F376173

General Info

Members Datasets Scaffolds Average Seq Length
269 188 538 497

Family's Representative Sequence

Representative Sequence 3300009098|Ga0105245_10000347|Ga0105245_1000034723
Length 536
Sequence VPTSSAHPAAASMRLIFESLLRILSVDYSYYNTFSPFMLDISRADLVAGVAGSGTMGRGIIQVLAQCGMRTLVFDAQPDAARRAKAAIGETLGKLAERGKLERGAADAALGRIEVVERLEALAPCQLVVEAIVEDLGAKRELFSRLEGVVGPDTVLASNTSSLSVTAMAAACKRPQRVAGYHFFNPVPVMKVVEVVAGELTEHWVTDALSELARRFGHTPIACKDTPGFVVNHAGRAYVPEALRILSEGVADFSTIDRILVDAAGFRLGPFGLMDLVGLDVSHAVMKSMYQQYFEEPKYKPSFLCEPRVAAGLLGRKTGRGWYSYGKDGTAEPAPDQPIPNAKKPESVWAVPELKELLGKLEARMTAKPDAAAVCFVAPLGKDATTSALELGLDPRRTLAVDPLFGFSKRRTLMPTPVTTHEVKESAHSLLGSDGVPVSVIKDSPGFVAQRVVAHIVNVGCDIAQMRIATPEDLDRAVVLGLSYPRGPLAMGDAAGAARVLAVLEAMHDFYQEPRYRPSPWLKRRAKLGISLLSAE

Samples

Sample ID Description Type Environment
1 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
2 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
3 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
9 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
13 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
14 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
15 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
16 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
17 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
18 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
19 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
20 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
21 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
22 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
23 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
24 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
25 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
26 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
27 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
28 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
29 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
30 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
31 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
32 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
33 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
34 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
35 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
36 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
37 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
38 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
39 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
40 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
41 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
42 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
43 3300006194 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 Metagenome Rhizosphere
44 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
45 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
46 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
47 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
48 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
49 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
50 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
51 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
52 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
53 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
54 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
55 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
56 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
57 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
58 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
59 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
60 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
61 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
62 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
63 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
90 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
93 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
94 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
95 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
96 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
97 3300034818 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 Metagenome Rhizosphere
98 3300034957 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_2 Metagenome Rhizosphere
99 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
100 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
101 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
102 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
103 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
104 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
105 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
106 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
107 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
108 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
109 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
110 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
111 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
112 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
113 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
114 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
115 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
116 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
117 3300042001 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z081617_5542 Metagenome Rhizosphere
118 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
119 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
120 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
121 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
122 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
123 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
124 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
125 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
126 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
127 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
128 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
129 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
130 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
131 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
132 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
133 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
134 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
135 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
136 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
137 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
138 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
139 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
140 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
141 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
142 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
143 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
144 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
145 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
146 3300049522 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C24_B_7_control Metagenome Rhizosphere
147 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
148 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
149 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
150 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
151 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
152 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
153 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
156 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
157 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
158 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
159 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
160 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
161 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
162 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
163 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
164 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
165 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
166 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
167 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
168 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
169 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
170 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
171 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
172 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
173 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
174 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
175 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
176 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
177 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
178 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
179 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
180 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
181 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
182 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
183 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
184 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
185 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
186 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
187 2643221547 Pseudolabrys sp. Root1462 Isolate Unclassified
188 2842333319 Skermanella aerolata SEMIA 4010 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 99.26
Metatranscriptomes 0
Isolates 0.74

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.37
Nodule 0.37
Rhizoplane 1.12
Rhizosphere 96.65
Stem 0
Stem Tuber 0
Unclassified 1.86

