F375052

General Info

Members Datasets Scaffolds Average Seq Length
267 201 263 249

Family's Representative Sequence

Representative Sequence 3300048919|Ga0496116_0000413|Ga0496116_0000413_42211_43023
Length 270
Sequence LCSIHNPELFLKDNKNMDIKNYSAIVSGGASGMGKATATALSNAGAKVAIFDVNKEAAEKVAAEINGIAYACDVTNAESVESAIQYVKEKHGIARICINCAGIVRGKRIVGKEGPMPLEEFKQVIDINLIGTFNLMRLVAASMTTLDPLGDSGERGVIINTASVAAYEGQIGQAAYSASKGAIVSLTLPAARELAQFGIRVVTIAPGLVDTPMFEKLPPDARASLANTVPFPKRLARPDEFAKLALHIIENEMINGEVIRLDGALRMQAK

Samples

Sample ID Description Type Environment
1 2643221591 Devosia sp. Root685 Isolate Unclassified
2 2684623035 Frankia sp. NRRL B-16219 Isolate Rhizosphere
3 2895880812 Frankia sp. BMG5.11 Isolate Unclassified
4 2915358134 Pseudonocardia pini CAP47R Isolate Unclassified
5 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
6 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
7 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
8 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
9 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
10 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
11 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
12 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
13 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
14 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
15 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
16 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
17 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
18 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
19 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
20 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
21 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
22 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
23 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
24 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
25 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
26 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
27 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
28 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
29 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
30 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
31 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
32 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
33 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
34 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
35 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
36 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
37 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
38 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
39 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
40 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
41 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
42 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
43 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
44 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
45 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
46 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
47 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
48 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
50 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
51 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
52 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
53 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
54 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
55 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
56 3300012475 Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.10.old.080610 Metagenome Rhizosphere
57 3300012500 Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.4.old.080610 Metagenome Rhizosphere
58 3300012503 Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.5.old.080610_R Metagenome Rhizosphere
59 3300012512 Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.3.old.270510 Metagenome Rhizosphere
60 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
61 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
62 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
63 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
64 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
65 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
66 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
67 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
68 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
69 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
70 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
71 3300015685 Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.5_G12 Metagenome Unclassified
72 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
73 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
75 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
76 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
77 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
78 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
79 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
80 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
108 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
109 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
110 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
111 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
112 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
113 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
114 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
115 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
116 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
117 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
118 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
119 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
120 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
121 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
122 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
123 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
124 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
125 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
126 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
127 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
128 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
129 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
130 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
131 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
132 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
133 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
134 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
135 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
136 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
137 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
138 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
139 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
140 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
141 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
142 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
143 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
144 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
145 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
146 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
147 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
148 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
149 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
150 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
151 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
152 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
153 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
154 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
155 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
156 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
157 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
158 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
159 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
160 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
161 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
162 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
163 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
164 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
165 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
166 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
167 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
168 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
169 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
170 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
171 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
172 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
173 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
174 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
175 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
176 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
177 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
178 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
179 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
180 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
181 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
182 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
183 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
184 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
185 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
186 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
187 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
188 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
189 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
190 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
191 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
192 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
193 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
194 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
195 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
196 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
197 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
198 3300053120 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere Metagenome Endosphere
199 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
200 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
201 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.5
Metatranscriptomes 0
Isolates 1.5

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.36
Nodule 0
Rhizoplane 6.74
Rhizosphere 79.03
Stem 0
Stem Tuber 0
Unclassified 4.87

