F375843

General Info

Members Datasets Scaffolds Average Seq Length
268 187 258 387

Family's Representative Sequence

Representative Sequence 3300053153|Ga0500616_0000015|Ga0500616_0000015_77862_79178
Length 438
Sequence LPGKIDRVVRRLEDHCIGWDLDASRCIAENTFYLAGLNNQVIKMRLVLPVIVLSQFFCTSLWFAGNAIAPDIARDLHLDQHFLAHLTSAIQFGFISGTLLFAILSISDRFSPSWVFFCSSIFAGLFNLGMSLPGMETTELLLFRFLTGFFLAGIYPVGMKIASDHYKEGLGRSLGFLVGALVLGTAFPHLLKNSIAGLPWKYMVYATTALSLLGGLSILLFVPNGPYRKPGQRLNFTAFLKGFRLPDFRSVSFGYFGHMWELYTFWAFLPVMLINYNNRYPETNLNVSLWSFLIIASGGLACVLSGILSQYFGAKRVATIALSLSCLCCIASPLFLVSNSIVLLIVFLVIWGLVVIADSPLFSTLVARNAPEESRGTSLTIVNCIGFSITIVSIQFINVLSYRIDTQYVYTLLAIGPVFGLVALLKKEKSSVLASGQG

Samples

Sample ID Description Type Environment
1 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
2 2738541302 Pedobacter sp. CF074 Isolate Unclassified
3 2739367866 Hymenobacter sp. YR204 Isolate Unclassified
4 2857627736 Pedobacter sp. R-74587 Isolate Unclassified
5 2911138879 Spirosoma sp. KUDC1026 Isolate Rhizosphere
6 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
7 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
8 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
9 2945997725 Pedobacter sp. W3I1 Isolate Rhizosphere
10 2977232053 Mucilaginibacter terrae SORGH_AS 422 Isolate Unclassified
11 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
12 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
13 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
14 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
15 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
16 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
17 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
18 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
19 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
20 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
21 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
22 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
23 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
24 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
25 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
26 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
27 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
28 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
29 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
30 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
31 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
32 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
33 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
34 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
35 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
36 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
37 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
38 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
39 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
40 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
41 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
42 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
43 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
44 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
45 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
46 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
47 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
48 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
49 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
50 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
51 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
52 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
53 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
54 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
55 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
56 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
57 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
58 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
59 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
60 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
61 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
62 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
63 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
64 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
65 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
66 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
67 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
68 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
69 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
70 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
71 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
72 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
73 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
74 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
75 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
76 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
77 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
78 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
79 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
80 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
81 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
82 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
83 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
84 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
85 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
86 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
87 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
88 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
89 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
90 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
91 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
92 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
93 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
94 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
95 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
125 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
126 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
127 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
128 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
129 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
130 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
131 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
132 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
133 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
134 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
135 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
136 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
137 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
138 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
139 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
140 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
141 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
142 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
143 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
144 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
145 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
146 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
147 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
148 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
149 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
150 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
151 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
152 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
153 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
154 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
155 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
156 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
157 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
158 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
159 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
160 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
161 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
162 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
163 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
164 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
165 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
166 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
167 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
168 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
169 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
170 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
171 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
172 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
173 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
174 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
175 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
176 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
177 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
178 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
179 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
180 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
181 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
182 3300053105 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 endosphere Metagenome Endosphere
183 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
184 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
185 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
186 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
187 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.27
Metatranscriptomes 0
Isolates 3.73

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.07
Nodule 0
Rhizoplane 2.99
Rhizosphere 81.72
Stem 0
Stem Tuber 0
Unclassified 5.22