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105245_10000347 3300009098 Bacteria 43236
2 Ga0070690_100000148 3300005330 Bacteria 35769
3 Ga0068869_100000103 3300005334 Bacteria 39927
4 Ga0070680_100000882 3300005336 Bacteria 21272
5 Ga0070682_100002454 3300005337 Bacteria 10241
6 Ga0068868_100013186 3300005338 Bacteria 6054
7 Ga0070689_100001211 3300005340 Bacteria 16347
8 Ga0070687_100000105 3300005343 Bacteria 28128
9 Ga0070687_100073791 3300005343 Bacteria 1840
10 Ga0070692_10002047 3300005345 Bacteria 7669
11 Ga0070669_100026249 3300005353 Bacteria 4190
12 Ga0070675_100009790 3300005354 Bacteria 7467
13 Ga0070701_10004680 3300005438 Bacteria 5575
14 Ga0070711_100115147 3300005439 Bacteria 1979
15 Ga0070705_100000580 3300005440 Bacteria 21256
16 Ga0070705_100004947 3300005440 Bacteria 6490
17 Ga0070700_100047132 3300005441 Bacteria 2666
18 Ga0070694_100000110 3300005444 Bacteria 39928
19 Ga0070694_100024503 3300005444 Bacteria 3894
20 Ga0070694_100042697 3300005444 Bacteria 3030
21 Ga0070681_10003414 3300005458 Bacteria 14878
22 Ga0068867_100000845 3300005459 Bacteria 20621
23 Ga0068867_100022129 3300005459 Bacteria 4542
24 Ga0070706_100096483 3300005467 Bacteria 2744
25 Ga0070699_100105254 3300005518 Bacteria 2475
26 Ga0070679_100184301 3300005530 Bacteria 2059
27 Ga0070697_100007250 3300005536 Bacteria 8625
28 Ga0070686_100000599 3300005544 Bacteria 21280
29 Ga0070695_100000259 3300005545 Bacteria 26538
30 Ga0070695_100093280 3300005545 Bacteria 2014
31 Ga0070695_100138919 3300005545 Bacteria 1682
32 Ga0070696_100000368 3300005546 Bacteria 27488
33 Ga0070696_100086720 3300005546 Bacteria 2223
34 Ga0070693_100000101 3300005547 Bacteria 37995
35 Ga0070704_100000350 3300005549 Bacteria 20885
36 Ga0070704_100007960 3300005549 Bacteria 6327
37 Ga0068855_100001986 3300005563 Bacteria 25406
38 Ga0068854_100022719 3300005578 Bacteria 4279
39 Ga0068856_100087349 3300005614 Bacteria 3100
40 Ga0070702_100000096 3300005615 Bacteria 26117
41 Ga0068859_100066045 3300005617 Bacteria 3652
42 Ga0068864_100022928 3300005618 Bacteria 5238
43 Ga0068866_10000366 3300005718 Bacteria 21250
44 Ga0068861_100002362 3300005719 Bacteria 12279
45 Ga0068860_100001309 3300005843 Bacteria 27054
46 Ga0068862_100001562 3300005844 Bacteria 20897
47 Ga0068862_100007502 3300005844 Bacteria 9037
48 Ga0081455_10007616 3300005937 Bacteria 11379
49 Ga0081539_10002066 3300005985 Bacteria 30089
50 Ga0075432_10004632 3300006058 Bacteria 4682
51 Ga0070715_10033813 3300006163 Bacteria 2092
52 Ga0070716_100010867 3300006173 Bacteria 4578
53 Ga0075427_10000924 3300006194 Bacteria 3614
54 Ga0097621_100000106 3300006237 Bacteria 47435
55 Ga0075428_100000134 3300006844 Bacteria 65107
56 Ga0075428_100046800 3300006844 Bacteria 4751
57 Ga0075428_100098237 3300006844 Bacteria 3192
58 Ga0075428_100175609 3300006844 Bacteria 2320
59 Ga0075430_100015048 3300006846 Bacteria 6585
60 Ga0075430_100016859 3300006846 Bacteria 6222
61 Ga0075430_100018040 3300006846 Bacteria 6006
62 Ga0075431_100004263 3300006847 Bacteria 14008
63 Ga0075431_100192190 3300006847 Bacteria 2091
64 Ga0075433_10000023 3300006852 Bacteria 59195
65 Ga0075433_10009655 3300006852 Bacteria 7723
66 Ga0075433_10014924 3300006852 Bacteria 6358