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10000402 3300003203 Bacteria 19922
2 rootH2_10006469 3300003320 Bacteria 26810
3 Ga0055539_1000576 3300003752 Bacteria 10355
4 Ga0055533_1006090 3300003756 Bacteria 1831
5 Ga0055527_1000082 3300003760 Bacteria 75048
6 Ga0055535_1000143 3300003761 Bacteria 75049
7 Ga0055542_1000190 3300003762 Bacteria 75049
8 Ga0055529_1000217 3300003763 Bacteria 75049
9 Ga0070690_100009783 3300005330 Bacteria 5563
10 Ga0070670_100286063 3300005331 Bacteria 1440
11 Ga0068868_100082502 3300005338 Bacteria 2578
12 Ga0070671_100005466 3300005355 Bacteria 10141
13 Ga0070671_100038149 3300005355 Bacteria 3988
14 Ga0070673_100156404 3300005364 Bacteria 1935
15 Ga0070667_100005460 3300005367 Bacteria 10619
16 Ga0070709_10043771 3300005434 Bacteria 2770
17 Ga0070713_100007288 3300005436 Bacteria 7747
18 Ga0070710_10001552 3300005437 Bacteria 10857
19 Ga0070711_100000979 3300005439 Bacteria 15125
20 Ga0070678_100024067 3300005456 Bacteria 4070
21 Ga0070678_100046518 3300005456 Bacteria 3111
22 Ga0070681_10000211 3300005458 Bacteria 45377
23 Ga0070672_100188679 3300005543 Bacteria 1720
24 Ga0070686_100180583 3300005544 Bacteria 1499
25 Ga0070704_100097689 3300005549 Bacteria 2205
26 Ga0070704_100333407 3300005549 Bacteria 1275
27 Ga0068855_100005583 3300005563 Bacteria 15348
28 Ga0068855_100025603 3300005563 Bacteria 7058
29 Ga0068855_100761092 3300005563 Bacteria 1032
30 Ga0068856_100067982 3300005614 Bacteria 3521
31 Ga0068859_100012130 3300005617 Bacteria 8661
32 Ga0068859_100021037 3300005617 Bacteria 6547
33 Ga0068859_100045276 3300005617 Bacteria 4421
34 Ga0068859_100326601 3300005617 Bacteria 1628
35 Ga0068863_100013467 3300005841 Bacteria 7888
36 Ga0068863_100015162 3300005841 Bacteria 7403
37 Ga0068863_100038573 3300005841 Bacteria 4544
38 Ga0068858_100010815 3300005842 Bacteria 8627
39 Ga0068860_100005298 3300005843 Bacteria 13094
40 Ga0068862_100040196 3300005844 Bacteria 3976
41 Ga0081540_1061117 3300005983 Bacteria 1798
42 Ga0081539_10003329 3300005985 Bacteria 20019
43 Ga0075363_100005178 3300006048 Bacteria 5771
44 Ga0075364_10015544 3300006051 Bacteria 4722
45 Ga0070715_10011954 3300006163 Bacteria 3141
46 Ga0070712_100008413 3300006175 Bacteria 6490
47 Ga0075366_10072608 3300006195 Bacteria 2050
48 Ga0075370_10104886 3300006353 Bacteria 1638
49 Ga0068871_100024924 3300006358 Bacteria 4646
50 Ga0075428_100009331 3300006844 Bacteria 10882
51 Ga0068865_100012012 3300006881 Bacteria 5441
52 Ga0068865_100112328 3300006881 Bacteria 2012
53 Ga0097620_100012130 3300006931 Bacteria 8661
54 Ga0097620_100021037 3300006931 Bacteria 6547
55 Ga0105240_10008645 3300009093 Bacteria 14548
56 Ga0105240_10290543 3300009093 Bacteria 1874
57 Ga0111539_10003432 3300009094 Bacteria 20872
58 Ga0105245_10010744 3300009098 Bacteria 7965
59 Ga0105245_10043098 3300009098 Bacteria 4026
60 Ga0105241_10037253 3300009174 Bacteria 3663
61 Ga0105242_10000991 3300009176 Bacteria 22219
62 Ga0105242_10009162 3300009176 Bacteria 7599
63 Ga0105248_10008592 3300009177 Bacteria 11215
64 Ga0105248_10047221 3300009177 Bacteria 4828
65 Ga0105237_10051854 3300009545 Bacteria 4121
66 Ga0105237_10059041 3300009545 Bacteria 3838
67 Ga0105237_10450308 3300009545 Bacteria 1293
68 Ga0105249_10001384 3300009553 Bacteria 21229
69 Ga0105239_10000225 3300010375 Bacteria 83296
70 Ga0105239_10014367 3300010375 Bacteria 8786
71 Ga0105239_10022279 3300010375 Bacteria 6984
72 Ga0157317_1003163 3300012475 Bacteria 1013
73 Ga0157314_1004678 3300012500 Bacteria 1013
74 Ga0157313_1002597 3300012503 Bacteria 1096
75 Ga0157327_1009407 3300012512 Bacteria 900
76 Ga0157370_10511271 3300013104 Bacteria 1103
77 Ga0157369_10004509 3300013105 Bacteria 16394
78 Ga0157374_10036995 3300013296 Bacteria 4476
79 Ga0157378_10007232 3300013297 Bacteria 9695
80 Ga0163162_10058895 3300013306 Bacteria 3871
81 Ga0163162_10173797 3300013306 Bacteria 2279
82 Ga0157372_10022565 3300013307 Bacteria 6811
83 Ga0157372_10532491 3300013307 Bacteria 1369
84 Ga0157375_10010381 3300013308 Bacteria 8201
85 Ga0157375_10190458 3300013308 Bacteria 2206
86 Ga0163163_10003540 3300014325 Bacteria 13270
87 Ga0157380_10188907 3300014326 Bacteria 1817