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24739J22299_10034682 3300001989 Bacteria 1717
2 JGI25162J39368_1000914 3300002737 Bacteria 19069
3 JGI25150J39212_1000013 3300002774 Bacteria 182307
4 JGI25151J46595_10000004 3300003187 Bacteria 494006
5 JGI25165J46597_1000689 3300003214 Bacteria 27036
6 JGI25153J46596_10000004 3300003215 Bacteria 494006
7 rootH1_10031480 3300003316 Bacteria 2769
8 rootH2_10093425 3300003320 Bacteria 5619
9 rootL2_10010356 3300003322 Bacteria 3390
10 rootL2_10300358 3300003322 Bacteria 2507
11 rootH1_10005851 3300003323 Bacteria 85811
12 rootH1_10095788 3300003323 Bacteria 10762
13 Ga0065714_10090862 3300005288 Bacteria 1929
14 Ga0065714_10106335 3300005288 Bacteria 1551
15 Ga0070658_10146546 3300005327 Bacteria 1974
16 Ga0070676_10024431 3300005328 Bacteria 3404
17 Ga0070676_10097509 3300005328 Bacteria 1811
18 Ga0070683_100002140 3300005329 Bacteria 15613
19 Ga0070683_100002831 3300005329 Bacteria 13883
20 Ga0070683_100077538 3300005329 Bacteria 3108
21 Ga0070683_100103121 3300005329 Bacteria 2688
22 Ga0070683_100116709 3300005329 Bacteria 2520
23 Ga0070690_100171197 3300005330 Bacteria 1494
24 Ga0068869_100038680 3300005334 Bacteria 3402
25 Ga0068868_100003183 3300005338 Bacteria 11417
26 Ga0068868_100103974 3300005338 Bacteria 2301
27 Ga0070660_100012538 3300005339 Bacteria 6056
28 Ga0070689_100042146 3300005340 Bacteria 3505
29 Ga0070687_100118751 3300005343 Unclassified 1509
30 Ga0070661_100002067 3300005344 Bacteria 13820
31 Ga0070661_100051814 3300005344 Bacteria 3004
32 Ga0070668_100101625 3300005347 Bacteria 2279
33 Ga0070669_100144332 3300005353 Unclassified 1838
34 Ga0070675_100048841 3300005354 Bacteria 3471
35 Ga0070671_100022104 3300005355 Bacteria 5196
36 Ga0070671_100210359 3300005355 Unclassified 1650
37 Ga0070671_100231325 3300005355 Bacteria 1569
38 Ga0070673_100012446 3300005364 Bacteria 5842
39 Ga0070673_100094351 3300005364 Bacteria 2452
40 Ga0070673_100214985 3300005364 Bacteria 1661
41 Ga0070688_100035361 3300005365 Bacteria 3034
42 Ga0070659_100000166 3300005366 Bacteria 51012
43 Ga0070667_100291372 3300005367 Bacteria 1468
44 Ga0070678_100310648 3300005456 Unclassified 1343
45 Ga0070662_100077003 3300005457 Bacteria 2474
46 Ga0068867_100080489 3300005459 Bacteria 2453
47 Ga0070685_10027440 3300005466 Bacteria 3146
48 Ga0070684_100005082 3300005535 Bacteria 10048
49 Ga0070684_100021375 3300005535 Bacteria 5384
50 Ga0070684_100295678 3300005535 Bacteria 1485
51 Ga0068853_100011731 3300005539 Bacteria 7121
52 Ga0068853_100090922 3300005539 Unclassified 2683
53 Ga0068853_100116698 3300005539 Bacteria 2377
54 Ga0068853_100241339 3300005539 Bacteria 1656
55 Ga0070672_100194652 3300005543 Unclassified 1694
56 Ga0070686_100011596 3300005544 Bacteria 5003
57 Ga0070665_100106797 3300005548 Bacteria 2802
58 Ga0068855_100052847 3300005563 Bacteria 4782
59 Ga0068855_100239689 3300005563 Bacteria 2027
60 Ga0070664_100000904 3300005564 Bacteria 23111
61 Ga0070664_100001152 3300005564 Bacteria 20949
62 Ga0068857_100005746 3300005577 Bacteria 10608
63 Ga0068857_100215817 3300005577 Bacteria 1751
64 Ga0068854_100042935 3300005578 Bacteria 3203
65 Ga0068856_100178447 3300005614 Archaea 2136
66 Ga0068852_100006270 3300005616 Bacteria 8582
67 Ga0068859_100005886 3300005617 Bacteria 12446
68 Ga0068859_100041247 3300005617 Bacteria 4636
69 Ga0068864_100039064 3300005618 Bacteria 4055
70 Ga0068861_100272895 3300005719 Bacteria 1453
71 Ga0068863_100059637 3300005841 Bacteria 3610
72 Ga0075366_10000864 3300006195 Bacteria 14613
73 Ga0097621_100049592 3300006237 Bacteria 3411
74 Ga0068865_100043352 3300006881 Bacteria 3073
75 Ga0068865_100054163 3300006881 Bacteria 2786
76 Ga0097620_100005886 3300006931 Bacteria 12446
77 Ga0097620_100041246 3300006931 Bacteria 4636
78 Ga0105240_10090003 3300009093 Bacteria 3752
79 Ga0105240_10116782 3300009093 Bacteria 3218
80 Ga0105241_10083552 3300009174 Bacteria 2505
81 Ga0105237_10001098 3300009545 Bacteria 36167
82 Ga0105239_10000007 3300010375 Bacteria 385297
83 Ga0105239_10000106 3300010375 Bacteria 117256
84 Ga0105239_10271152 3300010375 Bacteria 1909
85 Ga0157373_10000175 3300013100 Bacteria 52539