67 Ga0075434_100000593 3300006871 Bacteria 27994
68 Ga0075434_100000937 3300006871 Bacteria 23450
69 Ga0075434_100093628 3300006871 Unclassified 3008
70 Ga0075429_100000227 3300006880 Bacteria 38168
71 Ga0075429_100000955 3300006880 Bacteria 22912
72 Ga0068865_100000231 3300006881 Bacteria 31031
73 Ga0068865_100015573 3300006881 Bacteria 4850
74 Ga0075436_100000407 3300006914 Bacteria 27718
75 Ga0075436_100028559 3300006914 Bacteria 3837
76 Ga0075436_100034078 3300006914 Bacteria 3510
77 Ga0097620_100066042 3300006931 Bacteria 3652
78 Ga0075435_100000435 3300007076 Bacteria 25542
79 Ga0075435_100034771 3300007076 Bacteria 3995
80 Ga0075435_100045202 3300007076 Unclassified 3529
81 Ga0111539_10000561 3300009094 Bacteria 47610
82 Ga0111539_10058041 3300009094 Bacteria 4593
83 Ga0111539_10218573 3300009094 Bacteria 2219
84 Ga0114129_10023204 3300009147 Bacteria 8800
85 Ga0114129_10103925 3300009147 Bacteria 3927
86 Ga0114129_10114039 3300009147 Bacteria 3726
87 Ga0105243_10000535 3300009148 Bacteria 38636
88 Ga0105241_10011330 3300009174 Bacteria 6538
89 Ga0105242_10000905 3300009176 Bacteria 23036
90 Ga0105242_10001418 3300009176 Bacteria 18885
91 Ga0105249_10001515 3300009553 Bacteria 20389
92 Ga0105239_10073481 3300010375 Bacteria 3759
93 Ga0157378_10000447 3300013297 Bacteria 39662
94 Ga0207653_10005017 3300025885 Bacteria 4137
95 Ga0207642_10002342 3300025899 Bacteria 5912
96 Ga0207685_10023603 3300025905 Bacteria 2096
97 Ga0207643_10005091 3300025908 Bacteria 7036
98 Ga0207654_10009925 3300025911 Bacteria 4841
99 Ga0207707_10004138 3300025912 Bacteria 12848
100 Ga0207663_10034678 3300025916 Bacteria 3020
101 Ga0207660_10014794 3300025917 Bacteria 5142
102 Ga0207660_10019300 3300025917 Bacteria 4555
103 Ga0207662_10000109 3300025918 Bacteria 39758
104 Ga0207662_10086328 3300025918 Bacteria 1923
105 Ga0207652_10007977 3300025921 Bacteria 8496
106 Ga0207681_10009115 3300025923 Bacteria 6061
107 Ga0207687_10001220 3300025927 Bacteria 17591
108 Ga0207686_10003414 3300025934 Bacteria 8525
109 Ga0207670_10017497 3300025936 Bacteria 4332
110 Ga0207670_10025738 3300025936 Bacteria 3698
111 Ga0207704_10004768 3300025938 Bacteria 6226
112 Ga0207704_10011576 3300025938 Bacteria 4348
113 Ga0207665_10021487 3300025939 Bacteria 4244
114 Ga0207665_10093716 3300025939 Bacteria 2085
115 Ga0207689_10000532 3300025942 Bacteria 36122
116 Ga0207689_10019206 3300025942 Bacteria 5762
117 Ga0207667_10021185 3300025949 Bacteria 7208
118 Ga0207712_10002829 3300025961 Bacteria 11120
119 Ga0207712_10003798 3300025961 Bacteria 9527
120 Ga0207640_10057727 3300025981 Bacteria 2554
121 Ga0207677_10002506 3300026023 Bacteria 9627
122 Ga0207703_10011836 3300026035 Bacteria 6793
123 Ga0207708_10001862 3300026075 Bacteria 15546
124 Ga0207648_10000505 3300026089 Bacteria 43495
125 Ga0207648_10002083 3300026089 Bacteria 21780
126 Ga0207675_100000717 3300026118 Bacteria 32816
127 Ga0207675_100000760 3300026118 Bacteria 32073
128 Ga0207698_10126932 3300026142 Bacteria 2171
129 Ga0207428_10000292 3300027907 Bacteria 67070
130 Ga0207428_10023507 3300027907 Bacteria 5184
131 Ga0207428_10055188 3300027907 Bacteria 3160
132 Ga0268265_10011244 3300028380 Bacteria 6050
