F375442
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 268 | 147 | 536 | 283 |
Family's Representative Sequence
| Representative Sequence | 3300009093|Ga0105240_10000175|Ga0105240_10000175102 |
| Length | 300 |
| Sequence | MVTSTASHPAHSEYHDELILVIGGHGKTGRRVVERLQKAGRNVRIGSRRTELPFDWNQPETWAPALRGVTAAYVSYQPDLAVPGALATVRDFVAQALRQGTRRLVLLSGRGEEEAQAAEQALQATDADWTILRASWFAQNFSENFFLDSILAGEVALPVDSVAEPFVDADDIADIAAAALTDSRGTHSRQLYELTGPHALTFPEAINEIARATGREIRFIPVPTADYGAEMERQGIPREYIDLVLYLFTTVLDGRNTPLADGVRQALGREPRSFGDYVRATAATGVWNGVRQGEALAAAE |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 2 | 3300003215 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF | Metagenome | Endosphere |
| 3 | 3300003320 | Sugarcane root Sample H2 | Metagenome | Unclassified |
| 4 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 5 | 3300003791 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 | Metagenome | Endosphere |
| 6 | 3300003794 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 | Metagenome | Endosphere |
| 7 | 3300005262 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) | Metagenome | Endosphere |
| 8 | 3300005272 | Switchgrass rhizosphere microbial communities from Buena Vista Grasslands Wildlife Area, Michigan, USA - BV2.1 v1 | Metagenome | Rhizosphere |
| 9 | 3300005288 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) | Metagenome | Rhizosphere |
| 10 | 3300005335 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 12 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 13 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 14 | 3300005981 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 | Metagenome | Rhizosphere |
| 15 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 16 | 3300006048 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 | Metagenome | Endosphere |
| 17 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 18 | 3300006058 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 | Metagenome | Rhizosphere |
| 19 | 3300006177 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 | Metagenome | Endosphere |
| 20 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 21 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 22 | 3300006846 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Metagenome | Rhizosphere |
| 23 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 24 | 3300006946 | Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG | Metagenome | Nodule |
| 25 | 3300009011 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG | Metagenome | Rhizosphere |
| 26 | 3300009036 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG | Metagenome | Rhizosphere |
| 27 | 3300009092 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG | Metagenome | Rhizosphere |
| 28 | 3300009101 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG | Metagenome | Rhizosphere |
| 29 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 30 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 31 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 32 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 33 | 3300014497 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG | Metagenome | Rhizosphere |
| 34 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 35 | 3300015265 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG | Metagenome | Rhizosphere |
| 36 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 37 | 3300025297 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) | Metagenome | Endosphere |
| 38 | 3300025298 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 39 | 3300025304 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 40 | 3300025711 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 41 | 3300025735 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300025900 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300025903 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300027111 | Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) | Metagenome | Nodule |
| 48 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 49 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 50 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 51 | 3300033180 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM | Metagenome | Unclassified |
| 52 | 3300038705 | Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 | Metagenome | Unclassified |
| 53 | 3300038741 | Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 | Metagenome | Unclassified |
| 54 | 3300038742 | Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 | Metagenome | Unclassified |
| 55 | 3300039110 | Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 | Metagenome | Unclassified |
| 56 | 3300042009 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z071817_5348 | Metagenome | Rhizosphere |
| 57 | 3300042137 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913F_E14_072516_1519 | Metagenome | Rhizosphere |
