteria 11609
117 Ga0207641_10000079 3300026088 Bacteria 141110
118 Ga0207641_10000286 3300026088 Bacteria 63418
119 Ga0207641_10005797 3300026088 Bacteria 10483
120 Ga0207641_10011587 3300026088 Bacteria 7237
121 Ga0207641_10013105 3300026088 Bacteria 6798
122 Ga0207676_10000006 3300026095 Bacteria 681936
123 Ga0207676_10000188 3300026095 Bacteria 54316
124 Ga0207674_10016848 3300026116 Bacteria 7986
125 Ga0207675_100000317 3300026118 Bacteria 45991
126 Ga0207675_100000349 3300026118 Bacteria 44097
127 Ga0207683_10005949 3300026121 Bacteria 10455
128 Ga0268266_10000694 3300028379 Bacteria 45342
129 Ga0268265_10000001 3300028380 Bacteria 1230727
130 Ga0268265_10003640 3300028380 Bacteria 10995
131 Ga0268265_10003959 3300028380 Bacteria 10436
132 Ga0268264_10000166 3300028381 Bacteria 146960
133 Ga0268264_10003476 3300028381 Bacteria 13584
134 Ga0268264_10016464 3300028381 Bacteria 6053
135 Ga0307511_10000227 3300030521 Bacteria 57255
136 Ga0307509_10000016 3300031507 Bacteria 266991
137 Ga0307408_100000306 3300031548 Bacteria 46925
138 Ga0307408_100000545 3300031548 Bacteria 32434
139 Ga0307508_10008554 3300031616 Bacteria 9448
140 Ga0307406_10002491 3300031901 Bacteria 10037
141 Ga0395905_0000102 3300037471 Bacteria 143700
142 Ga0400483_286778 3300039062 Bacteria 3353
143 Ga0439458_0000507 3300042157 Bacteria 9973
144 Ga0466964_0000565 3300044706 Bacteria 11635
145 Ga0466960_0001130 3300044901 Bacteria 9575
146 Ga0495627_000159 3300046453 Bacteria 76595
147 Ga0495638_0010309 3300046460 Bacteria 6500
148 Ga0495638_0012387 3300046460 Bacteria 5847
149 Ga0495650_0000874 3300046471 Bacteria 35818
150 Ga0495650_0002632 3300046471 Bacteria 14052
151 Ga0495596_0000042 3300046500 Bacteria 90746
152 Ga0495607_0039312 3300046501 Bacteria 2826
153 Ga0495606_0000594 3300046507 Bacteria 57221
154 Ga0495610_0000044 3300046512 Bacteria 156847
155 Ga0495610_0000619 3300046512 Bacteria 35124
156 Ga0495632_0000001 3300046519 Bacteria 873295
157 Ga0495632_0000272 3300046519 Bacteria 51232
158 Ga0495637_0000065 3300046520 Bacteria 89961
159 Ga0495643_0000006 3300046522 Bacteria 419524
160 Ga0495643_0000054 3300046522 Bacteria 198757
161 Ga0495643_0014689 3300046522 Bacteria 4652
162 Ga0495648_0000024 3300046524 Bacteria 235605
163 Ga0495663_0000001 3300046525 Bacteria 595264
164 Ga0495633_0000053 3300046558 Bacteria 152374
165 Ga0495633_0001725 3300046558 Bacteria 16337
166 Ga0495668_0051480 3300046616 Bacteria 2280
167 Ga0495625_0023023 3300046660 Bacteria 4764
168 Ga0495671_0000008 3300046692 Bacteria 419524
169 Ga0495687_000045 3300047443 Bacteria 211968
170 Ga0495681_0000014 3300047470 Bacteria 184395
171 Ga0495681_0005185 3300047470 Bacteria 8762
172 Ga0495686_0001084 3300047472 Bacteria 32345
173 Ga0495686_0001465 3300047472 Bacteria 25695
174 Ga0495686_0015480 3300047472 Bacteria 5205
175 Ga0495615_0000058 3300048090 Bacteria 34505
176 Ga0496100_0010756 3300048903 Bacteria 5189
177 Ga0496101_0005571 3300048904 Bacteria 8034
178 Ga0496102_0001174 3300048905 Bacteria 23884
179 Ga0496103_0000103 3300048906 Bacteria 93232
180 Ga0496104_0000662 3300048907 Bacteria 29528
181 Ga0496105_0000179 3300048908 Bacteria 42036
182 Ga0496113_0001347 3300048916 Bacteria 13591
183 Ga0496116_0035563 3300048919 Bacteria 3497
