F375013

General Info

Members Datasets Scaffolds Average Seq Length
267 197 534 296

Family's Representative Sequence

Representative Sequence 3300046530|Ga0495654_0000462|Ga0495654_0000462_22171_23175
Length 334
Sequence MRSVNLPSDAAGNAAVSDKQTSNNSFFSEEYTGMIRLLEGKVAIVTGAGGGLGRAHAMALAQHGARVVVNDLGGELEGSRARAVVDEIERRGGEAIANGGSVTDFAEMQAMVAATIAKWGRVDILVNNAGILRDKSFAKMGLDDFRLVMDVHVMGAVNCTKAVWDHMRAQNYGRIVFTTSSSGLYGNFGQANYGTAKMALVGLMQTLALEGAKQNIRVNCLAPTAATSMTEGILSPEALLKLQPEKVSPGVVALVAEDAPTRMILLAGAESFESAHVTMTNGLYLGNVDEVAAQILSRLDDIQDRSGESVPGTGFEQYQLELSKAGMTAALPGH

Samples

Sample ID Description Type Environment
1 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
2 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
3 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
4 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
5 3300002244 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M1 Metagenome Rhizosphere
6 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
7 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
8 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
9 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
10 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
11 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
12 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
13 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
14 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
15 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
16 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
17 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
18 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
19 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
20 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
21 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
22 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
23 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
24 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
25 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
26 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
27 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
28 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
29 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
30 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
31 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
32 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
33 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
34 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
35 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
36 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
37 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
38 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
39 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
40 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
41 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
42 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
43 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
44 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
45 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
46 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
47 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
48 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
49 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
50 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
51 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
53 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
54 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
55 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300027614 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
79 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
80 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
81 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
82 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
83 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
84 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
85 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
86 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
87 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
88 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
89 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
90 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
91 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
92 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
93 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
94 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
95 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
96 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
97 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
98 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
99 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
100 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
101 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
102 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
103 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
104 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
105 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
106 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
107 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
108 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
109 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
110 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
111 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
112 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
113 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
114 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
115 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
116 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
117 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
118 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
119 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
120 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
121 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
122 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
123 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
124 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
125 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
126 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
127 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
128 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
129 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
130 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
131 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
132 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
133 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
134 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
135 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
136 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
137 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
138 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
139 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
140 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
141 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
143 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
145 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
146 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
147 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
148 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
149 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
151 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
152 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
153 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
154 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
155 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
156 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
157 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
158 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
159 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
160 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
161 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
162 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
163 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
164 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
165 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
166 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
167 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
168 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
169 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
170 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
171 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
172 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
173 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
174 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
175 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
176 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
177 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
178 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
179 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere
180 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
181 2513020051 Variovorax sp. CF313 Isolate Rhizosphere
182 2585428057 Methylibium sp. YR605 Isolate Rhizosphere
183 2585428058 Methylibium sp. CF468 Isolate Rhizosphere
184 2588253510 Rhizobacter sp. OV335 Isolate Rhizosphere
185 2599185359 Sphingomonas sp. NFR04 Isolate Rhizoplane
186 2643221683 Variovorax sp. Root473 Isolate Unclassified
187 2738541317 Rhizobium halophytocola DSM 21600 Isolate Unclassified
188 2738543012 Acidovorax sp. CF301 Isolate Unclassified
189 2816332133 Acidovorax radicis 2721A Isolate Unclassified
190 2842747753 Variovorax sp. R-72060 Isolate Unclassified
191 2857576091 Pigmentiphaga sp. R-72090 Isolate Unclassified
192 2881412998 Achromobacter aloeverae AVA-1 Isolate Unclassified
193 2899803654 Agrobacterium sp. a22-2 Isolate Unclassified
194 2913308742 Rhizobium halophytocola DSM 21600 Isolate Unclassified
195 2945909444 Variovorax sp. CRF3-Va-1 W1I1 Isolate Rhizosphere
196 2945984333 Variovorax sp. W2I14 Isolate Rhizosphere
197 8033232454 Acinetobacter radioresistens SA188 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 93.63
Metatranscriptomes 0
Isolates 6.37