| 58 | 3300046452 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere | Metagenome | Rhizosphere |
| 59 | 3300046453 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere | Metagenome | Rhizosphere |
| 60 | 3300046457 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere | Metagenome | Rhizosphere |
| 61 | 3300046458 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere | Metagenome | Rhizosphere |
| 62 | 3300046460 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere | Metagenome | Rhizosphere |
| 63 | 3300046471 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere | Metagenome | Rhizosphere |
| 64 | 3300046474 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere | Metagenome | Rhizosphere |
| 65 | 3300046491 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere | Metagenome | Rhizosphere |
| 66 | 3300046492 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere | Metagenome | Rhizosphere |
| 67 | 3300046501 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere | Metagenome | Rhizosphere |
| 68 | 3300046506 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere | Metagenome | Rhizosphere |
| 69 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 70 | 3300046512 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere | Metagenome | Rhizosphere |
| 71 | 3300046513 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere | Metagenome | Rhizosphere |
| 72 | 3300046515 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere | Metagenome | Rhizosphere |
| 73 | 3300046518 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere | Metagenome | Rhizosphere |
| 74 | 3300046519 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere | Metagenome | Rhizosphere |
| 75 | 3300046520 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere | Metagenome | Rhizosphere |
| 76 | 3300046522 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere | Metagenome | Rhizosphere |
| 77 | 3300046523 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere | Metagenome | Rhizosphere |
| 78 | 3300046524 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere | Metagenome | Rhizosphere |
| 79 | 3300046528 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere | Metagenome | Rhizosphere |
| 80 | 3300046530 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere | Metagenome | Rhizosphere |
| 81 | 3300046538 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere | Metagenome | Rhizosphere |
| 82 | 3300046542 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere | Metagenome | Rhizosphere |
| 83 | 3300046557 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere | Metagenome | Rhizosphere |
| 84 | 3300046558 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere | Metagenome | Rhizosphere |
| 85 | 3300046615 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere | Metagenome | Rhizosphere |
| 86 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 87 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 88 | 3300046664 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere | Metagenome | Rhizosphere |
| 89 | 3300046665 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere | Metagenome | Rhizosphere |
| 90 | 3300046674 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere | Metagenome | Rhizosphere |
| 91 | 3300046684 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere | Metagenome | Rhizosphere |
| 92 | 3300046689 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere | Metagenome | Rhizosphere |
| 93 | 3300046691 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere | Metagenome | Rhizosphere |
| 94 | 3300046692 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere | Metagenome | Rhizosphere |
| 95 | 3300046694 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere | Metagenome | Rhizosphere |
| 96 | 3300046794 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300046810 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300047320 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300047323 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300047443 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300047445 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300047446 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300047447 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300047469 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300047470 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300048091 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 109 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 110 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 111 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 112 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 113 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 114 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 115 | 3300049459 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300049460 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere | Metagenome | Rhizosphere |
