F375076

General Info

Members Datasets Scaffolds Average Seq Length
267 186 243 391

Family's Representative Sequence

Representative Sequence 3300049572|Ga0501036_0064897|Ga0501036_0064897_599_1900
Length 433
Sequence LAGSFIKTHIDEIFCQKFNLNFASLASSNVRVDYADGMKNSETGFSTRAIHEGYNALDYHGALNPPVFLTSTYAFERSETGSDRFAGAADGYIYSRVGNPTVTVLEKRMASLEGGEAAMATSSGMGALTAVLWTLLKTGDEVVADKTLYGCTFALLHHQLERFGIKTRFVDLTDPANLSSVLTSRCRMVIAETPSNPNMRLVDIAALADICRSKGALLLIDNTFCTPYLQKPIALGADIVVHSATKYLGGHGDLLAGIAVARKELIDQFRFVGIKEMNGACISAFDAFLVLRGLKTLSLRMDRHGETALRLAHDLAEHPAVDTVYFPGLASHPQYDLARRQMKNMGGMIALELKGGLGAGRAFMDNVGLATRAVSLGDAETLIQHPASMTHATYSPEERAAHGFTDGLIRISVGLEDYDDLRDDLIGSLDRLG

Samples

Sample ID Description Type Environment
1 2585428106 Caulobacter sp. OV484 Isolate Rhizosphere
2 2643221569 Achromobacter sp. Root565 Isolate Unclassified
3 2643221594 Achromobacter sp. Root170 Isolate Unclassified
4 2643221640 Caulobacter sp. Root342 Isolate Unclassified
5 2643221642 Caulobacter sp. Root343 Isolate Unclassified
6 2795385472 Herbihabitans rhizosphaerae DSM 101727 Isolate Rhizosphere
7 2808606395 Achromobacter sp. SLBN-14 Isolate Unclassified
8 2841941048 Bradyrhizobium sp. SBR1B Isolate Nodule
9 2856349417 Mesorhizobium sp. M4A.F.Ca.ET.090.04.2.1 Isolate Nodule
10 2858950400 Achromobacter sp. K91 Isolate Unclassified
11 2860867994 Pseudomonas sp. R1-43-08 Isolate Rhizosphere
12 2881155292 Mesorhizobium sp. M4B.F.Ca.ET.058.02.1.1 Isolate Nodule
13 2881853255 Mesorhizobium sp. M4A.F.Ca.ET.020.02.1.1 Isolate Nodule
14 2884960567 Caulobacter sp. 602-1 Isolate Rhizosphere
15 2885350715 Mesorhizobium sp. M4A.F.Ca.ET.022.05.2.1 Isolate Nodule
16 2919497567 Shewanella putrefaciens 3469 Isolate Unclassified
17 2919543075 Aeromonas salmonicida masoucida 4076 Isolate Unclassified
18 2923525760 Aeromonas caviae SLBN-129 Isolate Rhizosphere
19 2928531327 Caulobacter sp. 1776 Isolate Rhizosphere
20 2929297113 Heliophilum fasciatum MTM Isolate Rhizosphere
21 2941479691
22 2962290636 Bacillus subtilis TLO3 Isolate Rhizosphere
23 2995392953 Martelella limonii NBRC 109441 Isolate Unclassified
24 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
25 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
26 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
27 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
28 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
29 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
30 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
31 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
32 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
33 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
34 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
35 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
36 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
37 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
38 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
39 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
40 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
41 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
42 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
43 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
44 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
45 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
46 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
47 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
48 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
49 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
50 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
51 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
52 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
53 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
55 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
56 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
57 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
58 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
59 3300020075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
60 3300020078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
61 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
62 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
63 3300024225 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 Metagenome Rhizosphere
64 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
66 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
67 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
77 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
78 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
79 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
80 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
81 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
82 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
83 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
84 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
85 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
86 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
87 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
88 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
89 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
90 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
91 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
92 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
93 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
94 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
95 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
96 3300042147 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_080116_2618 Metagenome Rhizosphere
97 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
98 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
99 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
100 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
101 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
102 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
103 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
104 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
105 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
106 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
107 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
108 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
109 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
110 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
111 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
112 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
113 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
114 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
115 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
116 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
117 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
118 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
119 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
120 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
121 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
122 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
123 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
124 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
125 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
126 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
127 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
128 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
129 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
130 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
131 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
132 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
133 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
134 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
135 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
136 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
137 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
138 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
139 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
140 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
141 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
142 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
143 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
144 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
147 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
148 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
149 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
150 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
152 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
153 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
156 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
157 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
158 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
159 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
160 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
161 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
162 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
163 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
164 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
165 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
166 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
167 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
168 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
169 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
170 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
171 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
172 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
173 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
174 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
175 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
176 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
177 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
178 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
179 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
180 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
181 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
182 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
183 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
184 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
185 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
186 8057101203 Sphingomonas lycopersici MMSM20 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 89.89
Metatranscriptomes 1.12
Isolates 8.99

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.49
Nodule 1.87
Rhizoplane 1.12
Rhizosphere 74.91
Stem 0
Stem Tuber 0
Unclassified 14.61

