F376170

General Info

Members Datasets Scaffolds Average Seq Length
269 187 538 307

Family's Representative Sequence

Representative Sequence 3300009094|Ga0111539_10101868|Ga0111539_101018683
Length 339
Sequence VVDALRIVFFGTPAFAVPSLEALVASRHEVVAVVSQPDRPKGRGHQLQATPTKVVALTHAIPVLQPAKIREPAFLDQIRALGADLGVVVAFGRILPDSLLAIPRLGMINVHASVLPRYRGAAPIQRSVLAGDAETGVTIMRVEAELDAGPTFAVATVPIPSDATSGDMEAVLAARGAGLLVPVVDDLARGRAVETPQDHARATHAAKITKEEGTIDWTQPATVVHDQVRGLQPWPLASTRLGPARLVLRRTRVLGTRSADGHFRGQVPDVPIYRPGPGEGPFADLAPGTVVRASGDELTVACGGGTELQILELQPEGRRTMTAREFLAGRAVSPGTQFT

Samples

Sample ID Description Type Environment
1 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
2 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
8 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
11 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
12 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
13 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
14 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
15 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
16 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
17 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
18 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
19 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
20 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
21 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
22 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
23 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
24 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
25 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
26 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
27 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
28 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
29 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
30 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
31 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
32 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
33 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
34 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
35 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
36 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
37 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
38 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
39 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
40 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
41 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
42 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
43 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
44 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
45 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
46 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
47 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
48 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
49 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
50 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
51 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
52 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
53 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
54 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
55 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
56 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
57 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
58 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
59 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
60 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
61 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
62 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
63 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
64 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
65 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
66 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
67 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
68 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
69 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
70 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
110 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
111 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
112 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
113 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
114 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
115 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
116 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
117 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
118 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
119 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
120 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
121 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
122 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
123 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
124 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
125 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
126 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
127 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
128 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
129 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
130 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
131 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
132 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
133 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
134 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
135 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
136 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
137 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
138 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
139 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
140 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
141 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
142 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
143 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
144 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
145 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
146 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
147 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
148 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
149 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
150 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
151 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
152 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
153 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
154 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
155 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
157 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
158 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
159 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
160 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
161 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
162 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
163 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
164 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
165 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
166 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
167 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
168 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
169 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
170 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
171 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
172 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
173 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
174 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
175 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
176 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
177 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
178 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
179 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
180 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
181 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
182 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
183 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
184 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
185 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
186 2523533628 Maridesulfovibrio zosterae DSM 11974 Isolate Rhizosphere
187 2808606365 Phycicoccus sp. SLBN-51 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.26
Metatranscriptomes 0
Isolates 0.74

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.32
Nodule 0
Rhizoplane 1.86
Rhizosphere 89.96
Stem 0
Stem Tuber 0
Unclassified 3.72

