F375960

General Info

Members Datasets Scaffolds Average Seq Length
269 222 140 340

Family's Representative Sequence

Representative Sequence 3300005327|Ga0070658_10284820|Ga0070658_102848202
Length 331
Sequence MSGDMAPLAMTMGDPAGIGPELALAAWRDRAPDAPFVVFAAPDLLAAAARRIGLTAPIIETDPPGARGAFLKGLPVVPLRNGVEDAPGRPSAANAAATIESIARAVEAVRQGEARALVTNPIAKATLYEGGFKYPGHTEYLGALAEAWGAPTFPVMMIWSETLAVVPVTIHIPLAEAPKALTTELIMRTARVVDRDLRTRFGVARPRLAVAGLNPHAGEGGAMGSEEITIIKPAIAGLRAEGLDIVGPLPADTMFHPRARARYDAALTMYHDQGLIPVKTLAFDEGVNVTLGLPFVRTSPDHGTAFDIAGKGMANPASLIAALRLADRLTR

Samples

Sample ID Description Type Environment
1 2510917030 Rhizobium sp. CF142 Isolate Rhizosphere
2 2513237088 Rhizobium mesoamericanum STM6155 Isolate Nodule
3 2513237090 Mesorhizobium sp. WSM3224 Isolate Nodule
4 2513237305 Mesorhizobium amorphae CCNWGS0123 Isolate Nodule
5 2534681786 Brucella suis 92/29 Isolate Unclassified
6 2582581307 Rhizobium sp. YR060 Isolate Rhizosphere
7 2585427609 Agrobacterium rhizogenes CF263 Isolate Rhizosphere
8 2585428125 Agrobacterium rhizogenes CF262 Isolate Rhizosphere
9 2599185301 Mesorhizobium sp. NFR06 Isolate Rhizoplane
10 2600254933 Rhizobium sp. NFR12 Isolate Rhizoplane
11 2643221551 Mesorhizobium sp. Root1471 Isolate Unclassified
12 2643221555 Mesorhizobium sp. Root554 Isolate Unclassified
13 2693429783 Mesorhizobium sp. LCM 4577 Isolate Rhizosphere
14 2693429784 Mesorhizobium sp. LCM 4576 Isolate Rhizosphere
15 2721755686 Mesorhizobium amorphae CCNWGS0123 Isolate Nodule
16 2751185800 Brucella pituitosa AA2 Isolate Unclassified
17 2757320392 Phyllobacterium leguminum ORS 1419 Isolate Nodule
18 2758568016 [Ochrobactrum] quorumnocens A44 Isolate Rhizosphere
19 2791355091 Sinorhizobium sp. FG01 Isolate Nodule
20 2791355092 Sinorhizobium sp. NG07B Isolate Nodule
21 2791355253 Rhizobium rhizosphaerae RD15 Isolate Rhizosphere
22 2838736955 Rhizobium cellulosilyticum SEMIA 448 Isolate Nodule
23 2841840854 Rhizobium cellulosilyticum SEMIA 444 Isolate Nodule
24 2842140634 Rhizobium cellulosilyticum SEMIA 452 Isolate Nodule
25 2847670302 Mesorhizobium sp. M3A.F.Ca.ET.080.04.2.1 Isolate Nodule
26 2847686936 Mesorhizobium sp. M1A.F.Ca.IN.022.06.1.1 Isolate Nodule
27 2854911287 Brucella lupini LUP21 Isolate Unclassified
28 2856314179 Mesorhizobium sp. M3A.F.Ca.ET.175.01.1.1 Isolate Nodule
29 2856349417 Mesorhizobium sp. M4A.F.Ca.ET.090.04.2.1 Isolate Nodule
30 2856364286 Mesorhizobium sp. M00.F.Ca.ET.151.01.1.1 Isolate Nodule
31 2857349434 Mesorhizobium sp. M2E.F.Ca.ET.166.01.1.1 Isolate Nodule
32 2857531043 Neorhizobium sp. R-72160 Isolate Unclassified
33 2869285874 Mesorhizobium sp. M2D.F.Ca.ET.147.01.1.1 Isolate Nodule
34 2871429161 Mesorhizobium sp. M2D.F.Ca.ET.225.01.1.1 Isolate Nodule
35 2871444079 Mesorhizobium sp. M1A.F.Ca.IN.020.06.1.1 Isolate Nodule
36 2871488783 Mesorhizobium sp. M4B.F.Ca.ET.203.01.1.1 Isolate Nodule
37 2871495908 Mesorhizobium sp. M1C.F.Ca.ET.193.01.1.1 Isolate Nodule
38 2874102143 Mesorhizobium sp. M1A.F.Ca.IN.022.04.1.1 Isolate Nodule
39 2874146452 Mesorhizobium sp. M2D.F.Ca.ET.160.01.1.1 Isolate Nodule
40 2874155637 Mesorhizobium sp. M2D.F.Ca.ET.224.01.1.1 Isolate Nodule
41 2876369609 Mesorhizobium sp. USDA-HM6 Isolate Unclassified
42 2876392853 Mesorhizobium sp. M1D.F.Ca.ET.234.01.1.1 Isolate Nodule
43 2876413966 Mesorhizobium sp. M2D.F.Ca.ET.233.01.1.1 Isolate Nodule
44 2878035449 Mesorhizobium sp. M3A.F.Ca.ET.201.01.1.1 Isolate Nodule
45 2878745973 Mesorhizobium sp. M2D.F.Ca.ET.226.01.1.1 Isolate Nodule
46 2878753008 Mesorhizobium sp. M4B.F.Ca.ET.150.01.1.1 Isolate Nodule
47 2878760144 Mesorhizobium sp. M1C.F.Ca.ET.192.01.1.1 Isolate Nodule
48 2878767105 Mesorhizobium sp. M1C.F.Ca.ET.144.01.1.1 Isolate Nodule
49 2881147464 Mesorhizobium sp. M1B.F.Ca.ET.045.04.1.1 Isolate Nodule
50 2881155292 Mesorhizobium sp. M4B.F.Ca.ET.058.02.1.1 Isolate Nodule
51 2881161766 Mesorhizobium sp. M1D.F.Ca.ET.043.01.1.1 Isolate Nodule
52 2881845957 Mesorhizobium sp. M4B.F.Ca.ET.019.03.1.1 Isolate Nodule
53 2881853255 Mesorhizobium sp. M4A.F.Ca.ET.020.02.1.1 Isolate Nodule
54 2881861095 Mesorhizobium sp. M4B.F.Ca.ET.049.02.1.2 Isolate Nodule
55 2882632389 Mesorhizobium waimense ICMP19557 Isolate Unclassified
56 2882912400 Mesorhizobium sp. M4B.F.Ca.ET.013.02.1.1 Isolate Nodule
57 2885305155 Mesorhizobium sp. M1E.F.Ca.ET.045.02.1.1 Isolate Nodule
58 2885318864 Mesorhizobium sp. M4B.F.Ca.ET.017.02.2.1 Isolate Nodule
59 2885326080 Mesorhizobium sp. M1E.F.Ca.ET.041.01.1.1 Isolate Nodule
60 2885350715 Mesorhizobium sp. M4A.F.Ca.ET.022.05.2.1 Isolate Nodule
61 2889010040 Mesorhizobium sp. M2A.F.Ca.ET.043.05.1.1 Isolate Nodule
62 2889016732 Mesorhizobium sp. M2A.F.Ca.ET.043.02.1.1 Isolate Nodule
63 2899803654 Agrobacterium sp. a22-2 Isolate Unclassified
64 2903492973 Mesorhizobium sp. M00.F.Ca.ET.220.01.1.1 Isolate Nodule
65 2903540706 Mesorhizobium sp. M1C.F.Ca.ET.212.01.1.1 Isolate Nodule
66 2904659560 Mesorhizobium sp. M1D.F.Ca.ET.184.01.1.1 Isolate Nodule
