F375502

General Info

Members Datasets Scaffolds Average Seq Length
268 145 268 443

Family's Representative Sequence

Representative Sequence 3300013105|Ga0157369_10004612|Ga0157369_100046129
Length 491
Sequence MVALLPKTSVMRHGEKGRLVPMLALGVFAAALPAIVEVIWGGYRVNFTSTLHFYSVGISALVATAAAAGLTIIGARRGDTRTVVVGTAFAVMASLLALHGFSTPGVVVGNNGVIAFTGGATLPAGAVILAFSSFTLPPFLRNIRPLLIVEAILLTAILALGASALVFPSLVPSVPAPNSTEAMTVLTIGLAAFALLAYRSIRTFLLTQRALDLAVAVGLVWLATALIPALTQDYTYLGWWMGHEIELDGILLVGVAVAIDLARAAQSRPLAGDLGGAELVAAEAVFLGSHVRALTVLLGEKDEYTERHTRRVALRSVEVGEVLGLSGNRLRQLAIGGLVHDIGKLSVPDAILKKPGALDEHEYAVVQRHPERGNKLLAELGGFSEGVRQLVLNHHERLDGAGYPRGLSGEEIDLDTRILTVCDVYDALISKRVYRDAWSHEDAMGLLRRETGTAFDERCVDALERVISGERGESTAQPQAAPLRTAAASAS

Samples

Sample ID Description Type Environment
1 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
7 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
11 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
12 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
13 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
14 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
15 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
16 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
17 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
18 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
19 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
20 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
21 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
22 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
23 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
24 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
25 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
26 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
27 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
28 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
29 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
30 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
31 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
32 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
33 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
35 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
36 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
37 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
38 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
39 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
40 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
41 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
42 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
43 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
44 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
57 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
58 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
59 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
60 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
61 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
62 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
63 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
64 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
65 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
66 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
67 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
68 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
69 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
70 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
71 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
72 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
73 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
74 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
75 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
76 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
77 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
78 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
79 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
80 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
81 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
82 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
83 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
84 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
85 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
86 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
87 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
88 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
89 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
90 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
91 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
92 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
93 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
94 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
95 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
96 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
97 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
98 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
99 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
100 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
101 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
102 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
103 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
104 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
105 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
106 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
107 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
108 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
109 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
110 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
111 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
112 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
113 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
114 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
115 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
117 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
118 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
123 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
124 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
125 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
126 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
127 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
128 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
129 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
130 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
131 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
132 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
133 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
134 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
135 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
136 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
139 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
140 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
141 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
142 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
143 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
144 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
145 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.51
Metatranscriptomes 1.49
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.12
Nodule 0
Rhizoplane 9.7
Rhizosphere 87.69
Stem 0
Stem Tuber 0
Unclassified 1.49