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10002660 3300003320 Bacteria 4911
2 Ga0055536_1001047 3300003781 Bacteria 17477
3 Ga0055536_1001058 3300003781 Bacteria 17347
4 Ga0055530_10004050 3300003791 Bacteria 7867
5 Ga0055530_10004564 3300003791 Bacteria 7070
6 Ga0055531_10001173 3300003794 Bacteria 20160
7 Ga0055531_10001520 3300003794 Bacteria 17000
8 Ga0065714_10066180 3300005288 Bacteria 7422
9 Ga0070658_10009624 3300005327 Bacteria 7759
10 Ga0070683_100000084 3300005329 Bacteria 64212
11 Ga0070683_100049625 3300005329 Bacteria 3883
12 Ga0070670_100000299 3300005331 Bacteria 42889
13 Ga0070670_100038583 3300005331 Bacteria 4107
14 Ga0070692_10001403 3300005345 Bacteria 8721
15 Ga0070667_100118458 3300005367 Bacteria 2301
16 Ga0070708_100012131 3300005445 Bacteria 7025
17 Ga0070707_100015753 3300005468 Bacteria 7097
18 Ga0070707_100025229 3300005468 Bacteria 5638
19 Ga0070707_100116784 3300005468 Bacteria 2590
20 Ga0070698_100003845 3300005471 Bacteria 16511
21 Ga0070698_100008187 3300005471 Bacteria 11306
22 Ga0070699_100177507 3300005518 Unclassified 1889
23 Ga0070684_100003065 3300005535 Bacteria 12475
24 Ga0070695_100022284 3300005545 Bacteria 3885
25 Ga0070696_100033392 3300005546 Bacteria 3535
26 Ga0068857_100046891 3300005577 Bacteria 3835
27 Ga0068854_100033811 3300005578 Bacteria 3566
28 Ga0068859_100092430 3300005617 Bacteria 3077
29 Ga0068860_100159483 3300005843 Bacteria 2174
30 Ga0081540_1026993 3300005983 Bacteria 3264
31 Ga0070715_10045301 3300006163 Bacteria 1864
32 Ga0075428_100130580 3300006844 Bacteria 2733
33 Ga0075433_10213522 3300006852 Bacteria 1714
34 Ga0075429_100254592 3300006880 Bacteria 1537
35 Ga0097620_100092426 3300006931 Bacteria 3077
36 Ga0075435_100137680 3300007076 Bacteria 2046
37 Ga0105245_10000005 3300009098 Bacteria 335871
38 Ga0114129_10001806 3300009147 Bacteria 29163
39 Ga0114129_10011076 3300009147 Bacteria 12847
40 Ga0157369_10000503 3300013105 Bacteria 51496
41 Ga0157378_10000013 3300013297 Bacteria 151930
42 Ga0157378_10000109 3300013297 Bacteria 78488
43 Ga0157375_10000022 3300013308 Bacteria 239765
44 Ga0157375_10000247 3300013308 Bacteria 49223
45 Ga0163163_10139269 3300014325 Bacteria 2468
46 Ga0157376_10000006 3300014969 Bacteria 368549
47 Ga0206349_1926672 3300020075 Bacteria 2922
48 Ga0206352_11235774 3300020078 Bacteria 1394
49 Ga0206350_11484273 3300020080 Bacteria 1509
50 Ga0213876_10000177 3300021384 Bacteria 65884
51 Ga0213876_10028664 3300021384 Bacteria 2935
52 Ga0224572_1004336 3300024225 Unclassified 2459
53 Ga0209676_1000171 3300025292 Bacteria 154045
54 Ga0209676_1000177 3300025292 Bacteria 151589
55 Ga0209050_1000391 3300025298 Bacteria 82421
56 Ga0209050_1000496 3300025298 Bacteria 67112
57 Ga0209050_1008714 3300025298 Bacteria 5347
58 Ga0209051_1005178 3300025303 Bacteria 7721
59 Ga0209257_1000253 3300025304 Bacteria 123508
60 Ga0209257_1010297 3300025304 Bacteria 4762
61 Ga0207646_10017286 3300025922 Bacteria 6753
62 Ga0207646_10077401 3300025922 Bacteria 2973
63 Ga0207650_10000026 3300025925 Bacteria 264152
64 Ga0207687_10000005 3300025927 Bacteria 770649
65 Ga0207689_10268678 3300025942 Bacteria 1412
66 Ga0207661_10000037 3300025944 Bacteria 148458
67 Ga0207661_10028721 3300025944 Bacteria 4263
68 Ga0207640_10070548 3300025981 Bacteria 2350
69 Ga0207641_10177778 3300026088 Unclassified 1947
70 Ga0207674_10009956 3300026116 Bacteria 10817
71 Ga0209998_10000076 3300027717 Bacteria 39447
72 Ga0265324_10005019 3300029957 Bacteria 5816
73 Ga0307511_10002299 3300030521 Bacteria 19969
74 Ga0307511_10017868 3300030521 Bacteria 6792
75 Ga0307509_10088753 3300031507 Bacteria 3173
76 Ga0307516_10001206 3300031730 Bacteria 36079
77 Ga0307516_10005376 3300031730 Bacteria 15391
78 Ga0307516_10119945 3300031730 Bacteria 2422
79 Ga0307510_10018654 3300033180 Bacteria 8157
80 Ga0373934_0000456 3300035086 Bacteria 14296
81 Ga0373932_0000613 3300035112 Bacteria 10812
82 Ga0373953_0001180 3300035117 Bacteria 7429
83 Ga0373954_0049389 3300035118 Bacteria 1972
84 Ga0373956_0003345 3300035119 Bacteria 6453
85 Ga0373957_0000105 3300035120 Bacteria 20463
86 Ga0373955_0000005 3300035172 Bacteria 108267
87 Ga0373924_0000626 3300035410 Bacteria 10953
88 Ga0373931_0078404 3300035691 Bacteria 1817
89 Ga0373933_0000043 3300035724 Bacteria 78147
90 Ga0373937_0000951 3300036401 Bacteria 24624
91 Ga0373925_0066191 3300037068 Bacteria 2723
92 Ga0436365_0670421 3300039437 Bacteria 180224
93 Ga0436365_0779180 3300039437 Bacteria 15737
94 Ga0436362_0230920 3300039453 Bacteria 9115
95 Ga0450910_001839 3300042147 Bacteria 2738
96 Ga0451577_0001057 3300042876 Bacteria 39715
97 Ga0451577_0021819 3300042876 Bacteria 5856
98 Ga0451577_0099243 3300042876 Bacteria 2601
99 Ga0453684_0000142 3300044712 Bacteria 316405
100 Ga0453684_0001424 3300044712 Bacteria 68740
101 Ga0453684_0006594 3300044712 Bacteria 21959
102 Ga0451576_0000119 3300045051 Bacteria 200621
103 Ga0451576_0000526 3300045051 Bacteria 83427
104 Ga0451576_0009133 3300045051 Bacteria 11524
105 Ga0451576_0021819 3300045051 Bacteria 6952
106 Ga0495592_0000092 3300046454 Bacteria 79147
107 Ga0495592_0022975 3300046454 Bacteria 4745
108 Ga0495629_0005558 3300046459 Bacteria 9410
109 Ga0495641_0008262 3300046461 Bacteria 6370
110 Ga0495651_0000066 3300046462 Bacteria 77538
111 Ga0495651_0017556 3300046462 Bacteria 5540
112 Ga0495653_0029482 3300046463 Bacteria 4380
113 Ga0495608_0000070 3300046511 Bacteria 77533
114 Ga0495628_0000829 3300046516 Bacteria 28672
115 Ga0495630_0016195 3300046517 Bacteria 5448
116 Ga0495666_0015901 3300046526 Bacteria 3748
117 Ga0495642_0040150 3300046528 Bacteria 1900
118 Ga0495652_0000232 3300046529 Bacteria 65303
119 Ga0495654_0002868 3300046530 Bacteria 10830
120 Ga0495587_0000077 3300046536 Bacteria 77532
121 Ga0495587_0005141 3300046536 Bacteria 8554