133 Ga0268264_10004078 3300028381 Bacteria 12508
134 Ga0265332_10001955 3300031238 Bacteria 10860
135 Ga0307408_100087463 3300031548 Bacteria 2345
136 Ga0316575_10003856 3300031665 Bacteria 5233
137 Ga0316579_10000293 3300031691 Bacteria 15342
138 Ga0307416_100027235 3300032002 Bacteria 4229
139 Ga0373950_0002796 3300034818 Bacteria 2441
140 Ga0373938_0004786 3300034957 Bacteria 2273
141 Ga0373926_0000423 3300035083 Bacteria 10880
142 Ga0373928_0001352 3300035084 Bacteria 4810
143 Ga0373944_0011911 3300035089 Bacteria 2390
144 Ga0373951_0009980 3300035091 Bacteria 2132
145 Ga0373952_0011723 3300035092 Bacteria 1714
146 Ga0373932_0009853 3300035112 Bacteria 2304
147 Ga0373936_0023684 3300035113 Bacteria 2394
148 Ga0373936_0046157 3300035113 Bacteria 1756
149 Ga0373939_0001027 3300035114 Bacteria 6877
150 Ga0373953_0013536 3300035117 Bacteria 2915
151 Ga0373954_0000011 3300035118 Bacteria 74083
152 Ga0373961_0006513 3300035241 Bacteria 2804
153 Ga0316574_0001610 3300035398 Bacteria 10826
154 Ga0373931_0000483 3300035691 Bacteria 16244
155 Ga0373931_0026229 3300035691 Bacteria 2964
156 Ga0373935_0103066 3300035692 Bacteria 1884
157 Ga0373927_0014579 3300035695 Bacteria 5200
158 Ga0373933_0001819 3300035724 Bacteria 12364
159 Ga0373937_0001291 3300036401 Bacteria 20976
160 Ga0373937_0011122 3300036401 Bacteria 7887
161 Ga0373937_0042218 3300036401 Bacteria 4161
162 Ga0373937_0105054 3300036401 Bacteria 2624
163 Ga0316582_0044967 3300036647 Bacteria 2778
164 Ga0439441_003771 3300042001 Bacteria 2259
165 Ga0439435_0010292 3300042436 Bacteria 2215
166 Ga0439460_0025304 3300042461 Bacteria 1651
167 Ga0451577_0079121 3300042876 Bacteria 2931
168 Ga0451576_0004079 3300045051 Bacteria 19295
169 Ga0451576_0039900 3300045051 Bacteria 4969
170 Ga0466967_0002278 3300045976 Bacteria 11844
171 Ga0495651_0077522 3300046462 Bacteria 2516
172 Ga0495639_0047911 3300046475 Bacteria 1937
173 Ga0495594_0004575 3300046499 Bacteria 7118
174 Ga0495594_0026227 3300046499 Bacteria 3134
175 Ga0495583_0000255 3300046506 Bacteria 88289
176 Ga0495643_0021851 3300046522 Bacteria 3662
177 Ga0495642_0005193 3300046528 Bacteria 5010
178 Ga0495642_0022268 3300046528 Bacteria 2496
179 Ga0495597_0000739 3300046542 Bacteria 26035
180 Ga0495597_0021157 3300046542 Bacteria 3024
181 Ga0495597_0051885 3300046542 Bacteria 1807
182 Ga0495622_0009152 3300046557 Bacteria 4584
183 Ga0495661_0000671 3300046665 Bacteria 34227
184 Ga0495588_0007811 3300046674 Bacteria 4885
185 Ga0495657_0006010 3300046675 Bacteria 9532
186 Ga0495647_0002360 3300046681 Bacteria 5933
187 Ga0495658_0055895 3300046683 Bacteria 2249
188 Ga0495604_0029141 3300047317 Bacteria 4392
189 Ga0495676_0000168 3300047321 Bacteria 50798
190 Ga0495686_0000391 3300047472 Bacteria 69897
191 Ga0496104_0005648 3300048907 Bacteria 10953
192 Ga0496113_0003286 3300048916 Bacteria 9655
193 Ga0496115_0020715 3300048918 Bacteria 5074
194 Ga0496122_0001749 3300048925 Bacteria 33464
195 Ga0496123_0001412 3300048926 Bacteria 33573
196 Ga0496125_0002537 3300048928 Bacteria 23538
197 Ga0495682_0001005 3300049460 Bacteria 16832
198 Ga0501299_013730 3300049522 Bacteria 1401
199 Ga0501031_0023509 3300049568 Bacteria 4017
200 Ga0501032_0011567 3300049569 Bacteria 6333
