F375898

General Info

Members Datasets Scaffolds Average Seq Length
269 147 269 259

Family's Representative Sequence

Representative Sequence 3300000545|CNXas_1002607|CNXas_10026072
Length 309
Sequence MRNNPSKANFILHQPFSREKGELSVTRPVHSAHSEQAIRWQTGDTIVIGSHRMLNVRGIRNGTEGLGELALLAREVFRAVFTGKIEVRDFIYQLYFIGVKSQSVVFITGAFTGMVLCAQTYFQFHRVQMDTGTLALVSVSMCSELGPVLTGLMVAGRVGAALAAELGTMKVTEQIDALRTLATHPVDYLVVPRVLATTLAMPVLTAASISLAIGSAWVLGVWFFKIDPTYAWANMLHYTLLSHVEIGLIKSIVYGAIISIISCYKGMQCGEGAEGVGRATTEAVVYSSITILISNFFLTLFLNNVLQTG

Samples

Sample ID Description Type Environment
1 2162886011 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v2 (version 2) Metagenome Rhizosphere
2 3300000545 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - CNX_Illumina_Assembled Metagenome Rhizosphere
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
11 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
12 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
13 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
14 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
15 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
16 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
17 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
18 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
19 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
20 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
21 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
22 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
23 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
24 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
25 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
26 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
27 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
28 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
29 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
30 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
31 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
32 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
33 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
34 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
35 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
36 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
38 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
39 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
41 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
42 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
43 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
44 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
45 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
46 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
47 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
48 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
66 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
67 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
68 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
69 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
70 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
71 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
72 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
73 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
74 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
75 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
76 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
77 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
78 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
79 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
80 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
81 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
82 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
83 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
84 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
85 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
86 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
87 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
88 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
89 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
90 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
91 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
92 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
93 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
94 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
95 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
96 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
97 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
98 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
99 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
100 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
101 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
102 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
103 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
104 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
105 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
106 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
107 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
108 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
109 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
110 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
111 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
112 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
113 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
114 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
115 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
116 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
117 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
118 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
119 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
120 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
121 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
122 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
123 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
124 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
125 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
126 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
127 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
128 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
129 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
130 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
133 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
138 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
139 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
140 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
141 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
142 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
143 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
144 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
145 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
146 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
147 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.37
Rhizosphere 99.26
Stem 0
Stem Tuber 0
Unclassified 0.37

