F375723

General Info

Members Datasets Scaffolds Average Seq Length
268 191 536 461

Family's Representative Sequence

Representative Sequence 3300046492|Ga0495585_0000604|Ga0495585_0000604_3458_4972
Length 504
Sequence MPLYTKNNNKFTQPIAFRPFFLFWIMYNPLNICLMNKDVISFLSAAALMCTATIASAQKTTAASLWLTKADRSALFARQKEAPEFKTGGKSNDITIKVDDKQTYQPIDGFGFALTGGSATHIIRMNADSRAALLKNLFAVNDNNIGVSYLRLSIGASDLNEKVFSYDDMPAGQTDPTLKHFDLGPDKQDVIPVMKQILAINPSIKILGSPWSPPAWMKTNNDTRGGRLKPEYWGTYAKYLVKYIQGMKAQGINIDAITVQNEPLHPGNNPSLLLVAPDESAFIKNNLGPAFKAAGIKTKIILYDHNCDRPDYPISILNDKAAAKYIDGSGFHLYGGDISALSTVHYAHPEKNVYFTEQMVVEPENESTIDMRWPLKHLIIGATRNWSRNVLEWNLAADQDYKPYTDRGGCPSCQGAVTINKNEVKKNVAYYTIAHASKFVRPGSVRIASNNLDKLPNVAFKTPDGKKVLIVANTSDAAQDFDISYAGKTLAAHLDKGSVGTYTW

Samples

Sample ID Description Type Environment
1 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
4 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
5 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
6 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
7 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
8 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
9 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
10 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
11 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
12 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
13 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
14 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
15 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
16 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
17 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
18 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
19 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
20 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
21 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
22 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
23 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
24 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
25 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
26 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
27 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
28 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
29 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
30 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
31 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
32 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
33 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
34 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
35 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
36 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
37 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
38 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
39 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
40 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
41 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
42 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
43 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
44 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
45 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
46 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
47 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
48 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
49 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
50 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
51 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
52 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
53 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
54 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
55 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
56 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
57 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
58 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
59 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
60 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
61 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
62 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
63 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
64 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
65 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
66 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
67 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
68 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
69 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
70 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
71 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
72 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
73 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
74 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
75 3300015682 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A01 Metagenome Rhizosphere
76 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
77 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
78 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
79 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
80 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
81 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
82 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
83 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
84 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
85 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
86 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
87 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
88 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
114 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
115 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
116 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
117 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
118 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
119 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
120 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
121 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
122 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
123 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
124 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
125 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
126 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
127 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
128 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
129 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
130 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
131 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
132 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
133 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
134 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
135 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
136 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
137 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
138 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
139 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
140 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
141 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
142 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
143 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
144 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
145 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
146 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
147 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
148 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
149 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
150 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
151 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
152 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
153 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
154 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
155 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
156 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
157 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
158 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
159 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
160 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
161 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
162 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
163 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
164 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
165 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
166 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
167 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
168 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
169 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
170 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
171 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
172 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
173 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
174 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
175 2738541302 Pedobacter sp. CF074 Isolate Unclassified
176 2739367651 Pedobacter sp. OK291 Isolate Unclassified
177 2818991437 Pedobacter terrae 518 Isolate Unclassified
178 2818991442 Chitinophaga pinensis 1204 Isolate Unclassified
179 2821136567 Chitinophaga sancti 1232 Isolate Unclassified
180 2842722452 Pedobacter sp. R-72249 Isolate Unclassified
181 2842909656 Pedobacter sp. R-72393 Isolate Unclassified
182 2849281842 Pedobacter sp. AK013 Isolate Rhizosphere
183 2904445276 Pedobacter terrae 1734 Isolate Rhizosphere
184 2904467357 Chitinophaga sancti 3198 Isolate Unclassified
185 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
186 2919509842 Flavobacterium arsenatis 3773 Isolate Unclassified
187 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
188 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
189 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
190 2945997725 Pedobacter sp. W3I1 Isolate Rhizosphere
191 2954016120 Flavobacterium sp. W4I14 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.28
Metatranscriptomes 0
Isolates 6.72