| 117 | 3300050490 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation | Metagenome | Endosphere |
| 118 | 3300050491 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation | Metagenome | Endosphere |
| 119 | 3300050493 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation | Metagenome | Endosphere |
| 120 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 121 | 3300050509 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation | Metagenome | Rhizosphere |
| 122 | 3300053092 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere | Metagenome | Endosphere |
| 123 | 3300053093 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere | Metagenome | Endosphere |
| 124 | 3300053156 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere | Metagenome | Endosphere |
| 125 | 3300053730 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere | Metagenome | Endosphere |
| 126 | 2506520007 | Serratia plymuthica AS9 | Isolate | Rhizosphere |
| 127 | 2506520008 | Serratia plymuthica AS12 | Isolate | Unclassified |
| 128 | 2508501071 | Serratia proteamaculans S4 | Isolate | Rhizosphere |
| 129 | 2510917020 | Caulobacter sp. AP07 | Isolate | Rhizosphere |
| 130 | 2511231004 | Pseudomonas sp. GM102 | Isolate | Nodule |
| 131 | 2511231008 | Pseudomonas sp. GM21 | Isolate | Nodule |
| 132 | 2511231014 | Pseudomonas sp. GM48 | Isolate | Nodule |
| 133 | 2511231015 | Pseudomonas sp. GM49 | Isolate | Nodule |
| 134 | 2511231017 | Pseudomonas sp. GM55 | Isolate | Nodule |
| 135 | 2511231020 | Pseudomonas sp. GM74 | Isolate | Nodule |
| 136 | 2511231021 | Pseudomonas sp. GM78 | Isolate | Nodule |
| 137 | 2654587920 | Serratia plymuthica HRO-C48 | Isolate | Rhizosphere |
| 138 | 2687453601 | Serratia plymuthica 3Rp8 | Isolate | Unclassified |
| 139 | 2738543004 | Pseudomonas sp. GV085 | Isolate | Unclassified |
| 140 | 2806310673 | Serratia quinivorans NCTC 13189 | Isolate | Rhizosphere |
| 141 | 2862178590 | Streptomyces sp. SDr-06 | Isolate | Rhizosphere |
| 142 | 2869551831 | Serratia inhibens PRI-2C | Isolate | Rhizosphere |
| 143 | 2889790730 | Chelativorans xinjiangense lm93 | Isolate | Rhizosphere |
| 144 | 2889914905 | Chelativorans alearense UJN715 | Isolate | Rhizosphere |
| 145 | 2996310559 | Mesorhizobium zhangyense CGMCC 1.15528 | Isolate | Unclassified |
| 146 | 3007619802 | Pseudomonas sp. PB120 | Isolate | Unclassified |
| 147 | 640753048 | Serratia proteamaculans 568 | Isolate | Endosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 91.42 |
| Metatranscriptomes | 0 |
| Isolates | 8.58 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 8.58 |
| Nodule | 3.36 |
| Rhizoplane | 0.75 |
| Rhizosphere | 80.22 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0.37 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0105240_10000175 | 3300009093 | Bacteria | 130192 |
| 2 | JGI25153J46596_10003292 | 3300003215 | Bacteria | 9075 |
| 3 | JGI25153J46596_10039991 | 3300003215 | Bacteria | 1459 |
| 4 | rootH2_10125906 | 3300003320 | Bacteria | 2032 |
| 5 | rootH1_10313397 | 3300003323 | Bacteria | 2675 |
| 6 | Ga0055530_10000895 | 3300003791 | Bacteria | 24527 |
| 7 | Ga0055531_10001114 | 3300003794 | Bacteria | 20874 |
| 8 | Ga0065165_1000583 | 3300005262 | Bacteria | 53842 |
| 9 | Ga0065703_1018887 | 3300005272 | Bacteria | 5495 |
| 10 | Ga0065714_10012654 | 3300005288 | Bacteria | 2198 |
| 11 | Ga0070666_10152150 | 3300005335 | Bacteria | 1614 |
| 12 | Ga0068857_100283912 | 3300005577 | Bacteria | 1523 |
| 13 | Ga0068859_100682540 | 3300005617 | Bacteria | 1118 |
| 14 | Ga0068863_100045941 | 3300005841 | Bacteria | 4145 |
| 15 | Ga0081538_10021196 | 3300005981 | Bacteria | 4754 |
| 16 | Ga0081539_10013422 | 3300005985 | Bacteria | 6173 |
| 17 | Ga0075363_100058684 | 3300006048 | Bacteria | 2067 |
| 18 | Ga0075364_10037135 | 3300006051 | Bacteria | 3152 |
| 19 | Ga0075432_10024117 | 3300006058 | Bacteria | 2084 |
| 20 | Ga0075432_10051198 | 3300006058 | Bacteria | 1457 |
| 21 | Ga0075362_10054545 | 3300006177 | Bacteria | 1796 |
| 22 | Ga0068871_100013383 | 3300006358 | Bacteria | 6088 |
| 23 | Ga0075428_100091608 | 3300006844 | Bacteria | 3315 |
| 24 | Ga0075430_100089339 | 3300006846 | Bacteria | 2578 |
| 25 | Ga0097620_100682494 | 3300006931 | Bacteria | 1118 |
| 26 | Ga0079104_1006406 | 3300006946 | Bacteria | 4461 |
| 27 | Ga0105251_10001632 | 3300009011 | Bacteria | 19000 |
| 28 | Ga0105244_10127508 | 3300009036 | Bacteria | 1229 |
| 29 | Ga0105250_10000705 | 3300009092 | Bacteria | 20587 |
| 30 | Ga0105240_10001812 | 3300009093 | Bacteria | 35949 |
| 31 | Ga0105247_10000025 | 3300009101 | Bacteria | 208459 |