201 Ga0501033_0012067 3300049570 Bacteria 6595
202 Ga0501036_0000124 3300049572 Bacteria 48755
203 Ga0501036_0016211 3300049572 Bacteria 6223
204 Ga0501038_0006620 3300049574 Bacteria 10715
205 Ga0501039_0000168 3300049575 Bacteria 45750
206 Ga0501040_0000194 3300049576 Bacteria 35298
207 Ga0501040_0052645 3300049576 Bacteria 2787
208 Ga0501041_0004976 3300049577 Bacteria 7730
209 Ga0501042_0010627 3300049578 Bacteria 6182
210 Ga0501043_0027246 3300049579 Bacteria 4487
211 Ga0501046_0000501 3300049580 Bacteria 39127
212 Ga0501046_0033181 3300049580 Bacteria 4174
213 Ga0501048_0005362 3300049582 Bacteria 9751
214 Ga0501070_0029015 3300049586 Bacteria 4640
215 Ga0501071_0011703 3300049587 Bacteria 5922
216 Ga0501071_0013140 3300049587 Bacteria 5636
217 Ga0501072_0000412 3300049588 Bacteria 30560
218 Ga0501072_0000728 3300049588 Bacteria 23983
219 Ga0501072_0029770 3300049588 Bacteria 4267
220 Ga0501074_0013832 3300049590 Bacteria 5869
221 Ga0501074_0227401 3300049590 Bacteria 1328
222 Ga0501075_0000046 3300049591 Bacteria 50813
223 Ga0501075_0115576 3300049591 Bacteria 2040
224 Ga0501076_0001789 3300049592 Bacteria 14574
225 Ga0501076_0017333 3300049592 Bacteria 5473
226 Ga0501076_0032804 3300049592 Bacteria 4055
227 Ga0501077_0016568 3300049593 Bacteria 4643
228 Ga0501079_0003148 3300049741 Bacteria 12097
229 Ga0501079_0010159 3300049741 Bacteria 7146
230 Ga0501081_0000517 3300049743 Bacteria 21705
231 Ga0501081_0016951 3300049743 Bacteria 4815
232 Ga0501035_0027144 3300049822 Bacteria 5235
233 Ga0501044_0093382 3300049823 Bacteria 3034
234 Ga0501045_0000436 3300049824 Bacteria 25558
235 Ga0501045_0041530 3300049824 Bacteria 3347
236 Ga0501045_0161247 3300049824 Bacteria 1669
237 nmdc:mga05p37_1109_c1 3300050507 Bacteria 30953
238 nmdc:mga05p37_90447_c1 3300050507 Bacteria 3772
239 nmdc:mga09592_438_c1 3300050508 Bacteria 30676
240 nmdc:mga09592_470_c1 3300050508 Bacteria 30193
241 nmdc:mga0qj67_115932_c1 3300050509 Bacteria 2165
242 nmdc:mga0qj67_1459_c1 3300050509 Bacteria 16581
243 nmdc:mga0qj67_64532_c1 3300050509 Bacteria 2913
244 nmdc:mga06r32_18682_c1 3300050510 Bacteria 6352
245 nmdc:mga08y16_2424_c1 3300050511 Bacteria 19158
246 nmdc:mga08y16_42674_c1 3300050511 Bacteria 4750
247 nmdc:mga0n895_2848_c1 3300050512 Bacteria 13703
248 nmdc:mga0n895_64443_c1 3300050512 Unclassified 3625
249 nmdc:mga0rr50_36203_c1 3300050513 Bacteria 2762
250 nmdc:mga0rr50_52942_c1 3300050513 Unclassified 3018
251 nmdc:mga0rr50_802_c2 3300050513 Bacteria 5041
252 nmdc:mga08x19_11525_c1 3300050514 Bacteria 5321
253 nmdc:mga08x19_24208_c1 3300050514 Bacteria 3771
254 nmdc:mga08x19_5824_c1 3300050514 Bacteria 7289
255 nmdc:mga08x19_60873_c1 3300050514 Bacteria 2446
256 nmdc:mga0a205_11673_c1 3300050515 Bacteria 8100
257 nmdc:mga0a205_167044_c1 3300050515 Unclassified 2096
258 nmdc:mga0a205_37157_c1 3300050515 Bacteria 4682
259 nmdc:mga0a205_6599_c1 3300050515 Bacteria 10497
260 Ga0495612_0011488 3300053078 Bacteria 3571
261 Ga0495595_0008707 3300053084 Bacteria 4175
262 Ga0495619_0063430 3300053085 Bacteria 2461
263 Ga0500641_0005235 3300053096 Bacteria 4596
264 Ga0501084_0002243 3300054114 Bacteria 15506
265 Ga0501082_0001259 3300060353 Bacteria 22237