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0111539_10101868 3300009094 Bacteria 3371
2 Ga0065715_10120451 3300005293 Bacteria 2257
3 Ga0065715_10121401 3300005293 Bacteria 2231
4 Ga0065707_10012846 3300005295 Bacteria 1959
5 Ga0070683_100021936 3300005329 Bacteria 5701
6 Ga0070670_100010791 3300005331 Bacteria 7803
7 Ga0070670_100066578 3300005331 Bacteria 3091
8 Ga0068869_100133518 3300005334 Bacteria 1910
9 Ga0070666_10001370 3300005335 Bacteria 14800
10 Ga0070666_10143351 3300005335 Bacteria 1664
11 Ga0070682_100000007 3300005337 Bacteria 346590
12 Ga0068868_100000300 3300005338 Bacteria 33268
13 Ga0068868_100109174 3300005338 Bacteria 2247
14 Ga0070689_100000767 3300005340 Bacteria 19631
15 Ga0070689_100154639 3300005340 Bacteria 1851
16 Ga0070692_10008579 3300005345 Bacteria 4564
17 Ga0070671_100211603 3300005355 Bacteria 1644
18 Ga0070674_100095328 3300005356 Bacteria 2157
19 Ga0070659_100125100 3300005366 Unclassified 2086
20 Ga0070713_100018482 3300005436 Bacteria 5297
21 Ga0070700_100021809 3300005441 Bacteria 3727
22 Ga0070708_100005557 3300005445 Bacteria 9988
23 Ga0070708_100011643 3300005445 Bacteria 7161
24 Ga0070708_100148770 3300005445 Bacteria 2177
25 Ga0070708_100158979 3300005445 Bacteria 2105
26 Ga0070681_10359052 3300005458 Bacteria 1367
27 Ga0070706_100039133 3300005467 Bacteria 4378
28 Ga0070707_100002888 3300005468 Bacteria 16326
29 Ga0070707_100009669 3300005468 Bacteria 8961
30 Ga0070707_100014765 3300005468 Bacteria 7322
31 Ga0070698_100024127 3300005471 Bacteria 6347
32 Ga0070699_100167220 3300005518 Bacteria 1948
33 Ga0070697_100405591 3300005536 Unclassified 1183
34 Ga0070672_100000216 3300005543 Bacteria 31817
35 Ga0070696_100165025 3300005546 Bacteria 1634
36 Ga0070693_100016206 3300005547 Bacteria 3852
37 Ga0070665_100213773 3300005548 Bacteria 1929
38 Ga0070664_100003615 3300005564 Bacteria 12457
39 Ga0068854_100494628 3300005578 Bacteria 1029
40 Ga0068859_100350133 3300005617 Bacteria 1572
41 Ga0068864_100000028 3300005618 Bacteria 227840
42 Ga0068864_100319482 3300005618 Bacteria 1458
43 Ga0068866_10000010 3300005718 Bacteria 98038
44 Ga0068866_10181030 3300005718 Bacteria 1245
45 Ga0068861_100210482 3300005719 Unclassified 1637
46 Ga0068863_100430943 3300005841 Bacteria 1292
47 Ga0068858_100024255 3300005842 Bacteria 5653
48 Ga0068858_100367389 3300005842 Bacteria 1379
49 Ga0081539_10103500 3300005985 Bacteria 1446
50 Ga0070717_10019835 3300006028 Bacteria 5279
51 Ga0070717_10351391 3300006028 Bacteria 1318
52 Ga0075368_10053029 3300006042 Bacteria 1614
53 Ga0075364_10044382 3300006051 Bacteria 2891
54 Ga0070716_100086031 3300006173 Bacteria 1890
55 Ga0075362_10002808 3300006177 Bacteria 5943
56 Ga0075367_10004610 3300006178 Bacteria 6748
57 Ga0075367_10083235 3300006178 Bacteria 1938
58 Ga0075366_10010852 3300006195 Bacteria 5127
59 Ga0075366_10066922 3300006195 Bacteria 2137
60 Ga0075366_10130239 3300006195 Bacteria 1518
61 Ga0097621_100342992 3300006237 Bacteria 1327
62 Ga0075370_10020676 3300006353 Bacteria 3601
63 Ga0075428_100000561 3300006844 Bacteria 38057
64 Ga0075428_100011815 3300006844 Bacteria 9718
65 Ga0075431_100001856 3300006847 Bacteria 20011
66 Ga0075434_100096242 3300006871 Bacteria 2966