86 Ga0157373_10033711 3300013100 Bacteria 3681
87 Ga0157373_10092192 3300013100 Bacteria 2134
88 Ga0157371_10000229 3300013102 Bacteria 81458
89 Ga0157371_10073770 3300013102 Bacteria 2417
90 Ga0157370_10039405 3300013104 Bacteria 4566
91 Ga0157370_10046463 3300013104 Bacteria 4163
92 Ga0157370_10053923 3300013104 Bacteria 3833
93 Ga0157369_10000046 3300013105 Bacteria 172851
94 Ga0157374_10000847 3300013296 Bacteria 26750
95 Ga0157374_10050481 3300013296 Bacteria 3867
96 Ga0157378_10006639 3300013297 Bacteria 10109
97 Ga0157378_10021082 3300013297 Bacteria 5733
98 Ga0157378_10041700 3300013297 Bacteria 4072
99 Ga0157378_10140326 3300013297 Bacteria 2244
100 Ga0163162_10001980 3300013306 Bacteria 19236
101 Ga0163162_10005439 3300013306 Bacteria 12307
102 Ga0163162_10029945 3300013306 Bacteria 5390
103 Ga0163162_10058951 3300013306 Bacteria 3869
104 Ga0163162_10103650 3300013306 Unclassified 2939
105 Ga0157372_10000051 3300013307 Bacteria 136437
106 Ga0157372_10004907 3300013307 Bacteria 14218
107 Ga0157372_10014471 3300013307 Bacteria 8443
108 Ga0157372_10118781 3300013307 Bacteria 3034
109 Ga0157372_10146674 3300013307 Bacteria 2721
110 Ga0157372_10197785 3300013307 Bacteria 2328
111 Ga0157375_10012019 3300013308 Bacteria 7667
112 Ga0157375_10016985 3300013308 Bacteria 6557
113 Ga0157375_10144403 3300013308 Unclassified 2509
114 Ga0163163_10001370 3300014325 Bacteria 20566
115 Ga0157380_10000704 3300014326 Bacteria 20846
116 Ga0157380_10016304 3300014326 Bacteria 5477
117 Ga0157380_10021338 3300014326 Bacteria 4856
118 Ga0157377_10011451 3300014745 Bacteria 4427
119 Ga0157379_10306303 3300014968 Unclassified 1448
120 Ga0157376_10107207 3300014969 Bacteria 2452
121 Ga0182006_1000229 3300015261 Bacteria 53391
122 Ga0182007_10000009 3300015262 Bacteria 316298
123 Ga0163161_10023842 3300017792 Unclassified 4318
124 Ga0163161_10044460 3300017792 Bacteria 3198
125 Ga0209563_101498 3300025230 Bacteria 6137
126 Ga0207427_100025 3300025231 Bacteria 433726
127 Ga0209437_100010 3300025233 Bacteria 838447
128 Ga0207425_1000008 3300025245 Bacteria 618024
129 Ga0209026_1000386 3300025250 Bacteria 40046
130 Ga0209129_1000042 3300025258 Bacteria 305537
131 Ga0209233_1000017 3300025261 Bacteria 898076
132 Ga0209233_1000682 3300025261 Bacteria 16143
133 Ga0209455_1001718 3300025272 Bacteria 9364
134 Ga0209025_1000020 3300025294 Bacteria 618024
135 Ga0209758_1000022 3300025297 Bacteria 618024
136 Ga0209050_1001063 3300025298 Bacteria 33728
137 Ga0209050_1005023 3300025298 Bacteria 8586
138 Ga0207642_10071853 3300025899 Bacteria 1649
139 Ga0207647_10000094 3300025904 Bacteria 68043
140 Ga0207647_10000137 3300025904 Bacteria 58128
141 Ga0207647_10045559 3300025904 Bacteria 2736
142 Ga0207645_10008130 3300025907 Bacteria 7351
143 Ga0207695_10049338 3300025913 Bacteria 4439
144 Ga0207671_10000937 3300025914 Bacteria 36380
145 Ga0207657_10021496 3300025919 Bacteria 6069
146 Ga0207657_10208204 3300025919 Unclassified 1571
147 Ga0207649_10001551 3300025920 Bacteria 13457
148 Ga0207650_10163327 3300025925 Unclassified 1766
149 Ga0207690_10000168 3300025932 Bacteria 51052
150 Ga0207706_10002444 3300025933 Bacteria 18134
151 Ga0207706_10091981 3300025933 Bacteria 2667
152 Ga0207670_10012018 3300025936 Bacteria 5046
153 Ga0207704_10035774 3300025938 Bacteria 2850
154 Ga0207691_10022795 3300025940 Bacteria 5903
155 Ga0207691_10047917 3300025940 Bacteria 3919
156 Ga0207689_10024824 3300025942 Bacteria 5025
157 Ga0207661_10002558 3300025944 Bacteria 12513
158 Ga0207661_10034594 3300025944 Bacteria 3931
159 Ga0207661_10084979 3300025944 Bacteria 2622
160 Ga0207679_10000543 3300025945 Bacteria 25394
161 Ga0207679_10001669 3300025945 Bacteria 13828
162 Ga0207679_10137354 3300025945 Bacteria 1970
163 Ga0207651_10175785 3300025960 Unclassified 1693
164 Ga0207658_10070823 3300025986 Bacteria 2639
165 Ga0207703_10184108 3300026035 Bacteria 1845
166 Ga0207678_10352995 3300026067 Unclassified 1268
167 Ga0207708_10135933 3300026075 Bacteria 1925
168 Ga0207641_10022270 3300026088 Bacteria 5215
169 Ga0207641_10209068 3300026088 Bacteria 1804
170 Ga0207648_10152874 3300026089 Bacteria 2036
171 Ga0207648_10264882 3300026089 Bacteria 1534