184 Ga0496117_0015002 3300048920 Bacteria 6637
185 Ga0496118_0006255 3300048921 Bacteria 13165
186 Ga0496118_0016951 3300048921 Bacteria 6653
187 Ga0496118_0021640 3300048921 Bacteria 5652
188 Ga0496119_0002297 3300048922 Bacteria 21143
189 Ga0496120_0000745 3300048923 Bacteria 47313
190 Ga0496121_0001398 3300048924 Bacteria 40868
191 Ga0496121_0002119 3300048924 Bacteria 31184
192 Ga0496121_0004325 3300048924 Bacteria 19224
193 Ga0496122_0001615 3300048925 Bacteria 35217
194 Ga0496122_0002812 3300048925 Bacteria 23857
195 Ga0496122_0004773 3300048925 Bacteria 16590
196 Ga0496122_0005105 3300048925 Bacteria 15838
197 Ga0496123_0001955 3300048926 Bacteria 26791
198 Ga0496123_0002450 3300048926 Bacteria 22995
199 Ga0496123_0005420 3300048926 Bacteria 12852
200 Ga0496124_0000728 3300048927 Bacteria 53915
201 Ga0496124_0006174 3300048927 Bacteria 13134
202 Ga0496124_0027605 3300048927 Bacteria 5092
203 Ga0496124_0064985 3300048927 Bacteria 3044
204 Ga0496125_0009234 3300048928 Bacteria 10187
205 Ga0496125_0010692 3300048928 Bacteria 9260
206 Ga0496125_0016704 3300048928 Bacteria 7037
207 Ga0496126_0000103 3300048929 Bacteria 201037
208 nmdc:mga00v17_9600_c1 3300050491 Bacteria 5244
209 nmdc:mga0k408_11704_c1 3300050493 Bacteria 4783
210 nmdc:mga07m45_1071_c1 3300050496 Bacteria 10955
211 nmdc:mga07m45_22294_c1 3300050496 Bacteria 3456
212 Ga0500643_000170 3300053087 Bacteria 63864
213 Ga0500647_0009693 3300053091 Bacteria 4232
214 Ga0500556_0000104 3300053104 Bacteria 74800
215 Ga0500556_0002066 3300053104 Bacteria 6930
216 Ga0500562_001012 3300053108 Bacteria 6868
217 Ga0500597_015139 3300053120 Bacteria 2909
218 Ga0500607_000036 3300053121 Bacteria 87178
219 Ga0500607_000293 3300053121 Bacteria 47399
220 Ga0500608_000041 3300053122 Bacteria 56854
221 Ga0500618_004255 3300053125 Bacteria 4638
222 Ga0500642_0000001 3300053130 Bacteria 1468402
223 Ga0500642_0011093 3300053130 Bacteria 3208
224 Ga0500655_000021 3300053133 Bacteria 43984
225 Ga0500559_0000751 3300053136 Bacteria 21285
226 Ga0500559_0004177 3300053136 Bacteria 6929
227 Ga0500564_003797 3300053138 Bacteria 5930
228 Ga0500590_013372 3300053148 Bacteria 4211
229 Ga0500622_0004339 3300053156 Bacteria 8961
230 Ga0500624_000008 3300053157 Bacteria 181801
231 Ga0500624_000299 3300053157 Bacteria 16974
232 Ga0500637_0000037 3300053178 Bacteria 47475
233 Ga0500637_0001378 3300053178 Bacteria 10321
234 Ga0500637_0006893 3300053178 Bacteria 5644
235 Ga0500570_002608 3300053724 Bacteria 9018
236 Ga0500625_000001 3300053729 Bacteria 395993
237 Ga0500645_000001 3300053730 Bacteria 455558
238 Ga0500645_001101 3300053730 Bacteria 14792
239 Ga0500645_003504 3300053730 Bacteria 6343
240 2511126995 2510917021 Bacteria 5705459
241 2585260658 2582581305 Bacteria 4895574
242 2600203519 2599185354 Bacteria 4398675
243 2738710222 2738541275 Bacteria 4830863
244 2738714651 2738541276 Bacteria 4690596
245 2738848647 2738541301 Bacteria 4834102
246 2738864376 2738541304 Bacteria 4833665
247 2739296894 2738543022 Bacteria 4835059
248 2739358572 2738543033 Bacteria 4833336
249 2739648939 2739367664 Bacteria 4114334
250 2740027412 2739367865 Bacteria 4114482
251 2753765710 2751185897 Bacteria 5322941
252 2809063873 2808606401 Bacteria 4586670
253 2809079841 2808606404 Bacteria 4652788