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 MRS1b_contig_467566 2162886011 Bacteria 1183
2 CNXas_1002607 3300000545 Bacteria 1255
3 rootH1_10318673 3300003323 Bacteria 1205
4 Ga0065707_10006579 3300005295 Bacteria 2526
5 Ga0070670_100138480 3300005331 Bacteria 2104
6 Ga0070666_10023758 3300005335 Bacteria 3992
7 Ga0068868_100155787 3300005338 Bacteria 1884
8 Ga0070689_100036141 3300005340 Bacteria 3778
9 Ga0070668_100207008 3300005347 Bacteria 1612
10 Ga0070688_100008407 3300005365 Bacteria 5601
11 Ga0070688_100431475 3300005365 Unclassified 981
12 Ga0070714_100008351 3300005435 Bacteria 8078
13 Ga0070701_10006884 3300005438 Bacteria 4812
14 Ga0070711_100007458 3300005439 Bacteria 6653
15 Ga0070705_100329764 3300005440 Bacteria 1105
16 Ga0070700_100234689 3300005441 Bacteria 1307
17 Ga0070694_100014931 3300005444 Bacteria 4866
18 Ga0070681_10014601 3300005458 Bacteria 7816
19 Ga0068867_100089345 3300005459 Unclassified 2336
20 Ga0068867_100689553 3300005459 Bacteria 900
21 Ga0068853_100079281 3300005539 Bacteria 2872
22 Ga0070686_100021292 3300005544 Bacteria 3852
23 Ga0070686_100023196 3300005544 Bacteria 3706
24 Ga0070695_100135058 3300005545 Bacteria 1704
25 Ga0070704_100019516 3300005549 Unclassified 4356
26 Ga0068855_100049856 3300005563 Bacteria 4936
27 Ga0068855_100151764 3300005563 Bacteria 2634
28 Ga0068855_100245282 3300005563 Bacteria 1999
29 Ga0068857_100029363 3300005577 Unclassified 4852
30 Ga0068857_100120458 3300005577 Unclassified 2362
31 Ga0068856_100000904 3300005614 Bacteria 31737
32 Ga0068856_100025586 3300005614 Bacteria 5755
33 Ga0068859_100008493 3300005617 Bacteria 10393
34 Ga0068859_100065120 3300005617 Bacteria 3679
35 Ga0068864_100040331 3300005618 Bacteria 3994
36 Ga0068864_100155833 3300005618 Bacteria 2073
37 Ga0068863_100063791 3300005841 Bacteria 3484
38 Ga0068863_100139414 3300005841 Bacteria 2317
39 Ga0068860_100260242 3300005843 Bacteria 1691
40 Ga0097621_100008828 3300006237 Bacteria 7285
41 Ga0068871_100071274 3300006358 Bacteria 2858
42 Ga0075428_100004988 3300006844 Bacteria 14742
43 Ga0075428_100602441 3300006844 Bacteria 1173
44 Ga0075431_100028225 3300006847 Bacteria 5763
45 Ga0075431_100116628 3300006847 Bacteria 2756
46 Ga0075431_100323037 3300006847 Bacteria 1556
47 Ga0075433_10681988 3300006852 Unclassified 900
48 Ga0075434_100416739 3300006871 Unclassified 1364
49 Ga0075434_100701957 3300006871 Bacteria 1029
50 Ga0097620_100008493 3300006931 Bacteria 10393
51 Ga0097620_100065118 3300006931 Bacteria 3679
52 Ga0099794_10213415 3300007265 Bacteria 990
53 Ga0105240_10024046 3300009093 Bacteria 8045
54 Ga0105240_10175441 3300009093 Unclassified 2534
55 Ga0111539_10186354 3300009094 Bacteria 2423
56 Ga0114129_10849565 3300009147 Bacteria 1161
57 Ga0105242_10064582 3300009176 Unclassified 3018
58 Ga0105242_10235987 3300009176 Bacteria 1641
59 Ga0105238_10016945 3300009551 Bacteria 7394
60 Ga0105238_10042064 3300009551 Bacteria 4627
61 Ga0105238_10045115 3300009551 Bacteria 4453
62 Ga0105238_10118822 3300009551 Bacteria 2624
63 Ga0105238_10285919 3300009551 Bacteria 1631
64 Ga0163162_10766521 3300013306 Bacteria 1083
65 Ga0157372_10176672 3300013307 Bacteria 2471
66 Ga0157375_10000006 3300013308 Bacteria 384086
67 Ga0163163_10000147 3300014325 Bacteria 73154
68 Ga0163163_10017301 3300014325 Bacteria 6721
69 Ga0157376_10119738 3300014969 Bacteria 2331
70 Ga0157376_10475176 3300014969 Bacteria 1224
71 Ga0207680_10015379 3300025903 Bacteria 3992
72 Ga0207707_10011409 3300025912 Bacteria 7738
73 Ga0207695_10051144 3300025913 Bacteria 4341
74 Ga0207695_10156404 3300025913 Unclassified 2214
75 Ga0207663_10089316 3300025916 Bacteria 2040
76 Ga0207660_10412416 3300025917 Bacteria 1089
77 Ga0207694_10026754 3300025924 Bacteria 4391
78 Ga0207694_10053668 3300025924 Bacteria 3126
79 Ga0207650_10238161 3300025925 Bacteria 1470
80 Ga0207664_10002180 3300025929 Bacteria 12884
81 Ga0207686_10097405 3300025934 Bacteria 1956
82 Ga0207670_10015061 3300025936 Unclassified 4609
83 Ga0207670_10061648 3300025936 Bacteria 2560
84 Ga0207661_10404171 3300025944 Bacteria 1239
85 Ga0207667_10021948 3300025949 Bacteria 7066
86 Ga0207667_10085514 3300025949 Bacteria 3265
87 Ga0207667_10302655 3300025949 Bacteria 1634
88 Ga0207667_10381218 3300025949 Bacteria 1437
89 Ga0207639_10096312 3300026041 Bacteria 2380