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25407J50210_10000435 3300003373 Bacteria 8182
2 Ga0070683_100011440 3300005329 Bacteria 7671
3 Ga0070683_100026830 3300005329 Bacteria 5191
4 Ga0070683_100077335 3300005329 Bacteria 3112
5 Ga0070680_100042454 3300005336 Bacteria 3691
6 Ga0070680_100088541 3300005336 Bacteria 2561
7 Ga0070682_100016746 3300005337 Bacteria 4266
8 Ga0070660_100001169 3300005339 Bacteria 17754
9 Ga0070660_100018066 3300005339 Bacteria 5146
10 Ga0070660_100160712 3300005339 Bacteria 1810
11 Ga0070661_100012483 3300005344 Bacteria 5942
12 Ga0070659_100008022 3300005366 Bacteria 7696
13 Ga0070714_100106599 3300005435 Bacteria 2476
14 Ga0070713_100066870 3300005436 Bacteria 3024
15 Ga0070713_100216504 3300005436 Bacteria 1736
16 Ga0070681_10006197 3300005458 Bacteria 11625
17 Ga0070681_10049065 3300005458 Bacteria 4217
18 Ga0070681_10058451 3300005458 Bacteria 3836
19 Ga0070698_100025945 3300005471 Bacteria 6104
20 Ga0070698_100065202 3300005471 Bacteria 3668
21 Ga0070679_100038491 3300005530 Bacteria 4754
22 Ga0070679_100045461 3300005530 Bacteria 4375
23 Ga0070684_100022350 3300005535 Bacteria 5275
24 Ga0070684_100026405 3300005535 Bacteria 4892
25 Ga0070684_100030706 3300005535 Bacteria 4569
26 Ga0070696_100028731 3300005546 Bacteria 3795
27 Ga0070693_100009714 3300005547 Bacteria 4794
28 Ga0070665_100040162 3300005548 Bacteria 4704
29 Ga0068855_100029020 3300005563 Bacteria 6616
30 Ga0068855_100040237 3300005563 Bacteria 5548
31 Ga0068855_100042795 3300005563 Bacteria 5366
32 Ga0068857_100020606 3300005577 Bacteria 5802
33 Ga0068856_100197141 3300005614 Bacteria 2028
34 Ga0068852_100046532 3300005616 Bacteria 3698
35 Ga0068870_10015789 3300005840 Bacteria 3592
36 Ga0081538_10000254 3300005981 Bacteria 60558
37 Ga0081538_10007203 3300005981 Bacteria 9656
38 Ga0081538_10035100 3300005981 Bacteria 3301
39 Ga0081539_10010009 3300005985 Bacteria 7808
40 Ga0075365_10028469 3300006038 Bacteria 3564
41 Ga0075364_10105600 3300006051 Bacteria 1876
42 Ga0070712_100018254 3300006175 Bacteria 4553
43 Ga0075431_100191351 3300006847 Bacteria 2096
44 Ga0075433_10039166 3300006852 Bacteria 4097
45 Ga0075434_100071853 3300006871 Bacteria 3452
46 Ga0075436_100002185 3300006914 Bacteria 13485
47 Ga0075435_100016451 3300007076 Bacteria 5577
48 Ga0075435_100066150 3300007076 Bacteria 2940
49 Ga0105245_10063869 3300009098 Bacteria 3326
50 Ga0114129_10005740 3300009147 Bacteria 17586
51 Ga0114129_10006422 3300009147 Bacteria 16671
52 Ga0105237_10035736 3300009545 Bacteria 5026
53 Ga0105237_10041208 3300009545 Bacteria 4658
54 Ga0105238_10017426 3300009551 Bacteria 7300
55 Ga0157370_10206798 3300013104 Bacteria 1820
56 Ga0157369_10004612 3300013105 Bacteria 16199
57 Ga0157369_10004705 3300013105 Bacteria 16044
58 Ga0157369_10008710 3300013105 Bacteria 11632
59 Ga0157369_10086138 3300013105 Bacteria 3356
60 Ga0157374_10063824 3300013296 Bacteria 3454
61 Ga0157372_10027220 3300013307 Bacteria 6224
62 Ga0157372_10059682 3300013307 Bacteria 4267
63 Ga0157375_10220064 3300013308 Bacteria 2057
64 Ga0206356_10446391 3300020070 Bacteria 2738
65 Ga0206356_11546394 3300020070 Bacteria 2880
66 Ga0206353_10581558 3300020082 Bacteria 12890
67 Ga0206353_12044900 3300020082 Bacteria 1663
68 Ga0213876_10038707 3300021384 Bacteria 2518
69 Ga0207705_10023028 3300025909 Bacteria 4442
70 Ga0207707_10047023 3300025912 Bacteria 3758
71 Ga0207707_10181880 3300025912 Bacteria 1835
72 Ga0207695_10276156 3300025913 Bacteria 1575
73 Ga0207693_10016373 3300025915 Bacteria 5926
74 Ga0207660_10046979 3300025917 Bacteria 3050
75 Ga0207657_10002139 3300025919 Bacteria 21399
76 Ga0207657_10006302 3300025919 Bacteria 12328
77 Ga0207657_10024709 3300025919 Bacteria 5555
78 Ga0207657_10064179 3300025919 Bacteria 3136
79 Ga0207652_10005789 3300025921 Bacteria 10026
80 Ga0207652_10046412 3300025921 Bacteria 3706
81 Ga0207694_10117477 3300025924 Bacteria 2121
82 Ga0207690_10049069 3300025932 Bacteria 2811
83 Ga0207667_10034001 3300025949 Bacteria 5476
84 Ga0207667_10143067 3300025949 Bacteria 2462
85 Ga0207674_10021875 3300026116 Bacteria 6880
86 Ga0268266_10067736 3300028379 Bacteria 3090
87 Ga0265319_1032984 3300028563 Bacteria 1791
88 Ga0265318_10009468 3300028577 Bacteria 4284
89 Ga0307406_10011666 3300031901 Bacteria 4988