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 14.23
Nodule 0.37
Rhizoplane 1.5
Rhizosphere 74.53
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495654_0000462 3300046530 Bacteria 33930
2 JGI24736J21556_1015987 3300001904 Bacteria 1198
3 JGI24739J22299_10001284 3300001989 Bacteria 9444
4 JGI24737J22298_10022090 3300001990 Bacteria 2022
5 JGI24742J22300_10006529 3300002244 Bacteria 1925
6 JGI25152J39213_1002258 3300002773 Bacteria 7443
7 JGI25151J46595_10000077 3300003187 Bacteria 133862
8 JGI25151J46595_10000639 3300003187 Bacteria 30118
9 JGI25153J46596_10000537 3300003215 Bacteria 23734
10 rootH1_10015310 3300003323 Bacteria 7695
11 Ga0055526_1000296 3300003771 Bacteria 41724
12 Ga0065165_1001128 3300005262 Bacteria 31425
13 Ga0070658_10008162 3300005327 Bacteria 8419
14 Ga0070676_10336450 3300005328 Bacteria 1034
15 Ga0070683_100001582 3300005329 Bacteria 17608
16 Ga0070660_100109756 3300005339 Bacteria 2194
17 Ga0070661_100081966 3300005344 Bacteria 2382
18 Ga0070692_10037931 3300005345 Bacteria 2453
19 Ga0070669_100024214 3300005353 Bacteria 4352
20 Ga0070671_100044731 3300005355 Bacteria 3679
21 Ga0070671_100527730 3300005355 Bacteria 1017
22 Ga0070659_100100050 3300005366 Bacteria 2333
23 Ga0068867_100001468 3300005459 Bacteria 16337
24 Ga0070684_100002777 3300005535 Bacteria 12965
25 Ga0068853_100107068 3300005539 Bacteria 2478
26 Ga0068853_100203821 3300005539 Bacteria 1801
27 Ga0070665_100012608 3300005548 Bacteria 8509
28 Ga0068855_100188967 3300005563 Bacteria 2325
29 Ga0068857_100010700 3300005577 Bacteria 7982
30 Ga0068854_100119764 3300005578 Bacteria 1996
31 Ga0068864_100076909 3300005618 Bacteria 2917
32 Ga0068861_100002167 3300005719 Bacteria 12741
33 Ga0068860_100010045 3300005843 Bacteria 9379
34 Ga0068862_100007436 3300005844 Bacteria 9081
35 Ga0075363_100155363 3300006048 Bacteria 1293
36 Ga0070712_100062407 3300006175 Bacteria 2635
37 Ga0075370_10044881 3300006353 Bacteria 2499
38 Ga0075370_10077424 3300006353 Bacteria 1908
39 Ga0079104_1015842 3300006946 Bacteria 2221
40 Ga0105243_10004371 3300009148 Bacteria 11188
41 Ga0105248_10676890 3300009177 Bacteria 1164
42 Ga0105237_10022445 3300009545 Bacteria 6475
43 Ga0105249_10021397 3300009553 Bacteria 5789
44 Ga0157369_10000456 3300013105 Bacteria 54115
45 Ga0157378_10067007 3300013297 Bacteria 3216
46 Ga0163162_10010332 3300013306 Bacteria 9074
47 Ga0157372_10014402 3300013307 Bacteria 8457
48 Ga0163163_10555266 3300014325 Bacteria 1211
49 Ga0157380_10522849 3300014326 Bacteria 1158
50 Ga0182008_10000207 3300014497 Bacteria 46359
51 Ga0163161_10029573 3300017792 Bacteria 3895
52 Ga0207425_1000259 3300025245 Bacteria 39126
53 Ga0209129_1000175 3300025258 Bacteria 93817
54 Ga0209673_1007370 3300025273 Bacteria 5090
55 Ga0209673_1024658 3300025273 Bacteria 2015
56 Ga0209673_1028937 3300025273 Bacteria 1773
57 Ga0209676_1003069 3300025292 Bacteria 10771
58 Ga0209025_1000003 3300025294 Bacteria 1366495
59 Ga0209025_1000018 3300025294 Bacteria 686898
60 Ga0209564_1000136 3300025295 Bacteria 185198
61 Ga0209758_1000275 3300025297 Bacteria 102404
62 Ga0207647_10012466 3300025904 Bacteria 5917