88 Ga0157379_10004973 3300014968 Bacteria 11407
89 Ga0157379_10034963 3300014968 Bacteria 4479
90 Ga0157379_10241263 3300014968 Bacteria 1639
91 Ga0157376_10009821 3300014969 Bacteria 6976
92 Ga0157376_10153589 3300014969 Bacteria 2079
93 Ga0183369_1008 3300015685 Bacteria 346514
94 Ga0213872_10152016 3300021361 Bacteria 1011
95 Ga0209566_104162 3300025225 Bacteria 2029
96 Ga0209674_100119 3300025226 Bacteria 135468
97 Ga0209674_100426 3300025226 Bacteria 20351
98 Ga0209672_100016 3300025228 Bacteria 522604
99 Ga0209258_100012 3300025242 Bacteria 825544
100 Ga0209677_101300 3300025253 Bacteria 11113
101 Ga0209148_1000014 3300025254 Bacteria 925277
102 Ga0209455_1000014 3300025272 Bacteria 806601
103 Ga0207685_10196073 3300025905 Bacteria 946
104 Ga0207699_10070085 3300025906 Bacteria 2140
105 Ga0207707_10000018 3300025912 Bacteria 215518
106 Ga0207695_10328012 3300025913 Bacteria 1419
107 Ga0207671_10012522 3300025914 Bacteria 6812
108 Ga0207671_10166663 3300025914 Bacteria 1708
109 Ga0207693_10000007 3300025915 Bacteria 173735
110 Ga0207663_10053956 3300025916 Bacteria 2514
111 Ga0207660_10060216 3300025917 Bacteria 2728
112 Ga0207660_10084277 3300025917 Bacteria 2343
113 Ga0207700_10003867 3300025928 Bacteria 8750
114 Ga0207664_10047392 3300025929 Bacteria 3376
115 Ga0207644_10032852 3300025931 Bacteria 3623
116 Ga0207644_10098742 3300025931 Bacteria 2189
117 Ga0207686_10011839 3300025934 Bacteria 4786
118 Ga0207686_10056765 3300025934 Bacteria 2462
119 Ga0207704_10030257 3300025938 Bacteria 3033
120 Ga0207704_10124402 3300025938 Bacteria 1772
121 Ga0207665_10007557 3300025939 Bacteria 7181
122 Ga0207665_10020405 3300025939 Bacteria 4354
123 Ga0207691_10203632 3300025940 Bacteria 1721
124 Ga0207691_10399826 3300025940 Bacteria 1172
125 Ga0207711_10025133 3300025941 Bacteria 4997
126 Ga0207667_10015119 3300025949 Bacteria 8776
127 Ga0207667_10025500 3300025949 Bacteria 6469
128 Ga0207712_10000048 3300025961 Bacteria 160050
129 Ga0207668_10004357 3300025972 Bacteria 8312
130 Ga0207658_10012844 3300025986 Bacteria 5719
131 Ga0207658_10076831 3300025986 Bacteria 2545
132 Ga0207677_10017815 3300026023 Bacteria 4247
133 Ga0207703_10036776 3300026035 Bacteria 3898
134 Ga0207703_10064822 3300026035 Bacteria 3000
135 Ga0207641_10009757 3300026088 Bacteria 7907
136 Ga0207648_10044474 3300026089 Bacteria 3895
137 Ga0207683_10120228 3300026121 Bacteria 2357
138 Ga0268265_10084057 3300028380 Bacteria 2522
139 Ga0268264_10037880 3300028381 Bacteria 3977
140 Ga0307515_10028247 3300028794 Bacteria 9543
141 Ga0265338_10004792 3300028800 Bacteria 18080
142 Ga0265332_10037109 3300031238 Bacteria 2114
143 Ga0265325_10000927 3300031241 Bacteria 21168
144 Ga0265339_10003718 3300031249 Bacteria 10642
145 Ga0265331_10002332 3300031250 Bacteria 12901
146 Ga0265316_10341539 3300031344 Bacteria 1085
147 Ga0265313_10000946 3300031595 Bacteria 28813
148 Ga0265314_10000158 3300031711 Bacteria 102763
149 Ga0265342_10029996 3300031712 Bacteria 3374
150 Ga0307516_10018248 3300031730 Bacteria 7296
151 Ga0307413_10544709 3300031824 Bacteria 940
152 Ga0307416_100145050 3300032002 Bacteria 2166
153 Ga0307414_10177511 3300032004 Bacteria 1709
154 Ga0307414_10317321 3300032004 Bacteria 1325
155 Ga0307414_10326331 3300032004 Bacteria 1308
156 Ga0307411_10149141 3300032005 Bacteria 1736
157 Ga0373955_0040589 3300035172 Bacteria 2490
158 Ga0373935_0059961 3300035692 Bacteria 2434
159 Ga0373927_0037805 3300035695 Bacteria 3136
160 Ga0373933_0034913 3300035724 Bacteria 2934
161 Ga0373947_0122338 3300035725 Bacteria 1654
162 Ga0373937_0012713 3300036401 Bacteria 7408
163 Ga0373937_0013555 3300036401 Bacteria 7182
164 Ga0316584_0068994 3300036712 Bacteria 2650
165 Ga0316584_0140389 3300036712 Bacteria 1802
166 Ga0373925_0052130 3300037068 Bacteria 3057
167 Ga0395900_0000175 3300037418 Bacteria 102937
168 Ga0395900_0713373 3300037418 Bacteria 936
169 Ga0395898_0061562 3300037466 Bacteria 3646
170 Ga0395898_0192698 3300037466 Bacteria 1948
171 Ga0436364_0669786 3300037853 Bacteria 2376
172 Ga0395901_0394362 3300038443 Bacteria 1423
173 Ga0436361_0059271 3300039447 Bacteria 7166
174 Ga0436363_1082673 3300039450 Bacteria 1734
175 Ga0451577_0050037 3300042876 Bacteria 3730