90 Ga0307409_100012380 3300031995 Bacteria 5435
91 Ga0307416_100000650 3300032002 Bacteria 17947
92 Ga0307415_100000143 3300032126 Bacteria 31696
93 Ga0395899_0002355 3300037312 Bacteria 15381
94 Ga0395899_0006657 3300037312 Bacteria 8954
95 Ga0395899_0020189 3300037312 Bacteria 5055
96 Ga0395900_0003572 3300037418 Bacteria 16711
97 Ga0395900_0005251 3300037418 Bacteria 13588
98 Ga0395900_0009788 3300037418 Bacteria 9823
99 Ga0395900_0030593 3300037418 Bacteria 5528
100 Ga0395900_0047666 3300037418 Bacteria 4413
101 Ga0395900_0106909 3300037418 Bacteria 2874
102 Ga0395900_0108851 3300037418 Bacteria 2847
103 Ga0395900_0145944 3300037418 Bacteria 2419
104 Ga0395900_0163546 3300037418 Bacteria 2269
105 Ga0395898_0008026 3300037466 Bacteria 11193
106 Ga0395898_0024241 3300037466 Bacteria 6119
107 Ga0395898_0050938 3300037466 Bacteria 4050
108 Ga0395898_0080677 3300037466 Bacteria 3137
109 Ga0395898_0135167 3300037466 Bacteria 2361
110 Ga0395898_0149983 3300037466 Bacteria 2231
111 Ga0395905_0008558 3300037471 Bacteria 10091
112 Ga0395905_0020490 3300037471 Bacteria 6265
113 Ga0395905_0052013 3300037471 Bacteria 3836
114 Ga0395905_0160495 3300037471 Bacteria 2113
115 Ga0395905_0238718 3300037471 Bacteria 1699
116 Ga0395901_0004256 3300038443 Bacteria 14439
117 Ga0395901_0008181 3300038443 Bacteria 10570
118 Ga0395901_0009462 3300038443 Bacteria 9887
119 Ga0395901_0071980 3300038443 Bacteria 3603
120 Ga0395901_0103167 3300038443 Bacteria 2992
121 Ga0395901_0118692 3300038443 Bacteria 2779
122 Ga0436365_1280961 3300039437 Bacteria 4330
123 Ga0436363_0391826 3300039450 Bacteria 2224
124 Ga0466966_0033815 3300044684 Bacteria 3309
125 Ga0466961_0001257 3300044693 Bacteria 15630
126 Ga0466963_0003290 3300044694 Bacteria 9212
127 Ga0466963_0013529 3300044694 Bacteria 5011
128 Ga0466963_0020007 3300044694 Bacteria 4206
129 Ga0466963_0044659 3300044694 Bacteria 2917
130 Ga0466963_0052508 3300044694 Bacteria 2705
131 Ga0466963_0066851 3300044694 Bacteria 2411
132 Ga0466964_0007133 3300044706 Bacteria 4179
133 Ga0466971_0004595 3300044719 Bacteria 5964
134 Ga0466971_0024230 3300044719 Bacteria 2708
135 Ga0466968_0012472 3300044735 Bacteria 3328
136 Ga0466957_0009762 3300044842 Bacteria 5483
137 Ga0466959_0026430 3300045049 Bacteria 4302
138 Ga0466958_0000213 3300045836 Bacteria 21795
139 Ga0466958_0003479 3300045836 Bacteria 8174
140 Ga0466958_0020396 3300045836 Bacteria 3864
141 Ga0466967_0009219 3300045976 Bacteria 7305
142 Ga0466967_0020227 3300045976 Bacteria 5374
143 Ga0466967_0030980 3300045976 Bacteria 4496
144 Ga0466967_0135875 3300045976 Bacteria 2286
145 Ga0495651_0043392 3300046462 Bacteria 3489
146 Ga0495582_0013234 3300046473 Bacteria 4540
147 Ga0495639_0028719 3300046475 Bacteria 2465
148 Ga0495608_0009720 3300046511 Bacteria 6711
149 Ga0495665_0043582 3300046531 Bacteria 2386
150 Ga0495587_0029968 3300046536 Bacteria 3301
151 Ga0495623_0015068 3300046679 Bacteria 4998
152 Ga0495624_0027408 3300046690 Bacteria 3731
153 Ga0495600_0133407 3300046809 Unclassified 1613
154 Ga0495581_0000299 3300047315 Bacteria 24150
155 Ga0495674_0202785 3300047319 Unclassified 1645
156 Ga0495676_0011923 3300047321 Bacteria 7842
157 Ga0495684_0083609 3300047471 Bacteria 2421
158 Ga0496101_0054725 3300048904 Bacteria 2881
159 Ga0496101_0090045 3300048904 Bacteria 2281
160 Ga0496101_0153155 3300048904 Bacteria 1764
161 Ga0496102_0006043 3300048905 Bacteria 10315
162 Ga0496102_0108039 3300048905 Bacteria 2591
163 Ga0496102_0127900 3300048905 Bacteria 2376
164 Ga0496103_0018819 3300048906 Bacteria 4146
165 Ga0496103_0022654 3300048906 Bacteria 3782
166 Ga0496104_0004539 3300048907 Bacteria 12094
167 Ga0496105_0029171 3300048908 Bacteria 4515
168 Ga0496107_0049863 3300048910 Bacteria 3017
169 Ga0496108_0001639 3300048911 Bacteria 17745
170 Ga0496109_0006478 3300048912 Bacteria 9857
171 Ga0496109_0209621 3300048912 Bacteria 1833
172 Ga0496110_0003327 3300048913 Bacteria 12281
173 Ga0496110_0008922 3300048913 Bacteria 8083
174 Ga0496111_0033452 3300048914 Bacteria 3666
175 Ga0496111_0049678 3300048914 Bacteria 3025
176 Ga0496111_0053140 3300048914 Bacteria 2926
177 Ga0496112_0020668 3300048915 Bacteria 6244
178 Ga0496112_0039362 3300048915 Bacteria 4620
179 Ga0496113_0026874 3300048916 Bacteria 4119