90 Ga0207702_10000285 3300026078 Bacteria 58642
91 Ga0207702_10512077 3300026078 Bacteria 1171
92 Ga0207641_10080136 3300026088 Bacteria 2832
93 Ga0207676_10169203 3300026095 Bacteria 1902
94 Ga0207674_10039839 3300026116 Unclassified 4869
95 Ga0207674_10071300 3300026116 Bacteria 3491
96 Ga0207674_10143494 3300026116 Unclassified 2347
97 Ga0207674_10450867 3300026116 Bacteria 1243
98 Ga0265337_1000967 3300028556 Bacteria 15054
99 Ga0265337_1036040 3300028556 Unclassified 1446
100 Ga0265326_10006130 3300028558 Bacteria 3752
101 Ga0265326_10017046 3300028558 Bacteria 2098
102 Ga0265319_1000179 3300028563 Bacteria 48318
103 Ga0265319_1040090 3300028563 Bacteria 1584
104 Ga0265334_10013160 3300028573 Bacteria 3467
105 Ga0265334_10015380 3300028573 Bacteria 3178
106 Ga0265334_10019541 3300028573 Bacteria 2786
107 Ga0265334_10063935 3300028573 Bacteria 1383
108 Ga0265334_10076432 3300028573 Bacteria 1240
109 Ga0265318_10031920 3300028577 Bacteria 2041
110 Ga0265318_10083849 3300028577 Bacteria 1176
111 Ga0265336_10001693 3300028666 Bacteria 9709
112 Ga0265336_10024401 3300028666 Bacteria 1911
113 Ga0265336_10030294 3300028666 Bacteria 1685
114 Ga0265338_10000008 3300028800 Bacteria 481542
115 Ga0265338_10000459 3300028800 Bacteria 72730
116 Ga0265338_10000552 3300028800 Bacteria 65513
117 Ga0265338_10001116 3300028800 Bacteria 44580
118 Ga0265338_10003174 3300028800 Bacteria 23452
119 Ga0265338_10003274 3300028800 Bacteria 23014
120 Ga0265338_10004905 3300028800 Bacteria 17804
121 Ga0265338_10007929 3300028800 Bacteria 13008
122 Ga0265338_10009215 3300028800 Bacteria 11817
123 Ga0265338_10009340 3300028800 Bacteria 11717
124 Ga0265338_10013246 3300028800 Bacteria 9330
125 Ga0265338_10016284 3300028800 Bacteria 8101
126 Ga0265338_10017764 3300028800 Bacteria 7647
127 Ga0265338_10030371 3300028800 Bacteria 5325
128 Ga0265338_10031875 3300028800 Bacteria 5157
129 Ga0265338_10033675 3300028800 Bacteria 4966
130 Ga0265338_10034361 3300028800 Bacteria 4902
131 Ga0265338_10042023 3300028800 Bacteria 4265
132 Ga0265338_10048770 3300028800 Bacteria 3848
133 Ga0265338_10093330 3300028800 Bacteria 2480
134 Ga0265338_10135829 3300028800 Bacteria 1934
135 Ga0265338_10148516 3300028800 Bacteria 1824
136 Ga0265338_10344426 3300028800 Bacteria 1073
137 Ga0265324_10001522 3300029957 Bacteria 13058
138 Ga0265324_10002353 3300029957 Bacteria 9757
139 Ga0265324_10004301 3300029957 Bacteria 6495
140 Ga0265324_10006324 3300029957 Bacteria 4964
141 Ga0265324_10014118 3300029957 Bacteria 2964
142 Ga0265330_10141278 3300031235 Bacteria 1024
143 Ga0265320_10000984 3300031240 Bacteria 21193
144 Ga0265320_10015475 3300031240 Bacteria 4311
145 Ga0265320_10040474 3300031240 Bacteria 2323
146 Ga0265320_10111331 3300031240 Bacteria 1254
147 Ga0265325_10001373 3300031241 Bacteria 17189
148 Ga0265325_10046509 3300031241 Unclassified 2250
149 Ga0265340_10005826 3300031247 Bacteria 6823
150 Ga0265340_10055938 3300031247 Bacteria 1899
151 Ga0265339_10015287 3300031249 Bacteria 4604
152 Ga0265339_10018486 3300031249 Bacteria 4107
153 Ga0265327_10004498 3300031251 Bacteria 12312
154 Ga0265327_10100969 3300031251 Bacteria 1392
155 Ga0265316_10014561 3300031344 Bacteria 6914
156 Ga0265316_10081433 3300031344 Bacteria 2481
157 Ga0265313_10003061 3300031595 Bacteria 13878
158 Ga0265313_10003884 3300031595 Bacteria 11773
159 Ga0265314_10032991 3300031711 Bacteria 3803
160 Ga0265314_10124942 3300031711 Bacteria 1613
161 Ga0265314_10288924 3300031711 Bacteria 924
162 Ga0265342_10229320 3300031712 Bacteria 998
163 Ga0307405_10102941 3300031731 Unclassified 1919
164 Ga0307412_10102123 3300031911 Bacteria 2030
165 Ga0307411_10021586 3300032005 Unclassified 3772
166 Ga0373928_0000272 3300035084 Bacteria 10195
167 Ga0373944_0000355 3300035089 Bacteria 10370
168 Ga0373949_0000675 3300035090 Bacteria 11097
169 Ga0373951_0004250 3300035091 Bacteria 3408
170 Ga0373923_0140864 3300035111 Bacteria 1090
171 Ga0373932_0000003 3300035112 Bacteria 459351
172 Ga0373953_0039299 3300035117 Bacteria 1875
173 Ga0373946_0007748 3300035171 Bacteria 3938
174 Ga0373955_0126109 3300035172 Bacteria 1492
175 Ga0373962_0000063 3300035242 Bacteria 23607
176 Ga0373924_0090892 3300035410 Bacteria 1306
177 Ga0373931_0000011 3300035691 Bacteria 304643
178 Ga0373935_0012033 3300035692 Bacteria 5201
179 Ga0373935_0045190 3300035692 Bacteria 2778