172 Ga0207676_10033743 3300026095 Bacteria 3869
173 Ga0207674_10064329 3300026116 Bacteria 3700
174 Ga0207674_10135160 3300026116 Bacteria 2428
175 Ga0207674_10151350 3300026116 Bacteria 2277
176 Ga0207675_100073866 3300026118 Unclassified 3191
177 Ga0207675_100194816 3300026118 Bacteria 1945
178 Ga0207683_10062161 3300026121 Bacteria 3288
179 Ga0207683_10347560 3300026121 Bacteria 1361
180 Ga0207698_10023085 3300026142 Bacteria 4340
181 Ga0268264_10156966 3300028381 Unclassified 2046
182 Ga0268264_10188268 3300028381 Bacteria 1879
183 Ga0307516_10006291 3300031730 Bacteria 13956
184 Ga0307414_10220877 3300032004 Bacteria 1556
185 Ga0373953_0053830 3300035117 Bacteria 1632
186 Ga0373955_0005068 3300035172 Bacteria 5891
187 Ga0373927_0034879 3300035695 Bacteria 3272
188 Ga0373937_0100552 3300036401 Bacteria 2683
189 Ga0395905_0128150 3300037471 Bacteria 2387
190 Ga0451577_0013280 3300042876 Bacteria 7717
191 Ga0451577_0014668 3300042876 Bacteria 7299
192 Ga0453683_0010205 3300044673 Bacteria 6234
193 Ga0453684_0001703 3300044712 Bacteria 59231
194 Ga0453684_0058128 3300044712 Bacteria 4997
195 Ga0451576_0001974 3300045051 Bacteria 32631
196 Ga0495638_0000054 3300046460 Bacteria 196524
197 Ga0495650_0000349 3300046471 Bacteria 81735
198 Ga0495585_0000194 3300046492 Bacteria 62923
199 Ga0495583_0013037 3300046506 Bacteria 4664
200 Ga0495606_0000009 3300046507 Bacteria 306313
201 Ga0495606_0046704 3300046507 Bacteria 2861
202 Ga0495610_0000167 3300046512 Bacteria 73458
203 Ga0495610_0004445 3300046512 Bacteria 10365
204 Ga0495628_0044024 3300046516 Unclassified 3553
205 Ga0495630_0052957 3300046517 Bacteria 3038
206 Ga0495637_0041985 3300046520 Bacteria 1959
207 Ga0495587_0048068 3300046536 Unclassified 2528
208 Ga0495609_0063449 3300046538 Bacteria 1630
209 Ga0495633_0010343 3300046558 Bacteria 5097
210 Ga0495611_0111821 3300046648 Bacteria 1272
211 Ga0495625_0000007 3300046660 Bacteria 565749
212 Ga0495625_0002936 3300046660 Bacteria 17782
213 Ga0495625_0101942 3300046660 Unclassified 1970
214 Ga0495661_0002322 3300046665 Bacteria 14673
215 Ga0495661_0019649 3300046665 Bacteria 4423
216 Ga0495661_0019965 3300046665 Bacteria 4382
217 Ga0495599_0206611 3300046678 Bacteria 1205
218 Ga0495613_0121812 3300046689 Unclassified 1873
219 Ga0495649_0000007 3300046694 Bacteria 518037
220 Ga0495600_0053889 3300046809 Bacteria 2627
221 Ga0495672_0014393 3300047320 Bacteria 5420
222 Ga0495687_002147 3300047443 Bacteria 16458
223 Ga0495686_0001404 3300047472 Bacteria 26590
224 Ga0495686_0001492 3300047472 Bacteria 25345
225 Ga0496100_0339515 3300048903 Bacteria 1132
226 Ga0496104_0016398 3300048907 Bacteria 6730
227 Ga0496106_0277554 3300048909 Bacteria 1342
228 Ga0496110_0100037 3300048913 Bacteria 2599
229 Ga0496110_0210767 3300048913 Bacteria 1766
230 Ga0496112_0131573 3300048915 Bacteria 2473
231 Ga0496115_0077363 3300048918 Bacteria 2705
232 Ga0495678_009795 3300049459 Bacteria 4706
233 Ga0501032_0002810 3300049569 Bacteria 13533
234 Ga0501034_0071264 3300049571 Bacteria 3485
235 Ga0501036_0006337 3300049572 Bacteria 9602
236 Ga0501039_0007942 3300049575 Bacteria 8083
237 Ga0501043_0002617 3300049579 Bacteria 15178
238 Ga0501046_0011578 3300049580 Bacteria 7541
239 Ga0501047_0325349 3300049581 Bacteria 1376
240 Ga0501073_0005702 3300049589 Bacteria 9313
241 Ga0501074_0003660 3300049590 Bacteria 10907
242 Ga0501079_0159142 3300049741 Bacteria 1760
243 Ga0501080_0087816 3300049742 Bacteria 2888
244 Ga0501083_0033376 3300049744 Bacteria 3525
245 Ga0501044_0061129 3300049823 Bacteria 3854
246 Ga0501045_0357499 3300049824 Bacteria 1087
247 nmdc:mga0k408_44_c2 3300050493 Bacteria 32487
248 nmdc:mga0k408_64065_c1 3300050493 Bacteria 2139
249 Ga0500635_0000333 3300053080 Bacteria 16168
250 Ga0495619_0090699 3300053085 Bacteria 2069
251 Ga0500641_0017682 3300053096 Bacteria 2671
252 Ga0500557_017097 3300053105 Bacteria 1996
253 Ga0500568_0044827 3300053139 Bacteria 1761
254 Ga0500616_0000015 3300053153 Bacteria 633259
255 Ga0500616_0008350 3300053153 Bacteria 6444
256 Ga0500622_0000465 3300053156 Bacteria 38456
257 Ga0501084_0026826 3300054114 Bacteria 4812
258 Ga0501082_0263023 3300060353 Bacteria 1501