| 32 | Ga0105237_10092460 | 3300009545 | Bacteria | 3014 |
| 33 | Ga0105238_10001930 | 3300009551 | Bacteria | 20828 |
| 34 | Ga0157370_10007403 | 3300013104 | Bacteria | 11954 |
| 35 | Ga0157375_10236581 | 3300013308 | Bacteria | 1986 |
| 36 | Ga0157375_10395573 | 3300013308 | Bacteria | 1549 |
| 37 | Ga0182008_10005902 | 3300014497 | Bacteria | 6919 |
| 38 | Ga0182008_10243816 | 3300014497 | Bacteria | 925 |
| 39 | Ga0157379_10077087 | 3300014968 | Bacteria | 2985 |
| 40 | Ga0182005_1001989 | 3300015265 | Bacteria | 7678 |
| 41 | Ga0163161_10000001 | 3300017792 | Bacteria | 2041488 |
| 42 | Ga0163161_10069777 | 3300017792 | Bacteria | 2569 |
| 43 | Ga0209758_1000204 | 3300025297 | Bacteria | 131754 |
| 44 | Ga0209758_1002372 | 3300025297 | Bacteria | 19378 |
| 45 | Ga0209050_1000053 | 3300025298 | Bacteria | 349521 |
| 46 | Ga0209257_1000705 | 3300025304 | Bacteria | 51728 |
| 47 | Ga0209257_1001993 | 3300025304 | Bacteria | 21934 |
| 48 | Ga0207696_1000001 | 3300025711 | Bacteria | 2579611 |
| 49 | Ga0207713_1000024 | 3300025735 | Bacteria | 339156 |
| 50 | Ga0207710_10000140 | 3300025900 | Bacteria | 83223 |
| 51 | Ga0207680_10144780 | 3300025903 | Bacteria | 1579 |
| 52 | Ga0207695_10000270 | 3300025913 | Bacteria | 130172 |
| 53 | Ga0207695_10001796 | 3300025913 | Bacteria | 33852 |
| 54 | Ga0207671_10053985 | 3300025914 | Bacteria | 2977 |
| 55 | Ga0207694_10003233 | 3300025924 | Bacteria | 12986 |
| 56 | Ga0209281_1004530 | 3300027111 | Bacteria | 4133 |
| 57 | Ga0207428_10051991 | 3300027907 | Bacteria | 3274 |
| 58 | Ga0207428_10108889 | 3300027907 | Bacteria | 2134 |
| 59 | Ga0307515_10026736 | 3300028794 | Bacteria | 9911 |
| 60 | Ga0307515_10033312 | 3300028794 | Bacteria | 8488 |
| 61 | Ga0307415_100012139 | 3300032126 | Bacteria | 4970 |
| 62 | Ga0307510_10195766 | 3300033180 | Bacteria | 1563 |
| 63 | Ga0237819_00677 | 3300038705 | Bacteria | 11089 |
| 64 | Ga0400488_24757 | 3300038741 | Bacteria | 21056 |
| 65 | Ga0400486_21114 | 3300038742 | Bacteria | 1992 |
| 66 | Ga0400487_54683 | 3300039110 | Bacteria | 13385 |
| 67 | Ga0439451_044997 | 3300042009 | Bacteria | 884 |
| 68 | Ga0450902_016917 | 3300042137 | Bacteria | 1190 |
| 69 | Ga0495617_004766 | 3300046452 | Bacteria | 4897 |
| 70 | Ga0495627_000018 | 3300046453 | Bacteria | 315125 |
| 71 | Ga0495627_066571 | 3300046453 | Bacteria | 1057 |
| 72 | Ga0495590_0000178 | 3300046457 | Bacteria | 37358 |
| 73 | Ga0495590_0020631 | 3300046457 | Bacteria | 2340 |
| 74 | Ga0495590_0040708 | 3300046457 | Bacteria | 1620 |
| 75 | Ga0495591_002882 | 3300046458 | Bacteria | 9225 |
| 76 | Ga0495591_009367 | 3300046458 | Bacteria | 3900 |
| 77 | Ga0495591_041769 | 3300046458 | Bacteria | 1300 |
| 78 | Ga0495638_0002850 | 3300046460 | Bacteria | 13862 |
| 79 | Ga0495638_0021096 | 3300046460 | Bacteria | 4296 |
| 80 | Ga0495638_0025800 | 3300046460 | Bacteria | 3815 |
| 81 | Ga0495638_0026052 | 3300046460 | Bacteria | 3795 |
| 82 | Ga0495638_0036467 | 3300046460 | Bacteria | 3133 |
| 83 | Ga0495650_0008090 | 3300046471 | Bacteria | 6198 |
| 84 | Ga0495605_0010488 | 3300046474 | Bacteria | 5182 |
| 85 | Ga0495605_0028393 | 3300046474 | Bacteria | 2888 |
| 86 | Ga0495605_0059301 | 3300046474 | Bacteria | 1838 |
| 87 | Ga0495605_0135326 | 3300046474 | Bacteria | 1108 |
| 88 | Ga0495584_0000019 | 3300046491 | Bacteria | 140608 |
| 89 | Ga0495584_0000084 | 3300046491 | Bacteria | 65138 |
| 90 | Ga0495584_0005379 | 3300046491 | Bacteria | 6788 |
| 91 | Ga0495584_0046689 | 3300046491 | Bacteria | 2184 |
| 92 | Ga0495585_0000983 | 3300046492 | Bacteria | 23878 |
| 93 | Ga0495585_0010817 | 3300046492 | Bacteria | 5421 |
| 94 | Ga0495585_0053982 | 3300046492 | Bacteria | 2223 |
| 95 | Ga0495607_0002010 | 3300046501 | Bacteria | 17065 |
| 96 | Ga0495607_0028098 | 3300046501 | Bacteria | 3473 |
| 97 | Ga0495583_0000445 | 3300046506 | Bacteria | 61949 |
| 98 | Ga0495583_0001410 | 3300046506 | Bacteria | 24498 |
| 99 | Ga0495583_0006043 | 3300046506 | Bacteria | 8022 |
| 100 | Ga0495583_0101072 | 3300046506 | Bacteria | 1230 |
| 101 | Ga0495583_0104959 | 3300046506 | Bacteria | 1202 |
| 102 | Ga0495606_0001830 | 3300046507 | Bacteria | 26928 |
| 103 | Ga0495606_0004721 | 3300046507 | Bacteria | 13430 |
| 104 | Ga0495606_0006111 | 3300046507 | Bacteria | 11241 |
| 105 | Ga0495610_0001435 | 3300046512 | Bacteria | 21058 |
| 106 | Ga0495610_0014100 | 3300046512 | Bacteria | 4715 |
| 107 | Ga0495610_0020361 | 3300046512 | Bacteria | 3684 |
| 108 | Ga0495610_0027777 | 3300046512 | Bacteria | 3001 |
| 109 | Ga0495610_0059504 | 3300046512 | Bacteria | 1823 |
| 110 | Ga0495616_0002738 | 3300046513 | Bacteria | 11534 |
| 111 | Ga0495616_0004846 | 3300046513 | Bacteria | 8427 |
| 112 | Ga0495616_0052348 | 3300046513 | Bacteria | 2033 |
| 113 | Ga0495616_0177215 | 3300046513 | Bacteria | 949 |
| 114 | Ga0495620_0000106 | 3300046515 | Bacteria | 66942 |