180 Ga0373927_0007802 3300035695 Bacteria 7241
181 Ga0373927_0012991 3300035695 Bacteria 5538
182 Ga0373927_0215719 3300035695 Bacteria 1260
183 Ga0373933_0221997 3300035724 Unclassified 1213
184 Ga0373947_0054144 3300035725 Bacteria 2421
185 Ga0373937_0011618 3300036401 Bacteria 7730
186 Ga0373937_0126992 3300036401 Unclassified 2380
187 Ga0373937_0486927 3300036401 Bacteria 1172
188 Ga0373925_0004422 3300037068 Bacteria 10618
189 Ga0373925_0012097 3300037068 Bacteria 6247
190 Ga0373925_0074754 3300037068 Bacteria 2567
191 Ga0373925_0283135 3300037068 Bacteria 1335
192 Ga0395900_0563165 3300037418 Unclassified 1083
193 Ga0395905_0517814 3300037471 Bacteria 1093
194 Ga0395901_0209663 3300038443 Unclassified 2040
195 Ga0451577_0002655 3300042876 Bacteria 20946
196 Ga0451577_0607831 3300042876 Bacteria 992
197 Ga0453684_0016796 3300044712 Bacteria 11400
198 Ga0453684_0031943 3300044712 Bacteria 7382
199 Ga0451576_0089981 3300045051 Unclassified 3192
200 Ga0451576_0102975 3300045051 Bacteria 2970
201 Ga0451576_0126815 3300045051 Bacteria 2659
202 Ga0451576_0180823 3300045051 Bacteria 2202
203 Ga0451576_0212184 3300045051 Bacteria 2022
204 Ga0451576_0230399 3300045051 Unclassified 1935
205 Ga0451576_0245974 3300045051 Bacteria 1869
206 Ga0451576_0318520 3300045051 Unclassified 1627
207 Ga0451576_0440172 3300045051 Bacteria 1368
208 Ga0451576_0644399 3300045051 Bacteria 1113
209 Ga0451576_0755825 3300045051 Unclassified 1021
210 Ga0495592_0021032 3300046454 Bacteria 4962
211 Ga0495592_0189709 3300046454 Bacteria 1394
212 Ga0495618_0002726 3300046514 Bacteria 11251
213 Ga0495618_0005077 3300046514 Bacteria 8040
214 Ga0495628_0000198 3300046516 Bacteria 52820
215 Ga0495628_0130310 3300046516 Bacteria 1924
216 Ga0495630_0000339 3300046517 Bacteria 37123
217 Ga0495630_0016001 3300046517 Bacteria 5481
218 Ga0495630_0047654 3300046517 Bacteria 3206
219 Ga0495630_0121691 3300046517 Bacteria 1980
220 Ga0495666_0017837 3300046526 Bacteria 3536
221 Ga0495652_0023436 3300046529 Bacteria 5471
222 Ga0495640_0209388 3300046533 Bacteria 1233
223 Ga0495586_0000228 3300046535 Bacteria 37266
224 Ga0495586_0000671 3300046535 Bacteria 19516
225 Ga0495586_0003492 3300046535 Bacteria 8428
226 Ga0495645_0014179 3300046543 Bacteria 5651
227 Ga0495634_0004225 3300046642 Bacteria 11337
228 Ga0495634_0121400 3300046642 Bacteria 1673
229 Ga0495657_0056644 3300046675 Bacteria 2609
230 Ga0495599_0003445 3300046678 Bacteria 9260
231 Ga0495599_0323108 3300046678 Unclassified 928
232 Ga0495658_0037583 3300046683 Bacteria 2677
233 Ga0495624_0026498 3300046690 Bacteria 3799
234 Ga0495674_0001742 3300047319 Bacteria 21403
235 Ga0495674_0130093 3300047319 Bacteria 2121
236 Ga0495674_0212141 3300047319 Bacteria 1603
237 Ga0495676_0114285 3300047321 Bacteria 1975
238 Ga0495680_0009671 3300047322 Bacteria 8651
239 Ga0495675_0018102 3300047444 Bacteria 4468
240 Ga0495684_0030169 3300047471 Bacteria 4163
241 Ga0495684_0121365 3300047471 Bacteria 1968
242 Ga0495684_0205639 3300047471 Bacteria 1450
243 Ga0496115_0001004 3300048918 Bacteria 20478
244 Ga0501031_0003178 3300049568 Bacteria 10539
245 Ga0501031_0018223 3300049568 Bacteria 4570
246 Ga0501032_0012715 3300049569 Bacteria 6002
247 Ga0501033_0008797 3300049570 Bacteria 7805
248 Ga0501033_0019622 3300049570 Bacteria 5109
249 Ga0501037_0018831 3300049573 Bacteria 5087
250 Ga0501038_0522224 3300049574 Bacteria 906
251 Ga0501043_0020184 3300049579 Bacteria 5232
252 Ga0501047_0029545 3300049581 Bacteria 5285
253 Ga0501257_017924 3300049686 Unclassified 1649
254 Ga0501080_0292188 3300049742 Bacteria 1480
255 Ga0501080_0451576 3300049742 Bacteria 1152
256 Ga0501035_0011879 3300049822 Bacteria 8061
257 Ga0501035_0024398 3300049822 Bacteria 5546
258 Ga0501035_0262998 3300049822 Bacteria 1462
259 Ga0501044_0004160 3300049823 Bacteria 16259
260 Ga0501044_0007329 3300049823 Bacteria 12126
261 nmdc:mga05p37_762151_c1 3300050507 Bacteria 1065
262 nmdc:mga09592_136093_c1 3300050508 Bacteria 2116
263 nmdc:mga0qj67_203694_c1 3300050509 Bacteria 1607
264 nmdc:mga06r32_47337_c1 3300050510 Bacteria 4107
265 nmdc:mga06r32_506383_c1 3300050510 Bacteria 1184
266 nmdc:mga08y16_281280_c1 3300050511 Bacteria 1716
267 nmdc:mga08y16_470335_c1 3300050511 Bacteria 1280
268 nmdc:mga0n895_425890_c1 3300050512 Bacteria 1341
269 Ga0495601_0060382 3300053077 Bacteria 2406