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 13.81
Nodule 0
Rhizoplane 0.75
Rhizosphere 77.24
Stem 0
Stem Tuber 0
Unclassified 3.73

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495585_0000604 3300046492 Bacteria 33594
2 SwRhRL2b_contig_1362274 2162886007 Bacteria 12894
3 JGI24737J22298_10000150 3300001990 Bacteria 21826
4 JGI24735J21928_10000024 3300002067 Bacteria 95227
5 JGI24751J29686_10001251 3300002459 Bacteria 5370
6 JGI25162J39368_1000056 3300002737 Bacteria 146755
7 JGI25162J39368_1001673 3300002737 Bacteria 10892
8 JGI25164J39214_1002348 3300002772 Unclassified 2985
9 JGI25152J39213_1000634 3300002773 Bacteria 18602
10 JGI25150J39212_1000003 3300002774 Bacteria 508651
11 JGI25151J46595_10000002 3300003187 Bacteria 731381
12 JGI25165J46597_1007975 3300003214 Unclassified 1704
13 JGI25153J46596_10000564 3300003215 Bacteria 22949
14 rootH1_10013388 3300003316 Bacteria 8545
15 rootH1_10002605 3300003323 Bacteria 51064
16 rootH1_10110201 3300003323 Bacteria 3465
17 Ga0055536_1000004 3300003781 Bacteria 411108
18 Ga0055530_10001414 3300003791 Bacteria 17629
19 Ga0055531_10000066 3300003794 Bacteria 115693
20 Ga0065165_1003757 3300005262 Bacteria 10205
21 Ga0065714_10002308 3300005288 Bacteria 25867
22 Ga0065714_10002717 3300005288 Bacteria 15594
23 Ga0065714_10009098 3300005288 Bacteria 3349
24 Ga0065714_10065704 3300005288 Bacteria 8799
25 Ga0065714_10084245 3300005288 Bacteria 2205
26 Ga0065704_10000196 3300005289 Bacteria 186428
27 Ga0065704_10121458 3300005289 Unclassified 1765
28 Ga0065712_10110541 3300005290 Bacteria 1834
29 Ga0070676_10023649 3300005328 Bacteria 3455
30 Ga0070683_100005596 3300005329 Bacteria 10494
31 Ga0070683_100070024 3300005329 Bacteria 3272
32 Ga0070690_100003084 3300005330 Bacteria 9062
33 Ga0070670_100009280 3300005331 Bacteria 8402
34 Ga0070670_100015677 3300005331 Bacteria 6506
35 Ga0068869_100004654 3300005334 Bacteria 8559
36 Ga0068869_100015300 3300005334 Bacteria 5143
37 Ga0068869_100133758 3300005334 Bacteria 1909
38 Ga0070666_10005746 3300005335 Bacteria 7619
39 Ga0070661_100000521 3300005344 Bacteria 29488
40 Ga0070675_100099832 3300005354 Bacteria 2444
41 Ga0070671_100004285 3300005355 Bacteria 11287
42 Ga0070671_100195065 3300005355 Bacteria 1717
43 Ga0070673_100068097 3300005364 Bacteria 2849
44 Ga0070688_100051694 3300005365 Bacteria 2565
45 Ga0070667_100160160 3300005367 Bacteria 1982
46 Ga0070667_100210914 3300005367 Bacteria 1726
47 Ga0070662_100005116 3300005457 Bacteria 8360
48 Ga0070685_10033651 3300005466 Bacteria 2881
49 Ga0070698_100006488 3300005471 Bacteria 12691
50 Ga0070698_100009143 3300005471 Bacteria 10635
51 Ga0070684_100001055 3300005535 Bacteria 19689
52 Ga0070684_100147111 3300005535 Bacteria 2133
53 Ga0068853_100089208 3300005539 Bacteria 2708
54 Ga0070665_100000031 3300005548 Bacteria 333365
55 Ga0070704_100043981 3300005549 Bacteria 3100
56 Ga0068855_100038365 3300005563 Bacteria 5692
57 Ga0070664_100080706 3300005564 Bacteria 2802
58 Ga0068857_100016176 3300005577 Bacteria 6532
59 Ga0068856_100164806 3300005614 Bacteria 2227
60 Ga0068859_100010359 3300005617 Bacteria 9379
61 Ga0068859_100033672 3300005617 Bacteria 5144