67 Ga0075429_100010044 3300006880 Bacteria 8203
68 Ga0075436_100005897 3300006914 Bacteria 8413
69 Ga0075436_100075788 3300006914 Bacteria 2329
70 Ga0097620_100350143 3300006931 Bacteria 1572
71 Ga0075435_100000066 3300007076 Bacteria 54297
72 Ga0075435_100007313 3300007076 Bacteria 7863
73 Ga0075435_100017819 3300007076 Bacteria 5383
74 Ga0075435_100034386 3300007076 Bacteria 4016
75 Ga0105240_10000859 3300009093 Bacteria 54758
76 Ga0105240_10002329 3300009093 Bacteria 30732
77 Ga0105240_10116810 3300009093 Bacteria 3218
78 Ga0111539_10159931 3300009094 Bacteria 2635
79 Ga0105245_10000054 3300009098 Bacteria 124956
80 Ga0105245_10001219 3300009098 Bacteria 23250
81 Ga0105245_10185079 3300009098 Bacteria 1992
82 Ga0105247_10028272 3300009101 Bacteria 3392
83 Ga0114129_10048587 3300009147 Bacteria 5962
84 Ga0114129_10109139 3300009147 Unclassified 3820
85 Ga0105243_10171875 3300009148 Bacteria 1878
86 Ga0105241_10175958 3300009174 Bacteria 1771
87 Ga0105242_10000033 3300009176 Bacteria 98044
88 Ga0105248_10133009 3300009177 Bacteria 2806
89 Ga0105238_10434771 3300009551 Bacteria 1308
90 Ga0105249_10097466 3300009553 Bacteria 2760
91 Ga0105249_10193116 3300009553 Bacteria 1988
92 Ga0105249_10566759 3300009553 Bacteria 1188
93 Ga0105239_10000158 3300010375 Bacteria 98044
94 Ga0105239_10049119 3300010375 Bacteria 4626
95 Ga0105239_10252356 3300010375 Bacteria 1981
96 Ga0157369_10000065 3300013105 Bacteria 144865
97 Ga0163162_10325661 3300013306 Bacteria 1669
98 Ga0157375_10000005 3300013308 Bacteria 429412
99 Ga0157380_10040422 3300014326 Bacteria 3632
100 Ga0157380_10225285 3300014326 Bacteria 1680
101 Ga0157380_10383010 3300014326 Bacteria 1328
102 Ga0157379_10110571 3300014968 Bacteria 2468
103 Ga0157376_10007491 3300014969 Bacteria 7798
104 Ga0207642_10000011 3300025899 Bacteria 87813
105 Ga0207710_10027258 3300025900 Bacteria 2473
106 Ga0207680_10000758 3300025903 Bacteria 15218
107 Ga0207680_10187401 3300025903 Bacteria 1402
108 Ga0207645_10007927 3300025907 Bacteria 7460
109 Ga0207707_10438337 3300025912 Bacteria 1118
110 Ga0207695_10001410 3300025913 Bacteria 40494
111 Ga0207695_10001546 3300025913 Bacteria 37859
112 Ga0207695_10085667 3300025913 Bacteria 3179
113 Ga0207695_10181227 3300025913 Bacteria 2027
114 Ga0207662_10004273 3300025918 Bacteria 7499
115 Ga0207646_10009365 3300025922 Bacteria 9681
116 Ga0207646_10010983 3300025922 Bacteria 8794
117 Ga0207646_10015796 3300025922 Bacteria 7110
118 Ga0207646_10030193 3300025922 Bacteria 4916
119 Ga0207681_10064964 3300025923 Bacteria 2521
120 Ga0207650_10108750 3300025925 Bacteria 2143
121 Ga0207650_10214603 3300025925 Bacteria 1546
122 Ga0207659_10111002 3300025926 Bacteria 2085
123 Ga0207687_10000548 3300025927 Bacteria 25216
124 Ga0207700_10005831 3300025928 Bacteria 7401
125 Ga0207644_10187304 3300025931 Bacteria 1625
126 Ga0207706_10055875 3300025933 Bacteria 3481
127 Ga0207686_10000040 3300025934 Bacteria 125321
128 Ga0207709_10082688 3300025935 Bacteria 2074
129 Ga0207670_10002597 3300025936 Bacteria 9500
130 Ga0207670_10086357 3300025936 Bacteria 2207
131 Ga0207669_10089629 3300025937 Bacteria 1998
132 Ga0207704_10010208 3300025938 Bacteria 4569
133 Ga0207704_10044703 3300025938 Bacteria 2626