67 2906308376 Mesorhizobium sp. M2D.F.Ca.ET.185.01.1.1 Isolate Nodule
68 2906321335 Mesorhizobium sp. M2D.F.Ca.ET.206.01.1.1 Isolate Nodule
69 2906328253 Mesorhizobium sp. M1A.T.Ca.IN.004.03.1.1 Isolate Nodule
70 2906414383 Mesorhizobium sp. M3A.F.Ca.ET.174.01.1.1 Isolate Nodule
71 2915650412 Ochrobactrum sp. CM-21-5 Isolate Rhizosphere
72 2922130491 Mesorhizobium sp. M00.F.Ca.ET.038.03.1.1 Isolate Nodule
73 2922158528 Mesorhizobium sp. M1A.F.Ca.IN.022.05.2.1 Isolate Nodule
74 2924726620 Mesorhizobium sp. M1A.F.Ca.IN.020.03.2.1 Isolate Nodule
75 2924762789 Mesorhizobium sp. WSM4303 Isolate Unclassified
76 2924784321 Mesorhizobium sp. M4B.F.Ca.ET.143.01.1.1 Isolate Nodule
77 2937813078 Mesorhizobium sp. M2D.F.Ca.ET.223.01.1.1 Isolate Nodule
78 2937843397 Mesorhizobium xinjiangense lm94 Isolate Rhizosphere
79 2937891427 Mesorhizobium sp. M1A.F.Ca.IN.022.07.1.1 Isolate Nodule
80 2937994558 Mesorhizobium sp. M1C.F.Ca.ET.187.01.1.1 Isolate Nodule
81 2958041894 Mesorhizobium sp. M00.F.Ca.ET.149.01.1.1 Isolate Nodule
82 2958100919 Mesorhizobium sp. M2A.F.Ca.ET.015.02.1.1 Isolate Nodule
83 2958115193 Mesorhizobium sp. M00.F.Ca.ET.217.01.1.1 Isolate Nodule
84 2958130278 Mesorhizobium sp. M2D.F.Ca.ET.148.01.1.1 Isolate Nodule
85 2958165035 Mesorhizobium sp. M1C.F.Ca.ET.196.01.1.1 Isolate Nodule
86 2958172287 Mesorhizobium sp. M2A.F.Ca.ET.029.05.1.1 Isolate Nodule
87 2958179912 Mesorhizobium sp. M2D.F.Ca.ET.171.01.1.1 Isolate Nodule
88 2961077736 Mesorhizobium sp. M2D.F.Ca.ET.178.01.1.1 Isolate Nodule
89 2961114664 Mesorhizobium sp. M1D.F.Ca.ET.231.01.1.1 Isolate Nodule
90 2961163497 Mesorhizobium sp. M1C.F.Ca.ET.176.01.1.1 Isolate Nodule
91 2961170736 Mesorhizobium sp. M4B.F.Ca.ET.200.01.1.1 Isolate Nodule
92 2965018300 Mesorhizobium sp. M1C.F.Ca.ET.188.01.1.1 Isolate Nodule
93 2967996073 Mesorhizobium sp. M4B.F.Ca.ET.169.01.1.1 Isolate Nodule
94 2968003550 Mesorhizobium sp. M4B.F.Ca.ET.215.01.1.1 Isolate Nodule
95 2968091066 Mesorhizobium sp. AA23 Isolate Unclassified
96 2968097103 Mesorhizobium sp. M1A.F.Ca.IN.020.30.1.1 Isolate Nodule
97 2968110612 Mesorhizobium sp. M1D.F.Ca.ET.183.01.1.1 Isolate Nodule
98 2968117919 Mesorhizobium atlanticum CNPSo 3140 Isolate Unclassified
99 2968128360 Mesorhizobium sp. WSM3873 Isolate Unclassified
100 2968171901 Mesorhizobium sp. M1C.F.Ca.ET.189.01.1.1 Isolate Nodule
101 2970503327 Mesorhizobium sp. M4B.F.Ca.ET.190.01.1.1 Isolate Nodule
102 2970554993 Mesorhizobium sp. M1C.F.Ca.ET.210.01.1.1 Isolate Nodule
103 2977821940 Mesorhizobium sp. M4B.F.Ca.ET.214.01.1.1 Isolate Nodule
104 2977843712 Mesorhizobium sp. M2D.F.Ca.ET.140.01.1.1 Isolate Nodule
105 2977858184 Mesorhizobium sp. M1A.F.Ca.IN.020.03.1.1 Isolate Nodule
106 2977864932 Mesorhizobium tamadayense DSM 28320 Isolate Nodule
107 2977942078 Mesorhizobium sp. M2E.F.Ca.ET.209.01.1.1 Isolate Nodule
108 2977971508 Mesorhizobium sp. M2A.F.Ca.ET.039.01.1.1 Isolate Nodule
109 2979710463 Mesorhizobium sp. M2A.F.Ca.ET.017.03.2.1 Isolate Nodule
110 2979779861 Mesorhizobium sp. M1A.F.Ca.IN.022.02.1.1 Isolate Nodule
111 2979808191 Mesorhizobium sp. M4B.F.Ca.ET.172.01.1.1 Isolate Nodule
112 2987636660 Mesorhizobium sp. M2E.F.Ca.ET.154.01.1.1 Isolate Nodule
113 2987652177 Mesorhizobium sp. M2A.F.Ca.ET.042.01.1.1 Isolate Nodule
114 2987659509 Mesorhizobium sp. M1C.F.Ca.ET.204.01.1.1 Isolate Nodule
115 2987666974 Mesorhizobium sp. WSM4306 Isolate Unclassified
116 2989349275 Shinella kummerowiae CCBAU 25048 Isolate Unclassified
117 2996310559 Mesorhizobium zhangyense CGMCC 1.15528 Isolate Unclassified
118 2996341866 Mesorhizobium sp. M1A.F.Ca.IN.020.32.1.1 Isolate Nodule
119 3004188549 Mesorhizobium sp. M1C.F.Ca.ET.195.01.1.1 Isolate Nodule
120 3004203850 Mesorhizobium sp. M2E.F.Ca.ET.219.01.1.1 Isolate Nodule
121 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
122 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
123 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
124 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
125 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
126 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
127 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
128 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
129 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
130 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
131 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
132 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
133 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
134 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
135 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
136 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
137 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
138 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
139 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
140 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