62 Ga0068859_100198328 3300005617 Unclassified 2091
63 Ga0068864_100067471 3300005618 Bacteria 3106
64 Ga0068870_10017169 3300005840 Bacteria 3473
65 Ga0068863_100210823 3300005841 Bacteria 1871
66 Ga0075366_10000174 3300006195 Bacteria 27797
67 Ga0075366_10054500 3300006195 Bacteria 2375
68 Ga0068871_100004751 3300006358 Bacteria 9495
69 Ga0068871_100055855 3300006358 Bacteria 3207
70 Ga0068865_100103458 3300006881 Bacteria 2089
71 Ga0097620_100010359 3300006931 Bacteria 9379
72 Ga0097620_100033671 3300006931 Bacteria 5144
73 Ga0097620_100198329 3300006931 Unclassified 2091
74 Ga0105244_10026710 3300009036 Bacteria 3121
75 Ga0105240_10049676 3300009093 Bacteria 5293
76 Ga0105240_10118966 3300009093 Bacteria 3183
77 Ga0111539_10042669 3300009094 Bacteria 5444
78 Ga0105242_10106306 3300009176 Bacteria 2385
79 Ga0105237_10002759 3300009545 Bacteria 21348
80 Ga0105237_10008016 3300009545 Bacteria 11495
81 Ga0105237_10010390 3300009545 Bacteria 9909
82 Ga0105237_10024868 3300009545 Bacteria 6127
83 Ga0105249_10000984 3300009553 Bacteria 25247
84 Ga0105239_10000021 3300010375 Bacteria 259369
85 Ga0105239_10000355 3300010375 Bacteria 67024
86 Ga0105239_10001782 3300010375 Bacteria 28318
87 Ga0105239_10008850 3300010375 Bacteria 11398
88 Ga0157373_10000133 3300013100 Bacteria 58747
89 Ga0157373_10022771 3300013100 Bacteria 4544
90 Ga0157371_10000806 3300013102 Bacteria 35978
91 Ga0157371_10002821 3300013102 Bacteria 16258
92 Ga0157371_10060251 3300013102 Bacteria 2691
93 Ga0157370_10042743 3300013104 Bacteria 4365
94 Ga0157370_10117474 3300013104 Bacteria 2484
95 Ga0157369_10000023 3300013105 Bacteria 226955
96 Ga0157369_10046975 3300013105 Bacteria 4689
97 Ga0157374_10003693 3300013296 Bacteria 12869
98 Ga0157378_10040834 3300013297 Bacteria 4115
99 Ga0163162_10000036 3300013306 Bacteria 144093
100 Ga0163162_10001312 3300013306 Bacteria 23236
101 Ga0163162_10001345 3300013306 Bacteria 22882
102 Ga0163162_10001661 3300013306 Bacteria 20854
103 Ga0163162_10011094 3300013306 Bacteria 8777
104 Ga0157372_10002016 3300013307 Bacteria 22086
105 Ga0157375_10071860 3300013308 Bacteria 3475
106 Ga0157375_10196757 3300013308 Bacteria 2171
107 Ga0182008_10000779 3300014497 Bacteria 22293
108 Ga0157377_10021709 3300014745 Bacteria 3381
109 Ga0157379_10049229 3300014968 Bacteria 3762
110 Ga0157379_10069781 3300014968 Bacteria 3144
111 Ga0157376_10061815 3300014969 Bacteria 3149
112 Ga0182006_1005550 3300015261 Bacteria 5994
113 Ga0182005_1000103 3300015265 Bacteria 64268
114 Ga0183373_1004 3300015682 Bacteria 537398
115 Ga0163161_10006522 3300017792 Bacteria 8080
116 Ga0163161_10006952 3300017792 Bacteria 7821
117 Ga0207427_100106 3300025231 Bacteria 117041
118 Ga0209437_100124 3300025233 Bacteria 199789
119 Ga0209437_100226 3300025233 Bacteria 100303
120 Ga0207425_1000003 3300025245 Bacteria 1145342
121 Ga0209129_1000014 3300025258 Bacteria 509018
122 Ga0209233_1000089 3300025261 Bacteria 316381
123 Ga0209455_1005612 3300025272 Bacteria 3841
124 Ga0209676_1000009 3300025292 Bacteria 981719
125 Ga0209025_1000007 3300025294 Bacteria 1145109
126 Ga0209758_1000012 3300025297 Bacteria 949866
127 Ga0209050_1000048 3300025298 Bacteria 371553