134 Ga0207704_10344850 3300025938 Bacteria 1157
135 Ga0207665_10034136 3300025939 Bacteria 3376
136 Ga0207691_10000767 3300025940 Bacteria 31752
137 Ga0207691_10014688 3300025940 Bacteria 7464
138 Ga0207711_10021474 3300025941 Bacteria 5393
139 Ga0207689_10114302 3300025942 Bacteria 2219
140 Ga0207689_10116161 3300025942 Bacteria 2200
141 Ga0207661_10005260 3300025944 Bacteria 9105
142 Ga0207679_10013863 3300025945 Bacteria 5285
143 Ga0207667_10216890 3300025949 Bacteria 1961
144 Ga0207651_10079694 3300025960 Bacteria 2353
145 Ga0207651_10107806 3300025960 Unclassified 2083
146 Ga0207712_10109832 3300025961 Bacteria 2066
147 Ga0207677_10000038 3300026023 Bacteria 113012
148 Ga0207703_10004272 3300026035 Bacteria 11753
149 Ga0207703_10016807 3300026035 Bacteria 5706
150 Ga0207703_10144159 3300026035 Bacteria 2070
151 Ga0207703_10253942 3300026035 Bacteria 1586
152 Ga0207708_10002827 3300026075 Bacteria 12765
153 Ga0207648_10447272 3300026089 Bacteria 1176
154 Ga0207676_10000002 3300026095 Bacteria 1198607
155 Ga0207676_10244982 3300026095 Bacteria 1610
156 Ga0207674_10006754 3300026116 Bacteria 13467
157 Ga0207675_100083342 3300026118 Bacteria 2999
158 Ga0207683_10288016 3300026121 Bacteria 1502
159 Ga0268266_10246733 3300028379 Bacteria 1650
160 Ga0268265_10444714 3300028380 Bacteria 1209
161 Ga0307515_10000005 3300028794 Bacteria 758563
162 Ga0265330_10000149 3300031235 Bacteria 56397
163 Ga0265332_10000301 3300031238 Bacteria 38717
164 Ga0265332_10002286 3300031238 Bacteria 9799
165 Ga0265329_10003111 3300031242 Bacteria 7328
166 Ga0265331_10031262 3300031250 Bacteria 2646
167 Ga0265316_10000007 3300031344 Bacteria 264584
168 Ga0307408_100002925 3300031548 Bacteria 11838
169 Ga0307408_100203328 3300031548 Bacteria 1605
170 Ga0265314_10000005 3300031711 Bacteria 668532
171 Ga0265342_10000005 3300031712 Bacteria 247745
172 Ga0265342_10027372 3300031712 Bacteria 3564
173 Ga0307405_10004783 3300031731 Bacteria 6457
174 Ga0307410_10278304 3300031852 Unclassified 1312
175 Ga0307406_10042636 3300031901 Bacteria 2834
176 Ga0307407_10272600 3300031903 Bacteria 1169
177 Ga0307416_100031737 3300032002 Bacteria 3981
178 Ga0307416_100082830 3300032002 Bacteria 2719
179 Ga0307416_100228403 3300032002 Bacteria 1792
180 Ga0307411_10262883 3300032005 Bacteria 1364
181 Ga0316583_10010195 3300032133 Bacteria 3385
182 Ga0316580_10009185 3300032139 Bacteria 2971
183 Ga0373932_0000397 3300035112 Bacteria 13392
184 Ga0373931_0065922 3300035691 Bacteria 1964
185 Ga0373935_0172520 3300035692 Bacteria 1480
186 Ga0316582_0014315 3300036647 Bacteria 4497
187 Ga0395905_0351147 3300037471 Bacteria 1367
188 Ga0436364_0478677 3300037853 Bacteria 2742
189 Ga0400490_09629 3300038726 Bacteria 62048
190 Ga0400489_02519 3300039093 Bacteria 3827
191 Ga0439431_0025872 3300041997 Bacteria 1436
192 Ga0439449_0066272 3300042007 Bacteria 1332
193 Ga0451577_0094148 3300042876 Bacteria 2675
194 Ga0453683_0175389 3300044673 Bacteria 1358
195 Ga0453684_0000192 3300044712 Bacteria 266757
196 Ga0453684_0003553 3300044712 Bacteria 34868
197 Ga0453684_0018613 3300044712 Bacteria 10646
198 Ga0466960_0010727 3300044901 Bacteria 3812
199 Ga0466959_0077640 3300045049 Bacteria 2396