63 Ga0207645_10009979 3300025907 Bacteria 6542
64 Ga0207645_10032463 3300025907 Bacteria 3355
65 Ga0207645_10066857 3300025907 Bacteria 2298
66 Ga0207671_10025426 3300025914 Bacteria 4447
67 Ga0207693_10205111 3300025915 Bacteria 1550
68 Ga0207657_10060674 3300025919 Bacteria 3245
69 Ga0207657_10062255 3300025919 Bacteria 3195
70 Ga0207649_10010077 3300025920 Bacteria 5185
71 Ga0207649_10019337 3300025920 Bacteria 3891
72 Ga0207681_10011844 3300025923 Bacteria 5367
73 Ga0207681_10081626 3300025923 Bacteria 2283
74 Ga0207690_10281854 3300025932 Bacteria 1294
75 Ga0207709_10005441 3300025935 Bacteria 7235
76 Ga0207691_10057676 3300025940 Bacteria 3533
77 Ga0207667_10301333 3300025949 Bacteria 1638
78 Ga0207712_10260217 3300025961 Bacteria 1407
79 Ga0207658_10036797 3300025986 Bacteria 3512
80 Ga0207641_10332803 3300026088 Bacteria 1443
81 Ga0207648_10000190 3300026089 Bacteria 64762
82 Ga0207676_10361141 3300026095 Bacteria 1346
83 Ga0207674_10004125 3300026116 Bacteria 17573
84 Ga0207675_100004014 3300026118 Bacteria 14272
85 Ga0207683_10083789 3300026121 Bacteria 2833
86 Ga0209970_1001100 3300027614 Bacteria 4768
87 Ga0268266_10011638 3300028379 Bacteria 7638
88 Ga0268265_10004765 3300028380 Bacteria 9355
89 Ga0268264_10080676 3300028381 Bacteria 2778
90 Ga0307513_10010066 3300031456 Bacteria 11911
91 Ga0307516_10000075 3300031730 Bacteria 107790
92 Ga0307516_10013066 3300031730 Bacteria 8879
93 Ga0307405_10007536 3300031731 Bacteria 5451
94 Ga0307405_10025130 3300031731 Bacteria 3415
95 Ga0307413_10000189 3300031824 Bacteria 17701
96 Ga0307413_10005509 3300031824 Bacteria 5660
97 Ga0307410_10001852 3300031852 Bacteria 9858
98 Ga0307406_10073342 3300031901 Bacteria 2250
99 Ga0307406_10255247 3300031901 Bacteria 1323
100 Ga0307407_10008724 3300031903 Bacteria 4673
101 Ga0307407_10068537 3300031903 Bacteria 2102
102 Ga0307412_10020934 3300031911 Bacteria 3987
103 Ga0307412_10079715 3300031911 Bacteria 2260
104 Ga0307412_10201715 3300031911 Bacteria 1511
105 Ga0307409_100000313 3300031995 Bacteria 19848
106 Ga0307409_100203214 3300031995 Bacteria 1774
107 Ga0307416_100036406 3300032002 Bacteria 3774
108 Ga0307414_10000840 3300032004 Bacteria 15699
109 Ga0307414_10012164 3300032004 Bacteria 5077
110 Ga0307411_10001191 3300032005 Bacteria 10278
111 Ga0307411_10003537 3300032005 Bacteria 7272
112 Ga0307415_100000099 3300032126 Bacteria 36620
113 Ga0307415_100011033 3300032126 Bacteria 5148
114 Ga0373923_0006447 3300035111 Bacteria 4059
115 Ga0373936_0015041 3300035113 Bacteria 2963
116 Ga0373953_0015148 3300035117 Bacteria 2787
117 Ga0373957_0057102 3300035120 Bacteria 1504
118 Ga0373955_0004104 3300035172 Bacteria 6429
119 Ga0373933_0000440 3300035724 Bacteria 25968
120 Ga0373937_0001057 3300036401 Bacteria 23218
121 Ga0395899_0135086 3300037312 Bacteria 1758
122 Ga0395899_0337157 3300037312 Bacteria 1012
123 Ga0395905_0440049 3300037471 Bacteria 1201
124 Ga0395901_0257431 3300038443 Bacteria 1817
125 Ga0436365_0041228 3300039437 Bacteria 4974
126 Ga0436365_1387651 3300039437 Bacteria 1425
127 Ga0451577_0005554 3300042876 Bacteria 12847