| 115 | Ga0495620_0002050 | 3300046515 | Bacteria | 11729 |
| 116 | Ga0495631_0044406 | 3300046518 | Bacteria | 1958 |
| 117 | Ga0495631_0075150 | 3300046518 | Bacteria | 1458 |
| 118 | Ga0495632_0000204 | 3300046519 | Bacteria | 60521 |
| 119 | Ga0495632_0001927 | 3300046519 | Bacteria | 16576 |
| 120 | Ga0495637_0000902 | 3300046520 | Bacteria | 19149 |
| 121 | Ga0495637_0009179 | 3300046520 | Bacteria | 4827 |
| 122 | Ga0495637_0011738 | 3300046520 | Bacteria | 4202 |
| 123 | Ga0495637_0014540 | 3300046520 | Bacteria | 3712 |
| 124 | Ga0495637_0014638 | 3300046520 | Bacteria | 3696 |
| 125 | Ga0495637_0074129 | 3300046520 | Bacteria | 1367 |
| 126 | Ga0495637_0074133 | 3300046520 | Bacteria | 1367 |
| 127 | Ga0495643_0002647 | 3300046522 | Bacteria | 13892 |
| 128 | Ga0495643_0028886 | 3300046522 | Bacteria | 3105 |
| 129 | Ga0495644_0018546 | 3300046523 | Bacteria | 2659 |
| 130 | Ga0495648_0004466 | 3300046524 | Bacteria | 11946 |
| 131 | Ga0495648_0005554 | 3300046524 | Bacteria | 10458 |
| 132 | Ga0495648_0026110 | 3300046524 | Bacteria | 3938 |
| 133 | Ga0495648_0075711 | 3300046524 | Bacteria | 1935 |
| 134 | Ga0495648_0138157 | 3300046524 | Bacteria | 1286 |
| 135 | Ga0495642_0000119 | 3300046528 | Bacteria | 45337 |
| 136 | Ga0495654_0000179 | 3300046530 | Bacteria | 62287 |
| 137 | Ga0495654_0003485 | 3300046530 | Bacteria | 9607 |
| 138 | Ga0495654_0004514 | 3300046530 | Bacteria | 8239 |
| 139 | Ga0495609_0005248 | 3300046538 | Bacteria | 6882 |
| 140 | Ga0495609_0030435 | 3300046538 | Bacteria | 2457 |
| 141 | Ga0495609_0034241 | 3300046538 | Bacteria | 2303 |
| 142 | Ga0495597_0001039 | 3300046542 | Bacteria | 21205 |
| 143 | Ga0495597_0042163 | 3300046542 | Bacteria | 2036 |
| 144 | Ga0495597_0067833 | 3300046542 | Bacteria | 1542 |
| 145 | Ga0495622_0002689 | 3300046557 | Bacteria | 8520 |
| 146 | Ga0495633_0004126 | 3300046558 | Bacteria | 9357 |
| 147 | Ga0495656_0016257 | 3300046615 | Bacteria | 2821 |
| 148 | Ga0495668_0098415 | 3300046616 | Bacteria | 1601 |
| 149 | Ga0495668_0159337 | 3300046616 | Bacteria | 1236 |
| 150 | Ga0495625_0012313 | 3300046660 | Bacteria | 6936 |
| 151 | Ga0495625_0023448 | 3300046660 | Bacteria | 4713 |
| 152 | Ga0495625_0029111 | 3300046660 | Bacteria | 4134 |
| 153 | Ga0495625_0125057 | 3300046660 | Bacteria | 1746 |
| 154 | Ga0495659_0001278 | 3300046664 | Bacteria | 8655 |
| 155 | Ga0495661_0012031 | 3300046665 | Bacteria | 5854 |
| 156 | Ga0495661_0027241 | 3300046665 | Bacteria | 3671 |
| 157 | Ga0495588_0002508 | 3300046674 | Bacteria | 7864 |
| 158 | Ga0495669_0048521 | 3300046684 | Bacteria | 1899 |
| 159 | Ga0495613_0022851 | 3300046689 | Bacteria | 4659 |
| 160 | Ga0495670_0001970 | 3300046691 | Bacteria | 10086 |
| 161 | Ga0495670_0011897 | 3300046691 | Bacteria | 4281 |
| 162 | Ga0495670_0012662 | 3300046691 | Bacteria | 4149 |
| 163 | Ga0495670_0033469 | 3300046691 | Bacteria | 2557 |
| 164 | Ga0495670_0148452 | 3300046691 | Bacteria | 1229 |
| 165 | Ga0495671_0000136 | 3300046692 | Bacteria | 65148 |
| 166 | Ga0495671_0001038 | 3300046692 | Bacteria | 19312 |
| 167 | Ga0495671_0011867 | 3300046692 | Bacteria | 4776 |
| 168 | Ga0495671_0012614 | 3300046692 | Bacteria | 4609 |
| 169 | Ga0495671_0013119 | 3300046692 | Bacteria | 4502 |
| 170 | Ga0495671_0242433 | 3300046692 | Bacteria | 870 |
| 171 | Ga0495649_0006131 | 3300046694 | Bacteria | 7513 |
| 172 | Ga0495649_0006650 | 3300046694 | Bacteria | 7183 |
| 173 | Ga0495649_0007188 | 3300046694 | Bacteria | 6832 |
| 174 | Ga0495649_0014265 | 3300046694 | Bacteria | 4562 |
| 175 | Ga0495649_0061380 | 3300046694 | Bacteria | 2021 |
| 176 | Ga0495649_0159450 | 3300046694 | Bacteria | 1183 |
| 177 | Ga0495589_0000002 | 3300046794 | Bacteria | 758846 |
| 178 | Ga0495589_0001849 | 3300046794 | Bacteria | 12001 |
| 179 | Ga0495589_0010754 | 3300046794 | Bacteria | 4756 |
| 180 | Ga0495660_0001165 | 3300046810 | Bacteria | 18689 |
| 181 | Ga0495660_0011000 | 3300046810 | Bacteria | 5257 |
| 182 | Ga0495660_0013689 | 3300046810 | Bacteria | 4701 |
| 183 | Ga0495660_0024876 | 3300046810 | Bacteria | 3406 |
| 184 | Ga0495660_0041357 | 3300046810 | Bacteria | 2552 |
| 185 | Ga0495660_0049697 | 3300046810 | Bacteria | 2287 |
| 186 | Ga0495672_0004546 | 3300047320 | Bacteria | 11295 |
| 187 | Ga0495672_0009714 | 3300047320 | Bacteria | 6936 |
| 188 | Ga0495672_0012833 | 3300047320 | Bacteria | 5819 |
| 189 | Ga0495672_0018598 | 3300047320 | Bacteria | 4607 |
| 190 | Ga0495672_0020538 | 3300047320 | Bacteria | 4323 |
| 191 | Ga0495672_0027710 | 3300047320 | Bacteria | 3595 |
| 192 | Ga0495683_0000564 | 3300047323 | Bacteria | 27981 |
| 193 | Ga0495683_0010706 | 3300047323 | Bacteria | 4838 |
| 194 | Ga0495683_0022369 | 3300047323 | Bacteria | 3251 |
| 195 | Ga0495683_0036981 | 3300047323 | Bacteria | 2477 |
| 196 | Ga0495683_0039334 | 3300047323 | Bacteria | 2390 |