128 Ga0207426_1004034 3300025302 Bacteria 7437
129 Ga0207645_10058757 3300025907 Bacteria 2455
130 Ga0207643_10001378 3300025908 Bacteria 13994
131 Ga0207695_10064681 3300025913 Bacteria 3764
132 Ga0207671_10002129 3300025914 Bacteria 21612
133 Ga0207671_10010331 3300025914 Bacteria 7711
134 Ga0207671_10015012 3300025914 Bacteria 6089
135 Ga0207671_10032336 3300025914 Bacteria 3895
136 Ga0207671_10053904 3300025914 Bacteria 2980
137 Ga0207649_10004109 3300025920 Bacteria 7920
138 Ga0207650_10017598 3300025925 Bacteria 5006
139 Ga0207659_10114102 3300025926 Bacteria 2059
140 Ga0207706_10001693 3300025933 Bacteria 21746
141 Ga0207669_10038120 3300025937 Bacteria 2765
142 Ga0207704_10077354 3300025938 Bacteria 2135
143 Ga0207689_10013102 3300025942 Bacteria 7079
144 Ga0207661_10002647 3300025944 Bacteria 12320
145 Ga0207661_10009537 3300025944 Bacteria 6969
146 Ga0207651_10025741 3300025960 Bacteria 3662
147 Ga0207651_10036698 3300025960 Bacteria 3203
148 Ga0207651_10081221 3300025960 Bacteria 2336
149 Ga0207712_10002534 3300025961 Bacteria 11744
150 Ga0207677_10014903 3300026023 Bacteria 4554
151 Ga0207703_10052586 3300026035 Bacteria 3308
152 Ga0207639_10007300 3300026041 Bacteria 7528
153 Ga0207641_10140175 3300026088 Unclassified 2181
154 Ga0207648_10010763 3300026089 Bacteria 8642
155 Ga0207676_10070351 3300026095 Bacteria 2806
156 Ga0207676_10076411 3300026095 Bacteria 2706
157 Ga0207676_10161311 3300026095 Unclassified 1943
158 Ga0207674_10014698 3300026116 Bacteria 8632
159 Ga0207674_10152717 3300026116 Bacteria 2266
160 Ga0207675_100197120 3300026118 Bacteria 1933
161 Ga0207683_10001848 3300026121 Bacteria 18723
162 Ga0207698_10159472 3300026142 Bacteria 1971
163 Ga0268265_10065404 3300028380 Bacteria 2806
164 Ga0307517_10015597 3300028786 Bacteria 10079
165 Ga0307515_10000001 3300028794 Bacteria 4259510
166 Ga0307515_10000074 3300028794 Bacteria 229874
167 Ga0307515_10002585 3300028794 Bacteria 39041
168 Ga0307515_10005522 3300028794 Bacteria 25593
169 Ga0265327_10003962 3300031251 Bacteria 13526
170 Ga0307509_10025120 3300031507 Bacteria 6658
171 Ga0307508_10000992 3300031616 Bacteria 32986
172 Ga0307407_10000012 3300031903 Bacteria 172479
173 Ga0307412_10000004 3300031911 Bacteria 544053
174 Ga0307409_100061854 3300031995 Bacteria 2928
175 Ga0307416_100000024 3300032002 Bacteria 186924
176 Ga0307414_10000259 3300032004 Bacteria 33318
177 Ga0307414_10006952 3300032004 Bacteria 6340
178 Ga0307507_10000097 3300033179 Bacteria 139761
179 Ga0373937_0042154 3300036401 Unclassified 4164
180 Ga0451807_1950528 3300041486 Bacteria 1658
181 Ga0451577_0000010 3300042876 Bacteria 616686
182 Ga0466972_0000051 3300044658 Bacteria 114011
183 Ga0453684_0000130 3300044712 Bacteria 331761
184 Ga0466970_0000446 3300044765 Bacteria 20265
185 Ga0451576_0000353 3300045051 Bacteria 110215
186 Ga0495592_0213973 3300046454 Bacteria 1293
187 Ga0495638_0113914 3300046460 Bacteria 1604
188 Ga0495650_0000095 3300046471 Bacteria 218020
189 Ga0495585_0000034 3300046492 Bacteria 143120
190 Ga0495606_0000009 3300046507 Bacteria 306313
191 Ga0495606_0011003 3300046507 Bacteria 7432
192 Ga0495606_0014033 3300046507 Bacteria 6280
193 Ga0495606_0095438 3300046507 Unclassified 1821