128 Ga0466969_0076949 3300044656 Bacteria 1597
129 Ga0466961_0260645 3300044693 Bacteria 1063
130 Ga0466959_0003517 3300045049 Bacteria 10281
131 Ga0451576_0326567 3300045051 Bacteria 1606
132 Ga0466967_0219910 3300045976 Bacteria 1804
133 Ga0495592_0018190 3300046454 Bacteria 5340
134 Ga0495651_0000375 3300046462 Bacteria 34541
135 Ga0495653_0000674 3300046463 Bacteria 26104
136 Ga0495606_0000279 3300046507 Bacteria 88805
137 Ga0495608_0000164 3300046511 Bacteria 47157
138 Ga0495630_0002248 3300046517 Bacteria 13441
139 Ga0495632_0003923 3300046519 Bacteria 10332
140 Ga0495648_0000113 3300046524 Bacteria 98919
141 Ga0495652_0031663 3300046529 Bacteria 4630
142 Ga0495654_0000946 3300046530 Bacteria 21499
143 Ga0495640_0111014 3300046533 Bacteria 1792
144 Ga0495586_0055390 3300046535 Bacteria 2149
145 Ga0495645_0000520 3300046543 Bacteria 26574
146 Ga0495645_0027612 3300046543 Bacteria 4124
147 Ga0495667_0001755 3300046559 Bacteria 14390
148 Ga0495635_0000328 3300046663 Bacteria 30368
149 Ga0495657_0000858 3300046675 Bacteria 26800
150 Ga0495599_0000418 3300046678 Bacteria 24252
151 Ga0495623_0001187 3300046679 Bacteria 17670
152 Ga0495670_0047261 3300046691 Bacteria 2151
153 Ga0495600_0000443 3300046809 Bacteria 21356
154 Ga0495604_0001805 3300047317 Bacteria 17435
155 Ga0495674_0002919 3300047319 Bacteria 16639
156 Ga0495680_0013336 3300047322 Bacteria 7176
157 Ga0495684_0000730 3300047471 Bacteria 26490
158 Ga0495686_0045653 3300047472 Bacteria 2771
159 Ga0495602_0014274 3300048088 Bacteria 8069
160 Ga0496109_0030939 3300048912 Bacteria 4799
161 Ga0496112_0035044 3300048915 Bacteria 4885
162 Ga0496113_0002671 3300048916 Bacteria 10452
163 Ga0496118_0068641 3300048921 Bacteria 2573
164 Ga0496121_0031660 3300048924 Bacteria 4827
165 Ga0496121_0115213 3300048924 Bacteria 2041
166 Ga0496121_0212595 3300048924 Bacteria 1369
167 Ga0496122_0000034 3300048925 Bacteria 320661
168 Ga0496123_0000141 3300048926 Bacteria 147111
169 Ga0496124_0006512 3300048927 Bacteria 12709
170 Ga0496124_0023619 3300048927 Bacteria 5609
171 Ga0496124_0122873 3300048927 Bacteria 2072
172 Ga0501032_0015942 3300049569 Bacteria 5290
173 Ga0501032_0143143 3300049569 Bacteria 1574
174 Ga0501033_0000719 3300049570 Bacteria 30348
175 Ga0501033_0004413 3300049570 Bacteria 11258
176 Ga0501033_0012222 3300049570 Bacteria 6554
177 Ga0501034_0177848 3300049571 Bacteria 2093
178 Ga0501034_0193938 3300049571 Bacteria 1992
179 Ga0501036_0283250 3300049572 Bacteria 1387
180 Ga0501037_0000007 3300049573 Bacteria 215187
181 Ga0501037_0109938 3300049573 Bacteria 1986
182 Ga0501037_0331518 3300049573 Bacteria 1052
183 Ga0501038_0015017 3300049574 Bacteria 7054
184 Ga0501038_0187424 3300049574 Bacteria 1666
185 Ga0501039_0149409 3300049575 Bacteria 1836
186 Ga0501039_0154816 3300049575 Bacteria 1801
187 Ga0501043_0000061 3300049579 Bacteria 97512
188 Ga0501043_0130357 3300049579 Bacteria 1970
189 Ga0501046_0063285 3300049580 Bacteria 2889
190 Ga0501046_0072165 3300049580 Bacteria 2681
191 Ga0501046_0163525 3300049580 Bacteria 1673
192 Ga0501046_0166397 3300049580 Bacteria 1656
193 Ga0501047_0006878 3300049581 Bacteria 10687