180 Ga0496114_0013664 3300048917 Bacteria 6509
181 Ga0496114_0040785 3300048917 Bacteria 3844
182 Ga0496115_0014546 3300048918 Bacteria 5958
183 Ga0496115_0166260 3300048918 Bacteria 1824
184 Ga0496126_0041457 3300048929 Bacteria 4260
185 Ga0501031_0000134 3300049568 Bacteria 40963
186 Ga0501031_0002513 3300049568 Bacteria 11678
187 Ga0501032_0013281 3300049569 Bacteria 5862
188 Ga0501032_0014944 3300049569 Bacteria 5491
189 Ga0501033_0000939 3300049570 Bacteria 26506
190 Ga0501033_0001567 3300049570 Bacteria 20181
191 Ga0501034_0023546 3300049571 Bacteria 6275
192 Ga0501034_0083321 3300049571 Bacteria 3200
193 Ga0501036_0000222 3300049572 Bacteria 38277
194 Ga0501036_0005262 3300049572 Bacteria 10467
195 Ga0501036_0084776 3300049572 Bacteria 2678
196 Ga0501037_0002224 3300049573 Bacteria 14019
197 Ga0501037_0012481 3300049573 Bacteria 6257
198 Ga0501038_0000395 3300049574 Bacteria 37876
199 Ga0501038_0008222 3300049574 Bacteria 9601
200 Ga0501038_0013862 3300049574 Bacteria 7345
201 Ga0501039_0000317 3300049575 Bacteria 34072
202 Ga0501039_0014408 3300049575 Bacteria 6054
203 Ga0501040_0000298 3300049576 Bacteria 28961
204 Ga0501041_0000096 3300049577 Bacteria 35888
205 Ga0501041_0008335 3300049577 Bacteria 6100
206 Ga0501041_0121704 3300049577 Bacteria 1622
207 Ga0501042_0000009 3300049578 Bacteria 60077
208 Ga0501043_0000462 3300049579 Bacteria 36250
209 Ga0501043_0003972 3300049579 Bacteria 12113
210 Ga0501046_0000804 3300049580 Bacteria 30489
211 Ga0501046_0005690 3300049580 Bacteria 11124
212 Ga0501047_0001220 3300049581 Bacteria 25496
213 Ga0501048_0000514 3300049582 Bacteria 27128
214 Ga0501048_0003885 3300049582 Bacteria 11368
215 Ga0501048_0016673 3300049582 Bacteria 5416
216 Ga0501048_0045911 3300049582 Bacteria 3119
217 Ga0501067_0001499 3300049583 Bacteria 12718
218 Ga0501068_0000453 3300049584 Bacteria 20834
219 Ga0501068_0017513 3300049584 Bacteria 4144
220 Ga0501069_0001506 3300049585 Bacteria 11516
221 Ga0501069_0006184 3300049585 Bacteria 6255
222 Ga0501069_0008191 3300049585 Bacteria 5488
223 Ga0501069_0011952 3300049585 Bacteria 4607
224 Ga0501070_0003107 3300049586 Bacteria 14461
225 Ga0501070_0003537 3300049586 Bacteria 13513
226 Ga0501071_0000073 3300049587 Bacteria 35884
227 Ga0501071_0042214 3300049587 Bacteria 3266
228 Ga0501071_0086522 3300049587 Bacteria 2299
229 Ga0501072_0000525 3300049588 Bacteria 27507
230 Ga0501074_0000235 3300049590 Bacteria 30883
231 Ga0501074_0011723 3300049590 Bacteria 6371
232 Ga0501074_0024179 3300049590 Bacteria 4415
233 Ga0501075_0000602 3300049591 Bacteria 22011
234 Ga0501076_0000068 3300049592 Bacteria 51457
235 Ga0501076_0023025 3300049592 Bacteria 4795
236 Ga0501076_0149286 3300049592 Bacteria 1901
237 Ga0501077_0000066 3300049593 Bacteria 52906
238 Ga0501077_0019158 3300049593 Bacteria 4327
239 Ga0501077_0042519 3300049593 Bacteria 2889
240 Ga0501079_0000001 3300049741 Bacteria 121247
241 Ga0501079_0131785 3300049741 Bacteria 1945
242 Ga0501079_0322459 3300049741 Bacteria 1209
243 Ga0501080_0000248 3300049742 Bacteria 40642
244 Ga0501080_0001748 3300049742 Bacteria 18618
245 Ga0501080_0073863 3300049742 Bacteria 3172
246 Ga0501081_0000001 3300049743 Bacteria 115059
247 Ga0501081_0003050 3300049743 Bacteria 10628
248 Ga0501081_0008341 3300049743 Bacteria 6724
249 Ga0501083_0000058 3300049744 Bacteria 78835
250 Ga0501083_0000860 3300049744 Bacteria 19998
251 Ga0501083_0054009 3300049744 Bacteria 2696
252 Ga0501035_0000649 3300049822 Bacteria 38289
253 Ga0501035_0008385 3300049822 Bacteria 9623
254 Ga0501035_0012047 3300049822 Bacteria 7999
255 Ga0501044_0017793 3300049823 Bacteria 7623
256 Ga0501044_0105140 3300049823 Bacteria 2836
257 Ga0501045_0018410 3300049824 Bacteria 4968
258 nmdc:mga00v17_83580_c2 3300050491 Bacteria 1284
259 nmdc:mga05p37_215102_c1 3300050507 Unclassified 2322
260 nmdc:mga0rr50_22074_c1 3300050513 Bacteria 4361
261 Ga0501084_0000848 3300054114 Bacteria 23632
262 Ga0501082_0000217 3300060353 Bacteria 50193
263 Ga0501082_0069157 3300060353 Bacteria 3039
264 Ga0501082_0137587 3300060353 Bacteria 2119
265 Ga0466962_0001074 3300061719 Bacteria 12561
266 Ga0530510_0000098 3300061734 Bacteria 47350
267 Ga0530510_0053738 3300061734 Bacteria 2910
268 Ga0530510_0095247 3300061734 Bacteria 2174