176 Ga0466966_0207300 3300044684 Bacteria 1185
177 Ga0451576_0000056 3300045051 Bacteria 303398
178 Ga0466967_0476619 3300045976 Bacteria 1222
179 Ga0495627_002198 3300046453 Bacteria 9718
180 Ga0495650_0004281 3300046471 Bacteria 9858
181 Ga0495580_0002818 3300046472 Bacteria 14949
182 Ga0495580_0067386 3300046472 Bacteria 2504
183 Ga0495580_0110499 3300046472 Bacteria 1909
184 Ga0495582_0162571 3300046473 Bacteria 1270
185 Ga0495618_0103721 3300046514 Bacteria 1821
186 Ga0495628_0342692 3300046516 Bacteria 1100
187 Ga0495587_0021488 3300046536 Bacteria 3980
188 Ga0495657_0112045 3300046675 Bacteria 1728
189 Ga0495647_0073977 3300046681 Bacteria 1369
190 Ga0495624_0357155 3300046690 Bacteria 879
191 Ga0495674_0241728 3300047319 Bacteria 1488
192 Ga0495681_0004202 3300047470 Bacteria 9873
193 Ga0496100_0131185 3300048903 Bacteria 1765
194 Ga0496101_0028404 3300048904 Bacteria 3904
195 Ga0496102_0002281 3300048905 Bacteria 16397
196 Ga0496102_0105926 3300048905 Bacteria 2616
197 Ga0496104_0000048 3300048907 Bacteria 147443
198 Ga0496104_0559229 3300048907 Bacteria 1054
199 Ga0496105_0000010 3300048908 Bacteria 309880
200 Ga0496105_0028384 3300048908 Bacteria 4575
201 Ga0496106_0080827 3300048909 Bacteria 2496
202 Ga0496106_0369693 3300048909 Bacteria 1152
203 Ga0496107_0428408 3300048910 Bacteria 983
204 Ga0496108_0012925 3300048911 Bacteria 6803
205 Ga0496109_0008037 3300048912 Bacteria 8942
206 Ga0496110_0090507 3300048913 Bacteria 2735
207 Ga0496112_0073158 3300048915 Bacteria 3388
208 Ga0496114_0027405 3300048917 Bacteria 4666
209 Ga0496115_0017511 3300048918 Bacteria 5480
210 Ga0496115_0044643 3300048918 Bacteria 3537
211 Ga0496116_0000413 3300048919 Bacteria 61050
212 Ga0496121_0000976 3300048924 Bacteria 51230
213 Ga0496121_0317438 3300048924 Bacteria 1050
214 Ga0496125_0306612 3300048928 Bacteria 970
215 Ga0501033_0039788 3300049570 Bacteria 3511
216 Ga0501033_0101612 3300049570 Bacteria 2098
217 Ga0501034_0092277 3300049571 Bacteria 3025
218 Ga0501037_0099714 3300049573 Bacteria 2098
219 Ga0501037_0281979 3300049573 Bacteria 1157
220 Ga0501038_0068499 3300049574 Bacteria 3016
221 Ga0501038_0400897 3300049574 Bacteria 1061
222 Ga0501039_0099827 3300049575 Bacteria 2265
223 Ga0501041_0257823 3300049577 Bacteria 1096
224 Ga0501043_0074092 3300049579 Bacteria 2674
225 Ga0501047_0037939 3300049581 Bacteria 4660
226 Ga0501047_0719626 3300049581 Bacteria 815
227 Ga0501067_0170867 3300049583 Bacteria 1211
228 Ga0501068_0142738 3300049584 Bacteria 1501
229 Ga0501070_0056186 3300049586 Bacteria 3263
230 Ga0501070_0311042 3300049586 Bacteria 1282
231 Ga0501071_0009923 3300049587 Bacteria 6360
232 Ga0501072_0194072 3300049588 Bacteria 1619
233 Ga0501073_0000016 3300049589 Bacteria 156984
234 Ga0501073_0008746 3300049589 Bacteria 7497
235 Ga0501074_0000218 3300049590 Bacteria 31560
236 Ga0501074_0112630 3300049590 Bacteria 1947
237 Ga0501074_0192025 3300049590 Bacteria 1456
238 Ga0501075_0032332 3300049591 Bacteria 3886
239 Ga0501076_0017892 3300049592 Bacteria 5389
240 Ga0501077_0160526 3300049593 Bacteria 1427
241 Ga0501080_0025130 3300049742 Bacteria 5529
242 Ga0501080_0033986 3300049742 Bacteria 4761
243 Ga0501080_0076235 3300049742 Bacteria 3119
244 Ga0501080_0454954 3300049742 Bacteria 1147
245 Ga0501081_0128772 3300049743 Bacteria 1807
246 Ga0501083_0010535 3300049744 Bacteria 6507
247 Ga0501035_0277128 3300049822 Bacteria 1418
248 Ga0501044_0112925 3300049823 Bacteria 2724
249 Ga0501044_0142931 3300049823 Bacteria 2380
250 Ga0501044_0629807 3300049823 Bacteria 963
251 Ga0501044_0850137 3300049823 Bacteria 789
252 nmdc:mga03683_45489_c1 3300050489 Bacteria 1816
253 nmdc:mga03n38_51407_c1 3300050490 Bacteria 1840
254 nmdc:mga00v17_331576_c1 3300050491 Bacteria 989
255 nmdc:mga06z11_152553_c1 3300050494 Bacteria 1315
256 nmdc:mga06z11_90280_c1 3300050494 Bacteria 1662
257 nmdc:mga08y16_5483_c1 3300050511 Bacteria 13262
258 Ga0495612_0228030 3300053078 Bacteria 826
259 Ga0500595_077637 3300053119 Bacteria 976
260 Ga0500597_127071 3300053120 Bacteria 1103
261 Ga0501084_0066756 3300054114 Bacteria 3010
262 Ga0501082_0613191 3300060353 Bacteria 952
263 Ga0530510_0099785 3300061734 Bacteria 2123