194 Ga0501047_0051689 3300049581 Bacteria 3971
195 Ga0501047_0087223 3300049581 Bacteria 2998
196 Ga0501047_0224980 3300049581 Bacteria 1731
197 Ga0501047_0245786 3300049581 Bacteria 1639
198 Ga0501047_0329689 3300049581 Bacteria 1365
199 Ga0501067_0038998 3300049583 Bacteria 2637
200 Ga0501068_0007756 3300049584 Bacteria 5944
201 Ga0501069_0000050 3300049585 Bacteria 71263
202 Ga0501070_0000156 3300049586 Bacteria 62807
203 Ga0501070_0000454 3300049586 Bacteria 37270
204 Ga0501070_0041160 3300049586 Bacteria 3849
205 Ga0501070_0127815 3300049586 Bacteria 2100
206 Ga0501071_0003644 3300049587 Bacteria 9659
207 Ga0501071_0217331 3300049587 Bacteria 1438
208 Ga0501073_0159831 3300049589 Bacteria 1561
209 Ga0501074_0000052 3300049590 Bacteria 56238
210 Ga0501080_0007040 3300049742 Bacteria 10156
211 Ga0501080_0010662 3300049742 Bacteria 8411
212 Ga0501080_0026521 3300049742 Bacteria 5383
213 Ga0501080_0132701 3300049742 Bacteria 2306
214 Ga0501083_0000469 3300049744 Bacteria 25915
215 Ga0501035_0001792 3300049822 Bacteria 21700
216 Ga0501035_0022069 3300049822 Bacteria 5847
217 Ga0501035_0087472 3300049822 Bacteria 2746
218 Ga0501035_0126771 3300049822 Bacteria 2228
219 Ga0501035_0129554 3300049822 Bacteria 2200
220 Ga0501044_0000156 3300049823 Bacteria 84220
221 Ga0501044_0004409 3300049823 Bacteria 15749
222 Ga0501044_0014922 3300049823 Bacteria 8377
223 Ga0501044_0030849 3300049823 Bacteria 5645
224 Ga0501044_0060161 3300049823 Bacteria 3890
225 Ga0501044_0108768 3300049823 Bacteria 2782
226 Ga0501044_0164538 3300049823 Bacteria 2193
227 Ga0495601_0002628 3300053077 Bacteria 10191
228 Ga0495612_0000640 3300053078 Bacteria 14046
229 Ga0500635_0142663 3300053080 Bacteria 910
230 Ga0495619_0002216 3300053085 Bacteria 12869
231 Ga0500578_0000282 3300053086 Bacteria 62821
232 Ga0500578_0011827 3300053086 Bacteria 5638
233 Ga0500643_061785 3300053087 Bacteria 1050
234 Ga0500646_0005168 3300053090 Bacteria 3303
235 Ga0500641_0056202 3300053096 Bacteria 1630
236 Ga0500569_009892 3300053109 Bacteria 2228
237 Ga0500593_127148 3300053117 Bacteria 1024
238 Ga0500642_0003827 3300053130 Bacteria 4619
239 Ga0500652_000383 3300053131 Bacteria 15945
240 Ga0500655_002276 3300053133 Bacteria 3526
241 Ga0500559_0010408 3300053136 Bacteria 3994
242 Ga0500559_0048829 3300053136 Bacteria 1863
243 Ga0500604_0018126 3300053151 Bacteria 1959
244 Ga0500616_0008535 3300053153 Bacteria 6352
245 Ga0500622_0001707 3300053156 Bacteria 17033
246 Ga0500622_0002920 3300053156 Bacteria 11887
247 Ga0500622_0004196 3300053156 Bacteria 9186
248 Ga0500596_003331 3300053735 Bacteria 3074
249 Ga0501082_0146747 3300060353 Bacteria 2048
250 Ga0501082_0288894 3300060353 Bacteria 1428
251 2513232010 2513020051 Bacteria 6053213
252 2587730919 2585428057 Bacteria 6737412
253 2587736046 2585428058 Bacteria 6853932
254 2588295817 2588253510 Bacteria 6901809
255 2600227231 2599185359 Bacteria 4772316
256 2644467760 2643221683 Bacteria 5749203
257 2738944947 2738541317 Bacteria 5340176
258 2739244248 2738543012 Bacteria 7115078
259 2816472520 2816332133 Bacteria 7249298
260 2842752925 2842747753 Bacteria 5578255