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048903 Ga0496100_0339515 Ga0496100_0339515_110_1105 317
2 3300049581 Ga0501047_0325349 Ga0501047_0325349_60_1094 338
3 3300049824 Ga0501045_0357499 Ga0501045_0357499_32_1066 338
4 3300005328 Ga0070676_10097509 Ga0070676_100975092 349
5 3300005355 Ga0070671_100022104 Ga0070671_1000221041 349
6 3300005543 Ga0070672_100194652 Ga0070672_1001946521 349
7 3300005544 Ga0070686_100011596 Ga0070686_1000115965 349
8 3300013297 Ga0157378_10006639 Ga0157378_100066399 349
9 3300025940 Ga0207691_10022795 Ga0207691_100227955 349
10 3300025945 Ga0207679_10137354 Ga0207679_101373542 349
11 3300005343 Ga0070687_100118751 Ga0070687_1001187511 350
12 3300005364 Ga0070673_100214985 Ga0070673_1002149851 350
13 3300025945 Ga0207679_10001669 Ga0207679_1000166910 351
14 3300014745 Ga0157377_10011451 Ga0157377_100114513 353
15 3300005364 Ga0070673_100094351 Ga0070673_1000943512 357
16 3300014326 Ga0157380_10021338 Ga0157380_100213383 358
17 3300053139 Ga0500568_0044827 Ga0500568_0044827_639_1751 358
18 3300035695 Ga0373927_0034879 Ga0373927_0034879_958_2124 360
19 3300003323 rootH1_10005851 rootH1_1000585140 362
20 3300046507 Ga0495606_0000009 Ga0495606_0000009_268264_269352 362
21 3300047320 Ga0495672_0014393 Ga0495672_0014393_3595_4755 362
22 3300025298 Ga0209050_1001063 Ga0209050_10010634 363
23 3300035117 Ga0373953_0053830 Ga0373953_0053830_113_1258 363
24 3300036401 Ga0373937_0100552 Ga0373937_0100552_1137_2282 363
25 3300046516 Ga0495628_0044024 Ga0495628_0044024_469_1614 363
26 3300046809 Ga0495600_0053889 Ga0495600_0053889_1049_2194 363
27 3300053096 Ga0500641_0017682 Ga0500641_0017682_28_1119 363
28 3300005288 Ga0065714_10106335 Ga0065714_101063351 364
29 3300013297 Ga0157378_10140326 Ga0157378_101403261 364
30 3300005563 Ga0068855_100052847 Ga0068855_1000528473 365
31 3300014326 Ga0157380_10000704 Ga0157380_100007043 365
32 3300005288 Ga0065714_10090862 Ga0065714_100908622 366
33 3300046678 Ga0495599_0206611 Ga0495599_0206611_75_1187 367
34 3300005719 Ga0068861_100272895 Ga0068861_1002728952 368
35 3300025230 Ga0209563_101498 Ga0209563_1014983 368
36 3300026118 Ga0207675_100194816 Ga0207675_1001948162 368
37 3300028381 Ga0268264_10188268 Ga0268264_101882682 368
38 3300053105 Ga0500557_017097 Ga0500557_017097_346_1539 368
39 3300005355 Ga0070671_100210359 Ga0070671_1002103592 369
40 3300005539 Ga0068853_100090922 Ga0068853_1000909222 369
41 3300009093 Ga0105240_10116782 Ga0105240_101167822 370
42 3300010375 Ga0105239_10000007 Ga0105239_1000000736 370
43 3300009545 Ga0105237_10001098 Ga0105237_1000109818 371
44 3300025914 Ga0207671_10000937 Ga0207671_1000093723 371
45 3300010375 Ga0105239_10271152 Ga0105239_102711522 372
46 3300048907 Ga0496104_0016398 Ga0496104_0016398_379_1578 372
47 3300048909 Ga0496106_0277554 Ga0496106_0277554_118_1317 372
48 3300048915 Ga0496112_0131573 Ga0496112_0131573_346_1545 372
49 3300048918 Ga0496115_0077363 Ga0496115_0077363_784_1983 372
50 3300014969 Ga0157376_10107207 Ga0157376_101072072 373
51 3300013104 Ga0157370_10046463 Ga0157370_100464633 374
52 3300013297 Ga0157378_10021082 Ga0157378_100210824 374
53 3300025298 Ga0209050_1005023 Ga0209050_10050235 374
54 3300005456 Ga0070678_100310648 Ga0070678_1003106481 377
55 3300035172 Ga0373955_0005068 Ga0373955_0005068_4390_5535 378
56 3300046517 Ga0495630_0052957 Ga0495630_0052957_271_1416 378
57 3300049569 Ga0501032_0002810 Ga0501032_0002810_1498_2652 378
58 3300049571 Ga0501034_0071264 Ga0501034_0071264_2168_3322 378
59 3300049572 Ga0501036_0006337 Ga0501036_0006337_8006_9160 378
60 3300049575 Ga0501039_0007942 Ga0501039_0007942_5571_6725 378
61 3300049579 Ga0501043_0002617 Ga0501043_0002617_12702_13856 378
62 3300049580 Ga0501046_0011578 Ga0501046_0011578_852_2006 378
63 3300049589 Ga0501073_0005702 Ga0501073_0005702_667_1821 378
64 3300049590 Ga0501074_0003660 Ga0501074_0003660_3404_4558 378
65 3300049741 Ga0501079_0159142 Ga0501079_0159142_465_1619 378
66 3300049742 Ga0501080_0087816 Ga0501080_0087816_155_1309 378
67 3300049744 Ga0501083_0033376 Ga0501083_0033376_1666_2820 378
68 3300049823 Ga0501044_0061129 Ga0501044_0061129_810_1964 378
69 3300053085 Ga0495619_0090699 Ga0495619_0090699_526_1671 378
70 3300054114 Ga0501084_0026826 Ga0501084_0026826_3012_4166 378
71 3300005616 Ga0068852_100006270 Ga0068852_1000062704 379
72 3300013307 Ga0157372_10014471 Ga0157372_100144717 379
73 3300013307 Ga0157372_10118781 Ga0157372_101187812 379
74 3300025904 Ga0207647_10000094 Ga0207647_1000009452 379
75 3300025919 Ga0207657_10208204 Ga0207657_102082042 379
76 3300026142 Ga0207698_10023085 Ga0207698_100230853 379
77 3300046460 Ga0495638_0000054 Ga0495638_0000054_137816_139087 381
78 iso_pu_bacteria 2977232053 2977235530 381
79 3300002737 JGI25162J39368_1000914 JGI25162J39368_10009149 382
80 3300003214 JGI25165J46597_1000689 JGI25165J46597_100068925 382
81 3300005327 Ga0070658_10146546 Ga0070658_101465461 382
82 3300025231 Ga0207427_100025 Ga0207427_100025165 382
83 3300025233 Ga0209437_100010 Ga0209437_100010427 382
84 3300025261 Ga0209233_1000017 Ga0209233_1000017440 382
85 3300042876 Ga0451577_0014668 Ga0451577_0014668_3074_4267 382
86 3300044712 Ga0453684_0058128 Ga0453684_0058128_825_2018 382
87 3300003322 rootL2_10010356 rootL2_100103561 383
88 3300003322 rootL2_10300358 rootL2_103003582 383
89 3300013104 Ga0157370_10053923 Ga0157370_100539232 383