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300005441 Ga0070700_100234689 Ga0070700_1002346892 250
2 3300005347 Ga0070668_100207008 Ga0070668_1002070082 251
3 3300006844 Ga0075428_100004988 Ga0075428_1000049883 251
4 3300006847 Ga0075431_100323037 Ga0075431_1003230372 251
5 3300006852 Ga0075433_10681988 Ga0075433_106819881 251
6 3300009176 Ga0105242_10235987 Ga0105242_102359871 251
7 3300050507 nmdc:mga05p37_762151_c1 nmdc:mga05p37_762151_c1_281_1036 251
8 3300050509 nmdc:mga0qj67_203694_c1 nmdc:mga0qj67_203694_c1_824_1579 251
9 3300050510 nmdc:mga06r32_506383_c1 nmdc:mga06r32_506383_c1_147_902 251
10 3300006358 Ga0068871_100071274 Ga0068871_1000712742 252
11 3300013306 Ga0163162_10766521 Ga0163162_107665212 252
12 3300014969 Ga0157376_10119738 Ga0157376_101197382 252
13 3300025934 Ga0207686_10097405 Ga0207686_100974051 252
14 3300028800 Ga0265338_10033675 Ga0265338_100336753 253
15 3300005331 Ga0070670_100138480 Ga0070670_1001384802 254
16 3300005614 Ga0068856_100000904 Ga0068856_1000009048 254
17 3300025925 Ga0207650_10238161 Ga0207650_102381612 254
18 3300026078 Ga0207702_10000285 Ga0207702_1000028522 254
19 3300029957 Ga0265324_10006324 Ga0265324_100063245 255
20 3300005843 Ga0068860_100260242 Ga0068860_1002602423 256
21 3300009093 Ga0105240_10175441 Ga0105240_101754413 256
22 3300028800 Ga0265338_10009340 Ga0265338_100093406 256
23 3300028800 Ga0265338_10016284 Ga0265338_100162842 256
24 3300031249 Ga0265339_10018486 Ga0265339_100184864 256
25 3300031711 Ga0265314_10124942 Ga0265314_101249422 256
26 3300031731 Ga0307405_10102941 Ga0307405_101029411 256
27 3300031911 Ga0307412_10102123 Ga0307412_101021232 256
28 3300032005 Ga0307411_10021586 Ga0307411_100215863 256
29 3300042876 Ga0451577_0607831 Ga0451577_0607831_43_816 256
30 3300049686 Ga0501257_017924 Ga0501257_017924_311_1081 256
31 3300050511 nmdc:mga08y16_470335_c1 nmdc:mga08y16_470335_c1_163_933 256
32 3300005295 Ga0065707_10006579 Ga0065707_100065792 257
33 3300005458 Ga0070681_10014601 Ga0070681_100146013 257
34 3300005539 Ga0068853_100079281 Ga0068853_1000792814 257
35 3300005544 Ga0070686_100023196 Ga0070686_1000231964 257
36 3300005545 Ga0070695_100135058 Ga0070695_1001350582 257
37 3300005563 Ga0068855_100245282 Ga0068855_1002452822 257
38 3300005577 Ga0068857_100029363 Ga0068857_1000293632 257
39 3300006847 Ga0075431_100028225 Ga0075431_1000282253 257
40 3300006847 Ga0075431_100116628 Ga0075431_1001166282 257
41 3300006871 Ga0075434_100701957 Ga0075434_1007019572 257
42 3300009093 Ga0105240_10024046 Ga0105240_100240467 257
43 3300009094 Ga0111539_10186354 Ga0111539_101863542 257
44 3300014969 Ga0157376_10475176 Ga0157376_104751761 257
45 3300025912 Ga0207707_10011409 Ga0207707_100114097 257
46 3300025913 Ga0207695_10051144 Ga0207695_100511444 257
47 3300025913 Ga0207695_10156404 Ga0207695_101564043 257
48 3300025949 Ga0207667_10302655 Ga0207667_103026552 257
49 3300026041 Ga0207639_10096312 Ga0207639_100963121 257
50 3300026116 Ga0207674_10039839 Ga0207674_100398396 257
51 3300028558 Ga0265326_10006130 Ga0265326_100061302 257
52 3300028800 Ga0265338_10000008 Ga0265338_10000008444 257
53 3300028800 Ga0265338_10000552 Ga0265338_1000055227 257
54 3300028800 Ga0265338_10048770 Ga0265338_100487703 257
55 3300029957 Ga0265324_10002353 Ga0265324_1000235314 257
56 3300031249 Ga0265339_10015287 Ga0265339_100152874 257
57 3300031251 Ga0265327_10004498 Ga0265327_100044984 257
58 3300031712 Ga0265342_10229320 Ga0265342_102293202 257
59 3300035692 Ga0373935_0012033 Ga0373935_0012033_2142_2918 257
60 3300035695 Ga0373927_0007802 Ga0373927_0007802_3373_4149 257
61 3300035725 Ga0373947_0054144 Ga0373947_0054144_739_1515 257
62 3300036401 Ga0373937_0126992 Ga0373937_0126992_1286_2092 257
63 3300037068 Ga0373925_0074754 Ga0373925_0074754_735_1511 257
64 3300037418 Ga0395900_0563165 Ga0395900_0563165_138_911 257
65 3300037471 Ga0395905_0517814 Ga0395905_0517814_251_1024 257
66 3300038443 Ga0395901_0209663 Ga0395901_0209663_203_976 257
67 3300044712 Ga0453684_0016796 Ga0453684_0016796_7793_8569 257
68 3300045051 Ga0451576_0230399 Ga0451576_0230399_819_1595 257
69 3300045051 Ga0451576_0644399 Ga0451576_0644399_15_791 257
70 3300045051 Ga0451576_0755825 Ga0451576_0755825_135_911 257
71 3300046517 Ga0495630_0000339 Ga0495630_0000339_10897_11673 257
72 3300046517 Ga0495630_0016001 Ga0495630_0016001_294_1070 257
73 3300046526 Ga0495666_0017837 Ga0495666_0017837_326_1102 257
74 3300046535 Ga0495586_0000228 Ga0495586_0000228_25594_26370 257
75 3300046675 Ga0495657_0056644 Ga0495657_0056644_318_1094 257
76 3300046683 Ga0495658_0037583 Ga0495658_0037583_808_1584 257
77 3300046690 Ga0495624_0026498 Ga0495624_0026498_448_1224 257
78 3300047319 Ga0495674_0001742 Ga0495674_0001742_4159_4935 257
79 3300047321 Ga0495676_0114285 Ga0495676_0114285_1024_1800 257
80 3300050510 nmdc:mga06r32_47337_c1 nmdc:mga06r32_47337_c1_2323_3111 257
81 3300050511 nmdc:mga08y16_281280_c1 nmdc:mga08y16_281280_c1_219_995 257
82 3300003323 rootH1_10318673 rootH1_103186732 258
83 3300005335 Ga0070666_10023758 Ga0070666_100237582 258
84 3300005338 Ga0068868_100155787 Ga0068868_1001557871 258
85 3300005340 Ga0070689_100036141 Ga0070689_1000361412 258
86 3300005365 Ga0070688_100431475 Ga0070688_1004314751 258
87 3300005435 Ga0070714_100008351 Ga0070714_1000083516 258
88 3300005438 Ga0070701_10006884 Ga0070701_100068842 258
89 3300005439 Ga0070711_100007458 Ga0070711_1000074587 258
90 3300005440 Ga0070705_100329764 Ga0070705_1003297641 258