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300049741 Ga0501079_0322459 Ga0501079_0322459_51_1064 314
2 3300038443 Ga0395901_0071980 Ga0395901_0071980_1785_3224 341
3 3300013308 Ga0157375_10220064 Ga0157375_102200641 345
4 3300049592 Ga0501076_0023025 Ga0501076_0023025_3611_4783 348
5 3300049587 Ga0501071_0086522 Ga0501071_0086522_616_2025 360
6 3300005981 Ga0081538_10035100 Ga0081538_100351002 361
7 3300037466 Ga0395898_0050938 Ga0395898_0050938_666_2102 362
8 3300037471 Ga0395905_0020490 Ga0395905_0020490_1634_3070 362
9 3300038443 Ga0395901_0004256 Ga0395901_0004256_9784_11220 362
10 3300049570 Ga0501033_0000939 Ga0501033_0000939_5234_6640 362
11 3300049572 Ga0501036_0005262 Ga0501036_0005262_5454_6860 362
12 3300049574 Ga0501038_0008222 Ga0501038_0008222_4012_5418 362
13 3300049575 Ga0501039_0014408 Ga0501039_0014408_1041_2447 362
14 3300049579 Ga0501043_0003972 Ga0501043_0003972_3142_4548 362
15 3300049582 Ga0501048_0003885 Ga0501048_0003885_5773_7179 362
16 3300049585 Ga0501069_0001506 Ga0501069_0001506_871_2277 362
17 3300049586 Ga0501070_0003107 Ga0501070_0003107_9997_11403 362
18 3300049587 Ga0501071_0042214 Ga0501071_0042214_983_2389 362
19 3300049590 Ga0501074_0011723 Ga0501074_0011723_81_1487 362
20 3300049742 Ga0501080_0001748 Ga0501080_0001748_1797_3203 362
21 3300049743 Ga0501081_0003050 Ga0501081_0003050_7554_8960 362
22 3300049744 Ga0501083_0000860 Ga0501083_0000860_1797_3203 362
23 3300049822 Ga0501035_0008385 Ga0501035_0008385_4028_5434 362
24 3300049823 Ga0501044_0105140 Ga0501044_0105140_929_2335 362
25 3300060353 Ga0501082_0069157 Ga0501082_0069157_878_2284 362
26 3300049568 Ga0501031_0000134 Ga0501031_0000134_33184_34581 366
27 3300049569 Ga0501032_0013281 Ga0501032_0013281_2009_3406 366
28 3300049570 Ga0501033_0001567 Ga0501033_0001567_17630_19027 366
29 3300049571 Ga0501034_0083321 Ga0501034_0083321_132_1529 366
30 3300049572 Ga0501036_0000222 Ga0501036_0000222_29432_30829 366
31 3300049573 Ga0501037_0002224 Ga0501037_0002224_8639_10036 366
32 3300049574 Ga0501038_0000395 Ga0501038_0000395_33390_34787 366
33 3300049575 Ga0501039_0000317 Ga0501039_0000317_28869_30266 366
34 3300049576 Ga0501040_0000298 Ga0501040_0000298_18554_19951 366
35 3300049577 Ga0501041_0000096 Ga0501041_0000096_17571_18968 366
36 3300049578 Ga0501042_0000009 Ga0501042_0000009_19512_20909 366
37 3300049579 Ga0501043_0000462 Ga0501043_0000462_17320_18717 366
38 3300049580 Ga0501046_0000804 Ga0501046_0000804_17274_18671 366
39 3300049581 Ga0501047_0001220 Ga0501047_0001220_2265_3662 366
40 3300049582 Ga0501048_0000514 Ga0501048_0000514_4665_6062 366
41 3300049584 Ga0501068_0000453 Ga0501068_0000453_10771_12168 366
42 3300049585 Ga0501069_0006184 Ga0501069_0006184_2778_4175 366
43 3300049586 Ga0501070_0003537 Ga0501070_0003537_5524_6921 366
44 3300049587 Ga0501071_0000073 Ga0501071_0000073_16917_18314 366
45 3300049588 Ga0501072_0000525 Ga0501072_0000525_19238_20635 366
46 3300049590 Ga0501074_0000235 Ga0501074_0000235_28861_30258 366
47 3300049591 Ga0501075_0000602 Ga0501075_0000602_17229_18626 366
48 3300049592 Ga0501076_0000068 Ga0501076_0000068_29465_30862 366
49 3300049593 Ga0501077_0000066 Ga0501077_0000066_22006_23403 366
50 3300049741 Ga0501079_0000001 Ga0501079_0000001_1252_2649 366
51 3300049742 Ga0501080_0000248 Ga0501080_0000248_20972_22369 366
52 3300049743 Ga0501081_0000001 Ga0501081_0000001_1252_2649 366
53 3300049744 Ga0501083_0000058 Ga0501083_0000058_62005_63402 366
54 3300049822 Ga0501035_0000649 Ga0501035_0000649_28098_29495 366
55 3300054114 Ga0501084_0000848 Ga0501084_0000848_4665_6062 366
56 3300060353 Ga0501082_0000217 Ga0501082_0000217_30161_31558 366
57 3300061734 Ga0530510_0000098 Ga0530510_0000098_18636_20033 366
58 3300048906 Ga0496103_0018819 Ga0496103_0018819_19_1170 368
59 3300048918 Ga0496115_0166260 Ga0496115_0166260_32_1186 368
60 3300049592 Ga0501076_0149286 Ga0501076_0149286_15_1367 371
61 3300037418 Ga0395900_0003572 Ga0395900_0003572_12011_13447 372
62 3300013104 Ga0157370_10206798 Ga0157370_102067981 378
63 3300044694 Ga0466963_0013529 Ga0466963_0013529_1839_3236 378
64 3300045976 Ga0466967_0030980 Ga0466967_0030980_3123_4481 378
65 3300045976 Ga0466967_0135875 Ga0466967_0135875_140_1564 381
66 3300037471 Ga0395905_0052013 Ga0395905_0052013_1138_2595 382
67 3300049568 Ga0501031_0002513 Ga0501031_0002513_7793_9196 382
68 3300049569 Ga0501032_0014944 Ga0501032_0014944_3911_5314 382
69 3300049571 Ga0501034_0023546 Ga0501034_0023546_139_1542 382
70 3300049572 Ga0501036_0084776 Ga0501036_0084776_1234_2637 382
71 3300049573 Ga0501037_0012481 Ga0501037_0012481_3515_4918 382
72 3300049574 Ga0501038_0013862 Ga0501038_0013862_5584_6987 382
73 3300049577 Ga0501041_0008335 Ga0501041_0008335_1819_3222 382
74 3300049580 Ga0501046_0005690 Ga0501046_0005690_386_1789 382
75 3300049582 Ga0501048_0016673 Ga0501048_0016673_387_1790 382
76 3300049584 Ga0501068_0017513 Ga0501068_0017513_387_1790 382
77 3300049585 Ga0501069_0011952 Ga0501069_0011952_57_1460 382
78 3300049590 Ga0501074_0024179 Ga0501074_0024179_177_1580 382
79 3300049593 Ga0501077_0019158 Ga0501077_0019158_1691_3094 382
80 3300049744 Ga0501083_0054009 Ga0501083_0054009_41_1444 382
81 3300049822 Ga0501035_0012047 Ga0501035_0012047_4932_6335 382
82 3300049823 Ga0501044_0017793 Ga0501044_0017793_3076_4479 382
83 3300049824 Ga0501045_0018410 Ga0501045_0018410_2836_4239 382
84 3300061734 Ga0530510_0095247 Ga0530510_0095247_730_2133 382
85 3300037471 Ga0395905_0238718 Ga0395905_0238718_139_1569 386
86 3300038443 Ga0395901_0118692 Ga0395901_0118692_1049_2479 386
87 3300021384 Ga0213876_10038707 Ga0213876_100387072 388