266 Ga0530510_0000342 3300061734 Bacteria 30062
267 Ga0530510_0036560 3300061734 Bacteria 3539
268 2643756125 2643221547 Bacteria 4740017
269 2842337890 2842333319 Bacteria 8899485
270 Ga0105245_10000347
271 Ga0070690_100000148
272 Ga0068869_100000103
273 Ga0070680_100000882
274 Ga0070682_100002454
275 Ga0068868_100013186
276 Ga0070689_100001211
277 Ga0070687_100000105
278 Ga0070687_100073791
279 Ga0070692_10002047
280 Ga0070669_100026249
281 Ga0070675_100009790
282 Ga0070701_10004680
283 Ga0070711_100115147
284 Ga0070705_100000580
285 Ga0070705_100004947
286 Ga0070700_100047132
287 Ga0070694_100000110
288 Ga0070694_100024503
289 Ga0070694_100042697
290 Ga0070681_10003414
291 Ga0068867_100000845
292 Ga0068867_100022129
293 Ga0070706_100096483
294 Ga0070699_100105254
295 Ga0070679_100184301
296 Ga0070697_100007250
297 Ga0070686_100000599
298 Ga0070695_100000259
299 Ga0070695_100093280
300 Ga0070695_100138919
301 Ga0070696_100000368
302 Ga0070696_100086720
303 Ga0070693_100000101
304 Ga0070704_100000350
305 Ga0070704_100007960
306 Ga0068855_100001986
307 Ga0068854_100022719
308 Ga0068856_100087349
309 Ga0070702_100000096
310 Ga0068859_100066045
311 Ga0068864_100022928
312 Ga0068866_10000366
313 Ga0068861_100002362
314 Ga0068860_100001309
315 Ga0068862_100001562
316 Ga0068862_100007502
317 Ga0081455_10007616
318 Ga0081539_10002066
319 Ga0075432_10004632
320 Ga0070715_10033813
321 Ga0070716_100010867
322 Ga0075427_10000924
323 Ga0097621_100000106
324 Ga0075428_100000134
325 Ga0075428_100046800
326 Ga0075428_100098237
327 Ga0075428_100175609
328 Ga0075430_100015048
329 Ga0075430_100016859
330 Ga0075430_100018040
331 Ga0075431_100004263
332 Ga0075431_100192190
333 Ga0075433_10000023
334 Ga0075433_10009655
335 Ga0075433_10014924
336 Ga0075434_100000593
337 Ga0075434_100000937
338 Ga0075434_100093628
339 Ga0075429_100000227
340 Ga0075429_100000955
341 Ga0068865_100000231
342 Ga0068865_100015573
343 Ga0075436_100000407
344 Ga0075436_100028559
345 Ga0075436_100034078
346 Ga0097620_100066042
347 Ga0075435_100000435
348 Ga0075435_100034771
349 Ga0075435_100045202
350 Ga0111539_10000561
351 Ga0111539_10058041
352 Ga0111539_10218573
353 Ga0114129_10023204
354 Ga0114129_10103925
355 Ga0114129_10114039
356 Ga0105243_10000535
357 Ga0105241_10011330
358 Ga0105242_10000905
359 Ga0105242_10001418
360 Ga0105249_10001515
361 Ga0105239_10073481
362 Ga0157378_10000447
363 Ga0207653_10005017
364 Ga0207642_10002342
365 Ga0207685_10023603
366 Ga0207643_10005091
367 Ga0207654_10009925
368 Ga0207707_10004138
369 Ga0207663_10034678
370 Ga0207660_10014794
371 Ga0207660_10019300
372 Ga0207662_10000109
373 Ga0207662_10086328
374 Ga0207652_10007977
375 Ga0207681_10009115
376 Ga0207687_10001220
377 Ga0207686_10003414
378 Ga0207670_10017497
379 Ga0207670_10025738
380 Ga0207704_10004768
381 Ga0207704_10011576
382 Ga0207665_10021487
383 Ga0207665_10093716
384 Ga0207689_10000532
385 Ga0207689_10019206
386 Ga0207667_10021185
387 Ga0207712_10002829
388 Ga0207712_10003798
389 Ga0207640_10057727
390 Ga0207677_10002506
391 Ga0207703_10011836
392 Ga0207708_10001862
393 Ga0207648_10000505
394 Ga0207648_10002083
395 Ga0207675_100000717
396 Ga0207675_100000760
397 Ga0207698_10126932