91 3300005444 Ga0070694_100014931 Ga0070694_1000149313 258
92 3300005459 Ga0068867_100089345 Ga0068867_1000893451 258
93 3300005459 Ga0068867_100689553 Ga0068867_1006895531 258
94 3300005544 Ga0070686_100021292 Ga0070686_1000212924 258
95 3300005549 Ga0070704_100019516 Ga0070704_1000195165 258
96 3300005563 Ga0068855_100049856 Ga0068855_1000498564 258
97 3300005563 Ga0068855_100151764 Ga0068855_1001517642 258
98 3300005614 Ga0068856_100025586 Ga0068856_1000255866 258
99 3300005617 Ga0068859_100008493 Ga0068859_1000084939 258
100 3300005617 Ga0068859_100065120 Ga0068859_1000651202 258
101 3300005618 Ga0068864_100040331 Ga0068864_1000403314 258
102 3300005618 Ga0068864_100155833 Ga0068864_1001558333 258
103 3300005841 Ga0068863_100063791 Ga0068863_1000637912 258
104 3300005841 Ga0068863_100139414 Ga0068863_1001394141 258
105 3300006237 Ga0097621_100008828 Ga0097621_1000088288 258
106 3300006844 Ga0075428_100602441 Ga0075428_1006024412 258
107 3300006871 Ga0075434_100416739 Ga0075434_1004167392 258
108 3300006931 Ga0097620_100008493 Ga0097620_1000084935 258
109 3300006931 Ga0097620_100065118 Ga0097620_1000651182 258
110 3300007265 Ga0099794_10213415 Ga0099794_102134151 258
111 3300009176 Ga0105242_10064582 Ga0105242_100645824 258
112 3300009551 Ga0105238_10016945 Ga0105238_100169452 258
113 3300009551 Ga0105238_10042064 Ga0105238_100420643 258
114 3300009551 Ga0105238_10045115 Ga0105238_100451153 258
115 3300009551 Ga0105238_10118822 Ga0105238_101188222 258
116 3300009551 Ga0105238_10285919 Ga0105238_102859191 258
117 3300013307 Ga0157372_10176672 Ga0157372_101766722 258
118 3300013308 Ga0157375_10000006 Ga0157375_10000006318 258
119 3300014325 Ga0163163_10000147 Ga0163163_1000014710 258
120 3300014325 Ga0163163_10017301 Ga0163163_100173012 258
121 3300025903 Ga0207680_10015379 Ga0207680_100153792 258
122 3300025916 Ga0207663_10089316 Ga0207663_100893162 258
123 3300025924 Ga0207694_10026754 Ga0207694_100267543 258
124 3300025924 Ga0207694_10053668 Ga0207694_100536682 258
125 3300025929 Ga0207664_10002180 Ga0207664_100021809 258
126 3300025936 Ga0207670_10061648 Ga0207670_100616482 258
127 3300025944 Ga0207661_10404171 Ga0207661_104041712 258
128 3300025949 Ga0207667_10021948 Ga0207667_100219486 258
129 3300025949 Ga0207667_10085514 Ga0207667_100855143 258
130 3300025949 Ga0207667_10381218 Ga0207667_103812182 258
131 3300026078 Ga0207702_10512077 Ga0207702_105120771 258
132 3300026088 Ga0207641_10080136 Ga0207641_100801363 258
133 3300026095 Ga0207676_10169203 Ga0207676_101692033 258
134 3300026116 Ga0207674_10071300 Ga0207674_100713001 258
135 3300026116 Ga0207674_10450867 Ga0207674_104508672 258
136 3300028556 Ga0265337_1036040 Ga0265337_10360402 258
137 3300028558 Ga0265326_10017046 Ga0265326_100170461 258
138 3300028563 Ga0265319_1000179 Ga0265319_100017921 258
139 3300028563 Ga0265319_1040090 Ga0265319_10400902 258
140 3300028573 Ga0265334_10013160 Ga0265334_100131602 258
141 3300028573 Ga0265334_10015380 Ga0265334_100153802 258
142 3300028573 Ga0265334_10019541 Ga0265334_100195413 258
143 3300028573 Ga0265334_10063935 Ga0265334_100639352 258
144 3300028573 Ga0265334_10076432 Ga0265334_100764322 258
145 3300028577 Ga0265318_10031920 Ga0265318_100319203 258
146 3300028577 Ga0265318_10083849 Ga0265318_100838492 258
147 3300028666 Ga0265336_10024401 Ga0265336_100244012 258
148 3300028666 Ga0265336_10030294 Ga0265336_100302941 258
149 3300028800 Ga0265338_10001116 Ga0265338_1000111654 258
150 3300028800 Ga0265338_10003174 Ga0265338_1000317416 258
151 3300028800 Ga0265338_10004905 Ga0265338_100049056 258
152 3300028800 Ga0265338_10009215 Ga0265338_100092157 258
153 3300028800 Ga0265338_10017764 Ga0265338_100177648 258
154 3300028800 Ga0265338_10030371 Ga0265338_100303712 258
155 3300028800 Ga0265338_10031875 Ga0265338_100318755 258
156 3300028800 Ga0265338_10034361 Ga0265338_100343613 258
157 3300028800 Ga0265338_10042023 Ga0265338_100420234 258
158 3300028800 Ga0265338_10093330 Ga0265338_100933303 258
159 3300028800 Ga0265338_10135829 Ga0265338_101358293 258
160 3300028800 Ga0265338_10148516 Ga0265338_101485162 258
161 3300028800 Ga0265338_10344426 Ga0265338_103444262 258
162 3300029957 Ga0265324_10001522 Ga0265324_1000152211 258
163 3300029957 Ga0265324_10004301 Ga0265324_100043015 258
164 3300029957 Ga0265324_10014118 Ga0265324_100141181 258
165 3300031235 Ga0265330_10141278 Ga0265330_101412781 258
166 3300031240 Ga0265320_10015475 Ga0265320_100154753 258
167 3300031240 Ga0265320_10040474 Ga0265320_100404744 258
168 3300031240 Ga0265320_10111331 Ga0265320_101113311 258
169 3300031241 Ga0265325_10001373 Ga0265325_1000137314 258
170 3300031241 Ga0265325_10046509 Ga0265325_100465092 258
171 3300031247 Ga0265340_10005826 Ga0265340_100058262 258
172 3300031247 Ga0265340_10055938 Ga0265340_100559382 258
173 3300031251 Ga0265327_10100969 Ga0265327_101009692 258
174 3300031344 Ga0265316_10014561 Ga0265316_100145612 258
175 3300031344 Ga0265316_10081433 Ga0265316_100814334 258
176 3300031595 Ga0265313_10003061 Ga0265313_100030612 258
177 3300031595 Ga0265313_10003884 Ga0265313_100038844 258
178 3300031711 Ga0265314_10032991 Ga0265314_100329913 258
179 3300031711 Ga0265314_10288924 Ga0265314_102889241 258
180 3300035084 Ga0373928_0000272 Ga0373928_0000272_6030_6812 258
181 3300035089 Ga0373944_0000355 Ga0373944_0000355_3835_4617 258
182 3300035090 Ga0373949_0000675 Ga0373949_0000675_6499_7281 258
183 3300035091 Ga0373951_0004250 Ga0373951_0004250_2598_3380 258