88 3300038443 Ga0395901_0008181 Ga0395901_0008181_9174_10532 388
89 3300039437 Ga0436365_1280961 Ga0436365_1280961_1162_2574 388
90 3300009147 Ga0114129_10005740 Ga0114129_1000574011 391
91 3300047471 Ga0495684_0083609 Ga0495684_0083609_13_1239 393
92 3300049593 Ga0501077_0042519 Ga0501077_0042519_298_1746 393
93 3300009545 Ga0105237_10035736 Ga0105237_100357362 395
94 3300025913 Ga0207695_10276156 Ga0207695_102761561 395
95 3300039450 Ga0436363_0391826 Ga0436363_0391826_452_1864 396
96 3300044735 Ga0466968_0012472 Ga0466968_0012472_1937_3316 398
97 3300045976 Ga0466967_0020227 Ga0466967_0020227_1156_2508 399
98 3300005329 Ga0070683_100011440 Ga0070683_1000114404 402
99 3300005535 Ga0070684_100030706 Ga0070684_1000307063 402
100 3300009098 Ga0105245_10063869 Ga0105245_100638693 402
101 3300048912 Ga0496109_0209621 Ga0496109_0209621_238_1533 402
102 3300048917 Ga0496114_0040785 Ga0496114_0040785_2136_3593 404
103 3300006175 Ga0070712_100018254 Ga0070712_1000182545 405
104 3300025915 Ga0207693_10016373 Ga0207693_100163735 405
105 3300037418 Ga0395900_0005251 Ga0395900_0005251_4474_5817 406
106 3300037418 Ga0395900_0030593 Ga0395900_0030593_1644_3041 408
107 3300044694 Ga0466963_0044659 Ga0466963_0044659_937_2391 409
108 3300020070 Ga0206356_10446391 Ga0206356_104463912 410
109 3300050491 nmdc:mga00v17_83580_c2 nmdc:mga00v17_83580_c2_17_1249 410
110 3300031901 Ga0307406_10011666 Ga0307406_100116664 411
111 3300031995 Ga0307409_100012380 Ga0307409_1000123804 411
112 3300032002 Ga0307416_100000650 Ga0307416_1000006504 411
113 3300032126 Ga0307415_100000143 Ga0307415_10000014330 411
114 3300037312 Ga0395899_0002355 Ga0395899_0002355_3129_4532 411
115 3300037418 Ga0395900_0009788 Ga0395900_0009788_6863_8266 411
116 3300037466 Ga0395898_0024241 Ga0395898_0024241_1784_3187 411
117 3300038443 Ga0395901_0009462 Ga0395901_0009462_1694_3097 411
118 3300005329 Ga0070683_100077335 Ga0070683_1000773352 412
119 3300005336 Ga0070680_100042454 Ga0070680_1000424542 412
120 3300005339 Ga0070660_100018066 Ga0070660_1000180662 412
121 3300005344 Ga0070661_100012483 Ga0070661_1000124837 412
122 3300005366 Ga0070659_100008022 Ga0070659_1000080226 412
123 3300005436 Ga0070713_100066870 Ga0070713_1000668702 412
124 3300005530 Ga0070679_100045461 Ga0070679_1000454613 412
125 3300005535 Ga0070684_100022350 Ga0070684_1000223503 412
126 3300005548 Ga0070665_100040162 Ga0070665_1000401625 412
127 3300005563 Ga0068855_100029020 Ga0068855_1000290203 412
128 3300005577 Ga0068857_100020606 Ga0068857_1000206066 412
129 3300005616 Ga0068852_100046532 Ga0068852_1000465322 412
130 3300006847 Ga0075431_100191351 Ga0075431_1001913512 412
131 3300006852 Ga0075433_10039166 Ga0075433_100391663 412
132 3300006871 Ga0075434_100071853 Ga0075434_1000718532 412
133 3300006914 Ga0075436_100002185 Ga0075436_1000021852 412
134 3300007076 Ga0075435_100016451 Ga0075435_1000164513 412
135 3300009147 Ga0114129_10006422 Ga0114129_100064224 412
136 3300009551 Ga0105238_10017426 Ga0105238_100174265 412
137 3300013105 Ga0157369_10004705 Ga0157369_1000470511 412
138 3300013296 Ga0157374_10063824 Ga0157374_100638242 412
139 3300013307 Ga0157372_10059682 Ga0157372_100596823 412
140 3300025909 Ga0207705_10023028 Ga0207705_100230282 412
141 3300025912 Ga0207707_10047023 Ga0207707_100470233 412
142 3300025917 Ga0207660_10046979 Ga0207660_100469792 412
143 3300025919 Ga0207657_10006302 Ga0207657_100063024 412
144 3300025921 Ga0207652_10046412 Ga0207652_100464122 412
145 3300025924 Ga0207694_10117477 Ga0207694_101174772 412
146 3300025932 Ga0207690_10049069 Ga0207690_100490692 412
147 3300026116 Ga0207674_10021875 Ga0207674_100218756 412
148 3300028379 Ga0268266_10067736 Ga0268266_100677362 412
149 3300037418 Ga0395900_0145944 Ga0395900_0145944_183_1652 412
150 3300050513 nmdc:mga0rr50_22074_c1 nmdc:mga0rr50_22074_c1_2584_4032 412
151 3300044684 Ga0466966_0033815 Ga0466966_0033815_1083_2510 413
152 3300044719 Ga0466971_0024230 Ga0466971_0024230_515_1942 413
153 3300045049 Ga0466959_0026430 Ga0466959_0026430_145_1572 413
154 3300045836 Ga0466958_0003479 Ga0466958_0003479_1713_3140 413
155 3300046473 Ga0495582_0013234 Ga0495582_0013234_1798_3201 413
156 3300046475 Ga0495639_0028719 Ga0495639_0028719_276_1679 413
157 3300046690 Ga0495624_0027408 Ga0495624_0027408_152_1555 413
158 3300047315 Ga0495581_0000299 Ga0495581_0000299_10222_11625 413
159 3300047321 Ga0495676_0011923 Ga0495676_0011923_4676_6079 413
160 3300006038 Ga0075365_10028469 Ga0075365_100284693 414
161 3300006051 Ga0075364_10105600 Ga0075364_101056002 414
162 3300048929 Ga0496126_0041457 Ga0496126_0041457_1200_2597 414
163 3300050507 nmdc:mga05p37_215102_c1 nmdc:mga05p37_215102_c1_289_1692 415
164 3300005981 Ga0081538_10007203 Ga0081538_100072039 416
165 3300005339 Ga0070660_100001169 Ga0070660_1000011695 417
166 3300005458 Ga0070681_10006197 Ga0070681_100061976 417
167 3300005546 Ga0070696_100028731 Ga0070696_1000287311 417
168 3300005563 Ga0068855_100042795 Ga0068855_1000427953 417
169 3300005981 Ga0081538_10000254 Ga0081538_1000025463 417
170 3300025919 Ga0207657_10002139 Ga0207657_1000213918 417
171 3300025921 Ga0207652_10005789 Ga0207652_100057892 417
172 3300005336 Ga0070680_100088541 Ga0070680_1000885412 418
173 3300005458 Ga0070681_10058451 Ga0070681_100584514 418
174 3300005471 Ga0070698_100025945 Ga0070698_1000259454 418
175 3300020082 Ga0206353_10581558 Ga0206353_105815586 418
176 3300037466 Ga0395898_0135167 Ga0395898_0135167_144_1541 418
177 3300005471 Ga0070698_100065202 Ga0070698_1000652021 419
178 3300007076 Ga0075435_100066150 Ga0075435_1000661502 420
179 3300020082 Ga0206353_12044900 Ga0206353_120449002 420