122 Ga0495597_0014630 3300046542 Bacteria 3733
123 Ga0495667_0000071 3300046559 Bacteria 77538
124 Ga0495668_0000026 3300046616 Bacteria 297287
125 Ga0495625_0083898 3300046660 Bacteria 2214
126 Ga0495625_0190647 3300046660 Bacteria 1358
127 Ga0495635_0006002 3300046663 Bacteria 8474
128 Ga0495657_0000095 3300046675 Bacteria 77538
129 Ga0495657_0032539 3300046675 Bacteria 3637
130 Ga0495599_0022020 3300046678 Bacteria 3977
131 Ga0495623_0001233 3300046679 Bacteria 17374
132 Ga0495623_0032598 3300046679 Bacteria 3348
133 Ga0495658_0002191 3300046683 Bacteria 9885
134 Ga0495669_0000078 3300046684 Bacteria 64436
135 Ga0495600_0001235 3300046809 Bacteria 14020
136 Ga0495604_0000087 3300047317 Bacteria 79147
137 Ga0495604_0029491 3300047317 Bacteria 4365
138 Ga0495672_0003015 3300047320 Bacteria 14809
139 Ga0495680_0000225 3300047322 Bacteria 61654
140 Ga0495675_0007314 3300047444 Bacteria 6804
141 Ga0495675_0069569 3300047444 Bacteria 2222
142 Ga0495677_0007739 3300047445 Bacteria 4006
143 Ga0495679_033433 3300047446 Bacteria 1643
144 Ga0495686_0002398 3300047472 Bacteria 17807
145 Ga0495602_0000419 3300048088 Bacteria 39857
146 Ga0495602_0021863 3300048088 Bacteria 6279
147 Ga0496104_0180944 3300048907 Bacteria 2018
148 Ga0496106_0144373 3300048909 Bacteria 1873
149 Ga0496109_0151141 3300048912 Bacteria 2174
150 Ga0496116_0007504 3300048919 Bacteria 9653
151 Ga0496117_0049721 3300048920 Bacteria 2979
152 Ga0496118_0018843 3300048921 Bacteria 6197
153 Ga0496120_0017200 3300048923 Bacteria 4696
154 Ga0496121_0000145 3300048924 Bacteria 156655
155 Ga0496121_0000214 3300048924 Bacteria 127349
156 Ga0496121_0057856 3300048924 Bacteria 3210
157 Ga0496123_0000216 3300048926 Bacteria 117098
158 Ga0496123_0056418 3300048926 Bacteria 2567
159 Ga0496124_0007675 3300048927 Bacteria 11413
160 Ga0496124_0166574 3300048927 Bacteria 1712
161 Ga0496125_0000706 3300048928 Bacteria 55374
162 Ga0496125_0022034 3300048928 Bacteria 5924
163 Ga0496125_0051729 3300048928 Bacteria 3385
164 Ga0496125_0146763 3300048928 Bacteria 1629
165 Ga0496126_0017092 3300048929 Bacteria 7234
166 Ga0496126_0050108 3300048929 Bacteria 3807
167 Ga0501031_0001360 3300049568 Bacteria 15099
168 Ga0501031_0189491 3300049568 Bacteria 1343
169 Ga0501033_0028825 3300049570 Bacteria 4171
170 Ga0501036_0002750 3300049572 Bacteria 13910
171 Ga0501036_0003619 3300049572 Bacteria 12356
172 Ga0501036_0048826 3300049572 Bacteria 3583
173 Ga0501036_0064897 3300049572 Bacteria 3090
174 Ga0501037_0142859 3300049573 Bacteria 1712
175 Ga0501038_0003623 3300049574 Bacteria 14388
176 Ga0501038_0015884 3300049574 Bacteria 6840
177 Ga0501038_0104338 3300049574 Bacteria 2356
178 Ga0501038_0163525 3300049574 Bacteria 1807
179 Ga0501039_0028453 3300049575 Bacteria 4303
180 Ga0501040_0001148 3300049576 Bacteria 16838
181 Ga0501040_0008958 3300049576 Bacteria 6509
182 Ga0501041_0002548 3300049577 Bacteria 10387
183 Ga0501041_0012127 3300049577 Bacteria 5103
184 Ga0501042_0002016 3300049578 Bacteria 12293
185 Ga0501042_0013887 3300049578 Bacteria 5487
186 Ga0501043_0259817 3300049579 Bacteria 1336
187 Ga0501046_0022566 3300049580 Bacteria 5185
188 Ga0501048_0000413 3300049582 Bacteria 29913
189 Ga0501048_0014416 3300049582 Bacteria 5851
190 Ga0501048_0104653 3300049582 Bacteria 1997
191 Ga0501067_0016147 3300049583 Bacteria 4128
192 Ga0501067_0037858 3300049583 Bacteria 2678
193 Ga0501068_0002622 3300049584 Bacteria 9527
194 Ga0501068_0006256 3300049584 Bacteria 6550
195 Ga0501069_0015558 3300049585 Bacteria 4080
196 Ga0501070_0256626 3300049586 Bacteria 1429
197 Ga0501071_0000058 3300049587 Bacteria 37842
198 Ga0501071_0001547 3300049587 Bacteria 13439
199 Ga0501071_0002922 3300049587 Bacteria 10551
200 Ga0501071_0044492 3300049587 Bacteria 3184
201 Ga0501072_0000705 3300049588 Bacteria 24233
202 Ga0501072_0008733 3300049588 Bacteria 7693
203 Ga0501072_0051159 3300049588 Bacteria 3253
204 Ga0501075_0000177 3300049591 Bacteria 33160
205 Ga0501075_0005313 3300049591 Bacteria 8808
206 Ga0501076_0000014 3300049592 Bacteria 97509
207 Ga0501076_0003193 3300049592 Bacteria 11434
208 Ga0501076_0015022 3300049592 Bacteria 5847
209 Ga0501077_0008199 3300049593 Bacteria 6460
210 Ga0501079_0002447 3300049741 Bacteria 13486
211 Ga0501079_0023078 3300049741 Bacteria 4777
212 Ga0501079_0060271 3300049741 Bacteria 2927
213 Ga0501080_0011880 3300049742 Bacteria 7978
214 Ga0501080_0037847 3300049742 Bacteria 4505
215 Ga0501081_0002940 3300049743 Bacteria 10808
216 Ga0501081_0015952 3300049743 Bacteria 4961
217 Ga0501035_0019401 3300049822 Bacteria 6253
218 Ga0501035_0068262 3300049822 Bacteria 3153
219 Ga0501035_0162115 3300049822 Bacteria 1935
220 Ga0501044_0019232 3300049823 Bacteria 7312
221 Ga0501045_0000624 3300049824 Bacteria 22384
222 Ga0501045_0038521 3300049824 Bacteria 3477
223 nmdc:mga0n895_26257_c1 3300050512 Bacteria 5513
224 nmdc:mga0rr50_148391_c1 3300050513 Bacteria 1893
225 nmdc:mga08x19_7483_c1 3300050514 Bacteria 6487
226 nmdc:mga0a205_111826_c1 3300050515 Bacteria 2631
227 Ga0495601_0068119 3300053077 Bacteria 2268
228 Ga0495595_0008070 3300053084 Bacteria 4316
229 Ga0500595_020258 3300053119 Bacteria 2398
230 Ga0500608_000379 3300053122 Bacteria 17182
231 Ga0500559_0005430 3300053136 Bacteria 5864
232 Ga0500568_0006397 3300053139 Bacteria 5913
233 Ga0500622_0002210 3300053156 Bacteria 14359
234 Ga0500637_0040888 3300053178 Bacteria 2620
235 Ga0501084_0002781 3300054114 Bacteria 14130
236 Ga0501084_0012673 3300054114 Bacteria 6986
237 Ga0501084_0223545 3300054114 Bacteria 1589
238 Ga0501082_0007973 3300060353 Bacteria 9143
239 Ga0501082_0165494 3300060353 Bacteria 1922
240 Ga0530510_0000045 3300061734 Bacteria 56772
241 Ga0530510_0012606 3300061734 Bacteria 5942
242 Ga0530510_0018175 3300061734 Bacteria 4985
243 Ga0530510_0047665 3300061734 Bacteria 3096