141 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
142 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
143 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
144 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
145 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
146 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
147 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
148 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
149 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
150 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
151 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
152 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
153 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
154 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
155 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
156 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
157 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
158 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
159 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
160 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
161 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
162 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
163 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
164 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
165 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
166 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
167 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
168 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
169 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
170 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
171 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
172 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
173 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
174 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
175 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
176 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
177 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
178 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
179 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
180 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
181 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
182 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
183 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
184 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
185 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
186 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
187 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
188 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
189 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
190 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
191 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
192 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
193 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
194 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
195 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
196 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
197 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
198 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
199 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
200 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
201 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
202 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
203 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
204 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
205 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
206 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
207 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
208 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
209 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
210 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
211 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
212 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
213 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
214 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
215 8004374579 Mesorhizobium sp. M4B.F.Ca.ET.211.01.1.1 Isolate Nodule
216 8004387939 Mesorhizobium sp. M2D.F.Ca.ET.232.01.1.1 Isolate Nodule
217 8004445564 Mesorhizobium sp. M1A.F.Ca.IN.020.04.1.1 Isolate Nodule
218 8004640170 Mesorhizobium sp. GbtcB19 Isolate Unclassified
219 8004703790 Mesorhizobium sp. M00.F.Ca.ET.158.01.1.1 Isolate Nodule
220 8004714634 Mesorhizobium sp. M2D.F.Ca.ET.153.01.1.1 Isolate Nodule
221 8005658619 Rhizobium terrae CC-HIH110 Isolate Unclassified
222 8055431914 Allorhizobium sonneratiae BGMRC 0089 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 52.04
Metatranscriptomes 0
Isolates 47.96