184 3300035111 Ga0373923_0140864 Ga0373923_0140864_43_822 258
185 3300035112 Ga0373932_0000003 Ga0373932_0000003_452743_453525 258
186 3300035117 Ga0373953_0039299 Ga0373953_0039299_347_1126 258
187 3300035171 Ga0373946_0007748 Ga0373946_0007748_2185_2967 258
188 3300035172 Ga0373955_0126109 Ga0373955_0126109_232_1011 258
189 3300035242 Ga0373962_0000063 Ga0373962_0000063_17628_18410 258
190 3300035410 Ga0373924_0090892 Ga0373924_0090892_77_856 258
191 3300035691 Ga0373931_0000011 Ga0373931_0000011_128739_129521 258
192 3300035692 Ga0373935_0045190 Ga0373935_0045190_1677_2459 258
193 3300035695 Ga0373927_0012991 Ga0373927_0012991_3520_4302 258
194 3300035695 Ga0373927_0215719 Ga0373927_0215719_103_888 258
195 3300035724 Ga0373933_0221997 Ga0373933_0221997_255_1034 258
196 3300036401 Ga0373937_0011618 Ga0373937_0011618_6870_7649 258
197 3300036401 Ga0373937_0486927 Ga0373937_0486927_82_861 258
198 3300037068 Ga0373925_0004422 Ga0373925_0004422_5939_6721 258
199 3300037068 Ga0373925_0012097 Ga0373925_0012097_1720_2505 258
200 3300037068 Ga0373925_0283135 Ga0373925_0283135_522_1307 258
201 3300042876 Ga0451577_0002655 Ga0451577_0002655_12903_13682 258
202 3300044712 Ga0453684_0031943 Ga0453684_0031943_3205_3984 258
203 3300045051 Ga0451576_0089981 Ga0451576_0089981_679_1458 258
204 3300045051 Ga0451576_0102975 Ga0451576_0102975_613_1392 258
205 3300045051 Ga0451576_0126815 Ga0451576_0126815_809_1588 258
206 3300045051 Ga0451576_0212184 Ga0451576_0212184_1022_1801 258
207 3300045051 Ga0451576_0245974 Ga0451576_0245974_433_1215 258
208 3300045051 Ga0451576_0318520 Ga0451576_0318520_90_869 258
209 3300045051 Ga0451576_0440172 Ga0451576_0440172_286_1065 258
210 3300046454 Ga0495592_0021032 Ga0495592_0021032_1002_1781 258
211 3300046454 Ga0495592_0189709 Ga0495592_0189709_59_838 258
212 3300046514 Ga0495618_0002726 Ga0495618_0002726_9330_10112 258
213 3300046514 Ga0495618_0005077 Ga0495618_0005077_6308_7087 258
214 3300046516 Ga0495628_0000198 Ga0495628_0000198_24175_24957 258
215 3300046516 Ga0495628_0130310 Ga0495628_0130310_990_1769 258
216 3300046517 Ga0495630_0047654 Ga0495630_0047654_425_1207 258
217 3300046517 Ga0495630_0121691 Ga0495630_0121691_267_1046 258
218 3300046529 Ga0495652_0023436 Ga0495652_0023436_2861_3643 258
219 3300046533 Ga0495640_0209388 Ga0495640_0209388_293_1075 258
220 3300046535 Ga0495586_0000671 Ga0495586_0000671_16731_17513 258
221 3300046535 Ga0495586_0003492 Ga0495586_0003492_2074_2853 258
222 3300046543 Ga0495645_0014179 Ga0495645_0014179_982_1761 258
223 3300046642 Ga0495634_0004225 Ga0495634_0004225_1680_2459 258
224 3300046642 Ga0495634_0121400 Ga0495634_0121400_457_1236 258
225 3300046678 Ga0495599_0003445 Ga0495599_0003445_1437_2219 258
226 3300046678 Ga0495599_0323108 Ga0495599_0323108_87_866 258
227 3300047319 Ga0495674_0130093 Ga0495674_0130093_669_1448 258
228 3300047319 Ga0495674_0212141 Ga0495674_0212141_151_933 258
229 3300047322 Ga0495680_0009671 Ga0495680_0009671_6632_7411 258
230 3300047444 Ga0495675_0018102 Ga0495675_0018102_2670_3449 258
231 3300047471 Ga0495684_0030169 Ga0495684_0030169_1459_2238 258
232 3300047471 Ga0495684_0121365 Ga0495684_0121365_698_1477 258
233 3300047471 Ga0495684_0205639 Ga0495684_0205639_388_1167 258
234 3300048918 Ga0496115_0001004 Ga0496115_0001004_6541_7320 258
235 3300049568 Ga0501031_0003178 Ga0501031_0003178_105_887 258
236 3300049568 Ga0501031_0018223 Ga0501031_0018223_3492_4277 258
237 3300049569 Ga0501032_0012715 Ga0501032_0012715_4792_5577 258
238 3300049570 Ga0501033_0008797 Ga0501033_0008797_6903_7685 258
239 3300049570 Ga0501033_0019622 Ga0501033_0019622_3135_3920 258
240 3300049573 Ga0501037_0018831 Ga0501037_0018831_1010_1795 258
241 3300049574 Ga0501038_0522224 Ga0501038_0522224_110_889 258
242 3300049579 Ga0501043_0020184 Ga0501043_0020184_2455_3240 258
243 3300049581 Ga0501047_0029545 Ga0501047_0029545_808_1593 258
244 3300049742 Ga0501080_0292188 Ga0501080_0292188_266_1051 258
245 3300049742 Ga0501080_0451576 Ga0501080_0451576_314_1099 258
246 3300049822 Ga0501035_0011879 Ga0501035_0011879_3969_4754 258
247 3300049822 Ga0501035_0024398 Ga0501035_0024398_4588_5370 258
248 3300049822 Ga0501035_0262998 Ga0501035_0262998_251_1036 258
249 3300049823 Ga0501044_0004160 Ga0501044_0004160_2464_3249 258
250 3300049823 Ga0501044_0007329 Ga0501044_0007329_10546_11328 258
251 3300050512 nmdc:mga0n895_425890_c1 nmdc:mga0n895_425890_c1_480_1259 258
252 3300053077 Ga0495601_0060382 Ga0495601_0060382_737_1516 258
253 2162886011 MRS1b_contig_467566 MRS1b_0941.00003040 259
254 3300000545 CNXas_1002607 CNXas_10026072 259
255 3300005365 Ga0070688_100008407 Ga0070688_1000084074 259
256 3300005577 Ga0068857_100120458 Ga0068857_1001204583 259
257 3300009147 Ga0114129_10849565 Ga0114129_108495652 259
258 3300025917 Ga0207660_10412416 Ga0207660_104124161 259
259 3300025936 Ga0207670_10015061 Ga0207670_100150612 259
260 3300026116 Ga0207674_10143494 Ga0207674_101434941 259
261 3300028556 Ga0265337_1000967 Ga0265337_10009676 259
262 3300028666 Ga0265336_10001693 Ga0265336_100016936 259
263 3300028800 Ga0265338_10000459 Ga0265338_1000045958 259
264 3300028800 Ga0265338_10003274 Ga0265338_100032749 259
265 3300028800 Ga0265338_10007929 Ga0265338_100079292 259
266 3300028800 Ga0265338_10013246 Ga0265338_100132466 259
267 3300031240 Ga0265320_10000984 Ga0265320_100009847 259
268 3300045051 Ga0451576_0180823 Ga0451576_0180823_1337_2116 259
269 3300050508 nmdc:mga09592_136093_c1 nmdc:mga09592_136093_c1_756_1535 259