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049822 Ga0501035_0068262 Ga0501035_0068262_2121_3137 306
2 3300021384 Ga0213876_10028664 Ga0213876_100286643 355
3 3300039437 Ga0436365_0779180 Ga0436365_0779180_14037_15257 355
4 3300046459 Ga0495629_0005558 Ga0495629_0005558_775_1956 358
5 3300046461 Ga0495641_0008262 Ga0495641_0008262_569_1750 358
6 3300046526 Ga0495666_0015901 Ga0495666_0015901_1767_2948 358
7 3300046663 Ga0495635_0006002 Ga0495635_0006002_2696_3877 358
8 3300046683 Ga0495658_0002191 Ga0495658_0002191_8395_9576 358
9 3300053077 Ga0495601_0068119 Ga0495601_0068119_353_1534 358
10 3300035112 Ga0373932_0000613 Ga0373932_0000613_2963_4177 360
11 3300049572 Ga0501036_0048826 Ga0501036_0048826_649_1830 361
12 3300049574 Ga0501038_0163525 Ga0501038_0163525_240_1421 361
13 3300049579 Ga0501043_0259817 Ga0501043_0259817_118_1299 361
14 3300049582 Ga0501048_0104653 Ga0501048_0104653_61_1242 361
15 3300049587 Ga0501071_0000058 Ga0501071_0000058_22796_23977 361
16 3300049588 Ga0501072_0051159 Ga0501072_0051159_191_1372 361
17 3300049592 Ga0501076_0015022 Ga0501076_0015022_1534_2715 361
18 3300049741 Ga0501079_0023078 Ga0501079_0023078_2057_3238 361
19 3300049822 Ga0501035_0162115 Ga0501035_0162115_340_1521 361
20 3300049824 Ga0501045_0038521 Ga0501045_0038521_235_1416 361
21 3300006163 Ga0070715_10045301 Ga0070715_100453011 362
22 3300035691 Ga0373931_0078404 Ga0373931_0078404_388_1569 362
23 3300048907 Ga0496104_0180944 Ga0496104_0180944_15_1196 362
24 3300048912 Ga0496109_0151141 Ga0496109_0151141_445_1626 362
25 3300050512 nmdc:mga0n895_26257_c1 nmdc:mga0n895_26257_c1_510_1691 362
26 3300006844 Ga0075428_100130580 Ga0075428_1001305801 364
27 3300006852 Ga0075433_10213522 Ga0075433_102135221 364
28 3300007076 Ga0075435_100137680 Ga0075435_1001376801 364
29 3300009147 Ga0114129_10001806 Ga0114129_100018062 364
30 3300035086 Ga0373934_0000456 Ga0373934_0000456_8391_9566 364
31 3300035117 Ga0373953_0001180 Ga0373953_0001180_1802_2977 364
32 3300035118 Ga0373954_0049389 Ga0373954_0049389_464_1639 364
33 3300035119 Ga0373956_0003345 Ga0373956_0003345_361_1536 364
34 3300035120 Ga0373957_0000105 Ga0373957_0000105_19003_20178 364
35 3300035172 Ga0373955_0000005 Ga0373955_0000005_2571_3746 364
36 3300035410 Ga0373924_0000626 Ga0373924_0000626_3936_5111 364
37 3300035724 Ga0373933_0000043 Ga0373933_0000043_76610_77785 364
38 3300036401 Ga0373937_0000951 Ga0373937_0000951_363_1538 364
39 3300046454 Ga0495592_0000092 Ga0495592_0000092_1972_3147 364
40 3300046462 Ga0495651_0000066 Ga0495651_0000066_363_1538 364
41 3300046463 Ga0495653_0029482 Ga0495653_0029482_313_1488 364
42 3300046511 Ga0495608_0000070 Ga0495608_0000070_76017_77192 364
43 3300046516 Ga0495628_0000829 Ga0495628_0000829_26553_27728 364
44 3300046529 Ga0495652_0000232 Ga0495652_0000232_39231_40406 364
45 3300046536 Ga0495587_0000077 Ga0495587_0000077_363_1538 364
46 3300046559 Ga0495667_0000071 Ga0495667_0000071_363_1538 364
47 3300046675 Ga0495657_0000095 Ga0495657_0000095_363_1538 364
48 3300046678 Ga0495599_0022020 Ga0495599_0022020_1471_2646 364
49 3300046679 Ga0495623_0001233 Ga0495623_0001233_12900_14075 364
50 3300046809 Ga0495600_0001235 Ga0495600_0001235_185_1360 364
51 3300047317 Ga0495604_0000087 Ga0495604_0000087_1972_3147 364
52 3300047322 Ga0495680_0000225 Ga0495680_0000225_60118_61293 364
53 3300047444 Ga0495675_0069569 Ga0495675_0069569_363_1538 364
54 3300048088 Ga0495602_0000419 Ga0495602_0000419_363_1538 364
55 3300050513 nmdc:mga0rr50_148391_c1 nmdc:mga0rr50_148391_c1_217_1398 364
56 3300050514 nmdc:mga08x19_7483_c1 nmdc:mga08x19_7483_c1_555_1736 364
57 3300050515 nmdc:mga0a205_111826_c1 nmdc:mga0a205_111826_c1_474_1655 364
58 3300053084 Ga0495595_0008070 Ga0495595_0008070_1471_2646 364
59 3300049570 Ga0501033_0028825 Ga0501033_0028825_1005_2216 366
60 3300049572 Ga0501036_0003619 Ga0501036_0003619_8740_9951 366
61 3300049574 Ga0501038_0015884 Ga0501038_0015884_2010_3221 366
62 3300049575 Ga0501039_0028453 Ga0501039_0028453_888_2099 366
63 3300049576 Ga0501040_0008958 Ga0501040_0008958_3602_4813 366