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.69
Nodule 36.8
Rhizoplane 2.23
Rhizosphere 42.75
Stem 0
Stem Tuber 0
Unclassified 11.52

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25157J39369_1002060 3300002741 Bacteria 5748
2 JGI25165J46597_1000028 3300003214 Bacteria 325146
3 JGI25165J46597_1001649 3300003214 Bacteria 10326
4 Ga0070658_10284820 3300005327 Bacteria 1407
5 Ga0070680_100038267 3300005336 Bacteria 3880
6 Ga0070682_100001181 3300005337 Bacteria 14903
7 Ga0070681_10008082 3300005458 Bacteria 10294
8 Ga0070679_100007820 3300005530 Bacteria 10023
9 Ga0068853_100005273 3300005539 Bacteria 10121
10 Ga0068853_100018330 3300005539 Bacteria 5793
11 Ga0070693_100004575 3300005547 Bacteria 6562
12 Ga0068855_100134780 3300005563 Bacteria 2818
13 Ga0081540_1022302 3300005983 Bacteria 3741
14 Ga0081539_10001131 3300005985 Bacteria 48406
15 Ga0075364_10097694 3300006051 Bacteria 1953
16 Ga0075362_10064690 3300006177 Bacteria 1660
17 Ga0075369_10039583 3300006186 Bacteria 2013
18 Ga0075369_10096807 3300006186 Bacteria 1321
19 Ga0105240_10026493 3300009093 Bacteria 7607
20 Ga0105240_10254055 3300009093 Bacteria 2031
21 Ga0105241_10086010 3300009174 Bacteria 2472
22 Ga0105237_10132668 3300009545 Bacteria 2485
23 Ga0105238_10052133 3300009551 Bacteria 4113
24 Ga0105239_10078797 3300010375 Bacteria 3626
25 Ga0105239_10316195 3300010375 Bacteria 1760
26 Ga0157370_10025426 3300013104 Bacteria 5860
27 Ga0157369_10014206 3300013105 Bacteria 8996
28 Ga0157372_10014218 3300013307 Bacteria 8506
29 Ga0209437_100033 3300025233 Bacteria 512520
30 Ga0209026_1000120 3300025250 Bacteria 130091
31 Ga0209759_1000368 3300025256 Bacteria 56484
32 Ga0209233_1000064 3300025261 Bacteria 392156
33 Ga0209233_1000087 3300025261 Bacteria 325225
34 Ga0209130_1004683 3300025284 Bacteria 5070
35 Ga0209758_1004764 3300025297 Bacteria 11008
36 Ga0207707_10006763 3300025912 Bacteria 10012
37 Ga0207695_10153829 3300025913 Bacteria 2237
38 Ga0207660_10154753 3300025917 Bacteria 1764
39 Ga0207650_10127527 3300025925 Bacteria 1988
40 Ga0207689_10304260 3300025942 Bacteria 1322
41 Ga0207639_10026245 3300026041 Bacteria 4232
42 Ga0207639_10092724 3300026041 Bacteria 2421
43 Ga0207702_10126874 3300026078 Bacteria 2292
44 Ga0207675_100471024 3300026118 Bacteria 1247
45 Ga0209281_1000053 3300027111 Bacteria 309587
46 Ga0268266_10193837 3300028379 Bacteria 1856
47 Ga0268256_1001309 3300030500 Bacteria 15327
48 Ga0265340_10027543 3300031247 Bacteria 2864
49 Ga0265339_10000668 3300031249 Bacteria 26494
50 Ga0265316_10012642 3300031344 Bacteria 7556
51 Ga0265314_10011168 3300031711 Bacteria 7441
52 Ga0307412_10012641 3300031911 Bacteria 4927
53 Ga0373927_0000925 3300035695 Bacteria 22236
54 Ga0373925_0003381 3300037068 Bacteria 12371
55 Ga0395900_0011881 3300037418 Bacteria 8903
56 Ga0395900_0139533 3300037418 Bacteria 2483
57 Ga0395898_0210239 3300037466 Bacteria 1856
58 Ga0395905_0180962 3300037471 Bacteria 1979
59 Ga0395901_0007884 3300038443 Bacteria 10743
60 Ga0395901_0030144 3300038443 Bacteria 5588
61 Ga0395901_0362435 3300038443 Bacteria 1494
62 Ga0436365_1545126 3300039437 Bacteria 16095
63 Ga0436360_1116446 3300039438 Bacteria 1826
64 Ga0436361_0014216 3300039447 Bacteria 6751
65 Ga0436363_0389107 3300039450 Bacteria 5908
66 Ga0495638_0001838 3300046460 Bacteria 18376
67 Ga0495654_0000092 3300046530 Bacteria 101504
68 Ga0495597_0032202 3300046542 Bacteria 2380
69 Ga0495602_0272712 3300048088 Bacteria 1250
70 Ga0496101_0129137 3300048904 Bacteria 1918
71 Ga0496104_0176140 3300048907 Bacteria 2049
72 Ga0496110_0089252 3300048913 Bacteria 2755
73 Ga0496112_0161298 3300048915 Bacteria 2209
74 Ga0496118_0132584 3300048921 Bacteria 1597
75 Ga0496119_0007620 3300048922 Bacteria 9709
76 Ga0496119_0030665 3300048922 Bacteria 3620
77 Ga0496120_0000781 3300048923 Bacteria 46067
78 Ga0496123_0052672 3300048926 Bacteria 2698
79 Ga0496125_0147965 3300048928 Bacteria 1619
80 Ga0496125_0218953 3300048928 Bacteria 1228
81 Ga0501032_0005119 3300049569 Bacteria 9781
82 Ga0501033_0002900 3300049570 Bacteria 14349
83 Ga0501033_0010561 3300049570 Bacteria 7079
84 Ga0501034_0041253 3300049571 Bacteria 4669
85 Ga0501034_0076717 3300049571 Bacteria 3348
86 Ga0501034_0116960 3300049571 Bacteria 2654
87 Ga0501034_0269836 3300049571 Bacteria 1643
88 Ga0501036_0105219 3300049572 Bacteria 2387
89 Ga0501037_0000084 3300049573 Bacteria 85767
90 Ga0501037_0072920 3300049573 Bacteria 2497
91 Ga0501038_0103327 3300049574 Bacteria 2370
92 Ga0501043_0000029 3300049579 Bacteria 143328
93 Ga0501043_0041533 3300049579 Bacteria 3614
94 Ga0501043_0112277 3300049579 Bacteria 2140
95 Ga0501043_0353195 3300049579 Bacteria 1117
96 Ga0501047_0009453 3300049581 Bacteria 9210
97 Ga0501047_0024030 3300049581 Bacteria 5853
98 Ga0501047_0030601 3300049581 Bacteria 5188
99 Ga0501048_0150535 3300049582 Bacteria 1646
100 Ga0501068_0004399 3300049584 Bacteria 7662
101 Ga0501069_0000031 3300049585 Bacteria 97968
102 Ga0501069_0019291 3300049585 Bacteria 3686
103 Ga0501070_0000045 3300049586 Bacteria 107880
104 Ga0501070_0000186 3300049586 Bacteria 58369
105 Ga0501070_0004899 3300049586 Bacteria 11433
106 Ga0501070_0042644 3300049586 Bacteria 3779
107 Ga0501070_0049169 3300049586 Bacteria 3502
108 Ga0501070_0066841 3300049586 Bacteria 2977
109 Ga0501070_0100694 3300049586 Bacteria 2390
110 Ga0501071_0002491 3300049587 Bacteria 11196
111 Ga0501071_0103441 3300049587 Bacteria 2101
112 Ga0501073_0031494 3300049589 Bacteria 3783
113 Ga0501074_0000012 3300049590 Bacteria 83803
114 Ga0501074_0010733 3300049590 Bacteria 6655
115 Ga0501074_0117111 3300049590 Bacteria 1906
116 Ga0501080_0004519 3300049742 Bacteria 12397
117 Ga0501080_0019131 3300049742 Bacteria 6342
118 Ga0501080_0055781 3300049742 Bacteria 3680
119 Ga0501083_0000078 3300049744 Bacteria 65280
120 Ga0501083_0006227 3300049744 Bacteria 8463
121 Ga0501035_0000265 3300049822 Bacteria 62216
122 Ga0501035_0004593 3300049822 Bacteria 13089
123 Ga0501035_0006043 3300049822 Bacteria 11401
124 Ga0501035_0013501 3300049822 Bacteria 7538
125 Ga0501035_0077225 3300049822 Bacteria 2943
126 Ga0501035_0130912 3300049822 Bacteria 2187
127 Ga0501044_0000113 3300049823 Bacteria 97940
128 Ga0501044_0009220 3300049823 Bacteria 10778
129 Ga0501044_0047352 3300049823 Bacteria 4447
130 Ga0501044_0062199 3300049823 Bacteria 3816
131 Ga0501044_0076820 3300049823 Bacteria 3388
132 Ga0501044_0434079 3300049823 Bacteria 1222
133 nmdc:mga0yw44_26440_c1 3300050492 Bacteria 3315
134 nmdc:mga06z11_161548_c1 3300050494 Bacteria 1281
135 nmdc:mga06z11_30041_c1 3300050494 Bacteria 2625
136 Ga0500610_0021895 3300053079 Bacteria 3144
137 Ga0500618_000227 3300053125 Bacteria 44231
138 Ga0500568_0000143 3300053139 Bacteria 63442
139 Ga0500573_0001776 3300053140 Bacteria 10485
140 Ga0501082_0065107 3300060353 Bacteria 3139