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300053078 Ga0495612_0228030 Ga0495612_0228030_38_661 181
2 3300037853 Ga0436364_0669786 Ga0436364_0669786_1152_1916 196
3 3300049823 Ga0501044_0850137 Ga0501044_0850137_60_740 197
4 3300046690 Ga0495624_0357155 Ga0495624_0357155_101_787 204
5 3300005617 Ga0068859_100021037 Ga0068859_1000210373 208
6 3300006931 Ga0097620_100021037 Ga0097620_1000210373 208
7 3300009177 Ga0105248_10008592 Ga0105248_100085924 208
8 3300014968 Ga0157379_10004973 Ga0157379_100049732 208
9 3300021361 Ga0213872_10152016 Ga0213872_101520161 208
10 3300025941 Ga0207711_10025133 Ga0207711_100251336 208
11 3300025972 Ga0207668_10004357 Ga0207668_100043574 208
12 3300028381 Ga0268264_10037880 Ga0268264_100378803 208
13 3300039447 Ga0436361_0059271 Ga0436361_0059271_4162_4923 208
14 3300048903 Ga0496100_0131185 Ga0496100_0131185_936_1697 208
15 3300005367 Ga0070667_100005460 Ga0070667_1000054605 209
16 3300005844 Ga0068862_100040196 Ga0068862_1000401963 209
17 3300014325 Ga0163163_10003540 Ga0163163_100035403 209
18 3300025986 Ga0207658_10012844 Ga0207658_100128443 209
19 3300026035 Ga0207703_10064822 Ga0207703_100648224 209
20 3300028380 Ga0268265_10084057 Ga0268265_100840572 209
21 3300003320 rootH2_10006469 rootH2_1000646929 210
22 3300032004 Ga0307414_10317321 Ga0307414_103173212 210
23 3300042876 Ga0451577_0050037 Ga0451577_0050037_2726_3490 210
24 3300045051 Ga0451576_0000056 Ga0451576_0000056_132320_133084 210
25 3300045976 Ga0466967_0476619 Ga0466967_0476619_87_848 210
26 3300009093 Ga0105240_10290543 Ga0105240_102905432 211
27 3300009545 Ga0105237_10051854 Ga0105237_100518542 211
28 3300010375 Ga0105239_10000225 Ga0105239_1000022552 211
29 3300025914 Ga0207671_10166663 Ga0207671_101666632 211
30 3300035695 Ga0373927_0037805 Ga0373927_0037805_1975_2736 211
31 3300048909 Ga0496106_0369693 Ga0496106_0369693_119_886 212
32 3300031238 Ga0265332_10037109 Ga0265332_100371092 213
33 3300032002 Ga0307416_100145050 Ga0307416_1001450503 213
34 3300049581 Ga0501047_0719626 Ga0501047_0719626_10_723 213
35 3300014326 Ga0157380_10188907 Ga0157380_101889072 214
36 3300050494 nmdc:mga06z11_90280_c1 nmdc:mga06z11_90280_c1_314_1075 214
37 3300003752 Ga0055539_1000576 Ga0055539_10005769 216
38 3300003756 Ga0055533_1006090 Ga0055533_10060902 216
39 3300003760 Ga0055527_1000082 Ga0055527_100008245 216
40 3300003761 Ga0055535_1000143 Ga0055535_100014345 216
41 3300003762 Ga0055542_1000190 Ga0055542_100019031 216
42 3300003763 Ga0055529_1000217 Ga0055529_100021731 216
43 3300005549 Ga0070704_100333407 Ga0070704_1003334072 216
44 3300025225 Ga0209566_104162 Ga0209566_1041622 216
45 3300025226 Ga0209674_100119 Ga0209674_10011973 216
46 3300025226 Ga0209674_100426 Ga0209674_1004268 216
47 3300025228 Ga0209672_100016 Ga0209672_100016357 216
48 3300025242 Ga0209258_100012 Ga0209258_100012498 216
49 3300025253 Ga0209677_101300 Ga0209677_1013006 216
50 3300025254 Ga0209148_1000014 Ga0209148_1000014158 216
51 3300025272 Ga0209455_1000014 Ga0209455_100001446 216
52 3300028794 Ga0307515_10028247 Ga0307515_100282478 216
53 3300005355 Ga0070671_100038149 Ga0070671_1000381492 218
54 3300005841 Ga0068863_100038573 Ga0068863_1000385734 218
55 3300025931 Ga0207644_10032852 Ga0207644_100328524 218
56 3300010375 Ga0105239_10014367 Ga0105239_100143677 219
57 3300012475 Ga0157317_1003163 Ga0157317_10031632 219
58 3300012500 Ga0157314_1004678 Ga0157314_10046781 219
59 3300006051 Ga0075364_10015544 Ga0075364_100155443 221
60 3300048928 Ga0496125_0306612 Ga0496125_0306612_138_923 221
61 3300050491 nmdc:mga00v17_331576_c1 nmdc:mga00v17_331576_c1_22_822 221
62 3300053119 Ga0500595_077637 Ga0500595_077637_106_867 222
63 3300049583 Ga0501067_0170867 Ga0501067_0170867_32_793 223
64 3300049586 Ga0501070_0056186 Ga0501070_0056186_1732_2493 223
65 3300049742 Ga0501080_0076235 Ga0501080_0076235_599_1360 223
66 3300049744 Ga0501083_0010535 Ga0501083_0010535_422_1183 223
67 iso_pu_bacteria 2684623035 2686539999 223
68 iso_pu_bacteria 2895880812 2895888817 223
69 3300028800 Ga0265338_10004792 Ga0265338_100047926 224
70 3300031241 Ga0265325_10000927 Ga0265325_1000092710 224
71 3300031249 Ga0265339_10003718 Ga0265339_100037183 224
72 3300031250 Ga0265331_10002332 Ga0265331_100023323 224
73 3300031595 Ga0265313_10000946 Ga0265313_100009468 224
74 3300031711 Ga0265314_10000158 Ga0265314_100001583 224
75 3300031712 Ga0265342_10029996 Ga0265342_100299962 224
76 3300049573 Ga0501037_0281979 Ga0501037_0281979_157_927 224
77 3300049584 Ga0501068_0142738 Ga0501068_0142738_400_1170 224
78 3300049589 Ga0501073_0000016 Ga0501073_0000016_58178_58948 224
79 3300049590 Ga0501074_0000218 Ga0501074_0000218_27592_28362 224
80 iso_pu_bacteria 2915358134 2915359865 224
81 3300014968 Ga0157379_10241263 Ga0157379_102412632 225
82 iso_pu_bacteria 2643221591 2643966892 225
83 3300031344 Ga0265316_10341539 Ga0265316_103415391 226
84 3300036712 Ga0316584_0068994 Ga0316584_0068994_422_1174 226
85 3300036712 Ga0316584_0140389 Ga0316584_0140389_64_816 226
86 3300005983 Ga0081540_1061117 Ga0081540_10611172 227
87 3300048905 Ga0496102_0002281 Ga0496102_0002281_8400_9158 228
88 3300049589 Ga0501073_0008746 Ga0501073_0008746_4523_5281 228
89 3300003203 JGI25406J46586_10000402 JGI25406J46586_1000040211 229
90 3300005330 Ga0070690_100009783 Ga0070690_1000097832 229
91 3300005331 Ga0070670_100286063 Ga0070670_1002860632 229