64 3300049577 Ga0501041_0012127 Ga0501041_0012127_2334_3545 366
65 3300049578 Ga0501042_0013887 Ga0501042_0013887_2750_3961 366
66 3300049582 Ga0501048_0014416 Ga0501048_0014416_2913_4124 366
67 3300049587 Ga0501071_0002922 Ga0501071_0002922_6747_7958 366
68 3300049588 Ga0501072_0008733 Ga0501072_0008733_2881_4092 366
69 3300049591 Ga0501075_0000177 Ga0501075_0000177_28361_29572 366
70 3300049592 Ga0501076_0000014 Ga0501076_0000014_73941_75152 366
71 3300049741 Ga0501079_0060271 Ga0501079_0060271_916_2127 366
72 3300049742 Ga0501080_0037847 Ga0501080_0037847_1544_2755 366
73 3300049743 Ga0501081_0015952 Ga0501081_0015952_1569_2780 366
74 3300054114 Ga0501084_0012673 Ga0501084_0012673_2184_3395 366
75 3300061734 Ga0530510_0000045 Ga0530510_0000045_3602_4813 366
76 3300045051 Ga0451576_0021819 Ga0451576_0021819_4587_5783 370
77 iso_pu_bacteria 2929297113 2929297167 371
78 3300047446 Ga0495679_033433 Ga0495679_033433_32_1240 373
79 iso_pu_bacteria 2962290636 2962291043 374
80 3300024225 Ga0224572_1004336 Ga0224572_10043362 375
81 3300047472 Ga0495686_0002398 Ga0495686_0002398_3997_5136 375
82 3300005327 Ga0070658_10009624 Ga0070658_100096248 378
83 3300013308 Ga0157375_10000022 Ga0157375_10000022188 378
84 3300005577 Ga0068857_100046891 Ga0068857_1000468912 381
85 3300026116 Ga0207674_10009956 Ga0207674_100099563 381
86 iso_pu_bacteria 2919497567 2919499603 381
87 iso_pu_bacteria 2919543075 2919543557 381
88 iso_pu_bacteria 2923525760 2923528769 381
89 3300005345 Ga0070692_10001403 Ga0070692_100014035 383
90 3300042876 Ga0451577_0099243 Ga0451577_0099243_956_2164 383
91 3300045051 Ga0451576_0009133 Ga0451576_0009133_324_1535 383
92 iso_pu_bacteria 2795385472 2795796115 384
93 3300005288 Ga0065714_10066180 Ga0065714_100661808 385
94 3300037068 Ga0373925_0066191 Ga0373925_0066191_234_1415 385
95 3300046454 Ga0495592_0022975 Ga0495592_0022975_2452_3633 385
96 3300046462 Ga0495651_0017556 Ga0495651_0017556_2472_3653 385
97 3300046517 Ga0495630_0016195 Ga0495630_0016195_3990_5171 385
98 3300046536 Ga0495587_0005141 Ga0495587_0005141_3929_5110 385
99 3300046675 Ga0495657_0032539 Ga0495657_0032539_34_1215 385
100 3300046679 Ga0495623_0032598 Ga0495623_0032598_835_2016 385
101 3300047317 Ga0495604_0029491 Ga0495604_0029491_2499_3680 385
102 3300047444 Ga0495675_0007314 Ga0495675_0007314_1812_2993 385
103 3300048088 Ga0495602_0021863 Ga0495602_0021863_268_1449 385
104 iso_pu_bacteria 2860867994 2860870954 385
105 3300005329 Ga0070683_100049625 Ga0070683_1000496252 386
106 3300025944 Ga0207661_10028721 Ga0207661_100287212 386
107 3300047320 Ga0495672_0003015 Ga0495672_0003015_2662_3837 386
108 iso_pu_bacteria 2585428106 2587918340 386
109 iso_pu_bacteria 2643221569 2643860577 386
110 iso_pu_bacteria 2643221594 2643981566 386
111 iso_pu_bacteria 2643221640 2644227767 386
112 iso_pu_bacteria 2643221642 2644233972 386
113 iso_pu_bacteria 2808606395 2809035473 386
114 iso_pu_bacteria 2856349417 2856356013 386
115 iso_pu_bacteria 2858950400 2858953291 386
116 iso_pu_bacteria 2881155292 2881156629 386
117 iso_pu_bacteria 2881853255 2881856439 386
118 iso_pu_bacteria 2884960567 2884962282 386
119 iso_pu_bacteria 2885350715 2885353348 386
120 iso_pu_bacteria 2928531327 2928533088 386
121 iso_pu_bacteria 2941479691 2941483686 386
122 iso_pu_bacteria 8057101203 8057105680 386
123 3300021384 Ga0213876_10000177 Ga0213876_1000017719 387
124 3300039437 Ga0436365_0670421 Ga0436365_0670421_137973_139181 387
125 3300039453 Ga0436362_0230920 Ga0436362_0230920_3713_4921 387
126 3300003781 Ga0055536_1001047 Ga0055536_10010477 388
127 3300003781 Ga0055536_1001058 Ga0055536_10010587 388
128 3300003791 Ga0055530_10004050 Ga0055530_100040505 388
129 3300003791 Ga0055530_10004564 Ga0055530_100045642 388
130 3300003794 Ga0055531_10001173 Ga0055531_1000117312 388
131 3300003794 Ga0055531_10001520 Ga0055531_1000152012 388
132 3300005329 Ga0070683_100000084 Ga0070683_10000008439 388
133 3300005331 Ga0070670_100000299 Ga0070670_1000002996 388
134 3300005331 Ga0070670_100038583 Ga0070670_1000385832 388
135 3300005367 Ga0070667_100118458 Ga0070667_1001184583 388