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 iso_pu_bacteria 2881861095 2881868681 307
2 3300025297 Ga0209758_1004764 Ga0209758_10047644 313
3 iso_pu_bacteria 2885318864 2885321162 314
4 3300049574 Ga0501038_0103327 Ga0501038_0103327_656_1702 315
5 3300049579 Ga0501043_0112277 Ga0501043_0112277_908_1954 315
6 3300031711 Ga0265314_10011168 Ga0265314_100111684 324
7 3300049823 Ga0501044_0047352 Ga0501044_0047352_1986_3002 328
8 iso_pu_bacteria 2922130491 2922137673 328
9 3300005327 Ga0070658_10284820 Ga0070658_102848202 329
10 3300009093 Ga0105240_10026493 Ga0105240_100264933 329
11 3300010375 Ga0105239_10316195 Ga0105239_103161952 329
12 3300026078 Ga0207702_10126874 Ga0207702_101268742 329
13 3300039437 Ga0436365_1545126 Ga0436365_1545126_353_1348 329
14 3300048904 Ga0496101_0129137 Ga0496101_0129137_780_1775 329
15 3300048907 Ga0496104_0176140 Ga0496104_0176140_420_1415 329
16 3300048913 Ga0496110_0089252 Ga0496110_0089252_1413_2408 329
17 3300039438 Ga0436360_1116446 Ga0436360_1116446_266_1264 330
18 3300039447 Ga0436361_0014216 Ga0436361_0014216_1409_2407 330
19 3300049571 Ga0501034_0269836 Ga0501034_0269836_232_1242 330
20 3300049573 Ga0501037_0072920 Ga0501037_0072920_1135_2166 331
21 iso_pu_bacteria 2937843397 2937846799 332
22 3300031247 Ga0265340_10027543 Ga0265340_100275432 334
23 iso_pu_bacteria 2643221551 2643775445 334
24 iso_pu_bacteria 2643221555 2643793891 334
25 3300025284 Ga0209130_1004683 Ga0209130_10046833 335
26 3300035695 Ga0373927_0000925 Ga0373927_0000925_2395_3408 335
27 3300037068 Ga0373925_0003381 Ga0373925_0003381_242_1255 335
28 3300049579 Ga0501043_0353195 Ga0501043_0353195_65_1081 335
29 3300053139 Ga0500568_0000143 Ga0500568_0000143_12709_13725 335
30 iso_pu_bacteria 2899803654 2899803789 335
31 3300005336 Ga0070680_100038267 Ga0070680_1000382673 336
32 3300005337 Ga0070682_100001181 Ga0070682_1000011817 336
33 3300005458 Ga0070681_10008082 Ga0070681_100080829 336
34 3300005530 Ga0070679_100007820 Ga0070679_1000078208 336
35 3300005539 Ga0068853_100005273 Ga0068853_1000052739 336
36 3300005547 Ga0070693_100004575 Ga0070693_1000045754 336
37 3300005563 Ga0068855_100134780 Ga0068855_1001347803 336
38 3300009174 Ga0105241_10086010 Ga0105241_100860103 336
39 3300013104 Ga0157370_10025426 Ga0157370_100254263 336
40 3300013307 Ga0157372_10014218 Ga0157372_100142186 336
41 3300025912 Ga0207707_10006763 Ga0207707_100067639 336
42 3300025917 Ga0207660_10154753 Ga0207660_101547532 336
43 3300026041 Ga0207639_10026245 Ga0207639_100262453 336
44 3300049570 Ga0501033_0010561 Ga0501033_0010561_4167_5180 336
45 3300049581 Ga0501047_0024030 Ga0501047_0024030_336_1349 336
46 3300049585 Ga0501069_0019291 Ga0501069_0019291_1624_2637 336
47 3300049586 Ga0501070_0004899 Ga0501070_0004899_4172_5185 336
48 3300049590 Ga0501074_0010733 Ga0501074_0010733_5398_6411 336
49 3300049742 Ga0501080_0019131 Ga0501080_0019131_3026_4039 336
50 3300049822 Ga0501035_0004593 Ga0501035_0004593_5816_6829 336
51 iso_pu_bacteria 2757320392 2757570814 336
52 iso_pu_bacteria 2854911287 2854914515 336
53 iso_pu_bacteria 8055431914 8055434206 336
54 3300005985 Ga0081539_10001131 Ga0081539_1000113139 337
55 3300049572 Ga0501036_0105219 Ga0501036_0105219_539_1555 337
56 3300049579 Ga0501043_0041533 Ga0501043_0041533_713_1729 337
57 3300049581 Ga0501047_0009453 Ga0501047_0009453_6218_7234 337
58 3300049581 Ga0501047_0030601 Ga0501047_0030601_520_1536 337
59 3300049582 Ga0501048_0150535 Ga0501048_0150535_52_1068 337
60 3300049586 Ga0501070_0000186 Ga0501070_0000186_6254_7270 337
61 3300049586 Ga0501070_0066841 Ga0501070_0066841_1356_2372 337
62 3300049586 Ga0501070_0100694 Ga0501070_0100694_740_1756 337
63 3300049587 Ga0501071_0103441 Ga0501071_0103441_351_1367 337
64 3300049590 Ga0501074_0117111 Ga0501074_0117111_158_1174 337
65 3300049822 Ga0501035_0006043 Ga0501035_0006043_9094_10110 337
66 3300049822 Ga0501035_0013501 Ga0501035_0013501_3503_4519 337
67 3300049822 Ga0501035_0077225 Ga0501035_0077225_139_1155 337
68 3300049823 Ga0501044_0009220 Ga0501044_0009220_6146_7162 337
69 3300049823 Ga0501044_0062199 Ga0501044_0062199_196_1212 337
70 3300049823 Ga0501044_0076820 Ga0501044_0076820_30_1046 337
71 3300049823 Ga0501044_0434079 Ga0501044_0434079_158_1174 337
72 iso_pu_bacteria 2510917030 2511197183 337
73 iso_pu_bacteria 2534681786 2535484431 337
74 iso_pu_bacteria 2582581307 2585273248 337
75 iso_pu_bacteria 2585427609 2585905172 337
76 iso_pu_bacteria 2585428125 2587979713 337
77 iso_pu_bacteria 2600254933 2600375280 337
78 iso_pu_bacteria 2751185800 2753358997 337
79 iso_pu_bacteria 2758568016 2758641233 337
80 iso_pu_bacteria 2838736955 2838741209 337
81 iso_pu_bacteria 2841840854 2841844894 337
82 iso_pu_bacteria 2842140634 2842144616 337
83 iso_pu_bacteria 2857531043 2857531878 337
84 iso_pu_bacteria 2915650412 2915651502 337
85 iso_pu_bacteria 2989349275 2989354149 337
86 iso_pu_bacteria 2996310559 2996313324 337