92 3300005338 Ga0068868_100082502 Ga0068868_1000825023 229
93 3300005355 Ga0070671_100005466 Ga0070671_1000054662 229
94 3300005364 Ga0070673_100156404 Ga0070673_1001564042 229
95 3300005434 Ga0070709_10043771 Ga0070709_100437712 229
96 3300005436 Ga0070713_100007288 Ga0070713_1000072885 229
97 3300005437 Ga0070710_10001552 Ga0070710_100015522 229
98 3300005439 Ga0070711_100000979 Ga0070711_1000009792 229
99 3300005456 Ga0070678_100024067 Ga0070678_1000240673 229
100 3300005456 Ga0070678_100046518 Ga0070678_1000465182 229
101 3300005458 Ga0070681_10000211 Ga0070681_1000021147 229
102 3300005543 Ga0070672_100188679 Ga0070672_1001886792 229
103 3300005544 Ga0070686_100180583 Ga0070686_1001805832 229
104 3300005549 Ga0070704_100097689 Ga0070704_1000976892 229
105 3300005563 Ga0068855_100005583 Ga0068855_1000055834 229
106 3300005563 Ga0068855_100025603 Ga0068855_1000256034 229
107 3300005563 Ga0068855_100761092 Ga0068855_1007610922 229
108 3300005614 Ga0068856_100067982 Ga0068856_1000679823 229
109 3300005617 Ga0068859_100012130 Ga0068859_1000121307 229
110 3300005617 Ga0068859_100045276 Ga0068859_1000452763 229
111 3300005617 Ga0068859_100326601 Ga0068859_1003266012 229
112 3300005841 Ga0068863_100013467 Ga0068863_1000134674 229
113 3300005841 Ga0068863_100015162 Ga0068863_1000151624 229
114 3300005842 Ga0068858_100010815 Ga0068858_1000108156 229
115 3300005843 Ga0068860_100005298 Ga0068860_1000052986 229
116 3300005985 Ga0081539_10003329 Ga0081539_100033298 229
117 3300006048 Ga0075363_100005178 Ga0075363_1000051787 229
118 3300006163 Ga0070715_10011954 Ga0070715_100119542 229
119 3300006175 Ga0070712_100008413 Ga0070712_1000084134 229
120 3300006195 Ga0075366_10072608 Ga0075366_100726082 229
121 3300006353 Ga0075370_10104886 Ga0075370_101048862 229
122 3300006358 Ga0068871_100024924 Ga0068871_1000249244 229
123 3300006844 Ga0075428_100009331 Ga0075428_10000933112 229
124 3300006881 Ga0068865_100012012 Ga0068865_1000120122 229
125 3300006881 Ga0068865_100112328 Ga0068865_1001123282 229
126 3300006931 Ga0097620_100012130 Ga0097620_1000121305 229
127 3300009093 Ga0105240_10008645 Ga0105240_100086459 229
128 3300009094 Ga0111539_10003432 Ga0111539_1000343212 229
129 3300009098 Ga0105245_10010744 Ga0105245_100107446 229
130 3300009098 Ga0105245_10043098 Ga0105245_100430985 229
131 3300009174 Ga0105241_10037253 Ga0105241_100372533 229
132 3300009176 Ga0105242_10000991 Ga0105242_100009916 229
133 3300009176 Ga0105242_10009162 Ga0105242_100091622 229
134 3300009177 Ga0105248_10047221 Ga0105248_100472214 229
135 3300009545 Ga0105237_10059041 Ga0105237_100590412 229
136 3300009545 Ga0105237_10450308 Ga0105237_104503082 229
137 3300009553 Ga0105249_10001384 Ga0105249_1000138416 229
138 3300010375 Ga0105239_10022279 Ga0105239_100222796 229
139 3300012503 Ga0157313_1002597 Ga0157313_10025971 229
140 3300012512 Ga0157327_1009407 Ga0157327_10094071 229
141 3300013104 Ga0157370_10511271 Ga0157370_105112712 229
142 3300013105 Ga0157369_10004509 Ga0157369_1000450910 229
143 3300013296 Ga0157374_10036995 Ga0157374_100369953 229
144 3300013297 Ga0157378_10007232 Ga0157378_100072323 229
145 3300013306 Ga0163162_10058895 Ga0163162_100588954 229
146 3300013306 Ga0163162_10173797 Ga0163162_101737972 229
147 3300013307 Ga0157372_10022565 Ga0157372_100225653 229
148 3300013307 Ga0157372_10532491 Ga0157372_105324912 229
149 3300013308 Ga0157375_10010381 Ga0157375_100103812 229
150 3300013308 Ga0157375_10190458 Ga0157375_101904583 229
151 3300014968 Ga0157379_10034963 Ga0157379_100349632 229
152 3300014969 Ga0157376_10009821 Ga0157376_100098214 229
153 3300014969 Ga0157376_10153589 Ga0157376_101535892 229
154 3300015685 Ga0183369_1008 Ga0183369_1008259 229
155 3300025905 Ga0207685_10196073 Ga0207685_101960732 229
156 3300025906 Ga0207699_10070085 Ga0207699_100700852 229
157 3300025912 Ga0207707_10000018 Ga0207707_10000018171 229
158 3300025913 Ga0207695_10328012 Ga0207695_103280122 229
159 3300025914 Ga0207671_10012522 Ga0207671_100125225 229
160 3300025915 Ga0207693_10000007 Ga0207693_1000000792 229
161 3300025916 Ga0207663_10053956 Ga0207663_100539562 229
162 3300025917 Ga0207660_10060216 Ga0207660_100602162 229
163 3300025917 Ga0207660_10084277 Ga0207660_100842772 229
164 3300025928 Ga0207700_10003867 Ga0207700_100038672 229
165 3300025929 Ga0207664_10047392 Ga0207664_100473923 229
166 3300025931 Ga0207644_10098742 Ga0207644_100987422 229
167 3300025934 Ga0207686_10011839 Ga0207686_100118393 229
168 3300025934 Ga0207686_10056765 Ga0207686_100567652 229
169 3300025938 Ga0207704_10030257 Ga0207704_100302571 229
170 3300025938 Ga0207704_10124402 Ga0207704_101244022 229
171 3300025939 Ga0207665_10007557 Ga0207665_100075572 229
172 3300025939 Ga0207665_10020405 Ga0207665_100204052 229
173 3300025940 Ga0207691_10203632 Ga0207691_102036322 229
174 3300025940 Ga0207691_10399826 Ga0207691_103998262 229
175 3300025949 Ga0207667_10015119 Ga0207667_100151194 229
176 3300025949 Ga0207667_10025500 Ga0207667_100255002 229
177 3300025961 Ga0207712_10000048 Ga0207712_10000048135 229
178 3300025986 Ga0207658_10076831 Ga0207658_100768312 229
179 3300026023 Ga0207677_10017815 Ga0207677_100178154 229
180 3300026035 Ga0207703_10036776 Ga0207703_100367764 229
181 3300026088 Ga0207641_10009757 Ga0207641_100097576 229
182 3300026089 Ga0207648_10044474 Ga0207648_100444744 229
183 3300026121 Ga0207683_10120228 Ga0207683_101202282 229