261 2857576496 2857576091 Bacteria 5465855
262 2881413308 2881412998 Bacteria 6492157
263 2899806293 2899803654 Bacteria 5577784
264 2913309571 2913308742 Bacteria 5350706
265 2945909473 2945909444 Bacteria 7065066
266 2945988547 2945984333 Bacteria 7358892
267 8033233407 8033232454 Bacteria 3202805
268 Ga0495654_0000462
269 JGI24736J21556_1015987
270 JGI24739J22299_10001284
271 JGI24737J22298_10022090
272 JGI24742J22300_10006529
273 JGI25152J39213_1002258
274 JGI25151J46595_10000077
275 JGI25151J46595_10000639
276 JGI25153J46596_10000537
277 rootH1_10015310
278 Ga0055526_1000296
279 Ga0065165_1001128
280 Ga0070658_10008162
281 Ga0070676_10336450
282 Ga0070683_100001582
283 Ga0070660_100109756
284 Ga0070661_100081966
285 Ga0070692_10037931
286 Ga0070669_100024214
287 Ga0070671_100044731
288 Ga0070671_100527730
289 Ga0070659_100100050
290 Ga0068867_100001468
291 Ga0070684_100002777
292 Ga0068853_100107068
293 Ga0068853_100203821
294 Ga0070665_100012608
295 Ga0068855_100188967
296 Ga0068857_100010700
297 Ga0068854_100119764
298 Ga0068864_100076909
299 Ga0068861_100002167
300 Ga0068860_100010045
301 Ga0068862_100007436
302 Ga0075363_100155363
303 Ga0070712_100062407
304 Ga0075370_10044881
305 Ga0075370_10077424
306 Ga0079104_1015842
307 Ga0105243_10004371
308 Ga0105248_10676890
309 Ga0105237_10022445
310 Ga0105249_10021397
311 Ga0157369_10000456
312 Ga0157378_10067007
313 Ga0163162_10010332
314 Ga0157372_10014402
315 Ga0163163_10555266
316 Ga0157380_10522849
317 Ga0182008_10000207
318 Ga0163161_10029573
319 Ga0207425_1000259
320 Ga0209129_1000175
321 Ga0209673_1007370
322 Ga0209673_1024658
323 Ga0209673_1028937
324 Ga0209676_1003069
325 Ga0209025_1000003
326 Ga0209025_1000018
327 Ga0209564_1000136
328 Ga0209758_1000275
329 Ga0207647_10012466
330 Ga0207645_10009979
331 Ga0207645_10032463
332 Ga0207645_10066857
333 Ga0207671_10025426
334 Ga0207693_10205111
335 Ga0207657_10060674
336 Ga0207657_10062255
337 Ga0207649_10010077
338 Ga0207649_10019337
339 Ga0207681_10011844
340 Ga0207681_10081626
341 Ga0207690_10281854
342 Ga0207709_10005441
343 Ga0207691_10057676
344 Ga0207667_10301333
345 Ga0207712_10260217
346 Ga0207658_10036797
347 Ga0207641_10332803
348 Ga0207648_10000190
349 Ga0207676_10361141
350 Ga0207674_10004125
351 Ga0207675_100004014
352 Ga0207683_10083789
353 Ga0209970_1001100
354 Ga0268266_10011638
355 Ga0268265_10004765
356 Ga0268264_10080676
357 Ga0307513_10010066
358 Ga0307516_10000075
359 Ga0307516_10013066
360 Ga0307405_10007536
361 Ga0307405_10025130
362 Ga0307413_10000189
363 Ga0307413_10005509
364 Ga0307410_10001852
365 Ga0307406_10073342
366 Ga0307406_10255247
367 Ga0307407_10008724
368 Ga0307407_10068537
369 Ga0307412_10020934
370 Ga0307412_10079715
371 Ga0307412_10201715
372 Ga0307409_100000313
373 Ga0307409_100203214
374 Ga0307416_100036406
375 Ga0307414_10000840
376 Ga0307414_10012164
377 Ga0307411_10001191
378 Ga0307411_10003537
379 Ga0307415_100000099
380 Ga0307415_100011033
381 Ga0373923_0006447
382 Ga0373936_0015041
383 Ga0373953_0015148
384 Ga0373957_0057102
385 Ga0373955_0004104
386 Ga0373933_0000440
387 Ga0373937_0001057