254 2809084206 2808606405 Bacteria 4586632
255 2819540315 2818991435 Bacteria 5433759
256 2819649302 2818991454 Bacteria 5563326
257 2880523440 2880518877 Bacteria 5012590
258 2919141138 2919138771 Bacteria 5281312
259 2928029552 2928027323 Bacteria 4382488
260 2928101867 2928100450 Bacteria 4837635
261 2928959959 2928959182 Bacteria 4725774
262 2984557478 2984555340 Bacteria 4247089
263 2984568162 2984564862 Bacteria 4339992
264 2990267578 2990265787 Bacteria 3943888
265 2993359205 2993356040 Bacteria 4247105
266 2993695187 2993693658 Bacteria 4040749
267 8054304174 8054302542 Bacteria 5698134
268 Ga0207713_1005989
269 SwRhRL2b_contig_1561580
270 SwRhRL2b_contig_3841057
271 JGI24739J22299_10006197
272 JGI24737J22298_10002121
273 JGI24735J21928_10000928
274 JGI24749J21850_1000001
275 JGI24744J21845_10000245
276 JGI24751J29686_10000086
277 JGI25406J46586_10003445
278 Ga0055542_1002619
279 Ga0055531_10009558
280 Ga0065704_10000801
281 Ga0065704_10070176
282 Ga0065704_10085237
283 Ga0065707_10087741
284 Ga0065707_10090647
285 Ga0070670_100000003
286 Ga0070670_100003675
287 Ga0070670_100008369
288 Ga0070666_10005263
289 Ga0070668_100000093
290 Ga0070668_100009127
291 Ga0070669_100000084
292 Ga0070669_100000496
293 Ga0070669_100000726
294 Ga0070675_100002242
295 Ga0070671_100000354
296 Ga0070671_100003902
297 Ga0070659_100021579
298 Ga0070667_100000128
299 Ga0070667_100000162
300 Ga0070667_100000174
301 Ga0070667_100003243
302 Ga0070665_100000370
303 Ga0070665_100016214
304 Ga0068855_100000029
305 Ga0068857_100009042
306 Ga0068852_100004874
307 Ga0068859_100000211
308 Ga0068859_100002276
309 Ga0068859_100002876
310 Ga0068864_100000005
311 Ga0068864_100001151
312 Ga0068861_100000107
313 Ga0068861_100001681
314 Ga0068863_100000023
315 Ga0068863_100000047
316 Ga0068863_100003084
317 Ga0068863_100007810
318 Ga0068863_100034338
319 Ga0068858_100000322
320 Ga0068858_100000544
321 Ga0068858_100003831
322 Ga0068860_100000125
323 Ga0068860_100004169
324 Ga0068860_100014526
325 Ga0068860_100015192
326 Ga0068862_100000001
327 Ga0068862_100008770
328 Ga0068862_100009596
329 Ga0068862_100039843
330 Ga0081539_10000001
331 Ga0075364_10000807
332 Ga0075366_10012687
333 Ga0097620_100000211
334 Ga0097620_100002276
335 Ga0097620_100002876
336 Ga0105250_10007057
337 Ga0105245_10000829
338 Ga0105247_10000260
339 Ga0105247_10027083
340 Ga0105243_10056957
341 Ga0105248_10000222
342 Ga0105248_10001076
343 Ga0105248_10003993
344 Ga0105248_10010544
345 Ga0105248_10043120
346 Ga0105249_10064146
347 Ga0163162_10029249
348 Ga0163162_10076898
349 Ga0163163_10020974
350 Ga0157380_10000041
351 Ga0157379_10004669
352 Ga0163161_10000544
353 Ga0163161_10014211
354 Ga0163161_10044432
355 Ga0209148_1000061
356 Ga0209758_1000001
357 Ga0209257_1003409
358 Ga0207710_10000159
359 Ga0207680_10002970
360 Ga0207647_10002731
361 Ga0207681_10000005
362 Ga0207681_10001019
363 Ga0207681_10002816
364 Ga0207650_10000004
365 Ga0207687_10000601
366 Ga0207644_10010920
367 Ga0207711_10000199
368 Ga0207711_10006020
369 Ga0207711_10008870
370 Ga0207711_10038453
371 Ga0207667_10000035
372 Ga0207668_10000232
373 Ga0207668_10006098
374 Ga0207668_10021706
375 Ga0207658_10000127
376 Ga0207658_10000165
377 Ga0207658_10000620
378 Ga0207658_10001709