200 Ga0451576_0000438 3300045051 Bacteria 95259
201 Ga0451576_0001183 3300045051 Bacteria 46810
202 Ga0451576_0328852 3300045051 Unclassified 1600
203 Ga0451576_0519988 3300045051 Bacteria 1250
204 Ga0495653_0126962 3300046463 Bacteria 1810
205 Ga0495594_0063510 3300046499 Bacteria 2046
206 Ga0495667_0085943 3300046559 Bacteria 2041
207 Ga0495635_0044888 3300046663 Bacteria 3049
208 Ga0495626_0010742 3300048091 Bacteria 4869
209 Ga0496101_0216410 3300048904 Bacteria 1486
210 Ga0496109_0178780 3300048912 Bacteria 1992
211 Ga0496112_0145555 3300048915 Bacteria 2338
212 Ga0496113_0035131 3300048916 Bacteria 3664
213 Ga0496113_0347641 3300048916 Bacteria 1189
214 Ga0501031_0088037 3300049568 Bacteria 2025
215 Ga0501034_0035471 3300049571 Bacteria 5056
216 Ga0501034_0378260 3300049571 Bacteria 1341
217 Ga0501036_0008248 3300049572 Bacteria 8539
218 Ga0501036_0070874 3300049572 Bacteria 2947
219 Ga0501039_0017428 3300049575 Bacteria 5509
220 Ga0501040_0207830 3300049576 Bacteria 1391
221 Ga0501041_0067047 3300049577 Bacteria 2200
222 Ga0501042_0003775 3300049578 Bacteria 9575
223 Ga0501042_0032267 3300049578 Bacteria 3708
224 Ga0501047_0190316 3300049581 Unclassified 1916
225 Ga0501069_0066625 3300049585 Bacteria 2014
226 Ga0501070_0146394 3300049586 Bacteria 1950
227 Ga0501070_0253663 3300049586 Bacteria 1439
228 Ga0501071_0028058 3300049587 Bacteria 3964
229 Ga0501071_0031804 3300049587 Bacteria 3744
230 Ga0501072_0083183 3300049588 Bacteria 2537
231 Ga0501072_0136653 3300049588 Bacteria 1954
232 Ga0501074_0322415 3300049590 Bacteria 1097
233 Ga0501075_0003760 3300049591 Bacteria 10195
234 Ga0501076_0005846 3300049592 Bacteria 8875
235 Ga0501076_0026603 3300049592 Bacteria 4483
236 Ga0501076_0238278 3300049592 Bacteria 1488
237 Ga0501076_0296945 3300049592 Unclassified 1324
238 Ga0501259_000477 3300049688 Bacteria 6387
239 Ga0501079_0023678 3300049741 Bacteria 4712
240 Ga0501044_0564528 3300049823 Bacteria 1034
241 Ga0501045_0024558 3300049824 Bacteria 4328
242 nmdc:mga03683_92024_c1 3300050489 Unclassified 1323
243 nmdc:mga0yw44_37184_c1 3300050492 Bacteria 2873
244 nmdc:mga0yw44_75883_c1 3300050492 Bacteria 2097
245 nmdc:mga0k408_220457_c1 3300050493 Bacteria 1132
246 nmdc:mga06z11_13089_c1 3300050494 Bacteria 3631
247 nmdc:mga06z11_22367_c1 3300050494 Bacteria 2952
248 nmdc:mga05p37_137482_c1 3300050507 Bacteria 2995
249 nmdc:mga05p37_447684_c1 3300050507 Bacteria 1496
250 nmdc:mga06r32_3700_c1 3300050510 Bacteria 13661
251 nmdc:mga08y16_215790_c1 3300050511 Bacteria 1987
252 nmdc:mga08y16_362319_c1 3300050511 Bacteria 1488
253 nmdc:mga0n895_192044_c1 3300050512 Bacteria 2073
254 nmdc:mga0n895_63603_c1 3300050512 Bacteria 3648
255 nmdc:mga0rr50_14412_c1 3300050513 Bacteria 5184
256 nmdc:mga0rr50_17_c2 3300050513 Bacteria 129969
257 nmdc:mga08x19_2308_c1 3300050514 Bacteria 11590
258 Ga0495619_0157230 3300053085 Bacteria 1569
259 Ga0500641_0006019 3300053096 Bacteria 4293
260 Ga0500568_0002853 3300053139 Bacteria 9948
261 Ga0501084_0013239 3300054114 Bacteria 6827
262 Ga0501084_0031143 3300054114 Bacteria 4462
263 Ga0501084_0254181 3300054114 Bacteria 1483
264 Ga0501082_0133364 3300060353 Bacteria 2155
265 Ga0501082_0138784 3300060353 Bacteria 2110