90 3300014326 Ga0157380_10016304 Ga0157380_100163043 383
91 3300005328 Ga0070676_10024431 Ga0070676_100244312 384
92 3300005329 Ga0070683_100002831 Ga0070683_10000283111 384
93 3300005329 Ga0070683_100077538 Ga0070683_1000775382 384
94 3300005329 Ga0070683_100103121 Ga0070683_1001031212 384
95 3300005330 Ga0070690_100171197 Ga0070690_1001711972 384
96 3300005334 Ga0068869_100038680 Ga0068869_1000386803 384
97 3300005338 Ga0068868_100003183 Ga0068868_1000031831 384
98 3300005338 Ga0068868_100103974 Ga0068868_1001039743 384
99 3300005340 Ga0070689_100042146 Ga0070689_1000421464 384
100 3300005344 Ga0070661_100051814 Ga0070661_1000518142 384
101 3300005353 Ga0070669_100144332 Ga0070669_1001443322 384
102 3300005354 Ga0070675_100048841 Ga0070675_1000488413 384
103 3300005355 Ga0070671_100231325 Ga0070671_1002313251 384
104 3300005364 Ga0070673_100012446 Ga0070673_1000124462 384
105 3300005365 Ga0070688_100035361 Ga0070688_1000353612 384
106 3300005367 Ga0070667_100291372 Ga0070667_1002913721 384
107 3300005457 Ga0070662_100077003 Ga0070662_1000770032 384
108 3300005466 Ga0070685_10027440 Ga0070685_100274403 384
109 3300005535 Ga0070684_100005082 Ga0070684_1000050826 384
110 3300005539 Ga0068853_100241339 Ga0068853_1002413392 384
111 3300005548 Ga0070665_100106797 Ga0070665_1001067972 384
112 3300005563 Ga0068855_100239689 Ga0068855_1002396892 384
113 3300005564 Ga0070664_100000904 Ga0070664_10000090416 384
114 3300005577 Ga0068857_100005746 Ga0068857_1000057466 384
115 3300005577 Ga0068857_100215817 Ga0068857_1002158172 384
116 3300005578 Ga0068854_100042935 Ga0068854_1000429353 384
117 3300005617 Ga0068859_100041247 Ga0068859_1000412474 384
118 3300005618 Ga0068864_100039064 Ga0068864_1000390643 384
119 3300006237 Ga0097621_100049592 Ga0097621_1000495922 384
120 3300006881 Ga0068865_100043352 Ga0068865_1000433523 384
121 3300006881 Ga0068865_100054163 Ga0068865_1000541634 384
122 3300006931 Ga0097620_100041246 Ga0097620_1000412464 384
123 3300013100 Ga0157373_10033711 Ga0157373_100337113 384
124 3300013102 Ga0157371_10000229 Ga0157371_1000022952 384
125 3300013104 Ga0157370_10039405 Ga0157370_100394055 384
126 3300013296 Ga0157374_10000847 Ga0157374_1000084715 384
127 3300013296 Ga0157374_10050481 Ga0157374_100504814 384
128 3300013297 Ga0157378_10041700 Ga0157378_100417003 384
129 3300013306 Ga0163162_10005439 Ga0163162_1000543911 384
130 3300013306 Ga0163162_10029945 Ga0163162_100299453 384
131 3300013306 Ga0163162_10058951 Ga0163162_100589513 384
132 3300013306 Ga0163162_10103650 Ga0163162_101036503 384
133 3300013307 Ga0157372_10000051 Ga0157372_1000005143 384
134 3300013307 Ga0157372_10197785 Ga0157372_101977851 384
135 3300013308 Ga0157375_10012019 Ga0157375_100120196 384
136 3300013308 Ga0157375_10016985 Ga0157375_100169853 384
137 3300013308 Ga0157375_10144403 Ga0157375_101444032 384
138 3300014325 Ga0163163_10001370 Ga0163163_1000137013 384
139 3300014968 Ga0157379_10306303 Ga0157379_103063032 384
140 3300017792 Ga0163161_10023842 Ga0163161_100238422 384
141 3300017792 Ga0163161_10044460 Ga0163161_100444602 384
142 3300025261 Ga0209233_1000682 Ga0209233_100068210 384
143 3300025899 Ga0207642_10071853 Ga0207642_100718531 384
144 3300025904 Ga0207647_10000137 Ga0207647_100001372 384
145 3300025907 Ga0207645_10008130 Ga0207645_100081306 384
146 3300025920 Ga0207649_10001551 Ga0207649_100015516 384
147 3300025925 Ga0207650_10163327 Ga0207650_101633271 384
148 3300025933 Ga0207706_10002444 Ga0207706_1000244410 384
149 3300025933 Ga0207706_10091981 Ga0207706_100919812 384
150 3300025936 Ga0207670_10012018 Ga0207670_100120183 384
151 3300025938 Ga0207704_10035774 Ga0207704_100357742 384
152 3300025940 Ga0207691_10047917 Ga0207691_100479172 384
153 3300025942 Ga0207689_10024824 Ga0207689_100248242 384
154 3300025944 Ga0207661_10002558 Ga0207661_100025588 384
155 3300025945 Ga0207679_10000543 Ga0207679_100005439 384
156 3300025960 Ga0207651_10175785 Ga0207651_101757852 384
157 3300025986 Ga0207658_10070823 Ga0207658_100708232 384
158 3300026035 Ga0207703_10184108 Ga0207703_101841081 384
159 3300026067 Ga0207678_10352995 Ga0207678_103529951 384
160 3300026075 Ga0207708_10135933 Ga0207708_101359332 384
161 3300026088 Ga0207641_10209068 Ga0207641_102090682 384
162 3300026089 Ga0207648_10152874 Ga0207648_101528742 384
163 3300026095 Ga0207676_10033743 Ga0207676_100337433 384
164 3300026116 Ga0207674_10064329 Ga0207674_100643292 384
165 3300026116 Ga0207674_10135160 Ga0207674_101351602 384
166 3300026116 Ga0207674_10151350 Ga0207674_101513502 384
167 3300026118 Ga0207675_100073866 Ga0207675_1000738662 384
168 3300026121 Ga0207683_10062161 Ga0207683_100621611 384
169 3300028381 Ga0268264_10156966 Ga0268264_101569662 384
170 3300037471 Ga0395905_0128150 Ga0395905_0128150_218_1372 384
171 3300042876 Ga0451577_0013280 Ga0451577_0013280_3416_4570 384
172 3300044712 Ga0453684_0001703 Ga0453684_0001703_19555_20709 384
173 3300046536 Ga0495587_0048068 Ga0495587_0048068_49_1320 384
174 3300046689 Ga0495613_0121812 Ga0495613_0121812_434_1705 384
175 3300048913 Ga0496110_0100037 Ga0496110_0100037_47_1222 384
176 3300048913 Ga0496110_0210767 Ga0496110_0210767_256_1431 384
177 iso_pu_bacteria 2911138879 2911143113 384
178 3300005329 Ga0070683_100002140 Ga0070683_1000021403 385
179 3300005344 Ga0070661_100002067 Ga0070661_10000206711 385