388 Ga0395899_0135086
389 Ga0395899_0337157
390 Ga0395905_0440049
391 Ga0395901_0257431
392 Ga0436365_0041228
393 Ga0436365_1387651
394 Ga0451577_0005554
395 Ga0466969_0076949
396 Ga0466961_0260645
397 Ga0466959_0003517
398 Ga0451576_0326567
399 Ga0466967_0219910
400 Ga0495592_0018190
401 Ga0495651_0000375
402 Ga0495653_0000674
403 Ga0495606_0000279
404 Ga0495608_0000164
405 Ga0495630_0002248
406 Ga0495632_0003923
407 Ga0495648_0000113
408 Ga0495652_0031663
409 Ga0495654_0000946
410 Ga0495640_0111014
411 Ga0495586_0055390
412 Ga0495645_0000520
413 Ga0495645_0027612
414 Ga0495667_0001755
415 Ga0495635_0000328
416 Ga0495657_0000858
417 Ga0495599_0000418
418 Ga0495623_0001187
419 Ga0495670_0047261
420 Ga0495600_0000443
421 Ga0495604_0001805
422 Ga0495674_0002919
423 Ga0495680_0013336
424 Ga0495684_0000730
425 Ga0495686_0045653
426 Ga0495602_0014274
427 Ga0496109_0030939
428 Ga0496112_0035044
429 Ga0496113_0002671
430 Ga0496118_0068641
431 Ga0496121_0031660
432 Ga0496121_0115213
433 Ga0496121_0212595
434 Ga0496122_0000034
435 Ga0496123_0000141
436 Ga0496124_0006512
437 Ga0496124_0023619
438 Ga0496124_0122873
439 Ga0501032_0015942
440 Ga0501032_0143143
441 Ga0501033_0000719
442 Ga0501033_0004413
443 Ga0501033_0012222
444 Ga0501034_0177848
445 Ga0501034_0193938
446 Ga0501036_0283250
447 Ga0501037_0000007
448 Ga0501037_0109938
449 Ga0501037_0331518
450 Ga0501038_0015017
451 Ga0501038_0187424
452 Ga0501039_0149409
453 Ga0501039_0154816
454 Ga0501043_0000061
455 Ga0501043_0130357
456 Ga0501046_0063285
457 Ga0501046_0072165
458 Ga0501046_0163525
459 Ga0501046_0166397
460 Ga0501047_0006878
461 Ga0501047_0051689
462 Ga0501047_0087223
463 Ga0501047_0224980
464 Ga0501047_0245786
465 Ga0501047_0329689
466 Ga0501067_0038998
467 Ga0501068_0007756
468 Ga0501069_0000050
469 Ga0501070_0000156
470 Ga0501070_0000454
471 Ga0501070_0041160
472 Ga0501070_0127815
473 Ga0501071_0003644
474 Ga0501071_0217331
475 Ga0501073_0159831
476 Ga0501074_0000052
477 Ga0501080_0007040
478 Ga0501080_0010662
479 Ga0501080_0026521
480 Ga0501080_0132701
481 Ga0501083_0000469
482 Ga0501035_0001792
483 Ga0501035_0022069
484 Ga0501035_0087472
485 Ga0501035_0126771
486 Ga0501035_0129554
487 Ga0501044_0000156
488 Ga0501044_0004409
489 Ga0501044_0014922
490 Ga0501044_0030849
491 Ga0501044_0060161
492 Ga0501044_0108768
493 Ga0501044_0164538
494 Ga0495601_0002628
495 Ga0495612_0000640
496 Ga0500635_0142663
497 Ga0495619_0002216
498 Ga0500578_0000282
499 Ga0500578_0011827
500 Ga0500643_061785
501 Ga0500646_0005168
502 Ga0500641_0056202
503 Ga0500569_009892
504 Ga0500593_127148
505 Ga0500642_0003827
506 Ga0500652_000383
507 Ga0500655_002276
508 Ga0500559_0010408
509 Ga0500559_0048829
510 Ga0500604_0018126
511 Ga0500616_0008535
512 Ga0500622_0001707
513 Ga0500622_0002920
514 Ga0500622_0004196
515 Ga0500596_003331
516 Ga0501082_0146747
517 Ga0501082_0288894
518 2513232010
519 2587730919
520 2587736046
521 2588295817
522 2600227231
523 2644467760
524 2738944947
525 2739244248
526 2816472520
527 2842752925
528 2857576496
529 2881413308
530 2899806293
531 2913309571
532 2945909473
533 2945988547
534 8033233407