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02405

MlaE

Permease MlaE

90

301

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
8fef-assembly1.cif.gz_J structure of mce1 transporter from mycobacterium smegmatis (map0) 0.9588 12 252
8fee-assembly1.cif.gz_I structure of mce1 transporter from mycobacterium smegmatis in the absence of lucb (map2) 0.9411 7 255
7d06-assembly1.cif.gz_D cryo em structure of the nucleotide free acinetobacter mlafedb complex 0.9383 1 252
7ch8-assembly1.cif.gz_H cryo-em structure of p.aeruginosa mlafebd with adp-v 0.9357 7 251
7ch9-assembly1.cif.gz_H cryo-em structure of p.aeruginosa mlafebd 0.934 7 251
ID Description Score Start End Superfamily
af_A0A1D6EJ30_351_510_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.4716 58 242 1.20.1250.20
af_A0A1D6EJ30_351_510_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.4655 58 242 1.20.1250.20
af_K7MLI2_277_432_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.4547 108 253 1.20.1250.20
3rhwA02 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;Neurotransmitter-gated ion-channel transmembrane domain 0.4391 108 257 1.20.58.390
4tnwA02 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;Neurotransmitter-gated ion-channel transmembrane domain 0.4213 108 259 1.20.58.390
ID Description Score Start End GO Terms
AF-T0RUM6-F1-model_v4 ABC transporter permease 0.9936 47 256 GO:0005548
GO:0043190
AF-A0A521SLB6-F1-model_v4 ABC transporter permease 0.9916 2 252 GO:0005548
GO:0043190
AF-A0A661RKZ9-F1-model_v4 ABC transporter permease 0.9915 2 252 GO:0005548
GO:0043190
AF-A0A4P1S048-F1-model_v4 ABC transporter permease 0.9913 1 252 GO:0005548
GO:0043190
AF-A0A800BPT4-F1-model_v4 ABC transporter permease 0.9908 2 252 GO:0005548
GO:0043190

Feature Viewer

pLDDT pTM Quality
87.59 0.83 High
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Predicted Structure (AlphaFold2)

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