194 Ga0495610_0000188 3300046512 Bacteria 69214
195 Ga0495610_0001196 3300046512 Bacteria 23476
196 Ga0495610_0066201 3300046512 Bacteria 1702
197 Ga0495616_0001155 3300046513 Bacteria 18668
198 Ga0495616_0003783 3300046513 Bacteria 9650
199 Ga0495628_0025438 3300046516 Bacteria 4836
200 Ga0495630_0015501 3300046517 Bacteria 5566
201 Ga0495637_0049234 3300046520 Bacteria 1771
202 Ga0495643_0021447 3300046522 Bacteria 3706
203 Ga0495648_0001773 3300046524 Bacteria 20805
204 Ga0495648_0001819 3300046524 Bacteria 20533
205 Ga0495652_0146380 3300046529 Unclassified 1851
206 Ga0495587_0068048 3300046536 Bacteria 2075
207 Ga0495609_0008426 3300046538 Bacteria 5051
208 Ga0495645_0056915 3300046543 Bacteria 2839
209 Ga0495633_0000004 3300046558 Bacteria 370781
210 Ga0495633_0001979 3300046558 Bacteria 14836
211 Ga0495668_0000011 3300046616 Bacteria 472186
212 Ga0495668_0002713 3300046616 Bacteria 14192
213 Ga0495634_0074644 3300046642 Bacteria 2228
214 Ga0495625_0000007 3300046660 Bacteria 565749
215 Ga0495625_0004018 3300046660 Bacteria 14070
216 Ga0495625_0008033 3300046660 Bacteria 9052
217 Ga0495625_0017117 3300046660 Bacteria 5681
218 Ga0495625_0026743 3300046660 Bacteria 4353
219 Ga0495625_0106498 3300046660 Bacteria 1920
220 Ga0495661_0006878 3300046665 Bacteria 7955
221 Ga0495658_0010906 3300046683 Bacteria 4554
222 Ga0495649_0000007 3300046694 Bacteria 518037
223 Ga0495660_0003234 3300046810 Bacteria 10123
224 Ga0495676_0169460 3300047321 Bacteria 1538
225 Ga0495687_000010 3300047443 Bacteria 413735
226 Ga0495686_0001562 3300047472 Bacteria 24407
227 Ga0495686_0002554 3300047472 Bacteria 16992
228 Ga0495686_0004407 3300047472 Bacteria 11597
229 Ga0495686_0008049 3300047472 Bacteria 7812
230 Ga0495686_0029879 3300047472 Bacteria 3542
231 Ga0495614_0011111 3300048089 Bacteria 3962
232 Ga0501034_0060494 3300049571 Bacteria 3804
233 Ga0501034_0065378 3300049571 Bacteria 3649
234 Ga0501037_0010620 3300049573 Bacteria 6766
235 Ga0501241_000660 3300049758 Bacteria 7419
236 Ga0501241_000992 3300049758 Bacteria 5973
237 Ga0501035_0052845 3300049822 Bacteria 3635
238 Ga0501044_0063875 3300049823 Bacteria 3759
239 nmdc:mga0k408_123_c1 3300050493 Bacteria 38185
240 nmdc:mga0k408_6548_c1 3300050493 Bacteria 2433
241 nmdc:mga06r32_74267_c1 3300050510 Bacteria 3296
242 Ga0500635_0000256 3300053080 Bacteria 21771
243 Ga0500583_0008864 3300053092 Bacteria 3644
244 Ga0500641_0000077 3300053096 Bacteria 40051
245 Ga0500562_000040 3300053108 Bacteria 69393
246 Ga0500608_001440 3300053122 Bacteria 8514
247 Ga0500618_000251 3300053125 Bacteria 42567
248 Ga0500588_0000923 3300053146 Bacteria 5194
249 Ga0500624_000904 3300053157 Bacteria 6279
250 Ga0500645_032085 3300053730 Bacteria 1576
251 2599480780 2599185184 Bacteria 6430550
252 2738854335 2738541302 Bacteria 5944758
253 2739587873 2739367651 Bacteria 6359826
254 2819545761 2818991437 Bacteria 5805520
255 2819572331 2818991442 Bacteria 8318214
256 2821140296 2821136567 Bacteria 8080116
257 2842724349 2842722452 Bacteria 6263924
258 2842913516 2842909656 Bacteria 6185908
259 2849284963 2849281842 Bacteria 6065644
260 2904448430 2904445276 Bacteria 5310396