184 3300031730 Ga0307516_10018248 Ga0307516_100182486 229
185 3300031824 Ga0307413_10544709 Ga0307413_105447091 229
186 3300032004 Ga0307414_10177511 Ga0307414_101775112 229
187 3300032004 Ga0307414_10326331 Ga0307414_103263311 229
188 3300032005 Ga0307411_10149141 Ga0307411_101491411 229
189 3300035172 Ga0373955_0040589 Ga0373955_0040589_1049_1816 229
190 3300035692 Ga0373935_0059961 Ga0373935_0059961_432_1199 229
191 3300035724 Ga0373933_0034913 Ga0373933_0034913_1620_2387 229
192 3300035725 Ga0373947_0122338 Ga0373947_0122338_345_1112 229
193 3300036401 Ga0373937_0012713 Ga0373937_0012713_2788_3555 229
194 3300036401 Ga0373937_0013555 Ga0373937_0013555_1014_1781 229
195 3300037068 Ga0373925_0052130 Ga0373925_0052130_1482_2249 229
196 3300037418 Ga0395900_0000175 Ga0395900_0000175_85105_85899 229
197 3300037418 Ga0395900_0713373 Ga0395900_0713373_92_859 229
198 3300037466 Ga0395898_0061562 Ga0395898_0061562_166_960 229
199 3300037466 Ga0395898_0192698 Ga0395898_0192698_744_1511 229
200 3300038443 Ga0395901_0394362 Ga0395901_0394362_166_933 229
201 3300039450 Ga0436363_1082673 Ga0436363_1082673_772_1539 229
202 3300044684 Ga0466966_0207300 Ga0466966_0207300_384_1151 229
203 3300046453 Ga0495627_002198 Ga0495627_002198_3525_4286 229
204 3300046471 Ga0495650_0004281 Ga0495650_0004281_3509_4270 229
205 3300046472 Ga0495580_0002818 Ga0495580_0002818_881_1648 229
206 3300046472 Ga0495580_0067386 Ga0495580_0067386_622_1389 229
207 3300046472 Ga0495580_0110499 Ga0495580_0110499_128_895 229
208 3300046473 Ga0495582_0162571 Ga0495582_0162571_185_952 229
209 3300046514 Ga0495618_0103721 Ga0495618_0103721_806_1573 229
210 3300046516 Ga0495628_0342692 Ga0495628_0342692_132_899 229
211 3300046536 Ga0495587_0021488 Ga0495587_0021488_1620_2387 229
212 3300046675 Ga0495657_0112045 Ga0495657_0112045_950_1717 229
213 3300046681 Ga0495647_0073977 Ga0495647_0073977_476_1243 229
214 3300047319 Ga0495674_0241728 Ga0495674_0241728_360_1127 229
215 3300047470 Ga0495681_0004202 Ga0495681_0004202_5588_6349 229
216 3300048904 Ga0496101_0028404 Ga0496101_0028404_1584_2351 229
217 3300048905 Ga0496102_0105926 Ga0496102_0105926_1358_2125 229
218 3300048907 Ga0496104_0000048 Ga0496104_0000048_32710_33477 229
219 3300048907 Ga0496104_0559229 Ga0496104_0559229_83_850 229
220 3300048908 Ga0496105_0000010 Ga0496105_0000010_278288_279055 229
221 3300048908 Ga0496105_0028384 Ga0496105_0028384_212_979 229
222 3300048909 Ga0496106_0080827 Ga0496106_0080827_645_1412 229
223 3300048910 Ga0496107_0428408 Ga0496107_0428408_66_827 229
224 3300048911 Ga0496108_0012925 Ga0496108_0012925_5827_6594 229
225 3300048912 Ga0496109_0008037 Ga0496109_0008037_2710_3477 229
226 3300048913 Ga0496110_0090507 Ga0496110_0090507_1249_2016 229
227 3300048915 Ga0496112_0073158 Ga0496112_0073158_1250_2017 229
228 3300048917 Ga0496114_0027405 Ga0496114_0027405_3817_4584 229
229 3300048918 Ga0496115_0017511 Ga0496115_0017511_4076_4843 229
230 3300048918 Ga0496115_0044643 Ga0496115_0044643_2338_3099 229
231 3300048919 Ga0496116_0000413 Ga0496116_0000413_42211_43023 229
232 3300048924 Ga0496121_0000976 Ga0496121_0000976_18119_18907 229
233 3300048924 Ga0496121_0317438 Ga0496121_0317438_216_977 229
234 3300049570 Ga0501033_0039788 Ga0501033_0039788_502_1266 229
235 3300049570 Ga0501033_0101612 Ga0501033_0101612_817_1578 229
236 3300049571 Ga0501034_0092277 Ga0501034_0092277_1570_2331 229
237 3300049573 Ga0501037_0099714 Ga0501037_0099714_1140_1904 229
238 3300049574 Ga0501038_0068499 Ga0501038_0068499_332_1093 229
239 3300049574 Ga0501038_0400897 Ga0501038_0400897_55_819 229
240 3300049575 Ga0501039_0099827 Ga0501039_0099827_690_1451 229
241 3300049577 Ga0501041_0257823 Ga0501041_0257823_245_1006 229
242 3300049579 Ga0501043_0074092 Ga0501043_0074092_31_792 229
243 3300049581 Ga0501047_0037939 Ga0501047_0037939_675_1439 229
244 3300049586 Ga0501070_0311042 Ga0501070_0311042_149_913 229
245 3300049587 Ga0501071_0009923 Ga0501071_0009923_3543_4304 229
246 3300049588 Ga0501072_0194072 Ga0501072_0194072_172_933 229
247 3300049590 Ga0501074_0112630 Ga0501074_0112630_1027_1785 229
248 3300049590 Ga0501074_0192025 Ga0501074_0192025_163_927 229
249 3300049591 Ga0501075_0032332 Ga0501075_0032332_1215_1976 229
250 3300049592 Ga0501076_0017892 Ga0501076_0017892_4562_5323 229
251 3300049593 Ga0501077_0160526 Ga0501077_0160526_519_1280 229
252 3300049742 Ga0501080_0025130 Ga0501080_0025130_2344_3105 229
253 3300049742 Ga0501080_0033986 Ga0501080_0033986_1916_2674 229
254 3300049742 Ga0501080_0454954 Ga0501080_0454954_342_1103 229
255 3300049743 Ga0501081_0128772 Ga0501081_0128772_741_1502 229
256 3300049822 Ga0501035_0277128 Ga0501035_0277128_167_931 229
257 3300049823 Ga0501044_0112925 Ga0501044_0112925_1848_2609 229
258 3300049823 Ga0501044_0142931 Ga0501044_0142931_840_1604 229
259 3300049823 Ga0501044_0629807 Ga0501044_0629807_94_867 229
260 3300050489 nmdc:mga03683_45489_c1 nmdc:mga03683_45489_c1_309_1070 229
261 3300050490 nmdc:mga03n38_51407_c1 nmdc:mga03n38_51407_c1_747_1508 229
262 3300050494 nmdc:mga06z11_152553_c1 nmdc:mga06z11_152553_c1_152_913 229
263 3300050511 nmdc:mga08y16_5483_c1 nmdc:mga08y16_5483_c1_7869_8630 229
264 3300053120 Ga0500597_127071 Ga0500597_127071_145_906 229
265 3300054114 Ga0501084_0066756 Ga0501084_0066756_1132_1893 229
266 3300060353 Ga0501082_0613191 Ga0501082_0613191_176_937 229
267 3300061734 Ga0530510_0099785 Ga0530510_0099785_510_1271 229