379 Ga0207658_10005400
380 Ga0207658_10015604
381 Ga0207703_10000484
382 Ga0207703_10000532
383 Ga0207703_10004377
384 Ga0207641_10000079
385 Ga0207641_10000286
386 Ga0207641_10005797
387 Ga0207641_10011587
388 Ga0207641_10013105
389 Ga0207676_10000006
390 Ga0207676_10000188
391 Ga0207674_10016848
392 Ga0207675_100000317
393 Ga0207675_100000349
394 Ga0207683_10005949
395 Ga0268266_10000694
396 Ga0268265_10000001
397 Ga0268265_10003640
398 Ga0268265_10003959
399 Ga0268264_10000166
400 Ga0268264_10003476
401 Ga0268264_10016464
402 Ga0307511_10000227
403 Ga0307509_10000016
404 Ga0307408_100000306
405 Ga0307408_100000545
406 Ga0307508_10008554
407 Ga0307406_10002491
408 Ga0395905_0000102
409 Ga0400483_286778
410 Ga0439458_0000507
411 Ga0466964_0000565
412 Ga0466960_0001130
413 Ga0495627_000159
414 Ga0495638_0010309
415 Ga0495638_0012387
416 Ga0495650_0000874
417 Ga0495650_0002632
418 Ga0495596_0000042
419 Ga0495607_0039312
420 Ga0495606_0000594
421 Ga0495610_0000044
422 Ga0495610_0000619
423 Ga0495632_0000001
424 Ga0495632_0000272
425 Ga0495637_0000065
426 Ga0495643_0000006
427 Ga0495643_0000054
428 Ga0495643_0014689
429 Ga0495648_0000024
430 Ga0495663_0000001
431 Ga0495633_0000053
432 Ga0495633_0001725
433 Ga0495668_0051480
434 Ga0495625_0023023
435 Ga0495671_0000008
436 Ga0495687_000045
437 Ga0495681_0000014
438 Ga0495681_0005185
439 Ga0495686_0001084
440 Ga0495686_0001465
441 Ga0495686_0015480
442 Ga0495615_0000058
443 Ga0496100_0010756
444 Ga0496101_0005571
445 Ga0496102_0001174
446 Ga0496103_0000103
447 Ga0496104_0000662
448 Ga0496105_0000179
449 Ga0496113_0001347
450 Ga0496116_0035563
451 Ga0496117_0015002
452 Ga0496118_0006255
453 Ga0496118_0016951
454 Ga0496118_0021640
455 Ga0496119_0002297
456 Ga0496120_0000745
457 Ga0496121_0001398
458 Ga0496121_0002119
459 Ga0496121_0004325
460 Ga0496122_0001615
461 Ga0496122_0002812
462 Ga0496122_0004773
463 Ga0496122_0005105
464 Ga0496123_0001955
465 Ga0496123_0002450
466 Ga0496123_0005420
467 Ga0496124_0000728
468 Ga0496124_0006174
469 Ga0496124_0027605
470 Ga0496124_0064985
471 Ga0496125_0009234
472 Ga0496125_0010692
473 Ga0496125_0016704
474 Ga0496126_0000103
475 nmdc:mga00v17_9600_c1
476 nmdc:mga0k408_11704_c1
477 nmdc:mga07m45_1071_c1
478 nmdc:mga07m45_22294_c1
479 Ga0500643_000170
480 Ga0500647_0009693
481 Ga0500556_0000104
482 Ga0500556_0002066
483 Ga0500562_001012
484 Ga0500597_015139
485 Ga0500607_000036
486 Ga0500607_000293
487 Ga0500608_000041
488 Ga0500618_004255
489 Ga0500642_0000001
490 Ga0500642_0011093
491 Ga0500655_000021
492 Ga0500559_0000751
493 Ga0500559_0004177
494 Ga0500564_003797
495 Ga0500590_013372
496 Ga0500622_0004339
497 Ga0500624_000008
498 Ga0500624_000299
499 Ga0500637_0000037
500 Ga0500637_0001378
501 Ga0500637_0006893
502 Ga0500570_002608
503 Ga0500625_000001
504 Ga0500645_000001
505 Ga0500645_001101
506 Ga0500645_003504
507 2511126995
508 2585260658
509 2600203519
510 2738710222
511 2738714651
512 2738848647
513 2738864376
514 2739296894
515 2739358572
516 2739648939
517 2740027412
518 2753765710
519 2809063873
520 2809079841
521 2809084206
522 2819540315
523 2819649302
524 2880523440
525 2919141138
526 2928029552
527 2928101867
528 2928959959
529 2984557478
530 2984568162
531 2990267578
532 2993359205
533 2993695187
534 8054304174