261 2904472421 2904467357 Bacteria 8057758
262 2919439926 2919437846 Bacteria 6199444
263 2919510682 2919509842 Bacteria 4104664
264 2928081674 2928078545 Bacteria 6534839
265 2928150298 2928147474 Bacteria 6512076
266 2932085120 2932082852 Bacteria 6563563
267 2945998812 2945997725 Bacteria 6404843
268 2954021262 2954016120 Bacteria 6446024
269 Ga0495585_0000604
270 SwRhRL2b_contig_1362274
271 JGI24737J22298_10000150
272 JGI24735J21928_10000024
273 JGI24751J29686_10001251
274 JGI25162J39368_1000056
275 JGI25162J39368_1001673
276 JGI25164J39214_1002348
277 JGI25152J39213_1000634
278 JGI25150J39212_1000003
279 JGI25151J46595_10000002
280 JGI25165J46597_1007975
281 JGI25153J46596_10000564
282 rootH1_10013388
283 rootH1_10002605
284 rootH1_10110201
285 Ga0055536_1000004
286 Ga0055530_10001414
287 Ga0055531_10000066
288 Ga0065165_1003757
289 Ga0065714_10002308
290 Ga0065714_10002717
291 Ga0065714_10009098
292 Ga0065714_10065704
293 Ga0065714_10084245
294 Ga0065704_10000196
295 Ga0065704_10121458
296 Ga0065712_10110541
297 Ga0070676_10023649
298 Ga0070683_100005596
299 Ga0070683_100070024
300 Ga0070690_100003084
301 Ga0070670_100009280
302 Ga0070670_100015677
303 Ga0068869_100004654
304 Ga0068869_100015300
305 Ga0068869_100133758
306 Ga0070666_10005746
307 Ga0070661_100000521
308 Ga0070675_100099832
309 Ga0070671_100004285
310 Ga0070671_100195065
311 Ga0070673_100068097
312 Ga0070688_100051694
313 Ga0070667_100160160
314 Ga0070667_100210914
315 Ga0070662_100005116
316 Ga0070685_10033651
317 Ga0070698_100006488
318 Ga0070698_100009143
319 Ga0070684_100001055
320 Ga0070684_100147111
321 Ga0068853_100089208
322 Ga0070665_100000031
323 Ga0070704_100043981
324 Ga0068855_100038365
325 Ga0070664_100080706
326 Ga0068857_100016176
327 Ga0068856_100164806
328 Ga0068859_100010359
329 Ga0068859_100033672
330 Ga0068859_100198328
331 Ga0068864_100067471
332 Ga0068870_10017169
333 Ga0068863_100210823
334 Ga0075366_10000174
335 Ga0075366_10054500
336 Ga0068871_100004751
337 Ga0068871_100055855
338 Ga0068865_100103458
339 Ga0097620_100010359
340 Ga0097620_100033671
341 Ga0097620_100198329
342 Ga0105244_10026710
343 Ga0105240_10049676
344 Ga0105240_10118966
345 Ga0111539_10042669
346 Ga0105242_10106306
347 Ga0105237_10002759
348 Ga0105237_10008016
349 Ga0105237_10010390
350 Ga0105237_10024868
351 Ga0105249_10000984
352 Ga0105239_10000021
353 Ga0105239_10000355
354 Ga0105239_10001782
355 Ga0105239_10008850
356 Ga0157373_10000133
357 Ga0157373_10022771
358 Ga0157371_10000806
359 Ga0157371_10002821
360 Ga0157371_10060251
361 Ga0157370_10042743
362 Ga0157370_10117474
363 Ga0157369_10000023
364 Ga0157369_10046975
365 Ga0157374_10003693
366 Ga0157378_10040834
367 Ga0163162_10000036
368 Ga0163162_10001312
369 Ga0163162_10001345
370 Ga0163162_10001661
371 Ga0163162_10011094
372 Ga0157372_10002016
373 Ga0157375_10071860
374 Ga0157375_10196757
375 Ga0182008_10000779
376 Ga0157377_10021709
377 Ga0157379_10049229
378 Ga0157379_10069781
379 Ga0157376_10061815
380 Ga0182006_1005550
381 Ga0182005_1000103
382 Ga0183373_1004
383 Ga0163161_10006522
384 Ga0163161_10006952
385 Ga0207427_100106
386 Ga0209437_100124
387 Ga0209437_100226
388 Ga0207425_1000003
389 Ga0209129_1000014