136 3300005471 Ga0070698_100008187 Ga0070698_1000081873 388
137 3300005518 Ga0070699_100177507 Ga0070699_1001775071 388
138 3300005535 Ga0070684_100003065 Ga0070684_10000306510 388
139 3300005578 Ga0068854_100033811 Ga0068854_1000338113 388
140 3300005617 Ga0068859_100092430 Ga0068859_1000924302 388
141 3300005843 Ga0068860_100159483 Ga0068860_1001594832 388
142 3300005983 Ga0081540_1026993 Ga0081540_10269933 388
143 3300006931 Ga0097620_100092426 Ga0097620_1000924263 388
144 3300009098 Ga0105245_10000005 Ga0105245_1000000516 388
145 3300013105 Ga0157369_10000503 Ga0157369_1000050328 388
146 3300013297 Ga0157378_10000013 Ga0157378_1000001368 388
147 3300013297 Ga0157378_10000109 Ga0157378_1000010937 388
148 3300013308 Ga0157375_10000247 Ga0157375_1000024714 388
149 3300014325 Ga0163163_10139269 Ga0163163_101392692 388
150 3300014969 Ga0157376_10000006 Ga0157376_10000006215 388
151 3300025292 Ga0209676_1000171 Ga0209676_100017147 388
152 3300025292 Ga0209676_1000177 Ga0209676_100017775 388
153 3300025298 Ga0209050_1000391 Ga0209050_100039151 388
154 3300025298 Ga0209050_1000496 Ga0209050_100049626 388
155 3300025298 Ga0209050_1008714 Ga0209050_10087142 388
156 3300025303 Ga0209051_1005178 Ga0209051_10051785 388
157 3300025304 Ga0209257_1000253 Ga0209257_100025386 388
158 3300025304 Ga0209257_1010297 Ga0209257_10102974 388
159 3300025925 Ga0207650_10000026 Ga0207650_1000002641 388
160 3300025927 Ga0207687_10000005 Ga0207687_10000005382 388
161 3300025942 Ga0207689_10268678 Ga0207689_102686781 388
162 3300025944 Ga0207661_10000037 Ga0207661_1000003739 388
163 3300025981 Ga0207640_10070548 Ga0207640_100705482 388
164 3300026088 Ga0207641_10177778 Ga0207641_101777782 388
165 3300029957 Ga0265324_10005019 Ga0265324_100050194 388
166 3300030521 Ga0307511_10002299 Ga0307511_100022992 388
167 3300030521 Ga0307511_10017868 Ga0307511_100178683 388
168 3300031507 Ga0307509_10088753 Ga0307509_100887532 388
169 3300031730 Ga0307516_10001206 Ga0307516_1000120615 388
170 3300031730 Ga0307516_10005376 Ga0307516_1000537610 388
171 3300031730 Ga0307516_10119945 Ga0307516_101199451 388
172 3300033180 Ga0307510_10018654 Ga0307510_100186544 388
173 3300042876 Ga0451577_0001057 Ga0451577_0001057_33229_34437 388
174 3300042876 Ga0451577_0021819 Ga0451577_0021819_2944_4176 388
175 3300044712 Ga0453684_0000142 Ga0453684_0000142_176380_177576 388
176 3300044712 Ga0453684_0001424 Ga0453684_0001424_10592_11788 388
177 3300044712 Ga0453684_0006594 Ga0453684_0006594_14142_15350 388
178 3300045051 Ga0451576_0000119 Ga0451576_0000119_111853_113049 388
179 3300045051 Ga0451576_0000526 Ga0451576_0000526_8132_9328 388
180 3300046528 Ga0495642_0040150 Ga0495642_0040150_319_1560 388
181 3300046530 Ga0495654_0002868 Ga0495654_0002868_7555_8745 388
182 3300046542 Ga0495597_0014630 Ga0495597_0014630_839_2044 388
183 3300046616 Ga0495668_0000026 Ga0495668_0000026_47925_49145 388
184 3300046660 Ga0495625_0083898 Ga0495625_0083898_570_1811 388
185 3300046660 Ga0495625_0190647 Ga0495625_0190647_99_1298 388
186 3300046684 Ga0495669_0000078 Ga0495669_0000078_28748_29989 388
187 3300047445 Ga0495677_0007739 Ga0495677_0007739_1208_2443 388
188 3300048909 Ga0496106_0144373 Ga0496106_0144373_498_1718 388
189 3300048919 Ga0496116_0007504 Ga0496116_0007504_836_2026 388
190 3300048920 Ga0496117_0049721 Ga0496117_0049721_1657_2847 388
191 3300048921 Ga0496118_0018843 Ga0496118_0018843_2268_3458 388
192 3300048923 Ga0496120_0017200 Ga0496120_0017200_123_1313 388
193 3300048924 Ga0496121_0000145 Ga0496121_0000145_98945_100135 388
194 3300048924 Ga0496121_0000214 Ga0496121_0000214_100462_101661 388
195 3300048924 Ga0496121_0057856 Ga0496121_0057856_653_1843 388
196 3300048926 Ga0496123_0000216 Ga0496123_0000216_16752_17975 388
197 3300048926 Ga0496123_0056418 Ga0496123_0056418_454_1644 388
198 3300048927 Ga0496124_0007675 Ga0496124_0007675_5834_7039 388
199 3300048927 Ga0496124_0166574 Ga0496124_0166574_497_1687 388
200 3300048928 Ga0496125_0000706 Ga0496125_0000706_35181_36371 388
201 3300048928 Ga0496125_0022034 Ga0496125_0022034_4453_5658 388
202 3300048928 Ga0496125_0051729 Ga0496125_0051729_134_1324 388