266 Ga0501082_0139552 3300060353 Bacteria 2104
267 Ga0530510_0010625 3300061734 Bacteria 6455
268 2524001897 2523533628 Bacteria 4098242
269 2808874479 2808606365 Bacteria 4301966
270 Ga0111539_10101868
271 Ga0065715_10120451
272 Ga0065715_10121401
273 Ga0065707_10012846
274 Ga0070683_100021936
275 Ga0070670_100010791
276 Ga0070670_100066578
277 Ga0068869_100133518
278 Ga0070666_10001370
279 Ga0070666_10143351
280 Ga0070682_100000007
281 Ga0068868_100000300
282 Ga0068868_100109174
283 Ga0070689_100000767
284 Ga0070689_100154639
285 Ga0070692_10008579
286 Ga0070671_100211603
287 Ga0070674_100095328
288 Ga0070659_100125100
289 Ga0070713_100018482
290 Ga0070700_100021809
291 Ga0070708_100005557
292 Ga0070708_100011643
293 Ga0070708_100148770
294 Ga0070708_100158979
295 Ga0070681_10359052
296 Ga0070706_100039133
297 Ga0070707_100002888
298 Ga0070707_100009669
299 Ga0070707_100014765
300 Ga0070698_100024127
301 Ga0070699_100167220
302 Ga0070697_100405591
303 Ga0070672_100000216
304 Ga0070696_100165025
305 Ga0070693_100016206
306 Ga0070665_100213773
307 Ga0070664_100003615
308 Ga0068854_100494628
309 Ga0068859_100350133
310 Ga0068864_100000028
311 Ga0068864_100319482
312 Ga0068866_10000010
313 Ga0068866_10181030
314 Ga0068861_100210482
315 Ga0068863_100430943
316 Ga0068858_100024255
317 Ga0068858_100367389
318 Ga0081539_10103500
319 Ga0070717_10019835
320 Ga0070717_10351391
321 Ga0075368_10053029
322 Ga0075364_10044382
323 Ga0070716_100086031
324 Ga0075362_10002808
325 Ga0075367_10004610
326 Ga0075367_10083235
327 Ga0075366_10010852
328 Ga0075366_10066922
329 Ga0075366_10130239
330 Ga0097621_100342992
331 Ga0075370_10020676
332 Ga0075428_100000561
333 Ga0075428_100011815
334 Ga0075431_100001856
335 Ga0075434_100096242
336 Ga0075429_100010044
337 Ga0075436_100005897
338 Ga0075436_100075788
339 Ga0097620_100350143
340 Ga0075435_100000066
341 Ga0075435_100007313
342 Ga0075435_100017819
343 Ga0075435_100034386
344 Ga0105240_10000859
345 Ga0105240_10002329
346 Ga0105240_10116810
347 Ga0111539_10159931
348 Ga0105245_10000054
349 Ga0105245_10001219
350 Ga0105245_10185079
351 Ga0105247_10028272
352 Ga0114129_10048587
353 Ga0114129_10109139
354 Ga0105243_10171875
355 Ga0105241_10175958
356 Ga0105242_10000033
357 Ga0105248_10133009
358 Ga0105238_10434771
359 Ga0105249_10097466
360 Ga0105249_10193116
361 Ga0105249_10566759
362 Ga0105239_10000158
363 Ga0105239_10049119
364 Ga0105239_10252356
365 Ga0157369_10000065
366 Ga0163162_10325661
367 Ga0157375_10000005
368 Ga0157380_10040422
369 Ga0157380_10225285
370 Ga0157380_10383010
371 Ga0157379_10110571
372 Ga0157376_10007491
373 Ga0207642_10000011
374 Ga0207710_10027258
375 Ga0207680_10000758
376 Ga0207680_10187401
377 Ga0207645_10007927
378 Ga0207707_10438337
379 Ga0207695_10001410
380 Ga0207695_10001546
381 Ga0207695_10085667
382 Ga0207695_10181227
383 Ga0207662_10004273
384 Ga0207646_10009365
385 Ga0207646_10010983
386 Ga0207646_10015796
387 Ga0207646_10030193
388 Ga0207681_10064964
389 Ga0207650_10108750
390 Ga0207650_10214603
391 Ga0207659_10111002
392 Ga0207687_10000548
393 Ga0207700_10005831
394 Ga0207644_10187304
395 Ga0207706_10055875
396 Ga0207686_10000040
397 Ga0207709_10082688
398 Ga0207670_10002597