390 Ga0209233_1000089
391 Ga0209455_1005612
392 Ga0209676_1000009
393 Ga0209025_1000007
394 Ga0209758_1000012
395 Ga0209050_1000048
396 Ga0207426_1004034
397 Ga0207645_10058757
398 Ga0207643_10001378
399 Ga0207695_10064681
400 Ga0207671_10002129
401 Ga0207671_10010331
402 Ga0207671_10015012
403 Ga0207671_10032336
404 Ga0207671_10053904
405 Ga0207649_10004109
406 Ga0207650_10017598
407 Ga0207659_10114102
408 Ga0207706_10001693
409 Ga0207669_10038120
410 Ga0207704_10077354
411 Ga0207689_10013102
412 Ga0207661_10002647
413 Ga0207661_10009537
414 Ga0207651_10025741
415 Ga0207651_10036698
416 Ga0207651_10081221
417 Ga0207712_10002534
418 Ga0207677_10014903
419 Ga0207703_10052586
420 Ga0207639_10007300
421 Ga0207641_10140175
422 Ga0207648_10010763
423 Ga0207676_10070351
424 Ga0207676_10076411
425 Ga0207676_10161311
426 Ga0207674_10014698
427 Ga0207674_10152717
428 Ga0207675_100197120
429 Ga0207683_10001848
430 Ga0207698_10159472
431 Ga0268265_10065404
432 Ga0307517_10015597
433 Ga0307515_10000001
434 Ga0307515_10000074
435 Ga0307515_10002585
436 Ga0307515_10005522
437 Ga0265327_10003962
438 Ga0307509_10025120
439 Ga0307508_10000992
440 Ga0307407_10000012
441 Ga0307412_10000004
442 Ga0307409_100061854
443 Ga0307416_100000024
444 Ga0307414_10000259
445 Ga0307414_10006952
446 Ga0307507_10000097
447 Ga0373937_0042154
448 Ga0451807_1950528
449 Ga0451577_0000010
450 Ga0466972_0000051
451 Ga0453684_0000130
452 Ga0466970_0000446
453 Ga0451576_0000353
454 Ga0495592_0213973
455 Ga0495638_0113914
456 Ga0495650_0000095
457 Ga0495585_0000034
458 Ga0495606_0000009
459 Ga0495606_0011003
460 Ga0495606_0014033
461 Ga0495606_0095438
462 Ga0495610_0000188
463 Ga0495610_0001196
464 Ga0495610_0066201
465 Ga0495616_0001155
466 Ga0495616_0003783
467 Ga0495628_0025438
468 Ga0495630_0015501
469 Ga0495637_0049234
470 Ga0495643_0021447
471 Ga0495648_0001773
472 Ga0495648_0001819
473 Ga0495652_0146380
474 Ga0495587_0068048
475 Ga0495609_0008426
476 Ga0495645_0056915
477 Ga0495633_0000004
478 Ga0495633_0001979
479 Ga0495668_0000011
480 Ga0495668_0002713
481 Ga0495634_0074644
482 Ga0495625_0000007
483 Ga0495625_0004018
484 Ga0495625_0008033
485 Ga0495625_0017117
486 Ga0495625_0026743
487 Ga0495625_0106498
488 Ga0495661_0006878
489 Ga0495658_0010906
490 Ga0495649_0000007
491 Ga0495660_0003234
492 Ga0495676_0169460
493 Ga0495687_000010
494 Ga0495686_0001562
495 Ga0495686_0002554
496 Ga0495686_0004407
497 Ga0495686_0008049
498 Ga0495686_0029879
499 Ga0495614_0011111
500 Ga0501034_0060494
501 Ga0501034_0065378
502 Ga0501037_0010620
503 Ga0501241_000660
504 Ga0501241_000992
505 Ga0501035_0052845
506 Ga0501044_0063875
507 nmdc:mga0k408_123_c1
508 nmdc:mga0k408_6548_c1
509 nmdc:mga06r32_74267_c1
510 Ga0500635_0000256
511 Ga0500583_0008864
512 Ga0500641_0000077
513 Ga0500562_000040
514 Ga0500608_001440
515 Ga0500618_000251
516 Ga0500588_0000923
517 Ga0500624_000904
518 Ga0500645_032085
519 2599480780
520 2738854335
521 2739587873
522 2819545761
523 2819572331
524 2821140296
525 2842724349
526 2842913516
527 2849284963
528 2904448430
529 2904472421
530 2919439926
531 2919510682
532 2928081674
533 2928150298
534 2932085120
535 2945998812
536 2954021262