180 3300005337 Ga0070682_100016746 Ga0070682_1000167463 422
181 3300048904 Ga0496101_0153155 Ga0496101_0153155_246_1628 422
182 3300005435 Ga0070714_100106599 Ga0070714_1001065991 424
183 3300005458 Ga0070681_10049065 Ga0070681_100490652 424
184 3300005530 Ga0070679_100038491 Ga0070679_1000384912 424
185 3300009545 Ga0105237_10041208 Ga0105237_100412084 424
186 3300013105 Ga0157369_10008710 Ga0157369_1000871014 424
187 3300013307 Ga0157372_10027220 Ga0157372_100272204 424
188 3300020070 Ga0206356_11546394 Ga0206356_115463943 424
189 3300025912 Ga0207707_10181880 Ga0207707_101818802 424
190 3300025919 Ga0207657_10024709 Ga0207657_100247093 424
191 3300025919 Ga0207657_10064179 Ga0207657_100641791 424
192 3300025949 Ga0207667_10143067 Ga0207667_101430672 424
193 3300037312 Ga0395899_0020189 Ga0395899_0020189_3059_4474 424
194 3300037466 Ga0395898_0080677 Ga0395898_0080677_181_1596 424
195 3300038443 Ga0395901_0103167 Ga0395901_0103167_181_1596 424
196 3300044694 Ga0466963_0066851 Ga0466963_0066851_586_1896 424
197 3300049583 Ga0501067_0001499 Ga0501067_0001499_7397_8812 424
198 3300049585 Ga0501069_0008191 Ga0501069_0008191_1944_3359 424
199 3300061734 Ga0530510_0053738 Ga0530510_0053738_422_1837 424
200 3300037418 Ga0395900_0047666 Ga0395900_0047666_957_2378 425
201 3300046462 Ga0495651_0043392 Ga0495651_0043392_1748_3208 425
202 3300046511 Ga0495608_0009720 Ga0495608_0009720_1152_2612 425
203 3300046536 Ga0495587_0029968 Ga0495587_0029968_175_1515 425
204 3300046679 Ga0495623_0015068 Ga0495623_0015068_2543_4003 425
205 3300046809 Ga0495600_0133407 Ga0495600_0133407_62_1522 425
206 3300047319 Ga0495674_0202785 Ga0495674_0202785_27_1367 425
207 3300048918 Ga0496115_0014546 Ga0496115_0014546_1884_3344 425
208 3300005563 Ga0068855_100040237 Ga0068855_1000402372 426
209 3300013105 Ga0157369_10086138 Ga0157369_100861384 426
210 3300025949 Ga0207667_10034001 Ga0207667_100340012 426
211 3300028563 Ga0265319_1032984 Ga0265319_10329841 426
212 3300028577 Ga0265318_10009468 Ga0265318_100094683 426
213 3300044693 Ga0466961_0001257 Ga0466961_0001257_9618_11018 426
214 3300044694 Ga0466963_0020007 Ga0466963_0020007_1680_3080 426
215 3300044694 Ga0466963_0052508 Ga0466963_0052508_1078_2478 426
216 3300044706 Ga0466964_0007133 Ga0466964_0007133_434_1834 426
217 3300044719 Ga0466971_0004595 Ga0466971_0004595_3625_5025 426
218 3300044842 Ga0466957_0009762 Ga0466957_0009762_3170_4570 426
219 3300045836 Ga0466958_0000213 Ga0466958_0000213_18588_19988 426
220 3300045976 Ga0466967_0009219 Ga0466967_0009219_2966_4366 426
221 3300061719 Ga0466962_0001074 Ga0466962_0001074_4639_6039 426
222 3300005329 Ga0070683_100026830 Ga0070683_1000268302 427
223 3300005339 Ga0070660_100160712 Ga0070660_1001607121 427
224 3300005436 Ga0070713_100216504 Ga0070713_1002165041 427
225 3300005535 Ga0070684_100026405 Ga0070684_1000264054 427
226 3300005547 Ga0070693_100009714 Ga0070693_1000097144 427
227 3300005614 Ga0068856_100197141 Ga0068856_1001971412 427
228 3300005840 Ga0068870_10015789 Ga0068870_100157893 427
229 3300005985 Ga0081539_10010009 Ga0081539_100100096 427
230 3300013105 Ga0157369_10004612 Ga0157369_100046129 427
231 3300037312 Ga0395899_0006657 Ga0395899_0006657_4092_5462 427
232 3300037418 Ga0395900_0106909 Ga0395900_0106909_1244_2614 427
233 3300037418 Ga0395900_0108851 Ga0395900_0108851_294_1697 427
234 3300037418 Ga0395900_0163546 Ga0395900_0163546_48_1445 427
235 3300037466 Ga0395898_0008026 Ga0395898_0008026_2468_3838 427
236 3300037466 Ga0395898_0149983 Ga0395898_0149983_645_2048 427
237 3300037471 Ga0395905_0008558 Ga0395905_0008558_8027_9397 427
238 3300037471 Ga0395905_0160495 Ga0395905_0160495_660_2063 427
239 3300044694 Ga0466963_0003290 Ga0466963_0003290_7028_8473 427
240 3300045836 Ga0466958_0020396 Ga0466958_0020396_1118_2563 427
241 3300046531 Ga0495665_0043582 Ga0495665_0043582_59_1462 427
242 3300048904 Ga0496101_0054725 Ga0496101_0054725_84_1535 427
243 3300048904 Ga0496101_0090045 Ga0496101_0090045_115_1497 427
244 3300048905 Ga0496102_0006043 Ga0496102_0006043_3577_5025 427
245 3300048905 Ga0496102_0108039 Ga0496102_0108039_1018_2400 427
246 3300048905 Ga0496102_0127900 Ga0496102_0127900_390_1841 427
247 3300048906 Ga0496103_0022654 Ga0496103_0022654_2279_3661 427
248 3300048907 Ga0496104_0004539 Ga0496104_0004539_9119_10570 427
249 3300048908 Ga0496105_0029171 Ga0496105_0029171_2694_4145 427
250 3300048910 Ga0496107_0049863 Ga0496107_0049863_269_1651 427
251 3300048911 Ga0496108_0001639 Ga0496108_0001639_1809_3260 427
252 3300048912 Ga0496109_0006478 Ga0496109_0006478_3469_4920 427
253 3300048913 Ga0496110_0003327 Ga0496110_0003327_6079_7461 427
254 3300048913 Ga0496110_0008922 Ga0496110_0008922_835_2286 427
255 3300048914 Ga0496111_0033452 Ga0496111_0033452_2016_3398 427
256 3300048914 Ga0496111_0049678 Ga0496111_0049678_670_2076 427
257 3300048914 Ga0496111_0053140 Ga0496111_0053140_902_2353 427
258 3300048915 Ga0496112_0020668 Ga0496112_0020668_1025_2476 427
259 3300048915 Ga0496112_0039362 Ga0496112_0039362_1426_2898 427
260 3300048916 Ga0496113_0026874 Ga0496113_0026874_2572_4023 427
261 3300048917 Ga0496114_0013664 Ga0496114_0013664_373_1824 427
262 3300049577 Ga0501041_0121704 Ga0501041_0121704_29_1411 427
263 3300049582 Ga0501048_0045911 Ga0501048_0045911_22_1404 427
264 3300049741 Ga0501079_0131785 Ga0501079_0131785_270_1652 427
265 3300049742 Ga0501080_0073863 Ga0501080_0073863_754_2199 427
266 3300049743 Ga0501081_0008341 Ga0501081_0008341_1491_2873 427
267 3300060353 Ga0501082_0137587 Ga0501082_0137587_458_1840 427
268 3300003373 JGI25407J50210_10000435 JGI25407J50210_100004352 428