398 Ga0207428_10000292
399 Ga0207428_10023507
400 Ga0207428_10055188
401 Ga0268265_10011244
402 Ga0268264_10004078
403 Ga0265332_10001955
404 Ga0307408_100087463
405 Ga0316575_10003856
406 Ga0316579_10000293
407 Ga0307416_100027235
408 Ga0373950_0002796
409 Ga0373938_0004786
410 Ga0373926_0000423
411 Ga0373928_0001352
412 Ga0373944_0011911
413 Ga0373951_0009980
414 Ga0373952_0011723
415 Ga0373932_0009853
416 Ga0373936_0023684
417 Ga0373936_0046157
418 Ga0373939_0001027
419 Ga0373953_0013536
420 Ga0373954_0000011
421 Ga0373961_0006513
422 Ga0316574_0001610
423 Ga0373931_0000483
424 Ga0373931_0026229
425 Ga0373935_0103066
426 Ga0373927_0014579
427 Ga0373933_0001819
428 Ga0373937_0001291
429 Ga0373937_0011122
430 Ga0373937_0042218
431 Ga0373937_0105054
432 Ga0316582_0044967
433 Ga0439441_003771
434 Ga0439435_0010292
435 Ga0439460_0025304
436 Ga0451577_0079121
437 Ga0451576_0004079
438 Ga0451576_0039900
439 Ga0466967_0002278
440 Ga0495651_0077522
441 Ga0495639_0047911
442 Ga0495594_0004575
443 Ga0495594_0026227
444 Ga0495583_0000255
445 Ga0495643_0021851
446 Ga0495642_0005193
447 Ga0495642_0022268
448 Ga0495597_0000739
449 Ga0495597_0021157
450 Ga0495597_0051885
451 Ga0495622_0009152
452 Ga0495661_0000671
453 Ga0495588_0007811
454 Ga0495657_0006010
455 Ga0495647_0002360
456 Ga0495658_0055895
457 Ga0495604_0029141
458 Ga0495676_0000168
459 Ga0495686_0000391
460 Ga0496104_0005648
461 Ga0496113_0003286
462 Ga0496115_0020715
463 Ga0496122_0001749
464 Ga0496123_0001412
465 Ga0496125_0002537
466 Ga0495682_0001005
467 Ga0501299_013730
468 Ga0501031_0023509
469 Ga0501032_0011567
470 Ga0501033_0012067
471 Ga0501036_0000124
472 Ga0501036_0016211
473 Ga0501038_0006620
474 Ga0501039_0000168
475 Ga0501040_0000194
476 Ga0501040_0052645
477 Ga0501041_0004976
478 Ga0501042_0010627
479 Ga0501043_0027246
480 Ga0501046_0000501
481 Ga0501046_0033181
482 Ga0501048_0005362
483 Ga0501070_0029015
484 Ga0501071_0011703
485 Ga0501071_0013140
486 Ga0501072_0000412
487 Ga0501072_0000728
488 Ga0501072_0029770
489 Ga0501074_0013832
490 Ga0501074_0227401
491 Ga0501075_0000046
492 Ga0501075_0115576
493 Ga0501076_0001789
494 Ga0501076_0017333
495 Ga0501076_0032804
496 Ga0501077_0016568
497 Ga0501079_0003148
498 Ga0501079_0010159
499 Ga0501081_0000517
500 Ga0501081_0016951
501 Ga0501035_0027144
502 Ga0501044_0093382
503 Ga0501045_0000436
504 Ga0501045_0041530
505 Ga0501045_0161247
506 nmdc:mga05p37_1109_c1
507 nmdc:mga05p37_90447_c1
508 nmdc:mga09592_438_c1
509 nmdc:mga09592_470_c1
510 nmdc:mga0qj67_115932_c1
511 nmdc:mga0qj67_1459_c1
512 nmdc:mga0qj67_64532_c1
513 nmdc:mga06r32_18682_c1
514 nmdc:mga08y16_2424_c1
515 nmdc:mga08y16_42674_c1
516 nmdc:mga0n895_2848_c1
517 nmdc:mga0n895_64443_c1
518 nmdc:mga0rr50_36203_c1
519 nmdc:mga0rr50_52942_c1
520 nmdc:mga0rr50_802_c2
521 nmdc:mga08x19_11525_c1
522 nmdc:mga08x19_24208_c1
523 nmdc:mga08x19_5824_c1
524 nmdc:mga08x19_60873_c1
525 nmdc:mga0a205_11673_c1
526 nmdc:mga0a205_167044_c1
527 nmdc:mga0a205_37157_c1
528 nmdc:mga0a205_6599_c1
529 Ga0495612_0011488
530 Ga0495595_0008707
531 Ga0495619_0063430
532 Ga0500641_0005235
533 Ga0501084_0002243
534 Ga0501082_0001259
535 Ga0530510_0000342
536 Ga0530510_0036560
537 2643756125
538 2842337890