| 197 | Ga0495687_001541 | 3300047443 | Bacteria | 20940 |
| 198 | Ga0495687_002798 | 3300047443 | Bacteria | 13462 |
| 199 | Ga0495677_0000425 | 3300047445 | Bacteria | 18123 |
| 200 | Ga0495679_004125 | 3300047446 | Bacteria | 6786 |
| 201 | Ga0495679_033058 | 3300047446 | Bacteria | 1654 |
| 202 | Ga0495685_075201 | 3300047447 | Bacteria | 1128 |
| 203 | Ga0495673_0000156 | 3300047469 | Bacteria | 118831 |
| 204 | Ga0495673_0000276 | 3300047469 | Bacteria | 69967 |
| 205 | Ga0495673_0001803 | 3300047469 | Bacteria | 16220 |
| 206 | Ga0495673_0002329 | 3300047469 | Bacteria | 13518 |
| 207 | Ga0495673_0003179 | 3300047469 | Bacteria | 10978 |
| 208 | Ga0495673_0028723 | 3300047469 | Bacteria | 2632 |
| 209 | Ga0495681_0003348 | 3300047470 | Bacteria | 11152 |
| 210 | Ga0495681_0008776 | 3300047470 | Bacteria | 6300 |
| 211 | Ga0495681_0008840 | 3300047470 | Bacteria | 6263 |
| 212 | Ga0495681_0026527 | 3300047470 | Bacteria | 3012 |
| 213 | Ga0495686_0001598 | 3300047472 | Bacteria | 23923 |
| 214 | Ga0495686_0005230 | 3300047472 | Bacteria | 10309 |
| 215 | Ga0495686_0043583 | 3300047472 | Bacteria | 2844 |
| 216 | Ga0495686_0166762 | 3300047472 | Bacteria | 1283 |
| 217 | Ga0495626_0000247 | 3300048091 | Bacteria | 62776 |
| 218 | Ga0495626_0002729 | 3300048091 | Bacteria | 11896 |
| 219 | Ga0495626_0003772 | 3300048091 | Bacteria | 9532 |
| 220 | Ga0496102_0765716 | 3300048905 | Bacteria | 888 |
| 221 | Ga0496103_0356951 | 3300048906 | Bacteria | 939 |
| 222 | Ga0496116_0000023 | 3300048919 | Bacteria | 475792 |
| 223 | Ga0496117_0000463 | 3300048920 | Bacteria | 67832 |
| 224 | Ga0496118_0002071 | 3300048921 | Bacteria | 28235 |
| 225 | Ga0496119_0034709 | 3300048922 | Bacteria | 3315 |
| 226 | Ga0496121_0250988 | 3300048924 | Bacteria | 1227 |
| 227 | Ga0495678_001280 | 3300049459 | Bacteria | 20347 |
| 228 | Ga0495678_005491 | 3300049459 | Bacteria | 6987 |
| 229 | Ga0495678_014525 | 3300049459 | Bacteria | 3658 |
| 230 | Ga0495678_017093 | 3300049459 | Bacteria | 3296 |
| 231 | Ga0495682_0000701 | 3300049460 | Bacteria | 21947 |
| 232 | Ga0495682_0002700 | 3300049460 | Bacteria | 8241 |
| 233 | Ga0495682_0009019 | 3300049460 | Bacteria | 3913 |
| 234 | Ga0495682_0030414 | 3300049460 | Bacteria | 1997 |
| 235 | nmdc:mga03n38_198874_c1 | 3300050490 | Bacteria | 1036 |
| 236 | nmdc:mga00v17_55813_c1 | 3300050491 | Bacteria | 2413 |
| 237 | nmdc:mga00v17_76008_c1 | 3300050491 | Bacteria | 2089 |
| 238 | nmdc:mga0k408_132542_c1 | 3300050493 | Bacteria | 1480 |
| 239 | nmdc:mga05p37_177741_c1 | 3300050507 | Bacteria | 2592 |
| 240 | nmdc:mga0qj67_69323_c1 | 3300050509 | Bacteria | 2812 |
| 241 | Ga0500583_0005724 | 3300053092 | Bacteria | 4196 |
| 242 | Ga0500583_0043357 | 3300053092 | Bacteria | 2054 |
| 243 | Ga0500651_0040706 | 3300053093 | Bacteria | 2928 |
| 244 | Ga0500622_0113726 | 3300053156 | Unclassified | 1319 |
| 245 | Ga0500645_002768 | 3300053730 | Bacteria | 7580 |
| 246 | 2506577554 | 2506520007 | Bacteria | 5442880 |
| 247 | 2506582692 | 2506520008 | Bacteria | 5443009 |
| 248 | 2508851496 | 2508501071 | Bacteria | 5454741 |
| 249 | 2511121261 | 2510917020 | Bacteria | 5657507 |
| 250 | 2511255083 | 2511231004 | Bacteria | 6669789 |
| 251 | 2511278140 | 2511231008 | Bacteria | 6624100 |
| 252 | 2511316036 | 2511231014 | Bacteria | 6462302 |
| 253 | 2511320131 | 2511231015 | Bacteria | 6598026 |
| 254 | 2511334156 | 2511231017 | Bacteria | 6503007 |
| 255 | 2511351285 | 2511231020 | Bacteria | 6115223 |
| 256 | 2511354429 | 2511231021 | Bacteria | 7302637 |
| 257 | 2656277445 | 2654587920 | Bacteria | 5475511 |
| 258 | 2656279104 | 2654587920 | Bacteria | 5475511 |
| 259 | 2689444036 | 2687453601 | Bacteria | 5546041 |
| 260 | 2739199382 | 2738543004 | Bacteria | 6381073 |
| 261 | 2807177053 | 2806310673 | Bacteria | 4801221 |
| 262 | 2862184075 | 2862178590 | Bacteria | 8583590 |
| 263 | 2869553408 | 2869551831 | Bacteria | 5474685 |
| 264 | 2889793437 | 2889790730 | Bacteria | 5689708 |
| 265 | 2889918252 | 2889914905 | Bacteria | 5702301 |
| 266 | 2996315539 | 2996310559 | Bacteria | 6357320 |
| 267 | 3007625265 | 3007619802 | Bacteria | 6411688 |
| 268 | 640937057 | 640753048 | Bacteria | 5495657 |
| 269 | Ga0105240_10000175 | |||
| 270 | JGI25153J46596_10003292 | |||
| 271 | JGI25153J46596_10039991 | |||
| 272 | rootH2_10125906 | |||
| 273 | rootH1_10313397 | |||
| 274 | Ga0055530_10000895 | |||
| 275 | Ga0055531_10001114 | |||
| 276 | Ga0065165_1000583 | |||
| 277 | Ga0065703_1018887 | |||
| 278 | Ga0065714_10012654 | |||
| 279 | Ga0070666_10152150 | |||
| 280 | Ga0068857_100283912 | |||
| 281 | Ga0068859_100682540 | |||
| 282 | Ga0068863_100045941 | |||
| 283 | Ga0081538_10021196 | |||
| 284 | Ga0081539_10013422 | |||
| 285 | Ga0075363_100058684 | |||
| 286 | Ga0075364_10037135 | |||
| 287 | Ga0075432_10024117 | |||
| 288 | Ga0075432_10051198 | |||