87 iso_pu_bacteria 2513237088 2513596264 338
88 iso_pu_bacteria 2513237305 2514420484 338
89 iso_pu_bacteria 2693429783 2694633678 338
90 iso_pu_bacteria 2693429784 2694639983 338
91 iso_pu_bacteria 2721755686 2723577411 338
92 iso_pu_bacteria 2791355091 2792622665 338
93 iso_pu_bacteria 2791355092 2792628414 338
94 iso_pu_bacteria 2856349417 2856350410 338
95 iso_pu_bacteria 2871488783 2871493933 338
96 iso_pu_bacteria 2871495908 2871498447 338
97 iso_pu_bacteria 2876369609 2876372267 338
98 iso_pu_bacteria 2878753008 2878756509 338
99 iso_pu_bacteria 2881155292 2881157450 338
100 iso_pu_bacteria 2881845957 2881847018 338
101 iso_pu_bacteria 2881853255 2881857061 338
102 iso_pu_bacteria 2882632389 2882634376 338
103 iso_pu_bacteria 2882912400 2882915272 338
104 iso_pu_bacteria 2885305155 2885311558 338
105 iso_pu_bacteria 2885326080 2885327066 338
106 iso_pu_bacteria 2885350715 2885356051 338
107 iso_pu_bacteria 2903492973 2903502563 338
108 iso_pu_bacteria 2924762789 2924764630 338
109 iso_pu_bacteria 2924784321 2924788094 338
110 iso_pu_bacteria 2961170736 2961172798 338
111 iso_pu_bacteria 2967996073 2967998010 338
112 iso_pu_bacteria 2968003550 2968008661 338
113 iso_pu_bacteria 2970503327 2970505392 338
114 iso_pu_bacteria 2977821940 2977825690 338
115 iso_pu_bacteria 2979808191 2979810113 338
116 iso_pu_bacteria 2987666974 2987667434 338
117 iso_pu_bacteria 8004374579 8004378098 338
118 3300003214 JGI25165J46597_1001649 JGI25165J46597_10016497 339
119 3300025233 Ga0209437_100033 Ga0209437_100033290 339
120 3300025261 Ga0209233_1000064 Ga0209233_1000064132 339
121 3300025942 Ga0207689_10304260 Ga0207689_103042601 339
122 3300030500 Ga0268256_1001309 Ga0268256_10013093 339
123 3300046460 Ga0495638_0001838 Ga0495638_0001838_6620_7645 339
124 3300048088 Ga0495602_0272712 Ga0495602_0272712_213_1238 339
125 3300048922 Ga0496119_0007620 Ga0496119_0007620_1466_2497 339
126 3300048926 Ga0496123_0052672 Ga0496123_0052672_1454_2485 339
127 3300048928 Ga0496125_0147965 Ga0496125_0147965_443_1474 339
128 3300048928 Ga0496125_0218953 Ga0496125_0218953_56_1087 339
129 3300049571 Ga0501034_0041253 Ga0501034_0041253_3373_4404 339
130 3300049571 Ga0501034_0076717 Ga0501034_0076717_968_2023 339
131 3300049571 Ga0501034_0116960 Ga0501034_0116960_1347_2375 339
132 3300049586 Ga0501070_0049169 Ga0501070_0049169_2093_3118 339
133 3300049742 Ga0501080_0055781 Ga0501080_0055781_1860_2888 339
134 3300053140 Ga0500573_0001776 Ga0500573_0001776_4585_5610 339
135 iso_pu_bacteria 2599185301 2599937997 339
136 iso_pu_bacteria 2791355253 2793282324 339
137 iso_pu_bacteria 8005658619 8005659960 339
138 3300006051 Ga0075364_10097694 Ga0075364_100976942 340
139 3300006177 Ga0075362_10064690 Ga0075362_100646902 340
140 3300006186 Ga0075369_10039583 Ga0075369_100395832 340
141 3300006186 Ga0075369_10096807 Ga0075369_100968072 340
142 3300013105 Ga0157369_10014206 Ga0157369_100142066 340
143 3300025925 Ga0207650_10127527 Ga0207650_101275272 340
144 3300026118 Ga0207675_100471024 Ga0207675_1004710242 340
145 3300027111 Ga0209281_1000053 Ga0209281_1000053209 340
146 3300031911 Ga0307412_10012641 Ga0307412_100126412 340
147 3300038443 Ga0395901_0362435 Ga0395901_0362435_309_1337 340
148 3300046530 Ga0495654_0000092 Ga0495654_0000092_68064_69092 340
149 3300046542 Ga0495597_0032202 Ga0495597_0032202_975_2003 340
150 3300049744 Ga0501083_0006227 Ga0501083_0006227_5887_6915 340
151 3300050492 nmdc:mga0yw44_26440_c1 nmdc:mga0yw44_26440_c1_1292_2320 340
152 3300050494 nmdc:mga06z11_30041_c1 nmdc:mga06z11_30041_c1_542_1570 340
153 3300053079 Ga0500610_0021895 Ga0500610_0021895_1656_2684 340
154 3300053125 Ga0500618_000227 Ga0500618_000227_25870_26898 340
155 iso_pu_bacteria 2513237090 2513609082 340
156 iso_pu_bacteria 2847670302 2847671813 340
157 iso_pu_bacteria 2847686936 2847688044 340
158 iso_pu_bacteria 2856314179 2856318457 340
159 iso_pu_bacteria 2856364286 2856364608 340
160 iso_pu_bacteria 2857349434 2857355866 340
161 iso_pu_bacteria 2869285874 2869292719 340
162 iso_pu_bacteria 2871429161 2871429532 340
163 iso_pu_bacteria 2871444079 2871447123 340
164 iso_pu_bacteria 2874102143 2874103816 340
165 iso_pu_bacteria 2874146452 2874146995 340
166 iso_pu_bacteria 2874155637 2874157025 340
167 iso_pu_bacteria 2876392853 2876399478 340
168 iso_pu_bacteria 2876413966 2876414464 340
169 iso_pu_bacteria 2878035449 2878037793 340
170 iso_pu_bacteria 2878745973 2878746296 340
171 iso_pu_bacteria 2878760144 2878762666 340
172 iso_pu_bacteria 2878767105 2878769632 340
173 iso_pu_bacteria 2881147464 2881153653 340
174 iso_pu_bacteria 2881161766 2881162808 340
175 iso_pu_bacteria 2889010040 2889012969 340
176 iso_pu_bacteria 2889016732 2889022163 340
177 iso_pu_bacteria 2903492973 2903500638 340
178 iso_pu_bacteria 2903540706 2903543245 340
179 iso_pu_bacteria 2904659560 2904666005 340
180 iso_pu_bacteria 2906308376 2906308431 340