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02737

3HCDH_N

3-hydroxyacyl-CoA dehydrogenase, NAD binding domain

47

226

0.99

PF00725

3HCDH

3-hydroxyacyl-CoA dehydrogenase, C-terminal domain

446

531

0.98

PF00725

3HCDH

3-hydroxyacyl-CoA dehydrogenase, C-terminal domain

228

325

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
4j33-assembly1.cif.gz_A crystal structure of kynurenine 3-monooxygenase (kmo-394) 0.9765 8 38
5nmw-assembly1.cif.gz_A-2 crystal structure of the pyrrolizidine alkaloid n-oxygenase from zonocerus variegatus in complex with fad 0.9693 9 37
4rep-assembly1.cif.gz_A crystal structure of gamma-carotenoid desaturase 0.9645 9 41
4j33-assembly2.cif.gz_B crystal structure of kynurenine 3-monooxygenase (kmo-394) 0.9621 8 42
4j36-assembly1.cif.gz_A cocrystal structure of kynurenine 3-monooxygenase in complex with upf 648 inhibitor(kmo-394upf) 0.9618 10 42
ID Description Score Start End Superfamily
af_Q4DRR6_1_276_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9943 9 38 3.50.50.60
3mogC01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9825 8 191 3.40.50.720
af_Q54VB8_19_206_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9813 10 191 3.40.50.720
4kuhA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9772 11 191 3.40.50.720
af_A4HWA7_1_176_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9723 9 41 3.50.50.60
ID Description Score Start End GO Terms
AF-A0A2A4MBY5-F1-model_v4 deleted 0.9931 382 499
AF-Q9F7E8-F1-model_v4 3-hydroxybutyryl CoA dehydrogenase 0.9888 8 180 GO:0006635
GO:0008691
GO:0070403
AF-A0A0L8QFE2-F1-model_v4 deleted 0.9868 81 158
AF-A0A6N3UGM3-F1-model_v4 deleted 0.9855 361 497
AF-A0A6I2VRB6-F1-model_v4 3-hydroxybutyryl-CoA dehydrogenase 0.9809 19 171 GO:0006635
GO:0008691
GO:0070403

Map