| 289 | Ga0075362_10054545 | |||
| 290 | Ga0068871_100013383 | |||
| 291 | Ga0075428_100091608 | |||
| 292 | Ga0075430_100089339 | |||
| 293 | Ga0097620_100682494 | |||
| 294 | Ga0079104_1006406 | |||
| 295 | Ga0105251_10001632 | |||
| 296 | Ga0105244_10127508 | |||
| 297 | Ga0105250_10000705 | |||
| 298 | Ga0105240_10001812 | |||
| 299 | Ga0105247_10000025 | |||
| 300 | Ga0105237_10092460 | |||
| 301 | Ga0105238_10001930 | |||
| 302 | Ga0157370_10007403 | |||
| 303 | Ga0157375_10236581 | |||
| 304 | Ga0157375_10395573 | |||
| 305 | Ga0182008_10005902 | |||
| 306 | Ga0182008_10243816 | |||
| 307 | Ga0157379_10077087 | |||
| 308 | Ga0182005_1001989 | |||
| 309 | Ga0163161_10000001 | |||
| 310 | Ga0163161_10069777 | |||
| 311 | Ga0209758_1000204 | |||
| 312 | Ga0209758_1002372 | |||
| 313 | Ga0209050_1000053 | |||
| 314 | Ga0209257_1000705 | |||
| 315 | Ga0209257_1001993 | |||
| 316 | Ga0207696_1000001 | |||
| 317 | Ga0207713_1000024 | |||
| 318 | Ga0207710_10000140 | |||
| 319 | Ga0207680_10144780 | |||
| 320 | Ga0207695_10000270 | |||
| 321 | Ga0207695_10001796 | |||
| 322 | Ga0207671_10053985 | |||
| 323 | Ga0207694_10003233 | |||
| 324 | Ga0209281_1004530 | |||
| 325 | Ga0207428_10051991 | |||
| 326 | Ga0207428_10108889 | |||
| 327 | Ga0307515_10026736 | |||
| 328 | Ga0307515_10033312 | |||
| 329 | Ga0307415_100012139 | |||
| 330 | Ga0307510_10195766 | |||
| 331 | Ga0237819_00677 | |||
| 332 | Ga0400488_24757 | |||
| 333 | Ga0400486_21114 | |||
| 334 | Ga0400487_54683 | |||
| 335 | Ga0439451_044997 | |||
| 336 | Ga0450902_016917 | |||
| 337 | Ga0495617_004766 | |||
| 338 | Ga0495627_000018 | |||
| 339 | Ga0495627_066571 | |||
| 340 | Ga0495590_0000178 | |||
| 341 | Ga0495590_0020631 | |||
| 342 | Ga0495590_0040708 | |||
| 343 | Ga0495591_002882 | |||
| 344 | Ga0495591_009367 | |||
| 345 | Ga0495591_041769 | |||
| 346 | Ga0495638_0002850 | |||
| 347 | Ga0495638_0021096 | |||
| 348 | Ga0495638_0025800 | |||
| 349 | Ga0495638_0026052 | |||
| 350 | Ga0495638_0036467 | |||
| 351 | Ga0495650_0008090 | |||
| 352 | Ga0495605_0010488 | |||
| 353 | Ga0495605_0028393 | |||
| 354 | Ga0495605_0059301 | |||
| 355 | Ga0495605_0135326 | |||
| 356 | Ga0495584_0000019 | |||
| 357 | Ga0495584_0000084 | |||
| 358 | Ga0495584_0005379 | |||
| 359 | Ga0495584_0046689 | |||
| 360 | Ga0495585_0000983 | |||
| 361 | Ga0495585_0010817 | |||
| 362 | Ga0495585_0053982 | |||
| 363 | Ga0495607_0002010 | |||
| 364 | Ga0495607_0028098 | |||
| 365 | Ga0495583_0000445 | |||
| 366 | Ga0495583_0001410 | |||
| 367 | Ga0495583_0006043 | |||
| 368 | Ga0495583_0101072 | |||
| 369 | Ga0495583_0104959 | |||
| 370 | Ga0495606_0001830 | |||
| 371 | Ga0495606_0004721 | |||
| 372 | Ga0495606_0006111 | |||
| 373 | Ga0495610_0001435 | |||
| 374 | Ga0495610_0014100 | |||
| 375 | Ga0495610_0020361 | |||
| 376 | Ga0495610_0027777 | |||
| 377 | Ga0495610_0059504 | |||
| 378 | Ga0495616_0002738 | |||
| 379 | Ga0495616_0004846 | |||
| 380 | Ga0495616_0052348 | |||
| 381 | Ga0495616_0177215 | |||
| 382 | Ga0495620_0000106 | |||
| 383 | Ga0495620_0002050 | |||
| 384 | Ga0495631_0044406 | |||
| 385 | Ga0495631_0075150 | |||
| 386 | Ga0495632_0000204 | |||
| 387 | Ga0495632_0001927 | |||
| 388 | Ga0495637_0000902 | |||
| 389 | Ga0495637_0009179 | |||
| 390 | Ga0495637_0011738 | |||
| 391 | Ga0495637_0014540 | |||
| 392 | Ga0495637_0014638 | |||
| 393 | Ga0495637_0074129 | |||
| 394 | Ga0495637_0074133 | |||
| 395 | Ga0495643_0002647 | |||
| 396 | Ga0495643_0028886 | |||
| 397 | Ga0495644_0018546 | |||
| 398 | Ga0495648_0004466 | |||
| 399 | Ga0495648_0005554 | |||
| 400 | Ga0495648_0026110 | |||
| 401 | Ga0495648_0075711 | |||
| 402 | Ga0495648_0138157 | |||
| 403 | Ga0495642_0000119 | |||
| 404 | Ga0495654_0000179 | |||
| 405 | Ga0495654_0003485 | |||
| 406 | Ga0495654_0004514 | |||
| 407 | Ga0495609_0005248 | |||
| 408 | Ga0495609_0030435 | |||
| 409 | Ga0495609_0034241 | |||
| 410 | Ga0495597_0001039 | |||
| 411 | Ga0495597_0042163 | |||
| 412 | Ga0495597_0067833 | |||
| 413 | Ga0495622_0002689 | |||
| 414 | Ga0495633_0004126 | |||
| 415 | Ga0495656_0016257 | |||
| 416 | Ga0495668_0098415 | |||
| 417 | Ga0495668_0159337 | |||
| 418 | Ga0495625_0012313 | |||
| 419 | Ga0495625_0023448 | |||
| 420 | Ga0495625_0029111 | |||
| 421 | Ga0495625_0125057 | |||
| 422 | Ga0495659_0001278 | |||
| 423 | Ga0495661_0012031 | |||
| 424 | Ga0495661_0027241 | |||
| 425 | Ga0495588_0002508 | |||
| 426 | Ga0495669_0048521 | |||
| 427 | Ga0495613_0022851 | |||
| 428 | Ga0495670_0001970 | |||
| 429 | Ga0495670_0011897 | |||
| 430 | Ga0495670_0012662 | |||
| 431 | Ga0495670_0033469 | |||
| 432 | Ga0495670_0148452 | |||
| 433 | Ga0495671_0000136 | |||
| 434 | Ga0495671_0001038 | |||
| 435 | Ga0495671_0011867 | |||
| 436 | Ga0495671_0012614 | |||
| 437 | Ga0495671_0013119 | |||
| 438 | Ga0495671_0242433 | |||
| 439 | Ga0495649_0006131 | |||