181 iso_pu_bacteria 2906321335 2906321977 340
182 iso_pu_bacteria 2906328253 2906331211 340
183 iso_pu_bacteria 2906414383 2906418494 340
184 iso_pu_bacteria 2922158528 2922165444 340
185 iso_pu_bacteria 2924726620 2924729690 340
186 iso_pu_bacteria 2937813078 2937814356 340
187 iso_pu_bacteria 2937891427 2937891483 340
188 iso_pu_bacteria 2937994558 2937997094 340
189 iso_pu_bacteria 2958041894 2958046731 340
190 iso_pu_bacteria 2958115193 2958116991 340
191 iso_pu_bacteria 2958130278 2958137388 340
192 iso_pu_bacteria 2958165035 2958167564 340
193 iso_pu_bacteria 2958172287 2958177390 340
194 iso_pu_bacteria 2958179912 2958180235 340
195 iso_pu_bacteria 2961077736 2961078067 340
196 iso_pu_bacteria 2961114664 2961121349 340
197 iso_pu_bacteria 2961163497 2961166036 340
198 iso_pu_bacteria 2965018300 2965020855 340
199 iso_pu_bacteria 2968091066 2968096906 340
200 iso_pu_bacteria 2968097103 2968102383 340
201 iso_pu_bacteria 2968110612 2968117502 340
202 iso_pu_bacteria 2968117919 2968118283 340
203 iso_pu_bacteria 2968128360 2968131097 340
204 iso_pu_bacteria 2968171901 2968174433 340
205 iso_pu_bacteria 2970554993 2970557524 340
206 iso_pu_bacteria 2977843712 2977844865 340
207 iso_pu_bacteria 2977858184 2977862825 340
208 iso_pu_bacteria 2977864932 2977869570 340
209 iso_pu_bacteria 2977942078 2977943843 340
210 iso_pu_bacteria 2977971508 2977972510 340
211 iso_pu_bacteria 2979710463 2979715848 340
212 iso_pu_bacteria 2979779861 2979785944 340
213 iso_pu_bacteria 2987636660 2987639680 340
214 iso_pu_bacteria 2987652177 2987658668 340
215 iso_pu_bacteria 2987659509 2987662043 340
216 iso_pu_bacteria 2996341866 2996342531 340
217 iso_pu_bacteria 3004188549 3004191094 340
218 iso_pu_bacteria 3004203850 3004207253 340
219 iso_pu_bacteria 8004387939 8004388461 340
220 iso_pu_bacteria 8004445564 8004450703 340
221 iso_pu_bacteria 8004640170 8004641753 340
222 iso_pu_bacteria 8004703790 8004710873 340
223 iso_pu_bacteria 8004714634 8004714687 340
224 3300005983 Ga0081540_1022302 Ga0081540_10223023 341
225 3300039450 Ga0436363_0389107 Ga0436363_0389107_3069_4130 341
226 3300002741 JGI25157J39369_1002060 JGI25157J39369_10020602 342
227 3300003214 JGI25165J46597_1000028 JGI25165J46597_1000028189 342
228 3300005539 Ga0068853_100018330 Ga0068853_1000183304 342
229 3300009093 Ga0105240_10254055 Ga0105240_102540552 342
230 3300009545 Ga0105237_10132668 Ga0105237_101326682 342
231 3300009551 Ga0105238_10052133 Ga0105238_100521332 342
232 3300010375 Ga0105239_10078797 Ga0105239_100787973 342
233 3300025250 Ga0209026_1000120 Ga0209026_1000120104 342
234 3300025256 Ga0209759_1000368 Ga0209759_100036839 342
235 3300025261 Ga0209233_1000087 Ga0209233_1000087191 342
236 3300025913 Ga0207695_10153829 Ga0207695_101538292 342
237 3300026041 Ga0207639_10092724 Ga0207639_100927242 342
238 3300028379 Ga0268266_10193837 Ga0268266_101938372 342
239 3300031249 Ga0265339_10000668 Ga0265339_100006689 342
240 3300031344 Ga0265316_10012642 Ga0265316_100126424 342
241 3300037418 Ga0395900_0011881 Ga0395900_0011881_1781_2815 342
242 3300037418 Ga0395900_0139533 Ga0395900_0139533_620_1654 342
243 3300037466 Ga0395898_0210239 Ga0395898_0210239_545_1579 342
244 3300037471 Ga0395905_0180962 Ga0395905_0180962_539_1579 342
245 3300038443 Ga0395901_0007884 Ga0395901_0007884_3773_4807 342
246 3300038443 Ga0395901_0030144 Ga0395901_0030144_2999_4033 342
247 3300048915 Ga0496112_0161298 Ga0496112_0161298_818_1852 342
248 3300048921 Ga0496118_0132584 Ga0496118_0132584_268_1296 342
249 3300048922 Ga0496119_0030665 Ga0496119_0030665_1791_2915 342
250 3300048923 Ga0496120_0000781 Ga0496120_0000781_37026_38150 342
251 3300049569 Ga0501032_0005119 Ga0501032_0005119_3328_4365 342
252 3300049570 Ga0501033_0002900 Ga0501033_0002900_7104_8141 342
253 3300049573 Ga0501037_0000084 Ga0501037_0000084_5387_6424 342
254 3300049579 Ga0501043_0000029 Ga0501043_0000029_20954_21991 342
255 3300049584 Ga0501068_0004399 Ga0501068_0004399_5259_6296 342
256 3300049585 Ga0501069_0000031 Ga0501069_0000031_20973_22010 342
257 3300049586 Ga0501070_0000045 Ga0501070_0000045_20973_22010 342
258 3300049586 Ga0501070_0042644 Ga0501070_0042644_481_1551 342
259 3300049587 Ga0501071_0002491 Ga0501071_0002491_7291_8328 342
260 3300049589 Ga0501073_0031494 Ga0501073_0031494_1108_2145 342
261 3300049590 Ga0501074_0000012 Ga0501074_0000012_72446_73483 342
262 3300049742 Ga0501080_0004519 Ga0501080_0004519_6002_7039 342
263 3300049744 Ga0501083_0000078 Ga0501083_0000078_17710_18747 342
264 3300049822 Ga0501035_0000265 Ga0501035_0000265_55793_56830 342
265 3300049822 Ga0501035_0130912 Ga0501035_0130912_912_1994 342
266 3300049823 Ga0501044_0000113 Ga0501044_0000113_20973_22010 342
267 3300050494 nmdc:mga06z11_161548_c1 nmdc:mga06z11_161548_c1_41_1075 342
268 3300060353 Ga0501082_0065107 Ga0501082_0065107_840_1877 342
269 iso_pu_bacteria 2958100919 2958105462 342