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00106

adh_short

short chain dehydrogenase

22

222

0.97

PF13561

adh_short_C2

Enoyl-(Acyl carrier protein) reductase

28

265

0.93

PF08659

KR

KR domain

23

211

0.78

PF03446

NAD_binding_2

NAD binding domain of 6-phosphogluconate dehydrogenase

24

109

0.72

Structural Annotation

Top 5 Hits

ID Description Score Start End
4o5o-assembly1.cif.gz_B-2 x-ray crystal structure of a 3-hydroxyacyl-coa dehydrogenase from brucella suis 0.9454 1 229
4o5o-assembly1.cif.gz_B-2 x-ray crystal structure of a 3-hydroxyacyl-coa dehydrogenase from brucella suis 0.9414 1 229
1u7t-assembly1.cif.gz_B crystal structure of abad/hsd10 with a bound inhibitor 0.9342 3 227
4pn3-assembly1.cif.gz_A crystal structure of 3-hydroxyacyl-coa-dehydrogenase from brucella melitensis 0.9319 1 229
4pn3-assembly1.cif.gz_A crystal structure of 3-hydroxyacyl-coa-dehydrogenase from brucella melitensis 0.928 1 229
ID Description Score Start End Superfamily
af_A0A0R0HUJ2_8_65_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9234 6 50 3.40.50.720
af_A4I111_2_259_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9181 1 229 3.40.50.720
af_Q99714_1_261_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9169 1 227 3.40.50.720
af_A4I111_2_259_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9143 1 229 3.40.50.720
af_Q99714_1_261_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9053 1 227 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A2P9AME5-F1-model_v4 3-hydroxyacyl-CoA dehydrogenase type-2 (EC 1.1.1.178, EC 1.1.1.35) 0.9537 1 115 GO:0003857
GO:0047015
AF-A0A530MMB0-F1-model_v4 deleted 0.9533 1 127
AF-A0A7H1N2E2-F1-model_v4 SDR family NAD(P)-dependent oxidoreductase 0.9506 1 227 GO:0016491
AF-A0A527ZFR6-F1-model_v4 SDR family NAD(P)-dependent oxidoreductase 0.9506 1 152 GO:0016491
AF-A0A7V8BS38-F1-model_v4 deleted 0.9505 1 226

Feature Viewer

pLDDT pTM Quality
86.73 0.86 High
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Predicted Structure (AlphaFold2)

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