| 440 | Ga0495649_0006650 | |||
| 441 | Ga0495649_0007188 | |||
| 442 | Ga0495649_0014265 | |||
| 443 | Ga0495649_0061380 | |||
| 444 | Ga0495649_0159450 | |||
| 445 | Ga0495589_0000002 | |||
| 446 | Ga0495589_0001849 | |||
| 447 | Ga0495589_0010754 | |||
| 448 | Ga0495660_0001165 | |||
| 449 | Ga0495660_0011000 | |||
| 450 | Ga0495660_0013689 | |||
| 451 | Ga0495660_0024876 | |||
| 452 | Ga0495660_0041357 | |||
| 453 | Ga0495660_0049697 | |||
| 454 | Ga0495672_0004546 | |||
| 455 | Ga0495672_0009714 | |||
| 456 | Ga0495672_0012833 | |||
| 457 | Ga0495672_0018598 | |||
| 458 | Ga0495672_0020538 | |||
| 459 | Ga0495672_0027710 | |||
| 460 | Ga0495683_0000564 | |||
| 461 | Ga0495683_0010706 | |||
| 462 | Ga0495683_0022369 | |||
| 463 | Ga0495683_0036981 | |||
| 464 | Ga0495683_0039334 | |||
| 465 | Ga0495687_001541 | |||
| 466 | Ga0495687_002798 | |||
| 467 | Ga0495677_0000425 | |||
| 468 | Ga0495679_004125 | |||
| 469 | Ga0495679_033058 | |||
| 470 | Ga0495685_075201 | |||
| 471 | Ga0495673_0000156 | |||
| 472 | Ga0495673_0000276 | |||
| 473 | Ga0495673_0001803 | |||
| 474 | Ga0495673_0002329 | |||
| 475 | Ga0495673_0003179 | |||
| 476 | Ga0495673_0028723 | |||
| 477 | Ga0495681_0003348 | |||
| 478 | Ga0495681_0008776 | |||
| 479 | Ga0495681_0008840 | |||
| 480 | Ga0495681_0026527 | |||
| 481 | Ga0495686_0001598 | |||
| 482 | Ga0495686_0005230 | |||
| 483 | Ga0495686_0043583 | |||
| 484 | Ga0495686_0166762 | |||
| 485 | Ga0495626_0000247 | |||
| 486 | Ga0495626_0002729 | |||
| 487 | Ga0495626_0003772 | |||
| 488 | Ga0496102_0765716 | |||
| 489 | Ga0496103_0356951 | |||
| 490 | Ga0496116_0000023 | |||
| 491 | Ga0496117_0000463 | |||
| 492 | Ga0496118_0002071 | |||
| 493 | Ga0496119_0034709 | |||
| 494 | Ga0496121_0250988 | |||
| 495 | Ga0495678_001280 | |||
| 496 | Ga0495678_005491 | |||
| 497 | Ga0495678_014525 | |||
| 498 | Ga0495678_017093 | |||
| 499 | Ga0495682_0000701 | |||
| 500 | Ga0495682_0002700 | |||
| 501 | Ga0495682_0009019 | |||
| 502 | Ga0495682_0030414 | |||
| 503 | nmdc:mga03n38_198874_c1 | |||
| 504 | nmdc:mga00v17_55813_c1 | |||
| 505 | nmdc:mga00v17_76008_c1 | |||
| 506 | nmdc:mga0k408_132542_c1 | |||
| 507 | nmdc:mga05p37_177741_c1 | |||
| 508 | nmdc:mga0qj67_69323_c1 | |||
| 509 | Ga0500583_0005724 | |||
| 510 | Ga0500583_0043357 | |||
| 511 | Ga0500651_0040706 | |||
| 512 | Ga0500622_0113726 | |||
| 513 | Ga0500645_002768 | |||
| 514 | 2506577554 | |||
| 515 | 2506582692 | |||
| 516 | 2508851496 | |||
| 517 | 2511121261 | |||
| 518 | 2511255083 | |||
| 519 | 2511278140 | |||
| 520 | 2511316036 | |||
| 521 | 2511320131 | |||
| 522 | 2511334156 | |||
| 523 | 2511351285 | |||
| 524 | 2511354429 | |||
| 525 | 2656277445 | |||
| 526 | 2656279104 | |||
| 527 | 2689444036 | |||
| 528 | 2739199382 | |||
| 529 | 2807177053 | |||
| 530 | 2862184075 | |||
| 531 | 2869553408 | |||
| 532 | 2889793437 | |||
| 533 | 2889918252 | |||
| 534 | 2996315539 | |||
| 535 | 3007625265 | |||
| 536 | 640937057 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 8oy0-assembly1.cif.gz_C | atp phosphoribosyltransferase (hiszg atpprt) from acinetobacter baumanii | 0.8444 | 14 | 41 |
| 8oy0-assembly1.cif.gz_B | atp phosphoribosyltransferase (hiszg atpprt) from acinetobacter baumanii | 0.8432 | 14 | 41 |
| 8oy0-assembly1.cif.gz_D | atp phosphoribosyltransferase (hiszg atpprt) from acinetobacter baumanii | 0.8408 | 14 | 41 |
| 8oy0-assembly1.cif.gz_A | atp phosphoribosyltransferase (hiszg atpprt) from acinetobacter baumanii | 0.8397 | 14 | 41 |
| 3e48-assembly1.cif.gz_A | crystal structure of a nucleoside-diphosphate-sugar epimerase (sav0421) from staphylococcus aureus, northeast structural genomics consortium target zr319 | 0.8153 | 15 | 263 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_Q5QMG5_99_194_3.40.50.720 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain | 0.9937 | 14 | 42 | 3.40.50.720 |
| af_A0A1D6H4Q8_14_113_3.40.50.720 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain | 0.8688 | 14 | 74 | 3.40.50.720 |
| af_Q54LX4_3_401_3.50.50.60 | Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain | 0.8665 | 14 | 44 | 3.50.50.60 |
| af_F4JRN8_123_262_3.40.50.720 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain | 0.8645 | 14 | 68 | 3.40.50.720 |
| af_Q54LW0_12_289_3.40.50.720 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain | 0.843 | 16 | 265 | 3.40.50.720 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A7Y6XMV1-F1-model_v4 | NmrA family transcriptional regulator | 0.979 | 14 | 100 |
|
| AF-A0A2D8AE23-F1-model_v4 | NmrA family transcriptional regulator | 0.9731 | 123 | 271 |
|
| AF-A0A1C5DWP0-F1-model_v4 | NmrA-like family protein | 0.9707 | 135 | 271 |
|
| AF-A0A101TMQ5-F1-model_v4 | NmrA-like domain-containing protein | 0.9647 | 139 | 273 |
|
| AF-A0A5S4EUB1-F1-model_v4 | NmrA family transcriptional regulator | 0.9626 | 14 | 273 |
|