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04166

PdxA

Pyridoxal phosphate biosynthetic protein PdxA

32

326

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
6xmy-assembly1.cif.gz_A crystal structure of 4-hydroxythreonine-4-phosphate dehydrogenase from legionella pneumophila in complex with nad 0.9139 3 335
1ps6-assembly1.cif.gz_A crystal structure of e.coli pdxa 0.906 5 336
6xmy-assembly1.cif.gz_A crystal structure of 4-hydroxythreonine-4-phosphate dehydrogenase from legionella pneumophila in complex with nad 0.9059 3 335
1ps6-assembly1.cif.gz_A crystal structure of e.coli pdxa 0.8955 5 336
1r8k-assembly1.cif.gz_B pdxa protein; nad-dependent dehydrogenase/carboxylase; subunit of pyridoxine phosphate biosynthetic protein pdxj-pdxa [salmonella typhimurium] 0.8936 5 335
ID Description Score Start End Superfamily
1r8kA00 Alpha Beta;3-Layer(aba) Sandwich;Isopropylmalate Dehydrogenase;Isopropylmalate Dehydrogenase 0.8788 4 335 3.40.718.10
1r8kA00 Alpha Beta;3-Layer(aba) Sandwich;Isopropylmalate Dehydrogenase;Isopropylmalate Dehydrogenase 0.8736 4 335 3.40.718.10
4jqpB00 Alpha Beta;3-Layer(aba) Sandwich;Isopropylmalate Dehydrogenase;Isopropylmalate Dehydrogenase 0.8202 3 332 3.40.718.10
2hi1B00 Alpha Beta;3-Layer(aba) Sandwich;Isopropylmalate Dehydrogenase;Isopropylmalate Dehydrogenase 0.8141 7 331 3.40.718.10
4jqpB00 Alpha Beta;3-Layer(aba) Sandwich;Isopropylmalate Dehydrogenase;Isopropylmalate Dehydrogenase 0.8092 3 332 3.40.718.10
ID Description Score Start End GO Terms
AF-A0A436MTD4-F1-model_v4 deleted 0.9785 1 142
AF-A0A533IVD6-F1-model_v4 deleted 0.9778 4 133
AF-A0A436MTD4-F1-model_v4 deleted 0.9718 1 142
AF-A0A533IVD6-F1-model_v4 deleted 0.9705 4 133
AF-A0A434CM01-F1-model_v4 4-hydroxythreonine-4-phosphate dehydrogenase 0.968 1 96

Feature Viewer

pLDDT pTM Quality
90.01 0.9 High
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Predicted Structure (AlphaFold2)

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