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13487

HD_5

HD domain

292

459

0.96

PF01966

HD

HD domain

305

428

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
4r8z-assembly1.cif.gz_B crystal structure of pa4781 hd-gyp domain from pseudomonas aeruginosa at 2.2a resolution showing a bi-metallic ni ion center 0.8691 231 418
4mdz-assembly1.cif.gz_A crystal structure of a hd-gyp domain (a cyclic-di-gmp phosphodiesterase) containing a tri-nuclear metal centre 0.7729 188 421
4r8z-assembly1.cif.gz_B crystal structure of pa4781 hd-gyp domain from pseudomonas aeruginosa at 2.2a resolution showing a bi-metallic ni ion center 0.758 231 418
4s1b-assembly3.cif.gz_A crystal structure of l. monocytogenes phosphodiesterase pgph hd domain in complex with cyclic-di-amp 0.7099 243 425
4s1c-assembly3.cif.gz_A crystal structure of l. monocytogenes phosphodiesterase pgph hd domain 0.6918 244 420
ID Description Score Start End Superfamily
4r8zB00 Mainly Alpha;Orthogonal Bundle;Hypothetical protein af1432;Hypothetical protein af1432 0.8691 231 418 1.10.3210.10
4me4A02 Mainly Alpha;Orthogonal Bundle;Hypothetical protein af1432;Hypothetical protein af1432 0.8628 243 421 1.10.3210.10
4me4A02 Mainly Alpha;Orthogonal Bundle;Hypothetical protein af1432;Hypothetical protein af1432 0.8015 243 421 1.10.3210.10
4r8zB00 Mainly Alpha;Orthogonal Bundle;Hypothetical protein af1432;Hypothetical protein af1432 0.758 231 418 1.10.3210.10
3tm8B00 Mainly Alpha;Orthogonal Bundle;Hypothetical protein af1432;Hypothetical protein af1432 0.6616 199 417 1.10.3210.10
ID Description Score Start End GO Terms
AF-A0A660RLT3-F1-model_v4 HD-GYP domain-containing protein 0.9735 242 420
AF-A0A7C0X846-F1-model_v4 HD-GYP domain-containing protein 0.9683 241 425
AF-A0A1I2C029-F1-model_v4 deleted 0.9653 254 416
AF-A0A023X1N6-F1-model_v4 HD domain 0.9651 237 417 GO:0016020
GO:0016787
AF-A0A2S8SXI7-F1-model_v4 HD domain-containing protein 0.9631 236 417 GO:0016787

Feature Viewer

pLDDT pTM Quality
81.48 0.52 Medium
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Predicted Structure (AlphaFold2)

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