180 3300005347 Ga0070668_100101625 Ga0070668_1001016251 385
181 3300005535 Ga0070684_100021375 Ga0070684_1000213753 385
182 3300005539 Ga0068853_100011731 Ga0068853_1000117313 385
183 3300005564 Ga0070664_100001152 Ga0070664_10000115212 385
184 3300013100 Ga0157373_10092192 Ga0157373_100921922 385
185 3300025944 Ga0207661_10034594 Ga0207661_100345943 385
186 3300026089 Ga0207648_10264882 Ga0207648_102648822 385
187 3300053080 Ga0500635_0000333 Ga0500635_0000333_11663_12820 385
188 3300003320 rootH2_10093425 rootH2_100934253 386
189 3300005459 Ga0068867_100080489 Ga0068867_1000804893 386
190 3300013306 Ga0163162_10001980 Ga0163162_1000198017 386
191 3300046512 Ga0495610_0004445 Ga0495610_0004445_6019_7179 386
192 3300046558 Ga0495633_0010343 Ga0495633_0010343_1907_3067 386
193 3300046665 Ga0495661_0002322 Ga0495661_0002322_1322_2482 386
194 iso_pu_bacteria 2599185184 2599481274 386
195 iso_pu_bacteria 2739367866 2740032587 386
196 iso_pu_bacteria 2928078545 2928081871 386
197 iso_pu_bacteria 2928147474 2928151894 386
198 iso_pu_bacteria 2932082852 2932087202 386
199 iso_pu_bacteria 2945997725 2945998593 386
200 3300003316 rootH1_10031480 rootH1_100314803 387
201 3300005339 Ga0070660_100012538 Ga0070660_1000125383 387
202 3300005366 Ga0070659_100000166 Ga0070659_10000016617 387
203 3300005617 Ga0068859_100005886 Ga0068859_1000058863 387
204 3300006931 Ga0097620_100005886 Ga0097620_1000058863 387
205 3300015261 Ga0182006_1000229 Ga0182006_100022945 387
206 3300025919 Ga0207657_10021496 Ga0207657_100214963 387
207 3300025932 Ga0207690_10000168 Ga0207690_1000016817 387
208 3300047443 Ga0495687_002147 Ga0495687_002147_12760_13923 387
209 3300053153 Ga0500616_0008350 Ga0500616_0008350_265_1452 387
210 3300002774 JGI25150J39212_1000013 JGI25150J39212_1000013116 388
211 3300003187 JGI25151J46595_10000004 JGI25151J46595_1000000454 388
212 3300003215 JGI25153J46596_10000004 JGI25153J46596_1000000454 388
213 3300013105 Ga0157369_10000046 Ga0157369_1000004650 388
214 3300013307 Ga0157372_10146674 Ga0157372_101466742 388
215 3300015262 Ga0182007_10000009 Ga0182007_10000009159 388
216 3300025245 Ga0207425_1000008 Ga0207425_1000008378 388
217 3300025258 Ga0209129_1000042 Ga0209129_1000042113 388
218 3300025294 Ga0209025_1000020 Ga0209025_1000020378 388
219 3300025297 Ga0209758_1000022 Ga0209758_1000022378 388
220 3300032004 Ga0307414_10220877 Ga0307414_102208771 388
221 3300046648 Ga0495611_0111821 Ga0495611_0111821_57_1223 388
222 3300053156 Ga0500622_0000465 Ga0500622_0000465_3737_4903 388
223 iso_pu_bacteria 2738541302 2738854180 388
224 3300005614 Ga0068856_100178447 Ga0068856_1001784471 389
225 3300005841 Ga0068863_100059637 Ga0068863_1000596372 389
226 3300009174 Ga0105241_10083552 Ga0105241_100835523 389
227 3300025272 Ga0209455_1001718 Ga0209455_10017189 389
228 3300025913 Ga0207695_10049338 Ga0207695_100493384 389
229 3300026088 Ga0207641_10022270 Ga0207641_100222702 389
230 3300026121 Ga0207683_10347560 Ga0207683_103475601 389
231 3300046471 Ga0495650_0000349 Ga0495650_0000349_59538_60707 389
232 3300046492 Ga0495585_0000194 Ga0495585_0000194_53981_55150 389
233 3300046506 Ga0495583_0013037 Ga0495583_0013037_2046_3215 389
234 3300046507 Ga0495606_0046704 Ga0495606_0046704_301_1470 389
235 3300046520 Ga0495637_0041985 Ga0495637_0041985_197_1378 389
236 3300046538 Ga0495609_0063449 Ga0495609_0063449_222_1391 389
237 3300046660 Ga0495625_0000007 Ga0495625_0000007_62686_63855 389
238 3300046665 Ga0495661_0019965 Ga0495661_0019965_1899_3068 389
239 3300046694 Ga0495649_0000007 Ga0495649_0000007_371560_372729 389
240 3300060353 Ga0501082_0263023 Ga0501082_0263023_213_1409 389
241 3300001989 JGI24739J22299_10034682 JGI24739J22299_100346822 390
242 3300003323 rootH1_10095788 rootH1_100957886 390
243 3300005329 Ga0070683_100116709 Ga0070683_1001167091 390
244 3300005535 Ga0070684_100295678 Ga0070684_1002956781 390
245 3300005539 Ga0068853_100116698 Ga0068853_1001166981 390
246 3300006195 Ga0075366_10000864 Ga0075366_100008649 390
247 3300009093 Ga0105240_10090003 Ga0105240_100900034 390
248 3300010375 Ga0105239_10000106 Ga0105239_100001065 390
249 3300013100 Ga0157373_10000175 Ga0157373_1000017523 390
250 3300013102 Ga0157371_10073770 Ga0157371_100737702 390
251 3300013307 Ga0157372_10004907 Ga0157372_100049075 390
252 3300025250 Ga0209026_1000386 Ga0209026_100038627 390
253 3300025904 Ga0207647_10045559 Ga0207647_100455592 390
254 3300025944 Ga0207661_10084979 Ga0207661_100849792 390
255 3300031730 Ga0307516_10006291 Ga0307516_100062912 390
256 3300044673 Ga0453683_0010205 Ga0453683_0010205_4363_5553 390
257 3300045051 Ga0451576_0001974 Ga0451576_0001974_14688_15878 390
258 3300046512 Ga0495610_0000167 Ga0495610_0000167_58320_59501 390
259 3300046660 Ga0495625_0002936 Ga0495625_0002936_2719_3930 390
260 3300046660 Ga0495625_0101942 Ga0495625_0101942_132_1325 390
261 3300046665 Ga0495661_0019649 Ga0495661_0019649_3195_4376 390
262 3300047472 Ga0495686_0001404 Ga0495686_0001404_14794_15996 390
263 3300047472 Ga0495686_0001492 Ga0495686_0001492_3566_4738 390
264 3300049459 Ga0495678_009795 Ga0495678_009795_526_1719 390
265 3300050493 nmdc:mga0k408_44_c2 nmdc:mga0k408_44_c2_29314_30525 390
266 3300050493 nmdc:mga0k408_64065_c1 nmdc:mga0k408_64065_c1_225_1397 390
267 3300053153 Ga0500616_0000015 Ga0500616_0000015_77862_79178 390
268 iso_pu_bacteria 2857627736 2857630476 390