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07715

Plug

TonB-dependent Receptor Plug Domain

115

213

0.96

PF00593

TonB_dep_Rec_b-barrel

TonB dependent receptor-like, beta-barrel

371

847

0.63

Structural Annotation

Top 5 Hits

ID Description Score Start End
5fp2-assembly1.cif.gz_A crystal structure of the siderophore receptor pira from pseudomonas aeruginosa 0.7705 59 796
3qlb-assembly1.cif.gz_A enantiopyochelin outer membrane tonb-dependent transporter from pseudomonas fluorescens bound to the ferri-enantiopyochelin 0.7682 32 796
6z8a-assembly1.cif.gz_A outer membrane foxa in complex with nocardamine 0.7656 31 796
2guf-assembly1.cif.gz_A in meso crystal structure of the cobalamin transporter, btub 0.7641 38 796
6i97-assembly1.cif.gz_A structure of the ferrioxamine b transporter foxa from pseudomonas aeruginosa in complex with ferrioxamine b and a c-terminal tonb fragment 0.7629 16 796
ID Description Score Start End Superfamily
3efmA02 Mainly Beta;Beta Barrel;Maltoporin; Chain A;TonB-dependent receptor, beta-barrel domain 0.7612 165 796 2.40.170.20
3rgnA02 Mainly Beta;Beta Barrel;Maltoporin; Chain A;TonB-dependent receptor, beta-barrel domain 0.7611 163 796 2.40.170.20
3rgnA02 Mainly Beta;Beta Barrel;Maltoporin; Chain A;TonB-dependent receptor, beta-barrel domain 0.7595 163 796 2.40.170.20
3efmA02 Mainly Beta;Beta Barrel;Maltoporin; Chain A;TonB-dependent receptor, beta-barrel domain 0.7579 165 796 2.40.170.20
3qlbB02 Mainly Beta;Beta Barrel;Maltoporin; Chain A;TonB-dependent receptor, beta-barrel domain 0.7565 165 796 2.40.170.20
ID Description Score Start End GO Terms
AF-A0A3B9RKG6-F1-model_v4 deleted 0.8018 165 796
AF-A0A1F3QCQ7-F1-model_v4 deleted 0.8017 39 796
AF-A0A3B9RKG6-F1-model_v4 deleted 0.799 165 796
AF-A0A4Y1MPU7-F1-model_v4 Outer membrane siderophore receptor 0.7901 469 722 GO:0009279
GO:0015344
AF-A0A1G1IKW4-F1-model_v4 TonB-dependent receptor 0.7868 122 796 GO:0009279
GO:0033214

Map