399 Ga0207670_10086357
400 Ga0207669_10089629
401 Ga0207704_10010208
402 Ga0207704_10044703
403 Ga0207704_10344850
404 Ga0207665_10034136
405 Ga0207691_10000767
406 Ga0207691_10014688
407 Ga0207711_10021474
408 Ga0207689_10114302
409 Ga0207689_10116161
410 Ga0207661_10005260
411 Ga0207679_10013863
412 Ga0207667_10216890
413 Ga0207651_10079694
414 Ga0207651_10107806
415 Ga0207712_10109832
416 Ga0207677_10000038
417 Ga0207703_10004272
418 Ga0207703_10016807
419 Ga0207703_10144159
420 Ga0207703_10253942
421 Ga0207708_10002827
422 Ga0207648_10447272
423 Ga0207676_10000002
424 Ga0207676_10244982
425 Ga0207674_10006754
426 Ga0207675_100083342
427 Ga0207683_10288016
428 Ga0268266_10246733
429 Ga0268265_10444714
430 Ga0307515_10000005
431 Ga0265330_10000149
432 Ga0265332_10000301
433 Ga0265332_10002286
434 Ga0265329_10003111
435 Ga0265331_10031262
436 Ga0265316_10000007
437 Ga0307408_100002925
438 Ga0307408_100203328
439 Ga0265314_10000005
440 Ga0265342_10000005
441 Ga0265342_10027372
442 Ga0307405_10004783
443 Ga0307410_10278304
444 Ga0307406_10042636
445 Ga0307407_10272600
446 Ga0307416_100031737
447 Ga0307416_100082830
448 Ga0307416_100228403
449 Ga0307411_10262883
450 Ga0316583_10010195
451 Ga0316580_10009185
452 Ga0373932_0000397
453 Ga0373931_0065922
454 Ga0373935_0172520
455 Ga0316582_0014315
456 Ga0395905_0351147
457 Ga0436364_0478677
458 Ga0400490_09629
459 Ga0400489_02519
460 Ga0439431_0025872
461 Ga0439449_0066272
462 Ga0451577_0094148
463 Ga0453683_0175389
464 Ga0453684_0000192
465 Ga0453684_0003553
466 Ga0453684_0018613
467 Ga0466960_0010727
468 Ga0466959_0077640
469 Ga0451576_0000438
470 Ga0451576_0001183
471 Ga0451576_0328852
472 Ga0451576_0519988
473 Ga0495653_0126962
474 Ga0495594_0063510
475 Ga0495667_0085943
476 Ga0495635_0044888
477 Ga0495626_0010742
478 Ga0496101_0216410
479 Ga0496109_0178780
480 Ga0496112_0145555
481 Ga0496113_0035131
482 Ga0496113_0347641
483 Ga0501031_0088037
484 Ga0501034_0035471
485 Ga0501034_0378260
486 Ga0501036_0008248
487 Ga0501036_0070874
488 Ga0501039_0017428
489 Ga0501040_0207830
490 Ga0501041_0067047
491 Ga0501042_0003775
492 Ga0501042_0032267
493 Ga0501047_0190316
494 Ga0501069_0066625
495 Ga0501070_0146394
496 Ga0501070_0253663
497 Ga0501071_0028058
498 Ga0501071_0031804
499 Ga0501072_0083183
500 Ga0501072_0136653
501 Ga0501074_0322415
502 Ga0501075_0003760
503 Ga0501076_0005846
504 Ga0501076_0026603
505 Ga0501076_0238278
506 Ga0501076_0296945
507 Ga0501259_000477
508 Ga0501079_0023678
509 Ga0501044_0564528
510 Ga0501045_0024558
511 nmdc:mga03683_92024_c1
512 nmdc:mga0yw44_37184_c1
513 nmdc:mga0yw44_75883_c1
514 nmdc:mga0k408_220457_c1
515 nmdc:mga06z11_13089_c1
516 nmdc:mga06z11_22367_c1
517 nmdc:mga05p37_137482_c1
518 nmdc:mga05p37_447684_c1
519 nmdc:mga06r32_3700_c1
520 nmdc:mga08y16_215790_c1
521 nmdc:mga08y16_362319_c1
522 nmdc:mga0n895_192044_c1
523 nmdc:mga0n895_63603_c1
524 nmdc:mga0rr50_14412_c1
525 nmdc:mga0rr50_17_c2
526 nmdc:mga08x19_2308_c1
527 Ga0495619_0157230
528 Ga0500641_0006019
529 Ga0500568_0002853
530 Ga0501084_0013239
531 Ga0501084_0031143
532 Ga0501084_0254181
533 Ga0501082_0133364
534 Ga0501082_0138784
535 Ga0501082_0139552
536 Ga0530510_0010625
537 2524001897
538 2808874479