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF17189

Glyco_hydro_30C

Glycosyl hydrolase family 30 beta sandwich domain

443

502

0.93

PF02055

Glyco_hydro_30

Glycosyl hydrolase family 30 TIM-barrel domain

107

440

0.89

PF02057

Glyco_hydro_59

Glycosyl hydrolase family 59

107

397

0.73

Structural Annotation

Top 5 Hits

ID Description Score Start End
2wnw-assembly1.cif.gz_B the crystal structure of srfj from salmonella typhimurium 0.9367 26 442
5ngk-assembly1.cif.gz_A the endo-beta1,6-glucanase bt3312 0.9201 26 442
5ngl-assembly2.cif.gz_B the endo-beta1,6-glucanase bt3312 0.9179 26 442
5ngl-assembly3.cif.gz_C the endo-beta1,6-glucanase bt3312 0.917 26 442
6q6k-assembly1.cif.gz_B crystal structure of recombinant human beta-glucocerebrosidase in complex with cyclophellitol activity based probe with cy5 tag (me569) 0.9144 25 442
ID Description Score Start End Superfamily
2wnwB01 Mainly Beta;Sandwich;Immunoglobulin-like;Golgi alpha-mannosidase II 0.9592 384 442 2.60.40.1180
2wnwB02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.9296 68 381 3.20.20.80
af_O16581_75_447_3.20.20.80 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.9083 61 381 3.20.20.80
af_G5ECR8_80_454_3.20.20.80 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.9071 53 381 3.20.20.80
af_E7EZM1_451_513_2.60.40.1180 Mainly Beta;Sandwich;Immunoglobulin-like;Golgi alpha-mannosidase II 0.889 384 439 2.60.40.1180
ID Description Score Start End GO Terms
AF-A0A1M3FVK2-F1-model_v4 Glucosylceramidase 0.9911 25 442 GO:0004348
GO:0006680
GO:0016020
AF-A0A7Y0IJ05-F1-model_v4 Glucosylceramidase (EC 3.2.1.45) 0.9894 30 442 GO:0004348
GO:0006680
GO:0016020
AF-A0A520IE20-F1-model_v4 Glucosylceramidase 0.9871 120 442 GO:0004348
GO:0006680
GO:0016020
AF-C1F8F8-F1-model_v4 O-glycosyl hydrolase, family 30 0.984 26 442 GO:0004348
GO:0006680
GO:0016020
AF-A0A4Q3UC50-F1-model_v4 Glucosylceramidase 0.9792 136 418 GO:0004348
GO:0006680
GO:0016020

Map