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00106

adh_short

short chain dehydrogenase

41

237

0.94

PF08659

KR

KR domain

42

221

0.93

PF13561

adh_short_C2

Enoyl-(Acyl carrier protein) reductase

47

282

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
5cdy-assembly1.cif.gz_D the crystal structure of 3-ketoacyl-(acyl-carrier-protein) reductase (fabg) from yersinia pestis at 2.85a resolution 0.9446 8 234
3tfo-assembly1.cif.gz_C crystal structure of a putative 3-oxoacyl-(acyl-carrier-protein) reductase from sinorhizobium meliloti 0.9369 13 219
8sy8-assembly1.cif.gz_B-2 crystal structure of tsac 0.9337 9 234
5cdy-assembly1.cif.gz_B the crystal structure of 3-ketoacyl-(acyl-carrier-protein) reductase (fabg) from yersinia pestis at 2.85a resolution 0.9314 8 238
1w8d-assembly1.cif.gz_B binary structure of human decr. 0.9313 6 193
ID Description Score Start End Superfamily
2et6A02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9479 8 244 3.40.50.720
af_Q0JDN0_53_323_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9439 13 189 3.40.50.720
af_Q6PKH6_18_219_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9429 2 188 3.40.50.720
af_C6T421_12_106_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9324 5 93 3.40.50.720
2ehdA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9309 11 234 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A519JXM6-F1-model_v4 SDR family NAD(P)-dependent oxidoreductase 0.9775 6 191 GO:0016491
AF-A0A5A7N6I7-F1-model_v4 3-oxoacyl-ACP reductase 0.9726 6 243 GO:0016491
AF-A0A519JXM6-F1-model_v4 SDR family NAD(P)-dependent oxidoreductase 0.9723 6 191 GO:0016491
AF-A0A3G6UNI4-F1-model_v4 SDR family oxidoreductase 0.957 11 193 GO:0016020
GO:0016491
AF-A0A317I3N6-F1-model_v4 Oxidoreductase 0.9543 11 191 GO:0016020
GO:0016491

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