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02911

Formyl_trans_C

Formyl transferase, C-terminal domain

207

331

0.97

PF00551

Formyl_trans_N

Formyl transferase

5

184

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
4iqf-assembly2.cif.gz_B crystal structure of methyionyl-trna formyltransferase from bacillus anthracis 0.9651 7 317
3tqq-assembly1.cif.gz_A structure of the methionyl-trna formyltransferase (fmt) from coxiella burnetii 0.9545 5 315
4iqf-assembly2.cif.gz_B crystal structure of methyionyl-trna formyltransferase from bacillus anthracis 0.9532 7 317
3tqq-assembly1.cif.gz_A structure of the methionyl-trna formyltransferase (fmt) from coxiella burnetii 0.9484 5 315
5uai-assembly1.cif.gz_A crystal structure of methionyl-trna formyltransferase from pseudomonas aeruginosa 0.9478 7 315
ID Description Score Start End Superfamily
3tqqA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Formyl transferase, N-terminal domain 0.9745 7 211 3.40.50.170
3tqqA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Formyl transferase, N-terminal domain 0.9646 7 211 3.40.50.170
3rfoA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Formyl transferase, N-terminal domain 0.9635 7 211 3.40.50.170
af_P9WND3_1_310_3.40.50.12230 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9454 7 306 3.40.50.12230
3rfoA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Formyl transferase, N-terminal domain 0.9452 7 211 3.40.50.170
ID Description Score Start End GO Terms
AF-A0A2V7K666-F1-model_v4 methionyl-tRNA formyltransferase (EC 2.1.2.9) 0.9935 7 130 GO:0004479
GO:0005829
AF-A0A382L434-F1-model_v4 methionyl-tRNA formyltransferase (EC 2.1.2.9) 0.9925 29 207 GO:0004479
GO:0005829
AF-A0A538E3I9-F1-model_v4 methionyl-tRNA formyltransferase (EC 2.1.2.9) 0.991 7 180 GO:0004479
GO:0005829
AF-A0A3M1CS93-F1-model_v4 methionyl-tRNA formyltransferase (EC 2.1.2.9) 0.9898 7 141 GO:0004479
GO:0005829
AF-A0A3M1ABA1-F1-model_v4 methionyl-tRNA formyltransferase (EC 2.1.2.9) 0.9887 7 211 GO:0004479
GO:0005829

Map