203 3300048928 Ga0496125_0146763 Ga0496125_0146763_67_1257 388
204 3300048929 Ga0496126_0017092 Ga0496126_0017092_2169_3368 388
205 3300048929 Ga0496126_0050108 Ga0496126_0050108_1697_2902 388
206 3300049572 Ga0501036_0064897 Ga0501036_0064897_599_1900 388
207 3300049574 Ga0501038_0104338 Ga0501038_0104338_562_1776 388
208 3300049823 Ga0501044_0019232 Ga0501044_0019232_3407_4708 388
209 3300053119 Ga0500595_020258 Ga0500595_020258_397_1596 388
210 3300053122 Ga0500608_000379 Ga0500608_000379_6187_7467 388
211 3300053136 Ga0500559_0005430 Ga0500559_0005430_3710_4990 388
212 3300053139 Ga0500568_0006397 Ga0500568_0006397_898_2097 388
213 3300053156 Ga0500622_0002210 Ga0500622_0002210_11315_12520 388
214 3300053178 Ga0500637_0040888 Ga0500637_0040888_550_1740 388
215 iso_pu_bacteria 2841941048 2841946832 388
216 iso_pu_bacteria 2995392953 2995394583 388
217 3300005445 Ga0070708_100012131 Ga0070708_1000121312 390
218 3300005468 Ga0070707_100015753 Ga0070707_1000157533 390
219 3300020075 Ga0206349_1926672 Ga0206349_19266722 390
220 3300020078 Ga0206352_11235774 Ga0206352_112357741 390
221 3300020080 Ga0206350_11484273 Ga0206350_114842731 390
222 3300025922 Ga0207646_10017286 Ga0207646_100172862 390
223 3300003320 rootH2_10002660 rootH2_100026604 391
224 3300005468 Ga0070707_100025229 Ga0070707_1000252294 391
225 3300005468 Ga0070707_100116784 Ga0070707_1001167842 391
226 3300005471 Ga0070698_100003845 Ga0070698_10000384511 391
227 3300005545 Ga0070695_100022284 Ga0070695_1000222843 391
228 3300005546 Ga0070696_100033392 Ga0070696_1000333922 391
229 3300006880 Ga0075429_100254592 Ga0075429_1002545922 391
230 3300009147 Ga0114129_10011076 Ga0114129_100110765 391
231 3300025922 Ga0207646_10077401 Ga0207646_100774012 391
232 3300027717 Ga0209998_10000076 Ga0209998_1000007613 391
233 3300042147 Ga0450910_001839 Ga0450910_001839_145_1329 391
234 3300049568 Ga0501031_0001360 Ga0501031_0001360_1744_2919 391
235 3300049568 Ga0501031_0189491 Ga0501031_0189491_116_1291 391
236 3300049572 Ga0501036_0002750 Ga0501036_0002750_6297_7472 391
237 3300049573 Ga0501037_0142859 Ga0501037_0142859_343_1518 391
238 3300049574 Ga0501038_0003623 Ga0501038_0003623_11824_12999 391
239 3300049576 Ga0501040_0001148 Ga0501040_0001148_9273_10448 391
240 3300049577 Ga0501041_0002548 Ga0501041_0002548_2053_3228 391
241 3300049578 Ga0501042_0002016 Ga0501042_0002016_6591_7766 391
242 3300049580 Ga0501046_0022566 Ga0501046_0022566_3350_4525 391
243 3300049582 Ga0501048_0000413 Ga0501048_0000413_22022_23197 391
244 3300049583 Ga0501067_0016147 Ga0501067_0016147_1212_2396 391
245 3300049583 Ga0501067_0037858 Ga0501067_0037858_491_1666 391
246 3300049584 Ga0501068_0002622 Ga0501068_0002622_1991_3166 391
247 3300049584 Ga0501068_0006256 Ga0501068_0006256_3283_4464 391
248 3300049585 Ga0501069_0015558 Ga0501069_0015558_1278_2462 391
249 3300049586 Ga0501070_0256626 Ga0501070_0256626_204_1379 391
250 3300049587 Ga0501071_0001547 Ga0501071_0001547_11613_12788 391
251 3300049587 Ga0501071_0044492 Ga0501071_0044492_1999_3174 391
252 3300049588 Ga0501072_0000705 Ga0501072_0000705_320_1495 391
253 3300049591 Ga0501075_0005313 Ga0501075_0005313_1736_2911 391
254 3300049592 Ga0501076_0003193 Ga0501076_0003193_1645_2820 391
255 3300049593 Ga0501077_0008199 Ga0501077_0008199_3285_4460 391
256 3300049741 Ga0501079_0002447 Ga0501079_0002447_320_1495 391
257 3300049742 Ga0501080_0011880 Ga0501080_0011880_705_1880 391
258 3300049743 Ga0501081_0002940 Ga0501081_0002940_9473_10648 391
259 3300049822 Ga0501035_0019401 Ga0501035_0019401_164_1339 391
260 3300049824 Ga0501045_0000624 Ga0501045_0000624_9292_10467 391
261 3300054114 Ga0501084_0002781 Ga0501084_0002781_12690_13865 391
262 3300054114 Ga0501084_0223545 Ga0501084_0223545_212_1387 391
263 3300060353 Ga0501082_0007973 Ga0501082_0007973_1444_2619 391
264 3300060353 Ga0501082_0165494 Ga0501082_0165494_574_1749 391
265 3300061734 Ga0530510_0012606 Ga0530510_0012606_3539_4714 391
266 3300061734 Ga0530510_0018175 Ga0530510_0018175_2261_3445 391
267 3300061734 Ga0530510_0047665 Ga0530510_0047665_828_2003 391