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07690

MFS_1

Major Facilitator Superfamily

251

432

0.86

PF07690

MFS_1

Major Facilitator Superfamily

51

394

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
8ex6-assembly1.cif.gz_A human s1p transporter spns2 in an inward-facing open conformation (state 1*) 0.8715 2 384
7yr5-assembly1.cif.gz_A embigin facilitates monocarboxylate transporter 1 localization to plasma membrane and transition to a decoupling state 0.8633 4 387
7yub-assembly1.cif.gz_R s1p-bound human spns2 0.858 4 384
8ex6-assembly1.cif.gz_A human s1p transporter spns2 in an inward-facing open conformation (state 1*) 0.8548 2 384
8g92-assembly1.cif.gz_A structure of inhibitor 16d-bound spns2 0.8496 2 384
ID Description Score Start End Superfamily
af_O23203_10_235_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8864 1 181 1.20.1250.20
af_Q54UX4_30_219_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8841 4 184 1.20.1250.20
af_A0A1D6L8U4_23_213_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.884 1 181 1.20.1250.20
af_E9QCB4_45_231_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8816 5 173 1.20.1250.20
af_P37662_3_196_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8756 4 189 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A0A2GWU7-F1-model_v4 MFS transporter 0.9875 1 381 GO:0005886
GO:0022857
AF-A0A316EAN1-F1-model_v4 Putative MFS family arabinose efflux permease 0.9827 1 382 GO:0005886
GO:0022857
AF-A0A286IL63-F1-model_v4 Predicted arabinose efflux permease, MFS family 0.9745 1 390 GO:0005886
GO:0022857
AF-A0A1M6R2D8-F1-model_v4 Predicted arabinose efflux permease, MFS family 0.9732 1 390 GO:0005886
GO:0022857
AF-A0A1M6R2D8-F1-model_v4 Predicted arabinose efflux permease, MFS family 0.9707 1 390 GO:0005886
GO:0022857

Feature Viewer

pLDDT pTM Quality
88.62 0.88 High
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Predicted Structure (AlphaFold2)

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