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01053

Cys_Met_Meta_PP

Cys/Met metabolism PLP-dependent enzyme

46

430

0.97

PF00266

Aminotran_5

Aminotransferase class-V

116

281

0.87

PF00155

Aminotran_1_2

Aminotransferase class I and II

74

291

0.84

PF01041

DegT_DnrJ_EryC1

DegT/DnrJ/EryC1/StrS aminotransferase family

81

338

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
3qi6-assembly1.cif.gz_C crystal structure of cystathionine gamma-synthase metb (cgs) from mycobacterium ulcerans agy99 0.9681 2 389
8bis-assembly1.cif.gz_A-2 crystal structure of cystathionine gamma-lyase from toxoplasma gondii in complex with dl-propargylglycine 0.9629 1 390
3qi6-assembly1.cif.gz_C crystal structure of cystathionine gamma-synthase metb (cgs) from mycobacterium ulcerans agy99 0.9629 2 389
8biu-assembly1.cif.gz_G-2 cystathionine gamma-lyase in complex with cystathionine 0.9616 1 390
4l0o-assembly3.cif.gz_G-3 structure determination of cystathionine gamma-synthase from helicobacter pylori 0.9605 3 390
ID Description Score Start End Superfamily
af_A0A0P0VYR6_1_109_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9801 148 254 3.40.640.10
af_Q4DUG8_270_407_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9676 256 391 3.90.1150.10
af_Q2G120_12_246_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9659 24 254 3.40.640.10
4oc9P02 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9646 254 391 3.90.1150.10
1pffB01 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.962 65 254 3.40.640.10
ID Description Score Start End GO Terms
AF-A0A544VQ81-F1-model_v4 Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.9907 66 202 GO:0003962
GO:0004123
GO:0005737
GO:0008483
GO:0009086
GO:0019343
GO:0019346
GO:0030170
AF-A0A7S2W7Z0-F1-model_v4 Cystathionine gamma-lyase 0.9826 122 220 GO:0005737
GO:0016846
GO:0019346
GO:0030170
AF-A0A833KQ90-F1-model_v4 deleted 0.9815 69 251
AF-A0A529ZDV4-F1-model_v4 Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.9809 96 203 GO:0003962
GO:0004123
GO:0005737
GO:0008483
GO:0019343
GO:0019346
GO:0030170
AF-A0A6B0CL06-F1-model_v4 cysteine-S-conjugate beta-lyase (EC 4.4.1.13) 0.9786 22 222 GO:0005737
GO:0008483
GO:0008652
GO:0016846
GO:0019346
GO:0030170

Feature Viewer

pLDDT pTM Quality
95.61 0.93 High
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Predicted Structure (AlphaFold2)

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